CsGy1G030728 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAAGACGAAGTGAAAAATGTCTTGGGTCTAGGATGAAAAAATCAAGAACAAACGAAGATAATCCAATCCTTCTCAATGATTATGAGGTATACTTAAGATTAGTTGTTATAATTTGTTACTTTGCGGATGTTTGATATGTAAATATATTTTAATTATATTGTATTCATCTATATCATAGGATGAAAAGATATCAAGTTCTCAAGAGACTTATGAAGAAAATCAAATGAATTACAAACCTACACAAACAGTGTACCCAGGTGATGATGAATATGATATAACAGGACCAAATAACACTCAAATTGTTCTGTACAATGAAAACTTAGCAAGTAAAAGAAAAATAAAGGTAGAAACGTCATTTCAGAAATTGGATGCACAAGGAACAGAGGTTAGTTAA ATGGTAAGACGAAGTGAAAAATGTCTTGGGTCTAGGATGAAAAAATCAAGAACAAACGAAGATAATCCAATCCTTCTCAATGATTATGAGGATGAAAAGATATCAAGTTCTCAAGAGACTTATGAAGAAAATCAAATGAATTACAAACCTACACAAACAGTGTACCCAGGTGATGATGAATATGATATAACAGGACCAAATAACACTCAAATTGTTCTGTACAATGAAAACTTAGCAAGTAAAAGAAAAATAAAGGTAGAAACGTCATTTCAGAAATTGGATGCACAAGGAACAGAGGTTAGTTAA ATGGTAAGACGAAGTGAAAAATGTCTTGGGTCTAGGATGAAAAAATCAAGAACAAACGAAGATAATCCAATCCTTCTCAATGATTATGAGGATGAAAAGATATCAAGTTCTCAAGAGACTTATGAAGAAAATCAAATGAATTACAAACCTACACAAACAGTGTACCCAGGTGATGATGAATATGATATAACAGGACCAAATAACACTCAAATTGTTCTGTACAATGAAAACTTAGCAAGTAAAAGAAAAATAAAGGTAGAAACGTCATTTCAGAAATTGGATGCACAAGGAACAGAGGTTAGTTAA MVRRSEKCLGSRMKKSRTNEDNPILLNDYEDEKISSSQETYEENQMNYKPTQTVYPGDDEYDITGPNNTQIVLYNENLASKRKIKVETSFQKLDAQGTEVS* Homology
BLAST of CsGy1G030728 vs. NCBI nr
Match: TYK30586.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 71.2 bits (173), Expect = 5.47e-12 Identity = 39/96 (40.62%), Postives = 64/96 (66.67%), Query Frame = 0
BLAST of CsGy1G030728 vs. NCBI nr
Match: KAA0043162.1 (uncharacterized protein E6C27_scaffold110G00260 [Cucumis melo var. makuwa] >TYK12303.1 uncharacterized protein E5676_scaffold302G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 3.43e-11 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 0
BLAST of CsGy1G030728 vs. NCBI nr
Match: KAA0066916.1 (Cell division protein ftsH [Cucumis melo var. makuwa] >TYK30198.1 Cell division protein ftsH [Cucumis melo var. makuwa]) HSP 1 Score: 63.2 bits (152), Expect = 5.83e-10 Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0
BLAST of CsGy1G030728 vs. NCBI nr
Match: KAA0035692.1 (Cell division protein ftsH [Cucumis melo var. makuwa]) HSP 1 Score: 50.8 bits (120), Expect = 5.84e-05 Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 0
BLAST of CsGy1G030728 vs. NCBI nr
Match: TYK30853.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 49.3 bits (116), Expect = 3.36e-04 Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of CsGy1G030728 vs. ExPASy TrEMBL
Match: A0A0A0K6Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G146490 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.20e-21 Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of CsGy1G030728 vs. ExPASy TrEMBL
Match: A0A5D3E3X1 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold974G00070 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.65e-12 Identity = 39/96 (40.62%), Postives = 64/96 (66.67%), Query Frame = 0
BLAST of CsGy1G030728 vs. ExPASy TrEMBL
Match: A0A5A7TIM3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00690 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.66e-11 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 0
BLAST of CsGy1G030728 vs. ExPASy TrEMBL
Match: A0A5A7VKG5 (Cell division protein ftsH OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00090 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.82e-10 Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0
BLAST of CsGy1G030728 vs. ExPASy TrEMBL
Match: A0A0A0K560 (Cell division protein ftsH OS=Cucumis sativus OX=3659 GN=Csa_7G154990 PE=4 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.18e-05 Identity = 25/57 (43.86%), Postives = 36/57 (63.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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