CsGy2G000150 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G000150
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RING-box protein 1a
Location	Gy14Chr2: 113952 .. 116659 (-)
RNA-Seq Expression	CsGy2G000150
Synteny	CsGy2G000150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAAATAACACATTTTTTGGAAAATAAAAAATATTAGGAATTGAGTCCGCCCGCGCCGTGTGCAGCCGACGGAGGAGGAAGAAGCTTCTTTTATTGCCAGTTATTTATGGCCACCTTGGACTCCGACGTTCCAATGGTTCCAGCCGTCGAGGCTTCGAGCAGTGCCGGTCCTTCATCTTCCAAGAAACCCAAGCGTTTTGAGATCAAAAAATGGAACGCCGTCGCTCTTTGGGCATGGGGTATTTTCAAAACCCTAATCTTTGCTATTACTGCTCTCATTGTCCTGTTTACTTCGAGCATTGAAACCTTCTTCTCTAAATCGCACAATTCATTCTTATTGCAGATATCGTTGTCGATAACTGTGCGATCTGTAGGAACCATATCATGGATCTTTGTAAGTTCATCATCACCCAGACTTAAGTTTTAAGATATCTGGAGCGATCTTCTTCTTCCCTTCTGTCGACCTTCCTGCCCATTAAAAAAAATCTATATTTATTTTAACTACCTATCATTGTTTGGTATCTAGGTATTGAGTGTCAAGCTAACCAGGCCAGCGCAACCAGCGAGGAATGTACCGTAGCTTGGGGTACGTTTTCTTATTCCCTCTTCCTCACCAACCCATTCACAGAGAGACGATATGTGCTACTATTTTCAATACTTTGGTTTGCATCTTACATGTGGAGGCGGATGATTGATTGAGCCTCTCTTCTGAATATTTAGAGCAACAATATTTCTAATAGGAGGATAACATAGCATGATCTCTCCATATTAGTGCATGGCCTGGATTATAGGGAGATCGCGTGGATGTTAGGTTTAATTCCTCCTTGTGACTTCAGCCACACGACTTTTTTATAACTATTAATTATGAACTAGGTTTTATTCAGTTGGATTGTAGTCTTTTTCTGTGGTTTTTTTTTTTTTTTTGGTCAATTGCTGTAACCTTAAATTGTTTCCTACCTTAGCCATATTGATCCAGTCTGTAGTAAGCTAACCTGGAAAGCTAAAATTTTGAAAAGTAAGTGTTTTTTATGTTCTTTTTGGTTTACCCGCTCTAGTTTGGTAGTTTTTTTTTAAGAGCCGAGGAAAACAAGCACAAGAACACAACCTAGAGTACTCACTACATACAGAATTGACAATTCGAAATGTCTAGTCACGAATCCAACCTTGAAATGAGAAATTGTCTTCATCTTTAGAACTTCCAAAGAAATTCAATTAGAAACCTGAAGGAAGCAATACTTGACCAGCCCATCAAAAGACCTTTAGGAAGGGAAACAACGCCAACAACTAAACTGCCCATTACCTACCTTTCTAAGCCTCTCAAGAGTTTTTATGGTCTCTTAAGTGTCTCTTTCAAGAGACTCAACGTTAACCATCAACCTTTCTAACCATAATAAGAGGTACTGATGCAGAGGTTGCAAACAACTACGCTAAAACCCTACTTGTCAAATTTTGTCTCATCAGTTGTGTTCCCTGGTCTCCTTGTTGAAGATAAATCAATTCAACGTCTTTTGGTAGCCAATGCCATATAATATTAAAGCTAGATAATCAGAACGGATATATTTCAGTGTTGAAACGTTAGATTGACTTTACAGGTCTCTTAGATCTTCCAAACCAAATTTTTTTTCTTATTGGAGTGCCTTCCCAAGTTGTTCCTTTTTTTTTTTTTTGGGTAGTTGCAAGTAGTTGCTGATCTTACAGTGGCTGGCCTAAATGTTCTGCTTCTGTTTCAGAAATTAAAGGGACCAAATTGTTCATTTGGGTATTGATCTTACTAATTCAATTTTTTTGGCTAATTCTAATTTATGACTATATTGTCAAACATCTTGATGTTCTTCTCTGAAAAGAAACAAACATCTTGATGTTGCAAATATTCTCTCCTTAATCAAGGTCACGGAGGAGATAGAAATTTGCTAAAAAATCATTTATATTAATTGCTTAATGTTAGCTTCATATTATTTTTGAGTCTGGTGACTTAAAACTTTATCCAACCTTCAGCATGAAACATTCTTTTGCAATTATCACCCAACATTTATGTGCCTCTTTTGCTCCCAATGTGGAATTATAGCAGAAGCCTAAGGCGTGGTGTTGAATGTCTTGTTTTTTGTATTTGTAGGGGTGTGTAATCATGCATTTCATTTCCACTGTATCAGTAGATGGTTGAAGACACGTCAAGTTTGCCCATTGGGTATGCGTTTCAAGTTCTTCCCCTACCCTTTTCTCATATCTTTATATGAACTTCAAAATTTAAAGGGAGCTTTGCCATTTTTACAGATAATAGCGAATGGGAATTTCAGAAGTATGGTCACTAGAACTTTCGTGCTGTTGAGGATATGATTTTTATTCCTTAAAATTCTCTTGGGGCTATAAGGGTTTTGACGATGGACTCTCCCAATAAGATTTCTGAACTAGCAGTCTCAAGATGCATTTTGTTGAACTACAGTTATGCAGAGGATTAAATGACGCCAACTTGAATACATTATCTGATTATACTCCGGAGTTGTTTATAGAAAACGGGGTAGCACTTGAACGTTAGTTTGTTGTTGTGTGTGTGCATGTTTGTTTGTTTGCTTTTTTAATTTAAACAATCGGGTTAATCCTTTGTTTTACTGCTGCTTACAATATCTGTACTTGTATTTACTTTAAGGTTTCAATTAATCTGGAAAATTTGGATTTATTTTAGTTGCCCTTCGGGTCTGTAAATTTCTTC

mRNA sequence

GGCAAATAACACATTTTTTGGAAAATAAAAAATATTAGGAATTGAGTCCGCCCGCGCCGTGTGCAGCCGACGGAGGAGGAAGAAGCTTCTTTTATTGCCAGTTATTTATGGCCACCTTGGACTCCGACGTTCCAATGGTTCCAGCCGTCGAGGCTTCGAGCAGTGCCGGTCCTTCATCTTCCAAGAAACCCAAGCGTTTTGAGATCAAAAAATGGAACGCCGTCGCTCTTTGGGCATGGGATATCGTTGTCGATAACTGTGCGATCTGTAGGAACCATATCATGGATCTTTGTATTGAGTGTCAAGCTAACCAGGCCAGCGCAACCAGCGAGGAATGTACCGTAGCTTGGGGGGTGTGTAATCATGCATTTCATTTCCACTGTATCAGTAGATGGTTGAAGACACGTCAAGTTTGCCCATTGGGTATGCGTTTCAAGTTCTTCCCCTACCCTTTTCTCATATCTTTATATGAACTTCAAAATTTAAAGGGAGCTTTGCCATTTTTACAGATAATAGCGAATGGGAATTTCAGAAGTATGGTCACTAGAACTTTCGTGCTGTTGAGGATATGATTTTTATTCCTTAAAATTCTCTTGGGGCTATAAGGGTTTTGACGATGGACTCTCCCAATAAGATTTCTGAACTAGCAGTCTCAAGATGCATTTTGTTGAACTACAGTTATGCAGAGGATTAAATGACGCCAACTTGAATACATTATCTGATTATACTCCGGAGTTGTTTATAGAAAACGGGGTAGCACTTGAACGTTAGTTTGTTGTTGTGTGTGTGCATGTTTGTTTGTTTGCTTTTTTAATTTAAACAATCGGGTTAATCCTTTGTTTTACTGCTGCTTACAATATCTGTACTTGTATTTACTTTAAGGTTTCAATTAATCTGGAAAATTTGGATTTATTTTAGTTGCCCTTCGGGTCTGTAAATTTCTTC

Coding sequence (CDS)

ATGGCCACCTTGGACTCCGACGTTCCAATGGTTCCAGCCGTCGAGGCTTCGAGCAGTGCCGGTCCTTCATCTTCCAAGAAACCCAAGCGTTTTGAGATCAAAAAATGGAACGCCGTCGCTCTTTGGGCATGGGATATCGTTGTCGATAACTGTGCGATCTGTAGGAACCATATCATGGATCTTTGTATTGAGTGTCAAGCTAACCAGGCCAGCGCAACCAGCGAGGAATGTACCGTAGCTTGGGGGGTGTGTAATCATGCATTTCATTTCCACTGTATCAGTAGATGGTTGAAGACACGTCAAGTTTGCCCATTGGGTATGCGTTTCAAGTTCTTCCCCTACCCTTTTCTCATATCTTTATATGAACTTCAAAATTTAAAGGGAGCTTTGCCATTTTTACAGATAATAGCGAATGGGAATTTCAGAAGTATGGTCACTAGAACTTTCGTGCTGTTGAGGATATGA

Protein sequence

MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLGMRFKFFPYPFLISLYELQNLKGALPFLQIIANGNFRSMVTRTFVLLRI*

Homology

[Close]

BLAST of CsGy2G000150 vs. ExPASy Swiss-Prot
Match: Q940X7 (RING-box protein 1a OS=Arabidopsis thaliana OX=3702 GN=RBX1A PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.5e-51
Identity = 97/106 (91.51%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIM 60
           MATLDSDV M+PA EASSS A  SS+KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIM
Sbjct: 1   MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIM 60

Query: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 106
           DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 106

[Close]

BLAST of CsGy2G000150 vs. ExPASy Swiss-Prot
Match: Q9M2B0 (RING-box protein 1b OS=Arabidopsis thaliana OX=3702 GN=RBX1B PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.5e-45
Identity = 87/105 (82.86%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MA+L+SDV M     +S S   SSSK  KRFE+KKW+AVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MASLNSDVIM--GESSSISVPSSSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 106
           LCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  LCIECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 103

[Close]

BLAST of CsGy2G000150 vs. ExPASy Swiss-Prot
Match: P62877 (E3 ubiquitin-protein ligase RBX1 OS=Homo sapiens OX=9606 GN=RBX1 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.5e-45
Identity = 81/99 (81.82%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 10  MVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 69
           M  A++  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
Sbjct: 1   MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 60

Query: 70  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLGMR 109
           ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL  R
Sbjct: 61  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 99

[Close]

BLAST of CsGy2G000150 vs. ExPASy Swiss-Prot
Match: P62878 (E3 ubiquitin-protein ligase RBX1 OS=Mus musculus OX=10090 GN=Rbx1 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.5e-45
Identity = 81/99 (81.82%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 10  MVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 69
           M  A++  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
Sbjct: 1   MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 60

Query: 70  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLGMR 109
           ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL  R
Sbjct: 61  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 99

[Close]

BLAST of CsGy2G000150 vs. ExPASy Swiss-Prot
Match: Q8QG64 (RING-box protein 1 OS=Salmo salar OX=8030 GN=rbx1 PE=2 SV=2)

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-44
Identity = 80/99 (80.81%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 10  MVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 69
           M  A++  + +  +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
Sbjct: 1   MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 60

Query: 70  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLGMR 109
           ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL  R
Sbjct: 61  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 99

[Close]

BLAST of CsGy2G000150 vs. NCBI nr
Match: XP_004141073.1 (RING-box protein 1a [Cucumis sativus] >KGN60503.1 hypothetical protein Csa_019429 [Cucumis sativus])

HSP 1 Score: 225 bits (573), Expect = 2.83e-73
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105

[Close]

BLAST of CsGy2G000150 vs. NCBI nr
Match: XP_022933228.1 (RING-box protein 1a [Cucurbita moschata] >XP_022960807.1 RING-box protein 1a [Cucurbita moschata] >XP_022968584.1 RING-box protein 1a [Cucurbita maxima] >XP_022988432.1 RING-box protein 1a [Cucurbita maxima] >XP_023515504.1 RING-box protein 1a [Cucurbita pepo subsp. pepo] >XP_023530609.1 RING-box protein 1a [Cucurbita pepo subsp. pepo] >KAG6588086.1 RING-box protein 1a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021972.1 RING-box protein 1a, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG6590039.1 RING-box protein 1a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023702.1 RING-box protein 1a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 222 bits (566), Expect = 3.30e-72
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPA EASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105

[Close]

BLAST of CsGy2G000150 vs. NCBI nr
Match: XP_004144035.1 (RING-box protein 1a [Cucumis sativus] >XP_008450927.1 PREDICTED: RING-box protein 1a [Cucumis melo] >XP_038879722.1 RING-box protein 1a [Benincasa hispida] >KAA0055771.1 RING-box protein 1a [Cucumis melo var. makuwa] >KGN66305.1 hypothetical protein Csa_007202 [Cucumis sativus] >TYK10022.1 RING-box protein 1a [Cucumis melo var. makuwa])

HSP 1 Score: 221 bits (563), Expect = 9.45e-72
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLD+DVPMVPA EASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105

[Close]

BLAST of CsGy2G000150 vs. NCBI nr
Match: XP_008459863.1 (PREDICTED: RING-box protein 1a-like isoform X1 [Cucumis melo])

HSP 1 Score: 221 bits (562), Expect = 1.34e-71
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMV AVEASSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVSAVEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105

[Close]

BLAST of CsGy2G000150 vs. NCBI nr
Match: XP_038889977.1 (RING-box protein 1a-like isoform X1 [Benincasa hispida])

HSP 1 Score: 220 bits (560), Expect = 2.71e-71
Identity = 102/105 (97.14%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPA +ASSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPAGDASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105

[Close]

BLAST of CsGy2G000150 vs. ExPASy TrEMBL
Match: A0A0A0LFP5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000120 PE=4 SV=1)

HSP 1 Score: 225 bits (573), Expect = 1.37e-73
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105

[Close]

BLAST of CsGy2G000150 vs. ExPASy TrEMBL
Match: A0A6J1I027 (RING-box protein 1a OS=Cucurbita maxima OX=3661 GN=LOC111467761 PE=4 SV=1)

HSP 1 Score: 222 bits (566), Expect = 1.60e-72
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPA EASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105

[Close]

BLAST of CsGy2G000150 vs. ExPASy TrEMBL
Match: A0A6J1F460 (RING-box protein 1a OS=Cucurbita moschata OX=3662 GN=LOC111440096 PE=4 SV=1)

HSP 1 Score: 222 bits (566), Expect = 1.60e-72
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLDSDVPMVPA EASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDSDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105

[Close]

BLAST of CsGy2G000150 vs. ExPASy TrEMBL
Match: A0A5D3CFD3 (RING-box protein 1a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001540 PE=4 SV=1)

HSP 1 Score: 221 bits (563), Expect = 4.58e-72
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLD+DVPMVPA EASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105

[Close]

BLAST of CsGy2G000150 vs. ExPASy TrEMBL
Match: A0A0A0LWN9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G597030 PE=4 SV=1)

HSP 1 Score: 221 bits (563), Expect = 4.58e-72
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MATLD+DVPMVPA EASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MATLDTDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105
           LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 105

[Close]

BLAST of CsGy2G000150 vs. TAIR 10
Match: AT5G20570.1 (RING-box 1 )

HSP 1 Score: 203.8 bits (517), Expect = 1.0e-52
Identity = 97/106 (91.51%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIM 60
           MATLDSDV M+PA EASSS A  SS+KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIM
Sbjct: 1   MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIM 60

Query: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 106
           DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 106

[Close]

BLAST of CsGy2G000150 vs. TAIR 10
Match: AT5G20570.2 (RING-box 1 )

HSP 1 Score: 190.3 bits (482), Expect = 1.2e-48
Identity = 97/130 (74.62%), Postives = 100/130 (76.92%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIM 60
           MATLDSDV M+PA EASSS A  SS+KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIM
Sbjct: 1   MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIM 60

Query: 61  DLCIECQANQASATSEECTVAW------------------------GVCNHAFHFHCISR 106
           DLCIECQANQASATSEECTVAW                        GVCNHAFHFHCISR
Sbjct: 61  DLCIECQANQASATSEECTVAWEDDQNNCNKYFCILDCSMKDDHLEGVCNHAFHFHCISR 120

[Close]

BLAST of CsGy2G000150 vs. TAIR 10
Match: AT5G20570.3 (RING-box 1 )

HSP 1 Score: 189.9 bits (481), Expect = 1.5e-48
Identity = 96/124 (77.42%), Postives = 99/124 (79.84%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSS-AGPSSSKKPKRFEIKKWNAVALWAWD-------------- 60
           MATLDSDV M+PA EASSS A  SS+KK KRFEIKKW+AVALWAW               
Sbjct: 1   MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWGNLENPYTLSSIGLS 60

Query: 61  ----IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ 106
               IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ
Sbjct: 61  MFRYIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ 120

[Close]

BLAST of CsGy2G000150 vs. TAIR 10
Match: AT3G42830.1 (RING/U-box superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 2.5e-46
Identity = 87/105 (82.86%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 1   MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 60
           MA+L+SDV M     +S S   SSSK  KRFE+KKW+AVALWAWDIVVDNCAICRNHIMD
Sbjct: 1   MASLNSDVIM--GESSSISVPSSSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIMD 60

Query: 61  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 106
           LCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL
Sbjct: 61  LCIECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL 103

[Close]

BLAST of CsGy2G000150 vs. TAIR 10
Match: AT3G05870.1 (anaphase-promoting complex/cyclosome 11 )

HSP 1 Score: 72.8 bits (177), Expect = 2.8e-13
Identity = 34/85 (40.00%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 27  KPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNH 86
           K K   I  W+AVA W WD   + C ICR      C +C+        ++C + WG CNH
Sbjct: 2   KVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNH 61

Query: 87  AFHFHCISRWL--KTRQV-CPLGMR 109
           AFH HCI +W+  +T Q  CP+  R
Sbjct: 62  AFHLHCILKWVNSQTSQAHCPMCRR 81

The following BLAST results are available for this feature:

BLAST of CsGy2G000150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940X7	1.5e-51	91.51	RING-box protein 1a OS=Arabidopsis thaliana OX=3702 GN=RBX1A PE=1 SV=1	[more]
Q9M2B0	3.5e-45	82.86	RING-box protein 1b OS=Arabidopsis thaliana OX=3702 GN=RBX1B PE=2 SV=1	[more]
P62877	3.5e-45	81.82	E3 ubiquitin-protein ligase RBX1 OS=Homo sapiens OX=9606 GN=RBX1 PE=1 SV=1	[more]
P62878	3.5e-45	81.82	E3 ubiquitin-protein ligase RBX1 OS=Mus musculus OX=10090 GN=Rbx1 PE=1 SV=1	[more]
Q8QG64	1.0e-44	80.81	RING-box protein 1 OS=Salmo salar OX=8030 GN=rbx1 PE=2 SV=2	[more]

BLAST of CsGy2G000150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141073.1	2.83e-73	100.00	RING-box protein 1a [Cucumis sativus] >KGN60503.1 hypothetical protein Csa_01942...	[more]
XP_022933228.1	3.30e-72	99.05	RING-box protein 1a [Cucurbita moschata] >XP_022960807.1 RING-box protein 1a [Cu...	[more]
XP_004144035.1	9.45e-72	98.10	RING-box protein 1a [Cucumis sativus] >XP_008450927.1 PREDICTED: RING-box protei...	[more]
XP_008459863.1	1.34e-71	98.10	PREDICTED: RING-box protein 1a-like isoform X1 [Cucumis melo]	[more]
XP_038889977.1	2.71e-71	97.14	RING-box protein 1a-like isoform X1 [Benincasa hispida]	[more]

BLAST of CsGy2G000150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFP5	1.37e-73	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000120 P...	[more]
A0A6J1I027	1.60e-72	99.05	RING-box protein 1a OS=Cucurbita maxima OX=3661 GN=LOC111467761 PE=4 SV=1	[more]
A0A6J1F460	1.60e-72	99.05	RING-box protein 1a OS=Cucurbita moschata OX=3662 GN=LOC111440096 PE=4 SV=1	[more]
A0A5D3CFD3	4.58e-72	98.10	RING-box protein 1a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G0...	[more]
A0A0A0LWN9	4.58e-72	98.10	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G597030 P...	[more]

BLAST of CsGy2G000150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20570.1	1.0e-52	91.51	RING-box 1	[more]
AT5G20570.2	1.2e-48	74.62	RING-box 1	[more]
AT5G20570.3	1.5e-48	77.42	RING-box 1	[more]
AT3G42830.1	2.5e-46	82.86	RING/U-box superfamily protein	[more]
AT3G05870.1	2.8e-13	40.00	anaphase-promoting complex/cyclosome 11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024766	Zinc finger, RING-H2-type	PFAM	PF12678	zf-rbx1	coord: 49..105 e-value: 2.2E-24 score: 85.5
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 18..111 e-value: 1.1E-31 score: 110.8
None	No IPR available	PANTHER	PTHR11210	RING BOX	coord: 1..106
None	No IPR available	PANTHER	PTHR11210:SF41	E3 UBIQUITIN-PROTEIN LIGASE RBX1	coord: 1..106
None	No IPR available	CDD	cd16485	mRING-H2-C3H2C2D_RBX1	coord: 49..105 e-value: 2.28668E-44 score: 138.271
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 29..107
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 62..105 score: 8.623992

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G000150.2	CsGy2G000150.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0031461	cullin-RING ubiquitin ligase complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097602	cullin family protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding