CsGy2G000290 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G000290
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ribosomal protein L18ae family
Location	Gy14Chr2: 185940 .. 188520 (-)
RNA-Seq Expression	CsGy2G000290
Synteny	CsGy2G000290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCATCTACAAATAGAGAGAGTTATGGTGGTTGATATGTAAAAAAGAACTAAAAAGGAAAATTTTTAATTTCGAGGGCTGTTCGTTATTTTTCAAGTCTCACAACACAAACAAGCCAAGGGAGTCAATTTTCTCAGCTTTTAGGTGATGAGAGATGAAGTCGATCGTTGCTTGACGTTTAAATTTCCTGCTTTGTTTAAGGAAAGCGTGTTCTTTCGTTAATTCATACGCCAATTCCATCTTTGATCCGTCCAAAGCCACAGAAATTGCCGTTTCACTCGTTTCCATCCATCCACTCATCTATTCATCTGTTTCGGTATTTTTCTTCTCTGATTCTTCTTTACTGTTCCATTTTCCTCACGTTTTTTGCTGCTTCTGCTCAATTTCTCTGCTCTTACTGCTTTAATTCGAGTCTATAGTAGCTTCTTCTTTGATTTCTCTGTTGTTTTGCTCTGTAATTGATGGATATTCGGGGAACTGTCCCTTCATTTGTGGATGATGACAAGACGGCGATTGTATCCACGATCTAGCTTTCTTTTGGTTACTACTGGGTTTGGAGTTTCGGATTTTTGGCAGCTGAAGAAGTCACTAATTCTATTCTTTTCCCTTTCTGCTGAGAATTATCCACTTATCTTTTATTCTTGACTTTGGCGTGGGAATATGGCTACGATTCATGAAGTCTAGTTTTGGTCAAGCTAGGTTACCTATTCATCTGACGGCTTTTGGAAGATTGAAAAGTTCCATAAGGTCGTTGTGCTCAACTGAACTAGTGTTTTATTAACATGAGGTTTAATGAACTAATTGGTATACGAATATTGGATTGTTTAGAGGTATTTGGAATGTAAATACCAAACTTAGGTAAATTTTCAATCCAGTTTCAATCTTCTGTTTGCCGCATTTGAAGAATATATAGCTATCTTGTTGGGTGTCTTTCCTTCAGACTTCTGAGTAGATTTTGATCTTTGACACAGGTTTACAAAGTGGATACTGCGAATTCTAAGAGTTCATTCTTCCATAAACACCGGCTTCAGCATGGATCCAAGTAACTTAATTCTTCTTATAACTTGGGTTGCTCATGATATCACTTACGGTTGGGGGCATAACCTAAAATTTAAAAAGAAGAAAAGCATGACTATGTATATTGGGTGCATTAGATGATTTTATTTGTGAGTTTGTAGCATGGTTCTTACTTAAGTAATTTATTTGATCTTGAGATTCTTTAGGTGTCTTGGACATCCATACATGCCTATACTCATTTTTTATGCTTTCACTGCATGGTTATACTTTTTATTGAAGAATCTGGGCACATTCAGAGTTTTAAGCTTGTTGATTTAGTGTCCGTCCTTTTATGATACACGTTTGCGGTCTTTGTCAAACCAATAATACACATTGAACTGTAAATAGTTTTTACGAAATAGTTGGAACGATTACTTGAGTTGTGAACATGTTTTGGCGATGTTACAGATGGAAAAATGGACCAGACGGTGCAACTGGTGAAATCGGTCTCTGATAAGCATCTTGATCTTTTGAGGCCATCTGCCCGAATTTGTTCAATATTCAAAGGTAAGTCGGGAATAAAAAGAGACATTTATGATATATGATGCATATATTATTACCTTGTATTGGTGGCTCTTTAATGAAATTATTTTTCGTAAAAAAAAAAAAAAGGAATGAAATTAGTTGAACCATTTTTAAAATGCCTTTATATTATAAAGGACGCATTGCCACGCCACATTCCTGTGGAATTTCTGAAATCGATAGGGGTTTCGTTTTTTATTGCTCCATTATGAGGGAAGGTTGAGATGATATTTAATAGCGTCATTTTCTTTGCTACTCGACGGTGTATGGTCTTGATGGTAGGGGTTTATCACTCCGGTAGTCCATTTTCTTTGTACTTACCTATGAATTACAGAAATCTCTTAAGATTTTTTCAATTGGAGATGTTGATTACGAGTGTCTTTTGCTTGTATATTCATCTATGCTCAAAATGGTTGATAATACACCTAGGCCAAGGAAAAGATGCTCCAGACCACATAAGGAGCAAATACACACTTCTCAGAGATGTAGAGGATGCTCAAGTAGGGCTATATGACAAGCCTCTCCCGTGTTTTGGCTGCGGAATAGGATGGTTTTCGTGAGTATTATGAAACTCTCTCGTCTACTTACATTTCATGGAACGTCTATCTTTGCCTACGTCCAGTTTTTCGAGTTTCCTAATTTTACCTTTGTATCTGTCTTTCCATTCAGTTTCCTCCTGGGGTTTTTTTTCCCATTGCTGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCTCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCGTCTGCCATTGCTGTAAGTGACTCCTCCGTTTCTCCCAGTCCCTACCCATAATAAAGAAAGGAAAGAAGAAGAAACAAACATAACTGACATCAATTCTTACATCTTCGCCATTTATTATGAGTTCGTCGAATATGATTGAGTTTTCTGAAGAAGCAAAAAATGTTGAAATGTTGCAGGCACTTGCATGTTCAATCCTCTTGTTAATCGTGGTAGCTGTTCTTCTATGA

mRNA sequence

ATGGCCTCATCTACAAATAGAGAGAGTTATGGAAAGCGTGTTCTTTCGTTAATTCATACGCCAATTCCATCTTTGATCCGTCCAAAGCCACAGAAATTGCCGTTTCACTCGTTTCCATCCATCCACTCATCTATTCATCTGTTTCGGTTTACAAAGTGGATACTGCGAATTCTAAGAGTTCATTCTTCCATAAACACCGGCTTCAGCATGGATCCAAATGGAAAAATGGACCAGACGGTGCAACTGGTGAAATCGGTCTCTGATAAGCATCTTGATCTTTTGAGGCCATCTGCCCGAATTTGTTCAATATTCAAAGGCCAAGGAAAAGATGCTCCAGACCACATAAGGAGCAAATACACACTTCTCAGAGATGTAGAGGATGCTCAAGTAGGGCTATATGACAAGCCTCTCCCGTGTTTTGGCTGCGGAATAGGATGGTTTTCTTTCCTCCTGGGGTTTTTTTTCCCATTGCTGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCTCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCGTCTGCCATTGCTGCACTTGCATGTTCAATCCTCTTGTTAATCGTGGTAGCTGTTCTTCTATGA

Coding sequence (CDS)

ATGGCCTCATCTACAAATAGAGAGAGTTATGGAAAGCGTGTTCTTTCGTTAATTCATACGCCAATTCCATCTTTGATCCGTCCAAAGCCACAGAAATTGCCGTTTCACTCGTTTCCATCCATCCACTCATCTATTCATCTGTTTCGGTTTACAAAGTGGATACTGCGAATTCTAAGAGTTCATTCTTCCATAAACACCGGCTTCAGCATGGATCCAAATGGAAAAATGGACCAGACGGTGCAACTGGTGAAATCGGTCTCTGATAAGCATCTTGATCTTTTGAGGCCATCTGCCCGAATTTGTTCAATATTCAAAGGCCAAGGAAAAGATGCTCCAGACCACATAAGGAGCAAATACACACTTCTCAGAGATGTAGAGGATGCTCAAGTAGGGCTATATGACAAGCCTCTCCCGTGTTTTGGCTGCGGAATAGGATGGTTTTCTTTCCTCCTGGGGTTTTTTTTCCCATTGCTGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCTCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCGTCTGCCATTGCTGCACTTGCATGTTCAATCCTCTTGTTAATCGTGGTAGCTGTTCTTCTATGA

Protein sequence

MASSTNRESYGKRVLSLIHTPIPSLIRPKPQKLPFHSFPSIHSSIHLFRFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL*

Homology

[Close]

BLAST of CsGy2G000290 vs. NCBI nr
Match: XP_011648592.1 (uncharacterized protein LOC101207093 isoform X1 [Cucumis sativus])

HSP 1 Score: 312 bits (800), Expect = 3.82e-106
Identity = 161/173 (93.06%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 32  KLPFH--SFPSIHSSIHLFRFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDK 91
           +LP H  +F  + SSI   RFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDK
Sbjct: 9   RLPIHLTAFGRLKSSI---RFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDK 68

Query: 92  HLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSF 151
           HLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSF
Sbjct: 69  HLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSF 128

Query: 152 LLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL 202
           LLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL
Sbjct: 129 LLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL 178

[Close]

BLAST of CsGy2G000290 vs. NCBI nr
Match: XP_004141063.1 (uncharacterized protein LOC101207093 isoform X2 [Cucumis sativus] >KGN60545.2 hypothetical protein Csa_019181 [Cucumis sativus])

HSP 1 Score: 266 bits (680), Expect = 1.56e-88
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 70  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 129
           MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ
Sbjct: 1   MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 60

Query: 130 VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALA 189
           VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALA
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALA 120

Query: 190 CSILLLIVVAVLL 202
           CSILLLIVVAVLL
Sbjct: 121 CSILLLIVVAVLL 133

[Close]

BLAST of CsGy2G000290 vs. NCBI nr
Match: XP_008459564.1 (PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo] >XP_008459572.1 PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo] >KAA0061479.1 60S ribosomal protein L18a-1 [Cucumis melo var. makuwa] >TYK10795.1 60S ribosomal protein L18a-1 [Cucumis melo var. makuwa])

HSP 1 Score: 263 bits (673), Expect = 1.82e-87
Identity = 130/133 (97.74%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 70  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 129
           MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDSQ 60

Query: 130 VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALA 189
           VGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWNARRDPRERAGLAASAIAALA
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAALA 120

Query: 190 CSILLLIVVAVLL 202
           CSI+LLIVVAVLL
Sbjct: 121 CSIILLIVVAVLL 133

[Close]

BLAST of CsGy2G000290 vs. NCBI nr
Match: XP_038889607.1 (uncharacterized protein LOC120079478 [Benincasa hispida])

HSP 1 Score: 258 bits (660), Expect = 1.74e-85
Identity = 127/133 (95.49%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 70  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 129
           MDPNGK+DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDA DHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRSKYTLLRDVEDSQ 60

Query: 130 VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALA 189
           VGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWNARRDPRERAGLAASAIAALA
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAALA 120

Query: 190 CSILLLIVVAVLL 202
           CSI+LL+VVAVLL
Sbjct: 121 CSIILLVVVAVLL 133

[Close]

BLAST of CsGy2G000290 vs. NCBI nr
Match: XP_022946692.1 (uncharacterized protein LOC111450686 [Cucurbita moschata] >XP_022946693.1 uncharacterized protein LOC111450686 [Cucurbita moschata])

HSP 1 Score: 245 bits (625), Expect = 3.85e-80
Identity = 117/131 (89.31%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 70  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 129
           MDPN K+D TVQLVKSVSD+HLDLLRPSARICSIFKGQGKDA DHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNAKIDPTVQLVKSVSDRHLDLLRPSARICSIFKGQGKDASDHIRSKYTLLRDVEDSQ 60

Query: 130 VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALA 189
           VGLYDKPLPCFGCGIGWFSFLLGF FP++WYYATILYFWN+RRDPRERAGLAAS+IAALA
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFLFPVMWYYATILYFWNSRRDPRERAGLAASSIAALA 120

Query: 190 CSILLLIVVAV 200
           CS++LL+VVAV
Sbjct: 121 CSVILLVVVAV 131

[Close]

BLAST of CsGy2G000290 vs. ExPASy TrEMBL
Match: A0A0A0LKM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000300 PE=4 SV=1)

HSP 1 Score: 312 bits (800), Expect = 3.23e-106
Identity = 161/173 (93.06%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 32  KLPFH--SFPSIHSSIHLFRFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDK 91
           +LP H  +F  + SSI   RFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDK
Sbjct: 25  RLPIHLTAFGRLKSSI---RFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDK 84

Query: 92  HLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSF 151
           HLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSF
Sbjct: 85  HLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSF 144

Query: 152 LLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL 202
           LLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL
Sbjct: 145 LLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL 194

[Close]

BLAST of CsGy2G000290 vs. ExPASy TrEMBL
Match: A0A1S3CAZ9 (uncharacterized protein LOC103498658 OS=Cucumis melo OX=3656 GN=LOC103498658 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 8.82e-88
Identity = 130/133 (97.74%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 70  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 129
           MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDSQ 60

Query: 130 VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALA 189
           VGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWNARRDPRERAGLAASAIAALA
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAALA 120

Query: 190 CSILLLIVVAVLL 202
           CSI+LLIVVAVLL
Sbjct: 121 CSIILLIVVAVLL 133

[Close]

BLAST of CsGy2G000290 vs. ExPASy TrEMBL
Match: A0A5D3CGZ6 (60S ribosomal protein L18a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001100 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 8.82e-88
Identity = 130/133 (97.74%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 70  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 129
           MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDSQ 60

Query: 130 VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALA 189
           VGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWNARRDPRERAGLAASAIAALA
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIAALA 120

Query: 190 CSILLLIVVAVLL 202
           CSI+LLIVVAVLL
Sbjct: 121 CSIILLIVVAVLL 133

[Close]

BLAST of CsGy2G000290 vs. ExPASy TrEMBL
Match: A0A6J1G4J6 (uncharacterized protein LOC111450686 OS=Cucurbita moschata OX=3662 GN=LOC111450686 PE=4 SV=1)

HSP 1 Score: 245 bits (625), Expect = 1.86e-80
Identity = 117/131 (89.31%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 70  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 129
           MDPN K+D TVQLVKSVSD+HLDLLRPSARICSIFKGQGKDA DHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNAKIDPTVQLVKSVSDRHLDLLRPSARICSIFKGQGKDASDHIRSKYTLLRDVEDSQ 60

Query: 130 VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALA 189
           VGLYDKPLPCFGCGIGWFSFLLGF FP++WYYATILYFWN+RRDPRERAGLAAS+IAALA
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFLFPVMWYYATILYFWNSRRDPRERAGLAASSIAALA 120

Query: 190 CSILLLIVVAV 200
           CS++LL+VVAV
Sbjct: 121 CSVILLVVVAV 131

[Close]

BLAST of CsGy2G000290 vs. ExPASy TrEMBL
Match: A0A6J1KAT7 (uncharacterized protein LOC111493795 OS=Cucurbita maxima OX=3661 GN=LOC111493795 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 5.33e-80
Identity = 116/131 (88.55%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 70  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ 129
           MDPN K+D TVQLVKSVSD+HLDLLRP+ARICSIFKGQGKDA DHIRSKYTLLRDVED+Q
Sbjct: 1   MDPNAKIDPTVQLVKSVSDRHLDLLRPTARICSIFKGQGKDASDHIRSKYTLLRDVEDSQ 60

Query: 130 VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALA 189
           VGLYDKPLPCFGCGIGWFSFLLGF FP++WYYATILYFWN+RRDPRERAGLAAS+IAALA
Sbjct: 61  VGLYDKPLPCFGCGIGWFSFLLGFLFPVMWYYATILYFWNSRRDPRERAGLAASSIAALA 120

Query: 190 CSILLLIVVAV 200
           CS++LL+VVAV
Sbjct: 121 CSVILLVVVAV 131

[Close]

BLAST of CsGy2G000290 vs. TAIR 10
Match: AT4G26060.1 (Ribosomal protein L18ae family )

HSP 1 Score: 149.1 bits (375), Expect = 4.0e-36
Identity = 76/123 (61.79%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 77  DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKP 136
           D + +LVKSV+DKH  L+RP A+  S      KDA    + +YTL++DV++ + G+YDKP
Sbjct: 10  DGSAELVKSVADKHAGLVRPVAKYYSAV----KDAMVCGKGRYTLVKDVDEVENGVYDKP 69

Query: 137 LPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLL 196
           LPCFGCGIGWFSFLLGF FP LWYYAT+LYF N  R+DPRERAGLAASAI A+  S+LLL
Sbjct: 70  LPCFGCGIGWFSFLLGFVFPFLWYYATLLYFGNYYRKDPRERAGLAASAITAMGFSLLLL 128

Query: 197 IVV 199
           ++V
Sbjct: 130 VIV 128

[Close]

BLAST of CsGy2G000290 vs. TAIR 10
Match: AT5G57060.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to Gram-negative bacterium, cytolysis; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Channel forming colicin, C-terminal cytotoxic (InterPro:IPR000293); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 141.4 bits (355), Expect = 8.3e-34
Identity = 73/134 (54.48%), Postives = 94/134 (70.15%), Query Frame = 0


Query: 70  MDPNGKM---DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVE 129
           MD N K    +   +LVK ++D+H  L++ ++R  S      KDA    + +YTL++DV+
Sbjct: 1   MDENSKFVSGNGRTELVKFIADRHAKLMKQASRHYSAI----KDAMARGKKRYTLVKDVD 60

Query: 130 DAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAI 189
           D + G YDKPLPCFGCGIGWFSFLLGF FP LWYYA  LYF N  R+DPRERAGLAASAI
Sbjct: 61  DMETGAYDKPLPCFGCGIGWFSFLLGFMFPFLWYYAAFLYFGNYYRKDPRERAGLAASAI 120

Query: 190 AALACSILLLIVVA 200
            A+  S++LL++ A
Sbjct: 121 TAMGFSLVLLVIFA 130

[Close]

BLAST of CsGy2G000290 vs. TAIR 10
Match: AT5G57060.2 (BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 61/92 (66.30%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 109 KDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFW 168
           KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF FP LWYYA  LYF 
Sbjct: 12  KDAMARGKKRYTLVKDVDDMETGAYDKPLPCFGCGIGWFSFLLGFMFPFLWYYAAFLYFG 71

Query: 169 N-ARRDPRERAGLAASAIAALACSILLLIVVA 200
           N  R+DPRERAGLAASAI A+  S++LL++ A
Sbjct: 72  NYYRKDPRERAGLAASAITAMGFSLVLLVIFA 103

[Close]

BLAST of CsGy2G000290 vs. TAIR 10
Match: AT1G54217.2 (Ribosomal protein L18ae family )

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 110 DAPDHIRSKYTLLR-DVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFW 169
           D  +  + KY L+R D ED+++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  
Sbjct: 5   DLEEQKKGKYVLIRDDAEDSELGQFYKPLPCFGFGIGWFSFLLGFVFPFAWYVATFLYLI 64

Query: 170 N-ARRDPRERAGLAASAIAALACSILLLIVVAVLL 203
           +   RDPRER+GLAASAIAAL  S+ L+I V VL+
Sbjct: 65  SYYHRDPRERSGLAASAIAALIFSVALVITVLVLV 99

[Close]

BLAST of CsGy2G000290 vs. TAIR 10
Match: AT1G54217.1 (Ribosomal protein L18ae family )

HSP 1 Score: 102.8 bits (255), Expect = 3.3e-22
Identity = 56/89 (62.92%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 116 RSKYTLLR-DVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRD 175
           + KY L+R D ED+++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  +   RD
Sbjct: 10  KGKYVLIRDDAEDSELGQFYKPLPCFGFGIGWFSFLLGFVFPFAWYVATFLYLISYYHRD 69

Query: 176 PRERAGLAASAIAALACSILLLIVVAVLL 203
           PRER+GLAASAIAAL  S+ L+I V VL+
Sbjct: 70  PRERSGLAASAIAALIFSVALVITVLVLV 98

The following BLAST results are available for this feature:

BLAST of CsGy2G000290 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G000290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648592.1	3.82e-106	93.06	uncharacterized protein LOC101207093 isoform X1 [Cucumis sativus]	[more]
XP_004141063.1	1.56e-88	100.00	uncharacterized protein LOC101207093 isoform X2 [Cucumis sativus] >KGN60545.2 hy...	[more]
XP_008459564.1	1.82e-87	97.74	PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo] >XP_008459572.1 P...	[more]
XP_038889607.1	1.74e-85	95.49	uncharacterized protein LOC120079478 [Benincasa hispida]	[more]
XP_022946692.1	3.85e-80	89.31	uncharacterized protein LOC111450686 [Cucurbita moschata] >XP_022946693.1 unchar...	[more]

BLAST of CsGy2G000290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKM2	3.23e-106	93.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000300 PE=4 SV=1	[more]
A0A1S3CAZ9	8.82e-88	97.74	uncharacterized protein LOC103498658 OS=Cucumis melo OX=3656 GN=LOC103498658 PE=...	[more]
A0A5D3CGZ6	8.82e-88	97.74	60S ribosomal protein L18a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1G4J6	1.86e-80	89.31	uncharacterized protein LOC111450686 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]
A0A6J1KAT7	5.33e-80	88.55	uncharacterized protein LOC111493795 OS=Cucurbita maxima OX=3661 GN=LOC111493795...	[more]

BLAST of CsGy2G000290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26060.1	4.0e-36	61.79	Ribosomal protein L18ae family	[more]
AT5G57060.1	8.3e-34	54.48	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to Gram-...	[more]
AT5G57060.2	1.2e-29	66.30	BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR...	[more]
AT1G54217.2	1.1e-22	60.00	Ribosomal protein L18ae family	[more]
AT1G54217.1	3.3e-22	62.92	Ribosomal protein L18ae family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46666	60S RIBOSOMAL L18A-LIKE PROTEIN	coord: 74..199
None	No IPR available	PANTHER	PTHR46666:SF6	BNAC08G12080D PROTEIN	coord: 74..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G000290.2	CsGy2G000290.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane