CsGy1G030470 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G030470
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	serine/arginine-rich SC35-like splicing factor SCL30A
Location	Gy14Chr1: 28775851 .. 28781574 (+)
RNA-Seq Expression	CsGy1G030470
Synteny	CsGy1G030470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTTTGTTGTATTTATTTATGTGAAGCGGAAATCGGATGCCCTGAAACTTACAAATCCGAAGCAACGCCGTCTGTTTCTCCATCGAATATTTCAATTTCATCTTCTGAGCCCTAATTTCTGCTTTCTCTGCCGCCGATTCACTCTCTCTTCAGAGGTCTCTTTCTCCTTCTTCCAAGCATTCACATTCACATTCACACAATTTCTTCACTTCTTTTACCGATCTATTCCCGCTTCACCATTTTGAGCTATATTTTTCCCATTTCTTAACCTGTACTTTCGTATGTCATATGGGTTTGATGTTATGCTTCGCTTTATGTGTTCGATTTCAGTTTAAAAGAAACGATCTCCAATCAATTCTGCTGCCTTGAGAACTTCTCATTACATGTTGCAATGCTTTTCAATGGTTAACTTTTCTTTTTTGTTTGCACAGCTCCAGTGAGATTCTTAGACAGCGGGCCTTTGTCTTTAGTTGCTGTACTAATGAGGGGCAGGAGTTATACTCCATCGCCGCCAAGGGGTTATGGAAGAAGGGGTCGGAGCCCCAGCCCTAGGGGGCGCTATGTGGGACGTGGAAGAGACCTTCCCACCAGCCTTCTAGTTCGTAATCTTAGCCATGACTGCAGGTTTGTTCTTAATCAGTTTGTTCTATAGTTATGCTTATGTTTCTTTTTGCTCTTAAAGATTTTTCCGTTTGGTGTGACCAATTTTCTTGCCATAGAAAGTCTGTAGGAGAAAAAGGGGTCTTTGTGTAACAAAGGTGCATGAATAGGGGAATAAAGAATCACATAGTCCAAGGCAGTTAGAAAGGGCTCTCCCTCAAACAATTGGGATTTTACAATCATAATGAAATGTCCTATTCCAAGAGCTATGAAAGAAACAAAATGCAATGGGTCGTAGAACTATCGATAGTCCCTTTCATCATATAGTCTTCTATTTCTTTATAACCTACAAAGTATGTTAAGGCCGCTCCCTTCACTTGGGGCAGGGCACTCTCCCCTCACTAGTTCTTTGTTGGGCTCTGTGTCGGGATTATTGCACCTGCTTTCACCGTTTTGTTGTACCCTTTGGGAAGACATTGTTGTATCTTTCAAGAATCTTGTGAAACAGCTTCTAAGTTCTTAATTTTTTAATTTAAATTACTTTTCATAATTGTGTTTGATTTTTATTTGAAATTTCTGTTCTGAACATTTGCAATCTTGGATTTTCATAAGCTCATGCTTAAGCCCTGGAGATTTGTTGCAATGATAGTCAGCATGCCCGACAGTGTAAAAATGCTGTATGACCCTAATATGTAGTCCGTATTCCATCACATTACTCTGCCTTGTATTTTGTAATATCAATTCAGTGAATTTTCATTCAATTTTCTTATCCATTGCGGTCCATCAGTGATTCAGTTTTGACCTGCATCCAGGAAATGAGAGAAGACCTTTGGTGTCTGAATATGAGAATTTAAAACGGTTGCATTCTTGCAACATCTTGTTCTGAGTTGCAAGTTTCTTTGAGTTTCTGTATAGTTTGTGATTTGTAATAGATCTATGTCACTGACTGTGTTCTGGTACTAATTCTTTTTAACTGCCTACTGTTTTCTTAAAACACATGTACTGACTACTGCACATTTCTGTTCTTCCTAGTTTACTGATGTCAATATATTGAGTGCTGTTTAATAATCGATTTAGAGTTAGAATATGATGATTCCTGGTCTTCTACTAATTTGAATTTGTTTTTTGTCACAGGCCTGAGGATCTTCGTAGACCATTTGGACAGTTTGGTGCTATTAAGGACATATACCTACCGAAGGATTATTATACTGGGTGAGCATGTCTGAGCTGTATGTAGGACTTGCGGATTCTTTGGTACTGATGTTCATTTTAATTAGCAAAATGGCAAATTTATAATTTGTGGTTATATGGATTTGATTAATTCTGTAAAATTTATACCACTTTTTAGTTTTAGTATCTGATAAATGTTTAACATAATAAATTTTCTTTGCTGTTTTCTCAAATTGGTTTAGAATTAATGGTATTAGTGAAAGCACATTTTCATTAACTTTCTTGCTTCTTTTGATCAAAATGTTTTTGGCACAATCCTTGGTAGAAGTCATTGCTGAAGTTTCTGAAGTAGACCCATAGTGTTTCATCTTTCAAATTATGCATCTGATTATAGGGGCGTTTCTTTCTGTTTCTTCTATTCTTTTTTTGTTTTTCCTTATCACGTATTAGGTCTGTTTTTTGAATGTTGAAGATTTTAACAGTGAAAGTAATGTTTTGAAGAAGACATCAAGTAATTAGAGTTCTATTGAAGATGATGTTAATGGTAGTGAAGATTGGAAGGAAGTTGGGTTTGAATACATAGAAGATGTTCTCAAGTCTTGAAGAATTTCAAGTCATCTTAAATCTGACACATGCAAGGTCAGCAGCCAAGTGCTTGCTTTATTATAACAGACCTTCCATATATTGCAAGGGATATGGTGGACAGTTTTATTAGAGAAGGTTTATGGCAGGCCAAATACCTGACCTGATTCTGTGGCTTTACTTACTTCTATTTTACAACATTTTCCCTTTTGCTTCTTTTGTGCAACAATTTTGCAGAGAACCACGCGGTTTTGGTTTTGTTCAATATGTAGATCCTGCTGATGCTGCAGATGCTAAACACCATATGGACGGCTGTGTTCTTCTCGGTCGGGAGTTGACTGTGGTATTTGCTGAAGAAAACAGGAAGAAACCATCTGATATGAGGGCCAGAGAAAGAGGAAGGTATGAAGCTTCCTTGTATCATTTATGAGATACTTTATAGACATGGATGCTTGTAATTAACTGTCAAATAATCTGGTGCATTTGCATAAGCCAATGTTTTCCGATCGGGTGTGCGTCTTTAGTTATTCTGCTTTCTTATTTTATTATTCATATGCGAGAAAGCTAAGATAGAATTAGTAGGGCGCGGGGAAGAGTACGAAGTCTCACCTCTAACTCTTATCCTTTTAGTTCTAGATTGGGAGACCGGTATGCAATGAAAGAGATCAACTTACCGAAACCGTTAAGCATATCTTTTCTTCTCTTAAATCAAGGTGCAAAGATCTATGGCCCACGTAGCGGGATATTGTAGGCGAAACTTAGAGGAGAGGATAGGCGTAATTGAGGAGACTAAGAAAAGACATTTATACCGCCCCGTGGGTTCATTCCCCCCTTCAGTCTACCCTTTTCAACGAAAAAAGATGGCATTGATTCAATGAACAAAGGCGAGGGCCCCTCTCTGATAAGGAAGGAAAGGAAAGAAGAAGAATTTGACGATCAATCTGGTCCGATGGCTGTTCTCCACTAACCACAAGGATATAGGGACTCTCTATTTCATCTTCGGTGCCATTGCTGGAGTGATGGGCACATGCTGAGAATTTTGCCTGTCTTCGCCTCCAACCCAAAGTAGGGTAGAAGGTAAGGGCTTGGCCCGCCTGAATAGAATGAATATCTCCTTCGTCCTGTGGCTGCTGAAGCAGTAGCAGTCAGTCGCTGCGTAACATCAATAAAGAGGAAAAAGCAGTTGAACTGGAAAGGGTAGGAGGAGATAATACGCTTTATGAATATGAGAAGAATATTGCGGAGAAGAGCGAGAATGTTCACTCTTTTATTATATTAAGGAGAAGGACGACTTCTTAATGGAACTGATTGTAGTAGGCGTCGGACTCTCAAGAAGTAAAGAGTTCTTGATAGTTGATAGGCTTTCTCCTTTTAAGTAGGTTTAGGAGGAAACTTCAGCATTACTAGTAAGCCTCATAATATAGAAGATGAAAGTCGCGGCATAATAATAGAATATGATCTTCTTGTTCTCCAACACTTCTCACGGTAAAAAAAACTCTTACTGCTTGGAAAAGCACTTTTAATATATATATAATATATATTCTTTTTTGGATATTTTGTAATATTTGGAAAGTGCTTTTATTAGGCTGAAAAGCACTATCCAATAGTTGGTTTACAGTTCACCAGTGTTTGTGCTAGCACATTCGCCGACAAAAAGACGGTCGCTTGATTGAAGCAAGGCACAGTTAGTAAAATAATAAATAATAATAATATAAATAAAAAAAACATAAGATTAGAAAGGAATTAACTCAAATAATCTTGAGCAAAAACATATTTGAAATATAGAAATAAAAATGATTTTGTTTCTCCTTTGAGTCTTTTTCTTCTTCAATTTTCCTTCATTTCTTTGGTTTTCTTTAATTCTACCTTCACAAACTTTGATTTTTCATTTTAGGCCTATTGGATAAGAATGTTTTTTTTTCCTAAAAAAAAGTGACCAATTGAATAAGGAGAGCGCAAAAGGCAAGTGCCTTACTGAAGGTGCTCAACTTGGGTACTTGCAAGGCATTAAGGCCTTGCCTCGCCTCACCTCTCCTCTCGCCTCAGGCAAGTGCCTGGCCGCGCCTTAACAACACTGCAGTTCACATTGAAGTTCAGTATTGTATATGAAATTAATATTTTAGTCATACAAACAGTGGGCGATATCATGATCGAAGAAGATCCCCTCCACGTTCGCCTCGATATTCACGTTCCCCAGCTCAACGACGTGGGAGGTATTCTCGTTCACCAGCACCACGCCATGCAAGGTCTAGGTCCCGTAGCTATGATTATGCATCCCAACCACCAAAACAAAGGGCTTACTCAAGGTATTTTTAAAATCTATTGCTGTTTGATATCTAGTTCTTATTATGTTTCTGAACCCTTGTTTGAGCCTCAATTTTTTTCTGTATCTCAATGCAGATCACTTTCCCCTCGTGACAGACCAGACAGTCGAGAGAGGTCTTTCCCACGACAGGAGAGCCGTGGAAGGTCATACTCCCGATCTCCACGTCTCGATGGTTCAAGGAGTAGGAGTCAAAGTCCAACACAACCTGGAAGTCGAAGTCCAAGCCCTGTAAGAGGACGAAGTCTAAGTAGGAGCAGGAGTAGGAGCAAAAGTGTTGGCCGGAGCCGGAGCCGAAGCCGTAGTCCCCGACGTAGCCCAAGACATGAAGAAGAGTATAGAAGTGAACCGAATGGTGATAGGAGCCCAAGTCAATAGGCAAACAGTTTGAAACTTGGGAAGAACTACAATGTACTATTGCCATTGTTTAGTTTGATGTTTCCGTTATAGACATCATTTCCTTAGTATTGTTGGCTAGCGTTTGTTGTTCTTGGGATTTTGTGCTTTATCAAAAATTGATTGCTGAGTACTTTCATCTTAATGCTGTCTCTGGTGGTGCAATTGACACTTCCCTATATATTTTTTGAGCTCGTTTTTGATATAGTTTGCTTTTGTATGCCACATATGTTACAACATCGGGCCTGAGATTTAAACTTCTGACCTCTAGATAAAACAAACAGTTGTAGTTTCTCAAGTTTCAAGTGATATCTGAGTGGTTGGTCCTACTTCTAATGTCTATTGTGGCTATTATACCTAACTTATATGTCTGTGTTGTTTGGAAAAATGCGTAGTTTCTTTTTTCTTTAAAATTAGAATTAGTACTTATTTCTTCATTCAATTGATTCATTTTTCTTCTTCTTCACTATTTTTCTCTCTAACATCACGGTTCGCCTTTTGGATGATCTTCTTTCTTGTTTGCTGTTTGTCATATGCCATTGTTTGTTGGAAGATCCAGTTACAGATATCCAAAGAACCCACTGAATTGGGCTCCACGGAGATCTGCCTCGAAAGGATTGGAAAGTCCTCGAATACATGGTGAATAGAGGA

mRNA sequence

ATATTTTGTTGTATTTATTTATGTGAAGCGGAAATCGGATGCCCTGAAACTTACAAATCCGAAGCAACGCCGTCTGTTTCTCCATCGAATATTTCAATTTCATCTTCTGAGCCCTAATTTCTGCTTTCTCTGCCGCCGATTCACTCTCTCTTCAGAGCTCCAGTGAGATTCTTAGACAGCGGGCCTTTGTCTTTAGTTGCTGTACTAATGAGGGGCAGGAGTTATACTCCATCGCCGCCAAGGGGTTATGGAAGAAGGGGTCGGAGCCCCAGCCCTAGGGGGCGCTATGTGGGACGTGGAAGAGACCTTCCCACCAGCCTTCTAGTTCGTAATCTTAGCCATGACTGCAGGCCTGAGGATCTTCGTAGACCATTTGGACAGTTTGGTGCTATTAAGGACATATACCTACCGAAGGATTATTATACTGGAGAACCACGCGGTTTTGGTTTTGTTCAATATGTAGATCCTGCTGATGCTGCAGATGCTAAACACCATATGGACGGCTGTGTTCTTCTCGGTCGGGAGTTGACTGTGGTATTTGCTGAAGAAAACAGGAAGAAACCATCTGATATGAGGGCCAGAGAAAGAGGAAGTGGGCGATATCATGATCGAAGAAGATCCCCTCCACGTTCGCCTCGATATTCACGTTCCCCAGCTCAACGACGTGGGAGGTATTCTCGTTCACCAGCACCACGCCATGCAAGGTCTAGGTCCCGTAGCTATGATTATGCATCCCAACCACCAAAACAAAGGGCTTACTCAAGATCACTTTCCCCTCGTGACAGACCAGACAGTCGAGAGAGGTCTTTCCCACGACAGGAGAGCCGTGGAAGGTCATACTCCCGATCTCCACGTCTCGATGGTTCAAGGAGTAGGAGTCAAAGTCCAACACAACCTGGAAGTCGAAGTCCAAGCCCTGTAAGAGGACGAAGTCTAAGTAGGAGCAGGAGTAGGAGCAAAAGTGTTGGCCGGAGCCGGAGCCGAAGCCGTAGTCCCCGACGTAGCCCAAGACATGAAGAAGAGTATAGAAGTGAACCGAATGGTGATAGGAGCCCAAGTCAATAGGCAAACAGTTTGAAACTTGGGAAGAACTACAATGTACTATTGCCATTGTTTAGTTTGATGTTTCCGTTATAGACATCATTTCCTTAGTATTGTTGGCTAGCGTTTGTTGTTCTTGGGATTTTGTGCTTTATCAAAAATTGATTGCTGAGTACTTTCATCTTAATGCTGTCTCTGGTGGTGCAATTGACACTTCCCTATATATTTTTTGAGCTCGTTTTTGATATAGTTTGCTTTTGTATGCCACATATGTTACAACATCGGGCCTGAGATTTAAACTTCTGACCTCTAGATAAAACAAACAGTTGTAGTTTCTCAAGTTTCAAGTGATATCTGAGTGGTTGGTCCTACTTCTAATGTCTATTGTGGCTATTATACCTAACTTATATGTCTGTGTTGTTTGGAAAAATGCGTAGTTTCTTTTTTCTTTAAAATTAGAATTAGTACTTATTTCTTCATTCAATTGATTCATTTTTCTTCTTCTTCACTATTTTTCTCTCTAACATCACGGTTCGCCTTTTGGATGATCTTCTTTCTTGTTTGCTGTTTGTCATATGCCATTGTTTGTTGGAAGATCCAGTTACAGATATCCAAAGAACCCACTGAATTGGGCTCCACGGAGATCTGCCTCGAAAGGATTGGAAAGTCCTCGAATACATGGTGAATAGAGGA

Coding sequence (CDS)

ATGAGGGGCAGGAGTTATACTCCATCGCCGCCAAGGGGTTATGGAAGAAGGGGTCGGAGCCCCAGCCCTAGGGGGCGCTATGTGGGACGTGGAAGAGACCTTCCCACCAGCCTTCTAGTTCGTAATCTTAGCCATGACTGCAGGCCTGAGGATCTTCGTAGACCATTTGGACAGTTTGGTGCTATTAAGGACATATACCTACCGAAGGATTATTATACTGGAGAACCACGCGGTTTTGGTTTTGTTCAATATGTAGATCCTGCTGATGCTGCAGATGCTAAACACCATATGGACGGCTGTGTTCTTCTCGGTCGGGAGTTGACTGTGGTATTTGCTGAAGAAAACAGGAAGAAACCATCTGATATGAGGGCCAGAGAAAGAGGAAGTGGGCGATATCATGATCGAAGAAGATCCCCTCCACGTTCGCCTCGATATTCACGTTCCCCAGCTCAACGACGTGGGAGGTATTCTCGTTCACCAGCACCACGCCATGCAAGGTCTAGGTCCCGTAGCTATGATTATGCATCCCAACCACCAAAACAAAGGGCTTACTCAAGATCACTTTCCCCTCGTGACAGACCAGACAGTCGAGAGAGGTCTTTCCCACGACAGGAGAGCCGTGGAAGGTCATACTCCCGATCTCCACGTCTCGATGGTTCAAGGAGTAGGAGTCAAAGTCCAACACAACCTGGAAGTCGAAGTCCAAGCCCTGTAAGAGGACGAAGTCTAAGTAGGAGCAGGAGTAGGAGCAAAAGTGTTGGCCGGAGCCGGAGCCGAAGCCGTAGTCCCCGACGTAGCCCAAGACATGAAGAAGAGTATAGAAGTGAACCGAATGGTGATAGGAGCCCAAGTCAATAG

Protein sequence

MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSPVRGRSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ*

Homology

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BLAST of CsGy1G030470 vs. ExPASy Swiss-Prot
Match: Q9SEU4 (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=3702 GN=SCL33 PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.9e-82
Identity = 190/295 (64.41%), Postives = 211/295 (71.53%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRY GR RDLPTSLLVRNL HDCR EDLR+ F QFG
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFG 60

Query: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120
            +KDIYLP+DYYTG+PRGFGFVQ++DPADAADAKHHMDG +LLGRELTVVFAEENRKKP+
Sbjct: 61  PVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPT 120

Query: 121 DMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQPPK 180
           +MRARERG GR+ DRRR+PPR   YSR         SRSP PR  RSRSRS DY S PP+
Sbjct: 121 EMRARERGGGRFRDRRRTPPR--YYSR---------SRSPPPRRGRSRSRSGDYYSPPPR 180

Query: 181 QRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSPVRG 240
            R + RS+SPR+          R + R RSYSRSP  DGSR RS +P +  SRS SP   
Sbjct: 181 -RHHPRSISPREE---------RYDGR-RSYSRSPASDGSRGRSLTPVRGKSRSLSPSPR 240

Query: 241 RSLSRSRSRSKSVGRSRSRSRSPRRS-----------PRHEEEYRSEPNGDRSPS 285
           RS+SRS  RS+S    R+RS SPRRS            R    Y  EP   RS S
Sbjct: 241 RSISRSPRRSRSPSPKRNRSVSPRRSISRSPRRSRSPRRSRRSYTPEPARSRSQS 273

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BLAST of CsGy1G030470 vs. ExPASy Swiss-Prot
Match: Q9LHP2 (Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX=3702 GN=SCL30A PE=1 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.2e-75
Identity = 181/288 (62.85%), Postives = 209/288 (72.57%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVG-RGRDLPTSLLVRNLSHDCRPEDLRRPFGQF 60
           MRGRSYTPSPPRGYGRRGRSPSPRGR+ G R  DLPTSLLVRNL HDCR EDLRRPF QF
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQF 60

Query: 61  GAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKP 120
           G +KDIYLP+DYYTG+PRGFGF+Q++DPADAA+AKH MDG +LLGRELTVVFAEENRKKP
Sbjct: 61  GPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKP 120

Query: 121 SDMRARERG--SGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQ 180
           ++MR R+RG  S R+ DRRRSP   PRYSRSP  RRGR S        RSRSR Y   + 
Sbjct: 121 TEMRTRDRGGRSNRFQDRRRSP---PRYSRSPPPRRGRRS--------RSRSRGY---NS 180

Query: 181 PPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSP 240
           PP +R  SRS+SP+DR   +E          RSYSRSP  +GSR RS SP +  S S SP
Sbjct: 181 PPAKRHQSRSVSPQDRRYEKE----------RSYSRSPPHNGSRVRSGSPGRVKSHSRSP 240

Query: 241 VRGRSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 286
              RS+S  ++RS +  ++RS+S  PR+S       R   NGDRSPSQ
Sbjct: 241 --RRSVSPRKNRSYTPEQARSQSPVPRQSRSPTPVPRGAQNGDRSPSQ 262

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BLAST of CsGy1G030470 vs. ExPASy Swiss-Prot
Match: Q1PDV2 (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=3702 GN=SCL28 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.8e-30
Identity = 111/260 (42.69%), Postives = 139/260 (53.46%), Query Frame = 0


Query: 2   RGRSYTP-----SPPR---GYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLR 61
           R RSY+P     SPPR   GY        P  R        P+ LL+RNL  D RP DLR
Sbjct: 7   RSRSYSPRPRDRSPPRERKGYDDNRLRERPSSR--DHESSGPSGLLIRNLPLDARPNDLR 66

Query: 62  RPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAE 121
             F +FG +KDIYLP++YYTGEPRGFGFV+Y    DAA+A   M+  V+ GRE+ +VFAE
Sbjct: 67  DSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIVFAE 126

Query: 122 ENRKKPSDMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHAR-SRSRSY 181
           ENRK P +MR     SGR+ D +R+  RSPR       R    SRSP  R +R S+ R  
Sbjct: 127 ENRKTPQEMRTTNGTSGRHGDYKRTSHRSPRRRYRSHSR----SRSPPRRESRHSKVRED 186

Query: 182 DYASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGS 241
           D  S   + R+ SRS  PR+  + + R+            RSPR +              
Sbjct: 187 DLYSPRRRSRSISRSPLPRNEREYKSRN-----------CRSPREE-------------- 235

Query: 242 RSPSPVRGRSLSRSRSRSKS 253
           R  +P+R R LSRSRSRS S
Sbjct: 247 RVLTPIRSRCLSRSRSRSLS 235

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BLAST of CsGy1G030470 vs. ExPASy Swiss-Prot
Match: Q8L3X8 (Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=3702 GN=SCL30 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.6e-27
Identity = 110/283 (38.87%), Postives = 144/283 (50.88%), Query Frame = 0


Query: 4   RSYTP---SPP-RGYGRRGRSPSP---------RGRYVGRGRDLPTSLLVRNLSHDCRPE 63
           R Y+P   SPP RGYG RGRSP P          G   GR      SLLVRN+  DCRPE
Sbjct: 2   RRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPE 61

Query: 64  DLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVV 123
           +LR PF +FG ++D+Y+P+DYY+G+PRGF FV++VD  DA +A+  M+     GRE+TVV
Sbjct: 62  ELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVV 121

Query: 124 FAEENRKKPSDMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSR 183
            A E+RK+P +MR + R   R  +   S  RS   SRS +  R R  R P+   +R RSR
Sbjct: 122 VASESRKRPEEMRVKTRTRSR--EPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRYRSR 181

Query: 184 SYDYASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSR---SPRLDGSRSRSQSP 243
           SY                     P  R R  P +     +YSR   SP  +G+ + +   
Sbjct: 182 SYS--------------------PAPRRRGGPPRGEEDENYSRRSYSPGYEGAAAAAPDR 241

Query: 244 TQPGSRSPSPVRGRSLSRSRSRSKSVGR--SRSRSRSPRRSPR 269
            + G        G      R   ++V R  S SRSRS   SPR
Sbjct: 242 DRNGDNEIREKPGYEAEDRRRGGRAVSRSPSGSRSRSVEVSPR 262

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BLAST of CsGy1G030470 vs. ExPASy Swiss-Prot
Match: O75494 (Serine/arginine-rich splicing factor 10 OS=Homo sapiens OX=9606 GN=SRSF10 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.3e-26
Identity = 105/252 (41.67%), Postives = 140/252 (55.56%), Query Frame = 0


Query: 36  TSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH 95
           TSL VRN++ D R EDLRR FG++G I D+Y+P D+YT  PRGF +VQ+ D  DA DA H
Sbjct: 10  TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69

Query: 96  HMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGR 155
           ++D   + GR++ + FA+ +RK P+ M+A+E          R+   S RY      RR R
Sbjct: 70  NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE---------GRNVYSSSRYDDYDRYRRSR 129

Query: 156 YSRSPAPRHARSRSRSYDYA-------SQPPKQRAYSRSLSPRDRPDSRERSFPRQESRG 215
            SRS   R +RSRS  Y+Y        S+P  +   SRS S  DR   R RSF R +S  
Sbjct: 130 -SRSYERRRSRSRSFDYNYRRSYSPRNSRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNS 189

Query: 216 RSYSRS-PRLD---GSRSRSQSPT--------------QPGSRSPSPVRGRSLSRSRSRS 263
           RS S+S P+ +    SRSRS S T              + GSR     R +   RS+S+S
Sbjct: 190 RSRSKSQPKKEMKAKSRSRSASHTKTRGTSKTDSKTHYKSGSRYEKESRKKEPPRSKSQS 249

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BLAST of CsGy1G030470 vs. NCBI nr
Match: XP_004139072.1 (serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Cucumis sativus] >KGN66890.2 hypothetical protein Csa_006988 [Cucumis sativus])

HSP 1 Score: 536 bits (1381), Expect = 1.42e-191
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60

Query: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120
           AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS
Sbjct: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120

Query: 121 DMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQPPK 180
           DMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQPPK
Sbjct: 121 DMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQPPK 180

Query: 181 QRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSPVRG 240
           QRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSPVRG
Sbjct: 181 QRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSPVRG 240

Query: 241 RSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 285
           RSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ
Sbjct: 241 RSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 285

[Close]

BLAST of CsGy1G030470 vs. NCBI nr
Match: XP_008450303.1 (PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 [Cucumis melo])

HSP 1 Score: 494 bits (1273), Expect = 3.94e-175
Identity = 271/288 (94.10%), Postives = 275/288 (95.49%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60

Query: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120
           AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS
Sbjct: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120

Query: 121 DMRARERGSGRYHDRRRSP---PRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQ 180
           DMRARERGSGR+HDRRRSP    RSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYAS 
Sbjct: 121 DMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASP 180

Query: 181 PPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSP 240
           PPKQRAYSRS+SPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRS SPT+   RSPSP
Sbjct: 181 PPKQRAYSRSVSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTR--GRSPSP 240

Query: 241 VRGRSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 285
           VRGRSLSRSRSRSKSV  SRSRSRSP+ SPRHEEEYRSEPNGDRSP Q
Sbjct: 241 VRGRSLSRSRSRSKSV--SRSRSRSPQHSPRHEEEYRSEPNGDRSPGQ 284

[Close]

BLAST of CsGy1G030470 vs. NCBI nr
Match: XP_008450302.1 (PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Cucumis melo])

HSP 1 Score: 489 bits (1258), Expect = 8.80e-173
Identity = 271/292 (92.81%), Postives = 275/292 (94.18%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60

Query: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120
           AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS
Sbjct: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120

Query: 121 DMRARERGS----GRYHDRRRSP---PRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYD 180
           DMRARERGS    GR+HDRRRSP    RSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYD
Sbjct: 121 DMRARERGSHTNSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYD 180

Query: 181 YASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSR 240
           YAS PPKQRAYSRS+SPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRS SPT+   R
Sbjct: 181 YASPPPKQRAYSRSVSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTR--GR 240

Query: 241 SPSPVRGRSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 285
           SPSPVRGRSLSRSRSRSKSV  SRSRSRSP+ SPRHEEEYRSEPNGDRSP Q
Sbjct: 241 SPSPVRGRSLSRSRSRSKSV--SRSRSRSPQHSPRHEEEYRSEPNGDRSPGQ 288

[Close]

BLAST of CsGy1G030470 vs. NCBI nr
Match: XP_038879568.1 (serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 [Benincasa hispida])

HSP 1 Score: 478 bits (1230), Expect = 1.40e-168
Identity = 266/288 (92.36%), Postives = 271/288 (94.10%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60

Query: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120
           AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MDGCVLLGRELTVVFAEENRKKPS
Sbjct: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDGCVLLGRELTVVFAEENRKKPS 120

Query: 121 DMRARERGSGRYHDRRRSPPR---SPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQ 180
           DMRARERGSGR HDRRRSPPR   SPRYSRSPAQR  RYSRSP PRHAR+RSRSYDYAS 
Sbjct: 121 DMRARERGSGRLHDRRRSPPRYSRSPRYSRSPAQRHARYSRSPPPRHARTRSRSYDYASP 180

Query: 181 PPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSP 240
           PPKQ+AYSRS+SPRDRPDSRERSFPRQ+SRGR  SRSPRLDGSRSRSQSP + GSRSPSP
Sbjct: 181 PPKQKAYSRSVSPRDRPDSRERSFPRQQSRGRP-SRSPRLDGSRSRSQSPARAGSRSPSP 240

Query: 241 VRGRSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 285
           VRGRSLSRSRSRSKSV  SRSRSRSPR SPRHEE YRSEPNGDRSPSQ
Sbjct: 241 VRGRSLSRSRSRSKSV--SRSRSRSPRLSPRHEE-YRSEPNGDRSPSQ 284

[Close]

BLAST of CsGy1G030470 vs. NCBI nr
Match: XP_038879567.1 (serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Benincasa hispida])

HSP 1 Score: 472 bits (1215), Expect = 3.12e-166
Identity = 266/292 (91.10%), Postives = 271/292 (92.81%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60

Query: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120
           AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MDGCVLLGRELTVVFAEENRKKPS
Sbjct: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDGCVLLGRELTVVFAEENRKKPS 120

Query: 121 DMRARERGS----GRYHDRRRSPPR---SPRYSRSPAQRRGRYSRSPAPRHARSRSRSYD 180
           DMRARERGS    GR HDRRRSPPR   SPRYSRSPAQR  RYSRSP PRHAR+RSRSYD
Sbjct: 121 DMRARERGSHTNSGRLHDRRRSPPRYSRSPRYSRSPAQRHARYSRSPPPRHARTRSRSYD 180

Query: 181 YASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSR 240
           YAS PPKQ+AYSRS+SPRDRPDSRERSFPRQ+SRGR  SRSPRLDGSRSRSQSP + GSR
Sbjct: 181 YASPPPKQKAYSRSVSPRDRPDSRERSFPRQQSRGRP-SRSPRLDGSRSRSQSPARAGSR 240

Query: 241 SPSPVRGRSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 285
           SPSPVRGRSLSRSRSRSKSV  SRSRSRSPR SPRHEE YRSEPNGDRSPSQ
Sbjct: 241 SPSPVRGRSLSRSRSRSKSV--SRSRSRSPRLSPRHEE-YRSEPNGDRSPSQ 288

[Close]

BLAST of CsGy1G030470 vs. ExPASy TrEMBL
Match: A0A0A0LZX6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G630290 PE=4 SV=1)

HSP 1 Score: 536 bits (1381), Expect = 5.05e-190
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG
Sbjct: 119 MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 178

Query: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120
           AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS
Sbjct: 179 AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 238

Query: 121 DMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQPPK 180
           DMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQPPK
Sbjct: 239 DMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQPPK 298

Query: 181 QRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSPVRG 240
           QRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSPVRG
Sbjct: 299 QRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSPVRG 358

Query: 241 RSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 285
           RSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ
Sbjct: 359 RSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 403

[Close]

BLAST of CsGy1G030470 vs. ExPASy TrEMBL
Match: A0A1S3BPL2 (serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491955 PE=4 SV=1)

HSP 1 Score: 494 bits (1273), Expect = 1.91e-175
Identity = 271/288 (94.10%), Postives = 275/288 (95.49%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60

Query: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120
           AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS
Sbjct: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120

Query: 121 DMRARERGSGRYHDRRRSP---PRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQ 180
           DMRARERGSGR+HDRRRSP    RSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYAS 
Sbjct: 121 DMRARERGSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASP 180

Query: 181 PPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSP 240
           PPKQRAYSRS+SPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRS SPT+   RSPSP
Sbjct: 181 PPKQRAYSRSVSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTR--GRSPSP 240

Query: 241 VRGRSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 285
           VRGRSLSRSRSRSKSV  SRSRSRSP+ SPRHEEEYRSEPNGDRSP Q
Sbjct: 241 VRGRSLSRSRSRSKSV--SRSRSRSPQHSPRHEEEYRSEPNGDRSPGQ 284

[Close]

BLAST of CsGy1G030470 vs. ExPASy TrEMBL
Match: A0A1S3BNX5 (serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491955 PE=4 SV=1)

HSP 1 Score: 489 bits (1258), Expect = 4.26e-173
Identity = 271/292 (92.81%), Postives = 275/292 (94.18%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60

Query: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120
           AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS
Sbjct: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120

Query: 121 DMRARERGS----GRYHDRRRSP---PRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYD 180
           DMRARERGS    GR+HDRRRSP    RSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYD
Sbjct: 121 DMRARERGSHTNSGRFHDRRRSPLRYSRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYD 180

Query: 181 YASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSR 240
           YAS PPKQRAYSRS+SPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRS SPT+   R
Sbjct: 181 YASPPPKQRAYSRSVSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSDSPTR--GR 240

Query: 241 SPSPVRGRSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 285
           SPSPVRGRSLSRSRSRSKSV  SRSRSRSP+ SPRHEEEYRSEPNGDRSP Q
Sbjct: 241 SPSPVRGRSLSRSRSRSKSV--SRSRSRSPQHSPRHEEEYRSEPNGDRSPGQ 288

[Close]

BLAST of CsGy1G030470 vs. ExPASy TrEMBL
Match: A0A6J1DIJ4 (serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020794 PE=4 SV=1)

HSP 1 Score: 448 bits (1152), Expect = 4.46e-157
Identity = 250/290 (86.21%), Postives = 257/290 (88.62%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRD--LPTSLLVRNLSHDCRPEDLRRPFGQ 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRY GRGRD  LPTSLLVRNL HDCRPEDLRR FGQ
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYGGRGRDRDLPTSLLVRNLRHDCRPEDLRRQFGQ 60

Query: 61  FGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKK 120
           FGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MDGCVLLGRELTVVFAEENRKK
Sbjct: 61  FGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDGCVLLGRELTVVFAEENRKK 120

Query: 121 PSDMRARERGSGRYHDRRRSPPR---SPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYA 180
           PSDMRARERGSGR+HDRRRSPPR   SPRYSRSPA R  RYSRSPAPRHARSRSRSYDY 
Sbjct: 121 PSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAPRHARYSRSPAPRHARSRSRSYDYT 180

Query: 181 SQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSP 240
           S PPKQRA SRS+SPRDR DSRERS+PRQ SRGRSYS+SPRL+GSRSRSQSP + GSRS 
Sbjct: 181 SPPPKQRACSRSVSPRDRRDSRERSYPRQPSRGRSYSQSPRLNGSRSRSQSPARGGSRSQ 240

Query: 241 SPVRGRSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 285
           SP RGRS SRS SRS          RSPRRSPRHEEEYRS+PNGDRSPSQ
Sbjct: 241 SPARGRSRSRSVSRS----------RSPRRSPRHEEEYRSDPNGDRSPSQ 280

[Close]

BLAST of CsGy1G030470 vs. ExPASy TrEMBL
Match: A0A6J1DH06 (serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020794 PE=4 SV=1)

HSP 1 Score: 442 bits (1137), Expect = 9.90e-155
Identity = 250/294 (85.03%), Postives = 257/294 (87.41%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRD--LPTSLLVRNLSHDCRPEDLRRPFGQ 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRY GRGRD  LPTSLLVRNL HDCRPEDLRR FGQ
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYGGRGRDRDLPTSLLVRNLRHDCRPEDLRRQFGQ 60

Query: 61  FGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKK 120
           FGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MDGCVLLGRELTVVFAEENRKK
Sbjct: 61  FGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDGCVLLGRELTVVFAEENRKK 120

Query: 121 PSDMRARERGS----GRYHDRRRSPPR---SPRYSRSPAQRRGRYSRSPAPRHARSRSRS 180
           PSDMRARERGS    GR+HDRRRSPPR   SPRYSRSPA R  RYSRSPAPRHARSRSRS
Sbjct: 121 PSDMRARERGSRTNSGRFHDRRRSPPRYSRSPRYSRSPAPRHARYSRSPAPRHARSRSRS 180

Query: 181 YDYASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPG 240
           YDY S PPKQRA SRS+SPRDR DSRERS+PRQ SRGRSYS+SPRL+GSRSRSQSP + G
Sbjct: 181 YDYTSPPPKQRACSRSVSPRDRRDSRERSYPRQPSRGRSYSQSPRLNGSRSRSQSPARGG 240

Query: 241 SRSPSPVRGRSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 285
           SRS SP RGRS SRS SRS          RSPRRSPRHEEEYRS+PNGDRSPSQ
Sbjct: 241 SRSQSPARGRSRSRSVSRS----------RSPRRSPRHEEEYRSDPNGDRSPSQ 284

[Close]

BLAST of CsGy1G030470 vs. TAIR 10
Match: AT1G55310.1 (SC35-like splicing factor 33 )

HSP 1 Score: 306.6 bits (784), Expect = 2.1e-83
Identity = 190/295 (64.41%), Postives = 211/295 (71.53%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRY GR RDLPTSLLVRNL HDCR EDLR+ F QFG
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFG 60

Query: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120
            +KDIYLP+DYYTG+PRGFGFVQ++DPADAADAKHHMDG +LLGRELTVVFAEENRKKP+
Sbjct: 61  PVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPT 120

Query: 121 DMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQPPK 180
           +MRARERG GR+ DRRR+PPR   YSR         SRSP PR  RSRSRS DY S PP+
Sbjct: 121 EMRARERGGGRFRDRRRTPPR--YYSR---------SRSPPPRRGRSRSRSGDYYSPPPR 180

Query: 181 QRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSPVRG 240
            R + RS+SPR+          R + R RSYSRSP  DGSR RS +P +  SRS SP   
Sbjct: 181 -RHHPRSISPREE---------RYDGR-RSYSRSPASDGSRGRSLTPVRGKSRSLSPSPR 240

Query: 241 RSLSRSRSRSKSVGRSRSRSRSPRRS-----------PRHEEEYRSEPNGDRSPS 285
           RS+SRS  RS+S    R+RS SPRRS            R    Y  EP   RS S
Sbjct: 241 RSISRSPRRSRSPSPKRNRSVSPRRSISRSPRRSRSPRRSRRSYTPEPARSRSQS 273

[Close]

BLAST of CsGy1G030470 vs. TAIR 10
Match: AT1G55310.2 (SC35-like splicing factor 33 )

HSP 1 Score: 295.4 bits (755), Expect = 4.8e-80
Identity = 167/239 (69.87%), Postives = 186/239 (77.82%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRY GR RDLPTSLLVRNL HDCR EDLR+ F QFG
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFG 60

Query: 61  AIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPS 120
            +KDIYLP+DYYTG+PRGFGFVQ++DPADAADAKHHMDG +LLGRELTVVFAEENRKKP+
Sbjct: 61  PVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPT 120

Query: 121 DMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQPPK 180
           +MRARERG GR+ DRRR+PPR   YSR         SRSP PR  RSRSRS DY S PP+
Sbjct: 121 EMRARERGGGRFRDRRRTPPR--YYSR---------SRSPPPRRGRSRSRSGDYYSPPPR 180

Query: 181 QRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSPVR 240
            R + RS+SPR+          R + R RSYSRSP  DGSR RS +P +  SRS SP +
Sbjct: 181 -RHHPRSISPREE---------RYDGR-RSYSRSPASDGSRGRSLTPVRGKSRSLSPTQ 217

[Close]

BLAST of CsGy1G030470 vs. TAIR 10
Match: AT1G55310.3 (SC35-like splicing factor 33 )

HSP 1 Score: 293.1 bits (749), Expect = 2.4e-79
Identity = 190/308 (61.69%), Postives = 211/308 (68.51%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFG 60
           MRGRSYTPSPPRGYGRRGRSPSPRGRY GR RDLPTSLLVRNL HDCR EDLR+ F QFG
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFG 60

Query: 61  AIKDIYLPKDYYTG------------EPRGFGFVQYVDPADAADAKHHMDGCVLLGRELT 120
            +KDIYLP+DYYTG            +PRGFGFVQ++DPADAADAKHHMDG +LLGRELT
Sbjct: 61  PVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELT 120

Query: 121 VVFAEENRKKPSDMRARERGSG-RYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARS 180
           VVFAEENRKKP++MRARERG G R+ DRRR+PPR   YSR         SRSP PR  RS
Sbjct: 121 VVFAEENRKKPTEMRARERGGGSRFRDRRRTPPR--YYSR---------SRSPPPRRGRS 180

Query: 181 RSRSYDYASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSP 240
           RSRS DY S PP+ R + RS+SPR+          R + R RSYSRSP  DGSR RS +P
Sbjct: 181 RSRSGDYYSPPPR-RHHPRSISPREE---------RYDGR-RSYSRSPASDGSRGRSLTP 240

Query: 241 TQPGSRSPSPVRGRSLSRSRSRSKSVGRSRSRSRSPRRS-----------PRHEEEYRSE 285
            +  SRS SP   RS+SRS  RS+S    R+RS SPRRS            R    Y  E
Sbjct: 241 VRGKSRSLSPSPRRSISRSPRRSRSPSPKRNRSVSPRRSISRSPRRSRSPRRSRRSYTPE 286

[Close]

BLAST of CsGy1G030470 vs. TAIR 10
Match: AT3G13570.1 (SC35-like splicing factor 30A )

HSP 1 Score: 284.6 bits (727), Expect = 8.5e-77
Identity = 181/288 (62.85%), Postives = 209/288 (72.57%), Query Frame = 0


Query: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRYVG-RGRDLPTSLLVRNLSHDCRPEDLRRPFGQF 60
           MRGRSYTPSPPRGYGRRGRSPSPRGR+ G R  DLPTSLLVRNL HDCR EDLRRPF QF
Sbjct: 1   MRGRSYTPSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQF 60

Query: 61  GAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKP 120
           G +KDIYLP+DYYTG+PRGFGF+Q++DPADAA+AKH MDG +LLGRELTVVFAEENRKKP
Sbjct: 61  GPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKP 120

Query: 121 SDMRARERG--SGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSRSRSYDYASQ 180
           ++MR R+RG  S R+ DRRRSP   PRYSRSP  RRGR S        RSRSR Y   + 
Sbjct: 121 TEMRTRDRGGRSNRFQDRRRSP---PRYSRSPPPRRGRRS--------RSRSRGY---NS 180

Query: 181 PPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGSRSPSP 240
           PP +R  SRS+SP+DR   +E          RSYSRSP  +GSR RS SP +  S S SP
Sbjct: 181 PPAKRHQSRSVSPQDRRYEKE----------RSYSRSPPHNGSRVRSGSPGRVKSHSRSP 240

Query: 241 VRGRSLSRSRSRSKSVGRSRSRSRSPRRSPRHEEEYRSEPNGDRSPSQ 286
              RS+S  ++RS +  ++RS+S  PR+S       R   NGDRSPSQ
Sbjct: 241 --RRSVSPRKNRSYTPEQARSQSPVPRQSRSPTPVPRGAQNGDRSPSQ 262

[Close]

BLAST of CsGy1G030470 vs. TAIR 10
Match: AT5G18810.1 (SC35-like splicing factor 28 )

HSP 1 Score: 132.9 bits (333), Expect = 4.1e-31
Identity = 111/260 (42.69%), Postives = 139/260 (53.46%), Query Frame = 0


Query: 2   RGRSYTP-----SPPR---GYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLR 61
           R RSY+P     SPPR   GY        P  R        P+ LL+RNL  D RP DLR
Sbjct: 7   RSRSYSPRPRDRSPPRERKGYDDNRLRERPSSR--DHESSGPSGLLIRNLPLDARPNDLR 66

Query: 62  RPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAE 121
             F +FG +KDIYLP++YYTGEPRGFGFV+Y    DAA+A   M+  V+ GRE+ +VFAE
Sbjct: 67  DSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIVFAE 126

Query: 122 ENRKKPSDMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHAR-SRSRSY 181
           ENRK P +MR     SGR+ D +R+  RSPR       R    SRSP  R +R S+ R  
Sbjct: 127 ENRKTPQEMRTTNGTSGRHGDYKRTSHRSPRRRYRSHSR----SRSPPRRESRHSKVRED 186

Query: 182 DYASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSYSRSPRLDGSRSRSQSPTQPGS 241
           D  S   + R+ SRS  PR+  + + R+            RSPR +              
Sbjct: 187 DLYSPRRRSRSISRSPLPRNEREYKSRN-----------CRSPREE-------------- 235

Query: 242 RSPSPVRGRSLSRSRSRSKS 253
           R  +P+R R LSRSRSRS S
Sbjct: 247 RVLTPIRSRCLSRSRSRSLS 235

The following BLAST results are available for this feature:

BLAST of CsGy1G030470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEU4	2.9e-82	64.41	Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=...	[more]
Q9LHP2	1.2e-75	62.85	Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX...	[more]
Q1PDV2	5.8e-30	42.69	Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=...	[more]
Q8L3X8	1.6e-27	38.87	Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=...	[more]
O75494	1.3e-26	41.67	Serine/arginine-rich splicing factor 10 OS=Homo sapiens OX=9606 GN=SRSF10 PE=1 S...	[more]

BLAST of CsGy1G030470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139072.1	1.42e-191	100.00	serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Cucumis sativu...	[more]
XP_008450303.1	3.94e-175	94.10	PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 [Cuc...	[more]
XP_008450302.1	8.80e-173	92.81	PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Cuc...	[more]
XP_038879568.1	1.40e-168	92.36	serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 [Benincasa hisp...	[more]
XP_038879567.1	3.12e-166	91.10	serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Benincasa hisp...	[more]

BLAST of CsGy1G030470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZX6	5.05e-190	100.00	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G630290 PE=4 SV...	[more]
A0A1S3BPL2	1.91e-175	94.10	serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 OS=Cucumis melo...	[more]
A0A1S3BNX5	4.26e-173	92.81	serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 OS=Cucumis melo...	[more]
A0A6J1DIJ4	4.46e-157	86.21	serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 OS=Momordica ch...	[more]
A0A6J1DH06	9.90e-155	85.03	serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 OS=Momordica ch...	[more]

BLAST of CsGy1G030470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55310.1	2.1e-83	64.41	SC35-like splicing factor 33	[more]
AT1G55310.2	4.8e-80	69.87	SC35-like splicing factor 33	[more]
AT1G55310.3	2.4e-79	61.69	SC35-like splicing factor 33	[more]
AT3G13570.1	8.5e-77	62.85	SC35-like splicing factor 30A	[more]
AT5G18810.1	4.1e-31	42.69	SC35-like splicing factor 28	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 37..110 e-value: 4.1E-21 score: 86.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 38..107 e-value: 1.1E-18 score: 66.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 36..114 score: 17.114126
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 30..142 e-value: 7.3E-27 score: 96.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..278
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 1..227
None	No IPR available	PANTHER	PTHR23147:SF149	SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL30A	coord: 1..227
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 36..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G030470.2	CsGy1G030470.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding