CsGy2G001320 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G001320
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Heavy metal transport/detoxification superfamily protein
Location	Gy14Chr2: 873656 .. 876558 (+)
RNA-Seq Expression	CsGy2G001320
Synteny	CsGy2G001320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAACTGGTGATGAGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGATTCTTCCACTTCCTGCAACTTATACAGATTGGAAATTGAAGACAGTAATAATTTTGATCAGAAACAGCCATTAATGCCCAAACAAACGACATCAACAACTCATGATCTTCTCGGATTCAAGGATGTGATTACTCATCAAAACGAAACTCTCCCTCTTCAGTTCAACCCCAAGGTCAGATCACATTCCTAACCCCCTTTTCTCCCTCCTCAATCTGCTTCTACTATTGACTCTTGGTTTTTAAACTTTAAATAATGGTTCTTTTTATTTTCTTTTAATCTTTTTCCTTTTTTTGTTCCATGTTATGTAATTTAATTTCGGTTTCTTTAACTTCAACTTTGATTTTTTTTTTTTTTGTCAATGTTTTTATTTTTTTCTATATGTTTAGTTCAGTTTGGTTTCTTTTCATGATGAAGATAGTAACTTTTTTAGATACCAAAATCATAATACGGAAGGTATAGTATACAGTTAGGTAACTCGAGTTTTCCTCGACTCTATACTATATATATACTATACAAGTACTATAATTAGCTAGCTTAACAATAAAAGAAATCATGAATTTGTTGCTTCATATAGACAAAAGTGAACCAATAAAAAAATAAAATAGTCGAAATAGACAAAAAGAACACAAAAACTAAAAGTATGAAGATCTAAATATTACTTTCATTTTTATATTTGGAAGTAATTACTTGTACTTGGACTTTCAATTCTCAAAATAAGTTAGATTCTATTTTTTGTGAGAAAAATTTATTAAGTTTGATTCAAATACATTCGCATGGATAACAAAAATTACAAAATTAAAACTTATTTTACATGTAGAAAACTTAATGAACCATTGAGAATTTAATAAGTTTTTGTTAGACTTATAAACATATATACTTTTTTATTTAAAAATGCAAAAAAAAAAAAGAAAAAGAACTTTGATGTTATCTATAAAATTTATTGAAAAATGTAAAACTAAAATTAAATGAGTATTAAATACAAGAACCACAATTAATTGCCTAAAAGAAAACAATTAGTTTAAATGCTTAGTTTGTCTTTGTTGTGTTTTAAATTAAAAATGTATATTCGTACGGAATAATTGGAGAAGAGTGAGTGAAAACTGGAAACAATTTCGGTAAGCTAAATAAGATTCCTATGCTATGTTTATCGTTTTCTATAATTTAAATTTTAGTGTACATTTGACCTATTGAATGAGGCAAAGAATGTAGATATTACATTCAAGTTAGTATTTTGAGGTAAAGTAGTAAGATTGAATTTCATGATAATTATAAAAAGTAAATTTTAAAAACTCGATTGAGTTACTTAATAAGTGAACACGTAAATTCACCTGTTTATTCAATTTATTTATATTAAAAAAGAATATCGATTAACTAAATTTAAAATTTATTAAAAATACAAAAACAAATTAATAAACTTCAAACTACATGAATCAATATGATATATTAACCTAAAAGTTGAGTTACTTTATAAATATGTTACATTTACTATCGAAGTTGAGTTGTTTATAGACAACGGTAACTTAAAACGTGATTAGCTTAAAACTTGATTTTTCCATAAAGTCTAAAAGAACAGTAAAACTTCACGTACCAACGTCTTTAAATTATATACGTTCAAATTTTATTATTTTTAAATTAAATAAAATCGCGTAGTAAATTGTACATTTTCATAAAAATTAAAGAAATTAATGTATATATATTATTTTGGATAATTGATTAGGTGGATTCTATAATGCATTTATCTACATGTATTCTTTTTTTTTTTTTTTTTTTGTATGTAATGAGTAGATGGTAAAACACATAAATAGATGTATACGAGATGCATTGTTGAAGCTTTTTCTTTTGGATTACCGCTCTGGGTTGTAAACAACCCGAGATTTTTCAGGTGGTGGTGGTGAGGGTGTCAATGCATTGCAATGGCTGTGCTAGAAGAGTTGAGAAACATATATCCAAGATACAAGGTATTTTTTTTTAATAGTAATTATTATTATTACAAGGGAAATTGTAAAAAATGACAAAATGTAAATAGTTTGTATTTTTTAAAATTTATTAAAAAATGCAAAACGTTGATGTAAATTTTATGAATAGTAATTAAGAATGTAATAACATTTTACAAAAGTTGTAAATATAACAAAATTTATCGATGATAGATTCTGATAGACCAATATTTACCACATAGTCGACTTTGACCAATTTTGTTATATTTGTAATTTTTTAAAAATATTTTACATATTTAATTATTTTGAATCTAATAGCTATATTTTGTAATAAAACGATTTTTTTTAAACTGTGTCCAGTACAATTTGATGGTTTTGAAATTTGGTTCAAATCCCCACATATATTGTTTCTACATCCCAATTTCGTTAATAAAACAGTCCATGAACTAAAAGATTTGTACAGCACCCATCAAACATGCTTAATCATCTAATAATGTTTTACGTAAATAACTATGTATATTTAATATCGTATTTACTAATAAAGTATGGAGATTGTATTAGATGGCAGAAAAACAAAAGTCACAAAAATAAAAAATCAAACTTATAGTACTTTTTTGTATATTACAAATTTGACATATTTTTAAATTTGTCATTTAAAAAATGTAGATGATGTGGACCATGTTATCATATTTTTTTTTGTTATTTTTGTAAACTCGCCAATAAAGTAGTTATCAAAATAAAATTTAAATCTAGGTTGTTTGTCTTATAATACTTGCTTTTAGGCGTGGAATCATGGAAGGTAGATATGGAAAGAGAGACTGTGGTTGTTACGGGAGATGTTTTTCCTTTTGAAGTTATGCAATGTATTTCTAAAGTGAAGAGTGTAGAGATTTTGGAGCCTCAGGTTTGA

mRNA sequence

ATGGGAAAACTGGTGATGAGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGATTCTTCCACTTCCTGCAACTTATACAGATTGGAAATTGAAGACAGTAATAATTTTGATCAGAAACAGCCATTAATGCCCAAACAAACGACATCAACAACTCATGATCTTCTCGGATTCAAGGATGTGATTACTCATCAAAACGAAACTCTCCCTCTTCAGTTCAACCCCAAGGTGGTGGTGGTGAGGGTGTCAATGCATTGCAATGGCTGTGCTAGAAGAGTTGAGAAACATATATCCAAGATACAAGGCGTGGAATCATGGAAGGTAGATATGGAAAGAGAGACTGTGGTTGTTACGGGAGATGTTTTTCCTTTTGAAGTTATGCAATGTATTTCTAAAGTGAAGAGTGTAGAGATTTTGGAGCCTCAGGTTTGA

Coding sequence (CDS)

ATGGGAAAACTGGTGATGAGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGATTCTTCCACTTCCTGCAACTTATACAGATTGGAAATTGAAGACAGTAATAATTTTGATCAGAAACAGCCATTAATGCCCAAACAAACGACATCAACAACTCATGATCTTCTCGGATTCAAGGATGTGATTACTCATCAAAACGAAACTCTCCCTCTTCAGTTCAACCCCAAGGTGGTGGTGGTGAGGGTGTCAATGCATTGCAATGGCTGTGCTAGAAGAGTTGAGAAACATATATCCAAGATACAAGGCGTGGAATCATGGAAGGTAGATATGGAAAGAGAGACTGTGGTTGTTACGGGAGATGTTTTTCCTTTTGAAGTTATGCAATGTATTTCTAAAGTGAAGAGTGTAGAGATTTTGGAGCCTCAGGTTTGA

Protein sequence

MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFKDVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV*

Homology

[Close]

BLAST of CsGy2G001320 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.5e-13
Identity = 34/68 (50.00%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 77  KVVVVRVSMHCN--GCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKV 136
           +VVV+RVS+HC+  GC  +V+KH+SK+QGV S+ +D   + V VTGD+ P EV+ C+SKV
Sbjct: 168 QVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLGCLSKV 227

Query: 137 KSVEILEP 143
           K+ +   P
Sbjct: 228 KNAQFWTP 235

[Close]

BLAST of CsGy2G001320 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-12
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 77  KVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKS 136
           +VVV+RVS+HC GCA +V+KH+SK++GV S+ +D   + V VTGDV P  V+  ISKVK+
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 137 VE 139
            +
Sbjct: 310 AQ 311

[Close]

BLAST of CsGy2G001320 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 77  KVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKS 136
           +VVV++VS+HC GC  +V KH++++QGV S+ +D   + V VTGD+ P E++  ISKVK+
Sbjct: 181 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKN 240

Query: 137 VE 139
            +
Sbjct: 241 AQ 242

[Close]

BLAST of CsGy2G001320 vs. ExPASy Swiss-Prot
Match: Q0WV37 (Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX=3702 GN=HIPP34 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 27/62 (43.55%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 80  VVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKV-KSVE 139
           V++V++HC GC  +V+K + KI+GV S K D+E+  V VTG++ P  +++ +SK  K  E
Sbjct: 13  VLKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDPALLVKKLSKSGKHAE 72

Query: 140 IL 141
           IL
Sbjct: 73  IL 74

[Close]

BLAST of CsGy2G001320 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 2.3e-06
Identity = 24/57 (42.11%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 77  KVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISK 134
           + VV+RV+M C GC   V++ + K++GVES+ VD++ + V V G+V P  V+Q ++K
Sbjct: 3   QTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTK 59

[Close]

BLAST of CsGy2G001320 vs. NCBI nr
Match: XP_031736582.1 (uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetical protein Csa_019330 [Cucumis sativus])

HSP 1 Score: 291 bits (746), Expect = 1.94e-99
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60
           MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK
Sbjct: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60

Query: 61  DVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTG 120
           DVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTG
Sbjct: 61  DVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTG 120

Query: 121 DVFPFEVMQCISKVKSVEILEPQV 144
           DVFPFEVMQCISKVKSVEILEPQV
Sbjct: 121 DVFPFEVMQCISKVKSVEILEPQV 144

[Close]

BLAST of CsGy2G001320 vs. NCBI nr
Match: XP_008458177.1 (PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo] >KAA0061568.1 copper-binding family protein [Cucumis melo var. makuwa])

HSP 1 Score: 258 bits (659), Expect = 3.85e-86
Identity = 133/145 (91.72%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MGKLVMSIGKVFSCFINTTDSS-TSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGF 60
           MGKLV+SIGKVFSCFINTTDSS TSC LYR EIEDSNNFDQKQPLM KQTTSTTHDLLGF
Sbjct: 1   MGKLVLSIGKVFSCFINTTDSSSTSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGF 60

Query: 61  KDVITHQNETL-PLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVV 120
           KDVITHQN+TL PLQFNPKVV+VRVSMHCNGCARRVEK ISKIQGVESWKVDMERE VVV
Sbjct: 61  KDVITHQNKTLRPLQFNPKVVMVRVSMHCNGCARRVEKLISKIQGVESWKVDMERERVVV 120

Query: 121 TGDVFPFEVMQCISKVKSVEILEPQ 143
           TGDVFPFEVM+CISKVKSVEILE Q
Sbjct: 121 TGDVFPFEVMECISKVKSVEILESQ 145

[Close]

BLAST of CsGy2G001320 vs. NCBI nr
Match: XP_022946348.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 155 bits (392), Expect = 1.03e-45
Identity = 90/143 (62.94%), Postives = 108/143 (75.52%), Query Frame = 0


Query: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60
           MGK V  IGKVFSCF+N+  +S+SC     +IE +  F+ KQPLMP Q  S    LL   
Sbjct: 1   MGKAV-GIGKVFSCFMNS-GASSSC----FQIEAT--FEPKQPLMPNQPNS---HLLRLN 60

Query: 61  DVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTG 120
           DVI+H N+    Q NPKVV +RVSMHCNGCARRVEK+I KI+GV+S+KVD ER+TVVVTG
Sbjct: 61  DVISHTNQ----QANPKVVELRVSMHCNGCARRVEKNIGKIEGVDSYKVDFERKTVVVTG 120

Query: 121 DVFPFEVMQCISKVKSVEILEPQ 143
           DV  FEV+QC+SKV+SVEILEPQ
Sbjct: 121 DVSSFEVIQCVSKVRSVEILEPQ 128

[Close]

BLAST of CsGy2G001320 vs. NCBI nr
Match: XP_022999545.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 155 bits (392), Expect = 1.03e-45
Identity = 92/143 (64.34%), Postives = 107/143 (74.83%), Query Frame = 0


Query: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60
           MGK V  IGKVFSCF+N+  SS SC     EIE +  F+ KQPLMP Q  S    LL F 
Sbjct: 1   MGKAV-GIGKVFSCFMNSRASS-SC----FEIEGT--FEPKQPLMPNQPNS---HLLRFN 60

Query: 61  DVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTG 120
           DVI+H N+    Q NPKVV +RVSMHCNGCARRVEK+I KI+GV+S+KVD ER+TVVVTG
Sbjct: 61  DVISHTNQ----QTNPKVVELRVSMHCNGCARRVEKNIGKIEGVDSFKVDFERKTVVVTG 120

Query: 121 DVFPFEVMQCISKVKSVEILEPQ 143
           DV  FEV+QC+SKV+SVEILE Q
Sbjct: 121 DVSSFEVIQCVSKVRSVEILEHQ 128

[Close]

BLAST of CsGy2G001320 vs. NCBI nr
Match: KAG7030420.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 155 bits (392), Expect = 1.03e-45
Identity = 90/143 (62.94%), Postives = 108/143 (75.52%), Query Frame = 0


Query: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60
           MGK V  IGKVFSCF+N+  +S+SC     +IE +  F+ KQPLMP Q  S    LL   
Sbjct: 1   MGKAV-GIGKVFSCFMNS-GASSSC----FQIEAT--FEPKQPLMPNQPNS---HLLRLN 60

Query: 61  DVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTG 120
           DVI+H N+    Q NPKVV +RVSMHCNGCARRVEK+I KI+GV+S+KVD ER+TVVVTG
Sbjct: 61  DVISHTNQ----QTNPKVVELRVSMHCNGCARRVEKNIGKIEGVDSYKVDFERKTVVVTG 120

Query: 121 DVFPFEVMQCISKVKSVEILEPQ 143
           DV  FEV+QC+SKV+SVEILEPQ
Sbjct: 121 DVSSFEVIQCVSKVRSVEILEPQ 128

[Close]

BLAST of CsGy2G001320 vs. ExPASy TrEMBL
Match: A0A5A7V1Y2 (Copper-binding family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001300 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 1.86e-86
Identity = 133/145 (91.72%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MGKLVMSIGKVFSCFINTTDSS-TSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGF 60
           MGKLV+SIGKVFSCFINTTDSS TSC LYR EIEDSNNFDQKQPLM KQTTSTTHDLLGF
Sbjct: 1   MGKLVLSIGKVFSCFINTTDSSSTSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGF 60

Query: 61  KDVITHQNETL-PLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVV 120
           KDVITHQN+TL PLQFNPKVV+VRVSMHCNGCARRVEK ISKIQGVESWKVDMERE VVV
Sbjct: 61  KDVITHQNKTLRPLQFNPKVVMVRVSMHCNGCARRVEKLISKIQGVESWKVDMERERVVV 120

Query: 121 TGDVFPFEVMQCISKVKSVEILEPQ 143
           TGDVFPFEVM+CISKVKSVEILE Q
Sbjct: 121 TGDVFPFEVMECISKVKSVEILESQ 145

[Close]

BLAST of CsGy2G001320 vs. ExPASy TrEMBL
Match: A0A1S3C8H9 (uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 1.86e-86
Identity = 133/145 (91.72%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MGKLVMSIGKVFSCFINTTDSS-TSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGF 60
           MGKLV+SIGKVFSCFINTTDSS TSC LYR EIEDSNNFDQKQPLM KQTTSTTHDLLGF
Sbjct: 1   MGKLVLSIGKVFSCFINTTDSSSTSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGF 60

Query: 61  KDVITHQNETL-PLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVV 120
           KDVITHQN+TL PLQFNPKVV+VRVSMHCNGCARRVEK ISKIQGVESWKVDMERE VVV
Sbjct: 61  KDVITHQNKTLRPLQFNPKVVMVRVSMHCNGCARRVEKLISKIQGVESWKVDMERERVVV 120

Query: 121 TGDVFPFEVMQCISKVKSVEILEPQ 143
           TGDVFPFEVM+CISKVKSVEILE Q
Sbjct: 121 TGDVFPFEVMECISKVKSVEILESQ 145

[Close]

BLAST of CsGy2G001320 vs. ExPASy TrEMBL
Match: A0A0A0LIU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005290 PE=4 SV=1)

HSP 1 Score: 160 bits (405), Expect = 1.23e-48
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60
          MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK
Sbjct: 1  MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60

Query: 61 DVITHQNETLPLQFNPK 77
          DVITHQNETLPLQFNPK
Sbjct: 61 DVITHQNETLPLQFNPK 77

[Close]

BLAST of CsGy2G001320 vs. ExPASy TrEMBL
Match: A0A6J1KFP0 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493873 PE=4 SV=1)

HSP 1 Score: 155 bits (392), Expect = 4.97e-46
Identity = 92/143 (64.34%), Postives = 107/143 (74.83%), Query Frame = 0


Query: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60
           MGK V  IGKVFSCF+N+  SS SC     EIE +  F+ KQPLMP Q  S    LL F 
Sbjct: 1   MGKAV-GIGKVFSCFMNSRASS-SC----FEIEGT--FEPKQPLMPNQPNS---HLLRFN 60

Query: 61  DVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTG 120
           DVI+H N+    Q NPKVV +RVSMHCNGCARRVEK+I KI+GV+S+KVD ER+TVVVTG
Sbjct: 61  DVISHTNQ----QTNPKVVELRVSMHCNGCARRVEKNIGKIEGVDSFKVDFERKTVVVTG 120

Query: 121 DVFPFEVMQCISKVKSVEILEPQ 143
           DV  FEV+QC+SKV+SVEILE Q
Sbjct: 121 DVSSFEVIQCVSKVRSVEILEHQ 128

[Close]

BLAST of CsGy2G001320 vs. ExPASy TrEMBL
Match: A0A6J1G3J1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450448 PE=4 SV=1)

HSP 1 Score: 155 bits (392), Expect = 4.97e-46
Identity = 90/143 (62.94%), Postives = 108/143 (75.52%), Query Frame = 0


Query: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60
           MGK V  IGKVFSCF+N+  +S+SC     +IE +  F+ KQPLMP Q  S    LL   
Sbjct: 1   MGKAV-GIGKVFSCFMNS-GASSSC----FQIEAT--FEPKQPLMPNQPNS---HLLRLN 60

Query: 61  DVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTG 120
           DVI+H N+    Q NPKVV +RVSMHCNGCARRVEK+I KI+GV+S+KVD ER+TVVVTG
Sbjct: 61  DVISHTNQ----QANPKVVELRVSMHCNGCARRVEKNIGKIEGVDSYKVDFERKTVVVTG 120

Query: 121 DVFPFEVMQCISKVKSVEILEPQ 143
           DV  FEV+QC+SKV+SVEILEPQ
Sbjct: 121 DVSSFEVIQCVSKVRSVEILEPQ 128

[Close]

BLAST of CsGy2G001320 vs. TAIR 10
Match: AT3G24450.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 2.8e-20
Identity = 54/141 (38.30%), Postives = 87/141 (61.70%), Query Frame = 0


Query: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLE-IEDSNNFDQKQPLMPKQTTSTTHDLLGF 60
           MGKL   IG+V+ C    T+    C+ + L  + D     +K+PL+   +T  +  ++  
Sbjct: 1   MGKL-QKIGRVWDCLFLPTN---QCSCFCLNTLGDEEEEFEKEPLI-DSSTEKSGKVMRL 60

Query: 61  KDVI-THQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVV 120
           KDV+     +TL     PK+V ++VSMHC GCA++VEKHISK+ GV  +KV++E + VVV
Sbjct: 61  KDVVAADHRQTLAFHLKPKIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVV 120

Query: 121 TGDVFPFEVMQCISKVKSVEI 140
            G++ P +V++ I KVK+ ++
Sbjct: 121 KGNILPVDVLESICKVKNAQL 136

[Close]

BLAST of CsGy2G001320 vs. TAIR 10
Match: AT3G53530.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 74.7 bits (182), Expect = 6.8e-14
Identity = 34/68 (50.00%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 77  KVVVVRVSMHCN--GCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKV 136
           +VVV+RVS+HC+  GC  +V+KH+SK+QGV S+ +D   + V VTGD+ P EV+ C+SKV
Sbjct: 168 QVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLGCLSKV 227

Query: 137 KSVEILEP 143
           K+ +   P
Sbjct: 228 KNAQFWTP 235

[Close]

BLAST of CsGy2G001320 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 8.8e-14
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 77  KVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKS 136
           +VVV+RVS+HC GCA +V+KH+SK++GV S+ +D   + V VTGDV P  V+  ISKVK+
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 137 VE 139
            +
Sbjct: 310 AQ 311

[Close]

BLAST of CsGy2G001320 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 8.8e-14
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 77  KVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKS 136
           +VVV+RVS+HC GCA +V+KH+SK++GV S+ +D   + V VTGDV P  V+  ISKVK+
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 137 VE 139
            +
Sbjct: 310 AQ 311

[Close]

BLAST of CsGy2G001320 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 71.2 bits (173), Expect = 7.5e-13
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 77  KVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKS 136
           +VVV++VS+HC GC  +V KH++++QGV S+ +D   + V VTGD+ P E++  ISKVK+
Sbjct: 181 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKN 240

Query: 137 VE 139
            +
Sbjct: 241 AQ 242

The following BLAST results are available for this feature:

BLAST of CsGy2G001320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXH8	9.5e-13	50.00	Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q8LDS4	1.2e-12	53.23	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q58FZ0	1.1e-11	46.77	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q0WV37	1.3e-06	43.55	Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX...	[more]
Q94BT9	2.3e-06	42.11	Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2	[more]

BLAST of CsGy2G001320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736582.1	1.94e-99	100.00	uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetica...	[more]
XP_008458177.1	3.85e-86	91.72	PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo] >KAA0061568.1 cop...	[more]
XP_022946348.1	1.03e-45	62.94	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022999545.1	1.03e-45	64.34	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima]	[more]
KAG7030420.1	1.03e-45	62.94	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of CsGy2G001320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V1Y2	1.86e-86	91.72	Copper-binding family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3C8H9	1.86e-86	91.72	uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=...	[more]
A0A0A0LIU8	1.23e-48	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005290 PE=4 SV=1	[more]
A0A6J1KFP0	4.97e-46	64.34	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita maxima OX...	[more]
A0A6J1G3J1	4.97e-46	62.94	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita moschata ...	[more]

BLAST of CsGy2G001320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24450.1	2.8e-20	38.30	Heavy metal transport/detoxification superfamily protein	[more]
AT3G53530.1	6.8e-14	50.00	Chloroplast-targeted copper chaperone protein	[more]
AT5G02600.2	8.8e-14	53.23	Heavy metal transport/detoxification superfamily protein	[more]
AT5G02600.1	8.8e-14	53.23	Heavy metal transport/detoxification superfamily protein	[more]
AT2G37390.1	7.5e-13	46.77	Chloroplast-targeted copper chaperone protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 80..124 e-value: 3.6E-13 score: 49.7
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 77..144 score: 11.944114
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 85..122 e-value: 3.70379E-11 score: 53.3785
None	No IPR available	GENE3D	3.30.70.100		coord: 75..138 e-value: 6.3E-17 score: 63.6
None	No IPR available	PANTHER	PTHR46119:SF11	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 9..141
IPR044526	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3	PANTHER	PTHR46119	OS08G0405700 PROTEIN	coord: 9..141
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 77..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G001320.2	CsGy2G001320.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding