CsGy2G000840 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G000840
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	E3 ubiquitin-protein ligase RNF181-like
Location	Gy14Chr2: 522000 .. 522615 (+)
RNA-Seq Expression	CsGy2G000840
Synteny	CsGy2G000840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATCGATAAAAGAAAAAATAAACAAATACTGATCTCCATGGCTACATCAGCTAATTATGCAGCAAGTTACATCATGGACATTGAATCAATGTTCGATCTCGACACAGTCCTCACCGGAGCCGATGACTTCTATTACTTCCACACCGTTGTAGCGCCACCACCCGTGATGGTTGCTGAATTACCGACAGTGGCTGCAGCGGACGATGTATGTGCGGTTTGTATGGAGGATTTTCTGCCGGATGAAGGCGGTAAGCAGATCCCATGTGGCCATGTGTACCATCAATCTTGCTTATCGTCTTGGCTCTCTATCCGCGACTCTTGCCCTCTCTGCCGTTGTCATATCGCCCCCGGTGACAAAACGGAGACGTCCAAAACCGTACAAGTTTAGTTTGGTTTTGTGCTAGATTTGAATATGAAATTTGGAATTCGGCTATCATTCAATCAAAATGTGGTAAAGATTCAAAAACTCACGTTTTGAACAACTTGTGTATTCGATTCGACGATTATTAAGAGCAAACAAGTTCTGGATGTGTATATTGTTCTAACGATCTCATGACAGTAATAATAATATATGATTGTTATAAGAACTTTATGGAATGAACTTTCCTTCACTG

mRNA sequence

CAAATCGATAAAAGAAAAAATAAACAAATACTGATCTCCATGGCTACATCAGCTAATTATGCAGCAAGTTACATCATGGACATTGAATCAATGTTCGATCTCGACACAGTCCTCACCGGAGCCGATGACTTCTATTACTTCCACACCGTTGTAGCGCCACCACCCGTGATGGTTGCTGAATTACCGACAGTGGCTGCAGCGGACGATGTATGTGCGGTTTGTATGGAGGATTTTCTGCCGGATGAAGGCGGTAAGCAGATCCCATGTGGCCATGTGTACCATCAATCTTGCTTATCGTCTTGGCTCTCTATCCGCGACTCTTGCCCTCTCTGCCGTTGTCATATCGCCCCCGGTGACAAAACGGAGACGTCCAAAACCGTACAAGTTTAGTTTGGTTTTGTGCTAGATTTGAATATGAAATTTGGAATTCGGCTATCATTCAATCAAAATGTGGTAAAGATTCAAAAACTCACGTTTTGAACAACTTGTGTATTCGATTCGACGATTATTAAGAGCAAACAAGTTCTGGATGTGTATATTGTTCTAACGATCTCATGACAGTAATAATAATATATGATTGTTATAAGAACTTTATGGAATGAACTTTCCTTCACTG

Coding sequence (CDS)

ATGGCTACATCAGCTAATTATGCAGCAAGTTACATCATGGACATTGAATCAATGTTCGATCTCGACACAGTCCTCACCGGAGCCGATGACTTCTATTACTTCCACACCGTTGTAGCGCCACCACCCGTGATGGTTGCTGAATTACCGACAGTGGCTGCAGCGGACGATGTATGTGCGGTTTGTATGGAGGATTTTCTGCCGGATGAAGGCGGTAAGCAGATCCCATGTGGCCATGTGTACCATCAATCTTGCTTATCGTCTTGGCTCTCTATCCGCGACTCTTGCCCTCTCTGCCGTTGTCATATCGCCCCCGGTGACAAAACGGAGACGTCCAAAACCGTACAAGTTTAG

Protein sequence

MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV*

Homology

[Close]

BLAST of CsGy2G000840 vs. ExPASy Swiss-Prot
Match: Q9Y4L5 (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 3.2e-11
Identity = 30/85 (35.29%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 40  PPPV---MVAELPTVAAADD------VCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLS 99
           PPP     +  LPTV    +       C VC ED+  +E  +Q+PC H +H SC+  WL 
Sbjct: 201 PPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLE 260

Query: 100 IRDSCPLCRCHIAPGDKTETSKTVQ 116
           + D+CP+CR  +   D T  S++ +
Sbjct: 261 LHDTCPVCRKSLNGEDSTRQSQSTE 285

[Close]

BLAST of CsGy2G000840 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.4e-11
Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 58  CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQ 116
           CAVCM+DF      KQ+PC H+YH+ CL  WL + +SCP+CR H  P D  +  + V+
Sbjct: 224 CAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCR-HELPTDDPDYERRVR 280

[Close]

BLAST of CsGy2G000840 vs. ExPASy Swiss-Prot
Match: Q9D0C1 (E3 ubiquitin-protein ligase RNF115 OS=Mus musculus OX=10090 GN=Rnf115 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 29/83 (34.94%), Postives = 44/83 (53.01%), Query Frame = 0


Query: 40  PPPV---MVAELPTVAAADD------VCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLS 99
           PPP     +  LPTV    +       C VC ED+  +E  +Q+PC H +H SC+  WL 
Sbjct: 202 PPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLE 261

Query: 100 IRDSCPLCRCHIAPGDKTETSKT 114
           + D+CP+CR  +   D T  +++
Sbjct: 262 LHDTCPVCRKSLNGEDSTRQTQS 284

[Close]

BLAST of CsGy2G000840 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-10
Identity = 29/66 (43.94%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 48  LPTVAAADDV-------CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC 107
           LPTV    D+       CAVCM++F      KQ+PC HV+HQ CL  WL + +SCP+CR 
Sbjct: 199 LPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRF 258

[Close]

BLAST of CsGy2G000840 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-10
Identity = 27/70 (38.57%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 36  TVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIP-CGHVYHQSCLSSWLSIRDS 95
           TV+   P+ V  + T  +  + C+VC+ +F  D+ G+ +P CGHV+H  C+ +W   R S
Sbjct: 91  TVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSS 150

Query: 96  CPLCRCHIAP 105
           CPLCR  + P
Sbjct: 151 CPLCRAPVQP 160

[Close]

BLAST of CsGy2G000840 vs. NCBI nr
Match: XP_011650093.1 (E3 ubiquitin-protein ligase RNF115 [Cucumis sativus])

HSP 1 Score: 245 bits (625), Expect = 6.86e-82
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60
           MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV
Sbjct: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116
           CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV
Sbjct: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116

[Close]

BLAST of CsGy2G000840 vs. NCBI nr
Match: KAE8651508.1 (hypothetical protein Csa_019333 [Cucumis sativus])

HSP 1 Score: 239 bits (611), Expect = 1.31e-79
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60
           MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV
Sbjct: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKT 113
           CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKT
Sbjct: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKT 113

[Close]

BLAST of CsGy2G000840 vs. NCBI nr
Match: KAA0061529.1 (RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa])

HSP 1 Score: 218 bits (554), Expect = 4.51e-71
Identity = 103/116 (88.79%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60
           MATSAN+AA YIMDIESMFDLDTVL+GADDFYYFHT VAPPPV+VA+LPTVA  DD CAV
Sbjct: 1   MATSANHAARYIMDIESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVAT-DDACAV 60

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116
           CMEDFLPDEGGKQIPCGHVYHQSC+SSWLS+ DSCPLCR HIAPGDKTETSKTVQV
Sbjct: 61  CMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 115

[Close]

BLAST of CsGy2G000840 vs. NCBI nr
Match: XP_038877426.1 (E3 ubiquitin-protein ligase RNF126-like [Benincasa hispida])

HSP 1 Score: 185 bits (469), Expect = 8.64e-58
Identity = 90/114 (78.95%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 3   TSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCM 62
           T++ YAASYIMDIESMFDLDTVLTGADDFYY  TVVAPPPV+VA+LPTVA  D VCAVC+
Sbjct: 8   TTSAYAASYIMDIESMFDLDTVLTGADDFYYNKTVVAPPPVVVADLPTVAGKD-VCAVCI 67

Query: 63  EDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116
           EDFLPDE GKQIPCGHVYHQSCLSSWLS+ DSCPLCR HIA  ++ E  KT  V
Sbjct: 68  EDFLPDESGKQIPCGHVYHQSCLSSWLSVGDSCPLCRRHIASDEEMEAPKTETV 120

[Close]

BLAST of CsGy2G000840 vs. NCBI nr
Match: XP_023537996.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174 bits (441), Expect = 9.26e-54
Identity = 80/115 (69.57%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 2   ATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVC 61
           AT + +AASYIMD+ESMFDLDTVLTGADD+Y    +  PP V+VA+LPTV   DDVCAVC
Sbjct: 8   ATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQIITEPPSVVVADLPTVVT-DDVCAVC 67

Query: 62  MEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116
           ME+F  DEGGKQIPCGHVYHQ+C+SSWLS+ D CPLCRCH++  +K+ET+K VQV
Sbjct: 68  MEEFRADEGGKQIPCGHVYHQTCISSWLSVGDCCPLCRCHVSSDNKSETAKPVQV 121

[Close]

BLAST of CsGy2G000840 vs. ExPASy TrEMBL
Match: A0A0A0LEZ1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000920 PE=4 SV=1)

HSP 1 Score: 245 bits (625), Expect = 3.32e-82
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60
           MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV
Sbjct: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116
           CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV
Sbjct: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116

[Close]

BLAST of CsGy2G000840 vs. ExPASy TrEMBL
Match: A0A5A7V793 (RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00900 PE=4 SV=1)

HSP 1 Score: 218 bits (554), Expect = 2.18e-71
Identity = 103/116 (88.79%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60
           MATSAN+AA YIMDIESMFDLDTVL+GADDFYYFHT VAPPPV+VA+LPTVA  DD CAV
Sbjct: 1   MATSANHAARYIMDIESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVAT-DDACAV 60

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116
           CMEDFLPDEGGKQIPCGHVYHQSC+SSWLS+ DSCPLCR HIAPGDKTETSKTVQV
Sbjct: 61  CMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 115

[Close]

BLAST of CsGy2G000840 vs. ExPASy TrEMBL
Match: A0A6J1HNM2 (E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita maxima OX=3661 GN=LOC111465331 PE=4 SV=1)

HSP 1 Score: 170 bits (431), Expect = 1.55e-52
Identity = 80/116 (68.97%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 2   ATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPP-VMVAELPTVAAADDVCAV 61
           AT + +AASYIMD+ESMFDLDTVLTGADD+Y    ++  PP V+V++LPTV   DDVCAV
Sbjct: 8   ATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVT-DDVCAV 67

Query: 62  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116
           CME+F  DEGGKQIPCGHVYHQSC+SSWLS+ D CPLCRCH++  +K ET+K VQV
Sbjct: 68  CMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDNKLETTKPVQV 122

[Close]

BLAST of CsGy2G000840 vs. ExPASy TrEMBL
Match: A0A6J1FDN7 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111444430 PE=4 SV=1)

HSP 1 Score: 167 bits (424), Expect = 1.80e-51
Identity = 79/116 (68.10%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 2   ATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVC 61
           AT + +AA YIMD+ESMFDLDTVLTGADD+Y    +  PP V+VA+LPTV   DDVCAVC
Sbjct: 8   ATRSAFAARYIMDLESMFDLDTVLTGADDYYNDQIITEPPSVVVADLPTVVT-DDVCAVC 67

Query: 62  MEDFLPDEGGKQIPCGHVYHQSCLSSWLSIR-DSCPLCRCHIAPGDKTETSKTVQV 116
           ME+F  DEGGKQIPCGHVYHQ+C+SSWLS+  D CPLCRCH++  +K+ET+K VQV
Sbjct: 68  MEEFRADEGGKQIPCGHVYHQTCISSWLSVGGDCCPLCRCHVSSDNKSETAKPVQV 122

[Close]

BLAST of CsGy2G000840 vs. ExPASy TrEMBL
Match: A0A6J1G511 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111450796 PE=4 SV=1)

HSP 1 Score: 123 bits (309), Expect = 5.08e-34
Identity = 64/112 (57.14%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 3   TSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCM 62
           T+ N AA+Y   IE +FDLD VL+GADDF      ++    +VA+LPTV A  DVCAVC+
Sbjct: 10  TTRNLAAAY--PIEFLFDLDMVLSGADDFGCCQ--ISASDSLVADLPTVVA--DVCAVCL 69

Query: 63  EDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTV 114
           EDF PDE GKQIPCGHVYH+SC+SSWL++ + CPLCRC IA       S T+
Sbjct: 70  EDFRPDEDGKQIPCGHVYHESCISSWLAVANCCPLCRCLIAGQPPESPSSTL 115

[Close]

BLAST of CsGy2G000840 vs. TAIR 10
Match: AT3G02340.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 33/103 (32.04%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 6   NYAASYIMD--IESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCME 65
           N++  Y  D  +  MFD +T + G        +V+   PV+   +  +   ++VCAVC +
Sbjct: 283 NHSGHYDADAILGQMFDDETGIRGNPP--AAKSVIQDLPVVELAVEELDKGNNVCAVCKD 342

Query: 66  DFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGD 107
           + L +E  +++PC H YH  C+  WL IR++CP+CR  +   D
Sbjct: 343 EMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPTDD 383

[Close]

BLAST of CsGy2G000840 vs. TAIR 10
Match: AT1G68180.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 38  VAPPPV---MVAELPTVAAADD------VCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSW 97
           + PPP     +  + TV   D+      VCA+C E+F   E GK++ C H+YH SC+ SW
Sbjct: 109 IGPPPASQSAIEAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSW 168

Query: 98  LSIRDSCPLCRCHIAPG 106
           L+I ++CP+CR  +  G
Sbjct: 169 LNIHNTCPICRFEVNLG 185

[Close]

BLAST of CsGy2G000840 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 29/66 (43.94%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 48  LPTVAAADDV-------CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC 107
           LPTV    D+       CAVCM++F      KQ+PC HV+HQ CL  WL + +SCP+CR 
Sbjct: 199 LPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRF 258

[Close]

BLAST of CsGy2G000840 vs. TAIR 10
Match: AT4G26400.2 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 25/69 (36.23%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 44  MVAELPTVAAADDV-CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHI 103
           +V  LPTV  ++ + C++C++DF      K++PC H +H  C+  WL +  SCP+CR  +
Sbjct: 226 VVDNLPTVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285

Query: 104 APGDKTETS 112
            P D+T+ +
Sbjct: 286 PPDDETKVN 294

[Close]

BLAST of CsGy2G000840 vs. TAIR 10
Match: AT4G26400.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 25/69 (36.23%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 44  MVAELPTVAAADDV-CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHI 103
           +V  LPTV  ++ + C++C++DF      K++PC H +H  C+  WL +  SCP+CR  +
Sbjct: 226 VVDNLPTVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285

Query: 104 APGDKTETS 112
            P D+T+ +
Sbjct: 286 PPDDETKVN 294

The following BLAST results are available for this feature:

BLAST of CsGy2G000840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y4L5	3.2e-11	35.29	E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2	[more]
P0CH30	9.4e-11	46.55	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q9D0C1	1.6e-10	34.94	E3 ubiquitin-protein ligase RNF115 OS=Mus musculus OX=10090 GN=Rnf115 PE=1 SV=1	[more]
Q8LPN7	2.1e-10	43.94	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9LZJ6	4.7e-10	38.57	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]

BLAST of CsGy2G000840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650093.1	6.86e-82	100.00	E3 ubiquitin-protein ligase RNF115 [Cucumis sativus]	[more]
KAE8651508.1	1.31e-79	100.00	hypothetical protein Csa_019333 [Cucumis sativus]	[more]
KAA0061529.1	4.51e-71	88.79	RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa]	[more]
XP_038877426.1	8.64e-58	78.95	E3 ubiquitin-protein ligase RNF126-like [Benincasa hispida]	[more]
XP_023537996.1	9.26e-54	69.57	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy2G000840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEZ1	3.32e-82	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000920 P...	[more]
A0A5A7V793	2.18e-71	88.79	RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A6J1HNM2	1.55e-52	68.97	E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita maxima OX=3661 GN=LOC111465...	[more]
A0A6J1FDN7	1.80e-51	68.10	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1G511	5.08e-34	57.14	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of CsGy2G000840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02340.1	1.1e-11	32.04	RING/U-box superfamily protein	[more]
AT1G68180.1	1.5e-11	38.96	RING/U-box superfamily protein	[more]
AT3G19950.1	1.5e-11	43.94	RING/U-box superfamily protein	[more]
AT4G26400.2	1.5e-11	36.23	RING/U-box superfamily protein	[more]
AT4G26400.1	1.5e-11	36.23	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 57..99 e-value: 0.01 score: 7.2
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 58..98 e-value: 5.4E-8 score: 42.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 57..99 e-value: 2.0E-12 score: 47.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 58..99 score: 12.828597
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 48..115 e-value: 2.3E-18 score: 67.1
None	No IPR available	PANTHER	PTHR15710:SF74	E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE	coord: 15..103
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 15..103
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 48..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G000840.1	CsGy2G000840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding