CsGy1G030430 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G030430
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionsuccinate dehydrogenase subunit 6, mitochondrial
LocationGy14Chr1: 28706573 .. 28715612 (-)
RNA-Seq ExpressionCsGy1G030430
SyntenyCsGy1G030430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAGCTAGAAGAGAGAACAGCTTTGAGGATTCTGATTTCAATCGGATTTAGCTTCTAAAATCTCAATCTTAATCTGTTTTTTGAGGGAGCAATCATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAGTTTTGGTCCGACAGATTCTCCATTCTCGACAACTATAGCCCCTACGTTCAGCGCCAGACCCCTCTTCCTTCATGGTCTTCCTCCGATGTCGAGGAATTTATTGCTTCTGATCCCGTTCATGGCCCCGTTGTAATTCATCCTTCACTTCTTTTCCTCTTTTGCTTCTTTTACTTCTTCTATTGCCTGCTTCTGAGTTGATGTCACTCGGTGTTTCATATCATCTCGGTTGTTTTTTTTTTATCCATTCTTAGATTCGTATATCTGAAATTAAATGTGTTCAATAATAGTGGGGTTTATTTTTCCTTTGAGCTTGGGATGATCTGAAATTTCCTTGCCCAGTGAGTGTTGATACCCGATGGCCTGAGTTATAATATAGCATAACTCTTAGTAGGGAACTGGACCAAATATTTCCTTTTTGAATAATTTTTATGGTTTGTTGCTGTCAATTTTGGAAGTACATTTAAAAAAAAAAAAAGAAAAATTGGATAGAAGGAACGATTTCATTGATAAATGAAATAAAGGAATAAAAACTCGTTATTGGTGAGTTACAAGAAAGAAGATCAATTGGAGATGAAAAAAGATGAGCTATGAAGTGCAAAATAGTGCTGATTTTTACACCAAAAGAAAGCAGTAGAAAGAACCCTATCCATAAAGCGCTCAAAAGAAGAGGATACACCATTCCGTTCTCCTCATAGATGCCAGAAGAACATACGGATAAGAGGCAACCAAAGAGTCTTCCTCAAACAACAAAATGGGTTCCCGCCAAACAAAAGCAAGGTGATCATAATTCACAGACCAACCAAAAGCTTCCAAAAGTATGTACCAAAAACGAGATGCAAAAGGATAATGCATAAAAAGATGACTAAGAGATTTAGCATTTGAATTGCACATAACACACCAAGATGCTGTCAAACGCATGATAAGGGGATCTGCTTTCATTTTAGAAGTACCTAACAGTAGTCTTTTGAAACCATTTCTATCATAACAAGTGAAATAATGTTTTCCTTTCGATTTTTTTTTTATATTTGTGAGTGTCCGGGCCAGCTTACGTGCACCTTAACTAATTTCATGGATCAACCCACCTGACTCTACAACATTTGGGTGTAAGAGAAACTCATAGAAAATTAATTCTTAGGTAAGTGGCTACCATAAATTGAACCCATGACCACTTTATTAGTTTTTTTTACCATTGGCCAATCCATCATGGTTTATTTTTCTTTTGAATTGGAATGTTATATTACATTCTTACAATAAAATTAATGCATTTTATTTTAACTCTTCGTTTTCTACTTAGTGTTACTTTGCTGTTTGCACTCATAATATATTGCAATTGTCTATCCTCAGAGTTTGTTATCAGTGTGTTTAATAAAGTACCTAAGAACCATATTGGTAAATGGTATTGGTTGTTATCATGCTGATTGATAGAACCTTGTAGTGCAGCGCTAGCTTATATTTGCCTGTGATTTTCCTGCCAAGACAAGGCTTTTTGATTCTCTCTCTGGTCCTATTATGTCCTGGTTTTTGTTGCTTGTGGCTGATAAACTGATTTTTTCTCTTTTCACTGTCTTCTAACCTTCAGCTATAAAAACAATTTCCAGTTTATTTTCAGTTATGATCTAGAGTCTAGATTATTATTATACTGCCTGTAATGCTAAATAGTTAGATCATGGATTCATTATATGATCTCGTGCCTTCTTAAGTTCAACTACTTGGCCGGGGTGTTTGCTCTATTCTTTTTCTGTTTAGTGTATTCCTAAACATTCTTCAGGATGAAATTTCGAAACTACTTAAGCCGCATATCACATTAAAAACAGTCGGGTTAAGCATGGTTCTCGTTATGTTTCACATTTTTAAAACATAGCGGGAAGGCAAAGGCAGATTCCTTAACTTTCTGTTACTAAGAGTTCATGTATATGCTTCTAGATTCCTCATTCATTGGCTGCTTATTATTCCTTTTTCAGTTGAAAACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATTGGAGCTGTCTCGACTGCAGGTGTTGCATGGAAATACTCAAGAAGTTTACATGGTATTCAACTCACTTGTCTTTCCATTTAACTGCCTGCTTCATATCAGTAAAGGAATACCAGTAGAATTCAAAATATTCATTTACTTTACTACTGCTGACATTAGCAATTGTTTATTATTTTTTAATTTTAAGTATAACATGGTTCAACGAAATCTGCAGTCACATCTCTTCAAGTTACATTCCTTTTCTTGTTTCCATCTTTATGCAAGTTAAAATGACTTTTTCAACCAATGCAGCACATTGTTATTTTCTTTGGCTAAAAGTAAAACCTTTGGTGGTACTATACTATACTTACCACTCAAATAGGTTATGAGTTTGGTTGACATGAACATATACAGTATACTTGCTTAAAGCAATTTGCGATTTATTTAATAGGGGGATATATTGATTAGTCCCAAGTTAGGAAAGTGTAATGTCATGTTGTAGAATACTGAGATCCTTAAGGCTCCAATTCTTGTTTAGGAGCTGGCTTTGTTTGTCAAGATCTTAAGAATCTTTTTTGTTTAAATCTGCTGCGTCCAAGCAAACGAACTATCTTGGTGAAATGTTTACTATGAGCATTGTGTTCTACATCATACCAAAGCCACAAGTTTCATCATACCAAAACCAGAAGATTCAGCAGTGAAGAGTTAGCGCAACATAGCATTCATACAGTAGAAGAAGACACAAGACAGTGATTTATTGGGGGAAGCGTATAAGTCAATCCTCCTTCAGCACGAGCAACTTCCACCCTCCCAAATCCCTTCTAAGTTCAGCTCTCTTGTCGATACGTGTGGTCTACAACTGCAGGTAATCTCCTTCCCTTGACCATGAAGATTCTATCCTGGAATACAATGATAAAATAAGGCAACAGCGCTGAAGCATTTCTTACAATCTATTTATTCGTACATAGTTCTAATCCAAGAATCGAAGAAGTCGGACATTGATCACCAATTCATCAAATAAATTTGGAGTTCAAATGGAATCGGCTGGACATTTGTAGAGGATTTTGGAAGATCGGGTGGCATGCTTACAACATGGGACAAAAGCATGGTTGCTCAATTGAATTCCTCAAGGCGGGTATTCTTTTTCAGTAAAATTCAAGATTCAATGCAACAATGTCTGTTGGGTGACCAATATATGGAGCAACTCTAATTACAGAGAAAGGAAATTCCTCTGGCCGGAACTGATTTCTCTATCACATTACTGTTTGGAACCATGGTGCTTAGGAGAAGACTTCAATATAACCAGATGAGCCCATGAAAGATCCCCATTGGGTAGGACAACAAAGGGAATGAAAAAGTTCAACAATTTCATCAAGGAAGCTGCCTTATAGGGCATACCCTTATCAAATGGACTGTTTACTTGGTCTAGAAAAGGAATTTCAAATTCACATTCTCTAATTCTTTGTTTCCTTGTTACCAAGAACTGGGACGACTTACTTCCAATTCCACTGTCAATCGAATAGCAAGAATTTTTTCAGATTGTTTTCCACTGCTAATGGAAACATGTTCGATAAGCTGGGCCTTAGTCCTTTCCGTTTCTGTAACAGCTGGTTGTTTCCAGATTGCATAAGAGAAATTTGTAAAACGCTAGAAGAAGAACAATCAAATGGTTGGGCAGGATTTGTCTTAAATCTCAAACTTCGGAAAGTAAGGAGAAAGTATGGTCCACTGACTATGTAAAAGAAAGACAAGGGAAAGAGAATGATCTTATTCCAGAGTTGAGATTCTTTGATGCAAAGGCTGGATAGAGTAAAAGCATGGTCCACTGACTATGTAAAAGAAAGACAAGGGAAGAGAATGATCTTATTCCAGAGTTGAGATTCTTTGATGCAAAGGCTGAATAGAGTAGACTGTCTTTGACAGAGTATATTCATCTTGCAGTCAAAGGAGCTTTAATAACATTGCATTCCTTGGAAGAAAGAAATTTGATTCAGAAAGACAAATTGAATTGGTTGAGGTTGGGCAATGAGAATCATCCTTCTTCCATCGTTTCCCTGCAGCAAAAAAAAGGCGAAATCGTTTTCCTGAAATATTCTCTTCAGAAGAAGAACCAATAACCTCATTCAGAGCCGTTGAAGGTGAAATTCTGCATTATTTTGAACCCCTCTACAAAAAAGCTCACAGGCCCTAGAATCTTCCGCTCCAATCTATTTTGGAAACAGGTTGGTGCATCTCAAAATTCCTTCCTGATAACATCATTCAATGGGGAAGAAATCCTATAAGCCATAAAAGCTCTTGGGAAAAATAAGGCACCAGGTTCCGACAGTTTCACAGTGGAACTCTTCCTAGAATATTAGAATTTTTTCAAAGAGGTCTTCCAAAAATGTTCAACGAATTTGTGAAAATGGAAAACTATCTGTCTTGTTCCAAAAAAAGGAAGAATCCCTCAAAGATTTTCAGCCCATTAGTCTGACCACTTCTTCCTATAAAATCATTACCAAAGTCTTGGCAGAAAGAGTGAAGAAAGTCATGCCCTCAATAATAGCAAATATTCAAAGTGCTTTCTATAAGAGACAGCCAAATTTTGGATCCAATCCTTATAGCAAACGAGGTAGTGAAGGACTACCGAGCAAGGAAGAAAAAAGGTTGGATTCTCAAAATTGACCTCGAAAAGGCATTTGACTGAGTAAACTGTAGTTTTCTAGACAACACCCTCAAGCATATGGGTTTTCATCCAAAATGGATTGAATGGACAAATGTATGTATCCGACACCCAAAATTCTTGATCTTTATTAATGGTCGACCGCAAGGCTTCATCCAAGCATCAAAAGGTATACCCCAAGGAGATACACTATCCCCCTTCTTATTTCTTCTAATCAGTGAGGTTCTCAGCCTATTAATCTCACAGGCACATCAGAGTGGTTTATTCGAAGGGTTTACGGTTGGGACAGACAAAATCCACCTCTCCATCTGATAAGCGCATAAAATGTGCTTATTTTTACTTCTTATTTAGGGTTGATTTTATTGGATTTAATTTGTTTGATAGTGTTTCTTAGCAAATTATGGCTAATTTATCATTTTGGATAAAAATACACGAAAACGGGCAAACCCAAGTTAATTGGAACAAAAATGAAGGAAATATGTGAAATTAAGAAAATTTCTCTAGAAGAAGGGCTGTGTTGCAATGCTACCTATAGAGTTGCAATGACGCCCACAAGGAGATGATGCGTCGAGTGGTCCCATGCGTCTGATGAGTAGGCGTCAAAAGTAGACAGCGTTGCAACGTTGTGCACTTAGTGCACTCAGCAAACAATTAGTGCGGTTGTGAAGATGCTCTACAACGTCACACTGCACCTATAGCGTTGCAAGGCTCTCCCTGTCCAACATGTATAAATAGGGCTTCAATTTGTCATTTTAAGCTTCCCATTTGATTCCAAAACATTCCAATCACGGGAATTTCTCCTCCTCCATACTTTCTTTCTTTTGTGCTACTTAGAATAGTGTTTCGTAGCAAATTATGGCTAATATTATTAGTCTTCTTTATTCAACTCAATTGAAACAAACCTAACCTCATTTTCCATTGCCTTAGATAAAATTAATTCGATTCTTGAATAGCTAAGTTAAAACCTAATTTTGATCCTTGAGGACGATACTCGTCCTTCTAAGCGGTTTTATTGCAACTTGACCATGTCCAATTGCTTGACCCCACATCACCATCCTCCAATTTGCCGATGACACACTTCTGTTTAGTCAATACAACGAGACATCTTTGAACAATCTTATTGATACAGTTGGTTTCTTTTAATGGTGTTCCGGTCAGAAAGTAAATTGGGAAAAATCAGCTCTATACGGAGTCAACATTGGCGCTTCCACTATCCAATCAACAGCTGTTCGAATGGGTTGTACAACTGGTTCCATTCCATTCACTTGCTTGGACTACCTCTAGGAGGTTATCCTAAAAAGCTATCCTTCTGGCAGCCTGTCATCGATAAAATTCATCTGAAACTCGATTGTTGGAATAAGTATAATCTATCTAGAGGTGGCTGCCTAACACTTTGCAATGCAGTTTTTGCTAACCTTTCAACCTATTATTTATCTTTCTTACAAATGATGAGGTCAGCAATCACAGAATTGGAAAAAATAATGTCCATTTTTTTCTGGGAAGGACAAAAAGGCAGCAAGCTAAACCACCTTGTGAAATGGAGCACCGCATCAAAAGCTTTATCTGATGGGGGTCTTGGCTTGGGAAATCTGAAAAACAGGAACTTAGCCTTGCCGTTCAAATGGAATTGGCGTTTTTTAAGGAACCAGAGGCATTTTACTGCAAGATCGTCAAAAGTATACATGGCAGTGGCACTGATGAATTTGAATGGCATTCCTTTGGGAAGTTTGGGCTTAGTTTATGCTGCCCATGGATTAGTATCTAAAAAATATGGTCAAAATTTAATCATTTTGCAACCTTTAAATTGGGTGATGGAAGAAGAATTGCATTCTGGGAAGCTCCTTGGTGCTCGGAACAGTCAATAAAACAGGTTTTTCCTAATCTGTACCGTATTGCAACCAACAAAGAAGGCAATGAATGATCTCATTGGGACCCTGCAACTCCATCCTGGAATCCTTCTTTTCGATGTGCTCTAAAAATGAAGAAATTGCAGATTTTCAAGCACTTCTATCTAGCATCCATGGTAAAACTCTATCCCATGCAGCAGATTCTAGACTTTGGTTATTGGATTCCTCAGGTAAGTTCACCGTTAAATCCCTTTCCCAGTTTCTAACTGCCTTGCATTCTCTTGAAAAGAACATCTATCAAGCAACATGGAAATCAAAAAGTCCCAAAAGAGTGAACGTTCGAATTTGGGTAATGCTTTTTGGATCACTTAATTGCTCGGTCACTCTTCAATCAAAACTCCAAGGCCCTGCAATTTCCCCCTCCATTTGTCCACTTTGTAAAGCTTCTGGAGAGGATCTATAACATCTTTTCTTCGAATGCTCATTCTCTGGTAAGTGTTGGTGGAAACTATTTTCCCTTTTTAACTTGCAATGGGTCTTTGGACAATCCTTCAAAGACAATGTGCTTCAAGTTCTCAGCAGTCCACATTTACCTCCAAAAGCACAAACGCTATGGTTTAATGCAGTTAAAGCCTTTCCTCCAAAAGCACAAATGCTATGGTATAATGTGAATGCGGTTAAAGCCTTTCTCTTAGCACTCTGGTTCATACGAAATCATGGAGTTTTTCATGACAAATTCTATGACTGGTCAGATCGTTTTGCCTCAGCTCGCCTTCTTGCTTCGTCTTGGTGCTCTGTATCTAAATTGTTTGGTGATTACTCAATTCAAGACATATGCCTCAATTGGACTGTGTTCATAACCTCTATCTAATTTCCCTAGGTTCTAGTAATTTATGTTTCGATATTATGTGAGTAGGCCTCTTTTTGGTATTCACGAGGTGTATTGTACTTTTTCCTTTGAATCCCATTGTATCTGTCATCTGAATTCATGCCTCAGATTTCATCAATACAATCTGTTTCCTTTTCAAAAAACAAAAAAAGAAGGAAGGAAAAAGAGCATTGTGTTCTATGTATAAAGATGCATAAAATGCTAGTTAACGATTGGTGTGCTTACTCCGTAGTTGTGTTTTGACAGGCGCTGGGCTGTCGTTCCTTGCGGGGGGTGTATTCGGTTGGACTTTTGGCCAAGAGATCGCAAATCATTGGTATCAACTCTACAGGGTGGATACCATGGCTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAAGTTCTTAAAACTCTGATTTGCGTTGAAGCAGCAGAGCGGCAAACACTGCAGCTGCCATCTAAAATAAAAATGTAAGTGCCACCTGTTGAAATACAATGGTTGATTGGTTTGTTTTGTGATGAACTCTTCTTCCAACCTTTCAAGTTTAGAAAAGTACTCTCCTTTTTTATCTTCTGGAAATGACTCATTCATTTGCAAGCTTGTTAGAGAATGTACCCATCTTTACCAAATAAACTCAATCTTGGAGGTTAGTTAGGGTCTAAAGCATGTCCAAAATGGATACACTTGAAAGAATATTGGCTAAACTATAAAATAGGTAACCTTGAACTGTGCTTTGGTTTTAAAAAAAAACTGCAAAGTTGCAATAATATGCTTTGGGTTTTTAAAAATGTTTTAAAACTATCCTTAAGAGTAGAAGTTTGATTGAAAGAAACTGAAATTTGGAATGGTGTGGCAGTGATCTAGGATGAAAGTTGAGACTGATGCACTATTTCAGATCATTTTGTCACAGTATCATGTTTCAATTTTTGCTAAATAATATTCCAATGGATGTCCATCCCAAGGTAGGATAAGTTTTGAAATGTTTATGTAAAGACAAATGTATTGTTGTAATTTTGAAAGAAATGACAGTTTGGAGATGTTTTTATAATTTATCAAATTCCACTCTCATTCCACATGTTTTTTTCTCTTTTGAAAGTATTGTTGTTTTGCATATCCTTACTTTCAAAATGCCAAGCATGAAAATAACCCTATTAAATCTTTCCATTTAGAAAGAAAATGTAAGAATGGTCAAAGAAAGGAGGATTGAAGGTTCCACCATATATCAAACCCCCTACCTCCAAATTTGTTCCTTGCTTTCTTAAATGCGATTTTAATAGGATTTTCTTTCTTTCTTTTTTCATATTTGGATGCATCCTCAGAATGTGTGATGTTTTGATTTAATTTTAAATTGAAAAACTCTTAAGGAAATTGATAAAAATAACAAATTTGTTATTATTAGTTAATGAAATTTTGATGGTAGCTAAATTAGAATACAATGATCATTTTTAACCATTATTTATATGAAGAAATAAGCATTTAGATGTATAATAATGGAAACATAGACAAC

mRNA sequence

GAAGAGCTAGAAGAGAGAACAGCTTTGAGGATTCTGATTTCAATCGGATTTAGCTTCTAAAATCTCAATCTTAATCTGTTTTTTGAGGGAGCAATCATGGAAGATTCGTCCTCTCAATCCTTCTTCAGGAAGCACTGGGAAGGCTACAAGGAGTTTTGGTCCGACAGATTCTCCATTCTCGACAACTATAGCCCCTACGTTCAGCGCCAGACCCCTCTTCCTTCATGGTCTTCCTCCGATGTCGAGGAATTTATTGCTTCTGATCCCGTTCATGGCCCCGTTGTAATTCATCCTTCACTTCTTTTCCTCTTTTGCTTCTTTTACTTCTTCTATTGCCTGCTTCTGAGTTGATGTCACTCGGTGTTTCATATCATCTCGGTTGTTTTTTTTTTATCCATTCTTAGATTCGTATATCTGAAATTAAATGTGTTCAATAATAGTGGGGTTTATTTTTCCTTTGAGCTTGGGATGATCTGAAATTTCCTTGCCCAGTGAGTGTTGATACCCGATGGCCTGAGTTATAATATAGCATAACTCTTAGTAGGGAACTGGACCAAATATTTCCTTTTTGAATAATTTTTATGGTTTGTTGCTGTCAATTTTGGAAGTACATTTAAAAAAAAAAAAAGAAAAATTGGATAGAAGGAACGATTTCATTGATAAATGAAATAAAGGAATAAAAACTCGTTATTGGTGAGTTACAAGAAAGAAGATCAATTGGAGATGAAAAAAGATGAGCTATGAAGTGCAAAATAGTGCTGATTTTTACACCAAAAGAAAGCAGTAGAAAGAACCCTATCCATAAAGCGCTCAAAAGAAGAGGATACACCATTCCGTTCTCCTCATAGATGCCAGAAGAACATACGGATAAGAGGCAACCAAAGAGTCTTCCTCAAACAACAAAATGGGTTCCCGCCAAACAAAAGCAAGGTGATCATAATTCACAGACCAACCAAAAGCTTCCAAAAGTATGTACCAAAAACGAGATGCAAAAGGATAATGCATAAAAAGATGACTAAGAGATTTAGCATTTGAATTGCACATAACACACCAAGATGCTGTCAAACGCATGATAAGGGGATCTGCTTTCATTTTAGAAGTACCTAACAGTAGTCTTTTGAAACCATTTCTATCATAACAAGTGAAATAATGTTTTCCTTTCGATTTTTTTTTTATATTTGTGAGTGTCCGGGCCAGCTTACGTGCACCTTAACTAATTTCATGGATCAACCCACCTGACTCTACAACATTTGGGTGTAAGAGAAACTCATAGAAAATTAATTCTTAGGTAAGTGGCTACCATAAATTGAACCCATGACCACTTTATTAGTTTTTTTTACCATTGGCCAATCCATCATGGTTTATTTTTCTTTTGAATTGGAATGTTATATTACATTCTTACAATAAAATTAATGCATTTTATTTTAACTCTTCGTTTTCTACTTAGTGTTACTTTGCTGTTTGCACTCATAATATATTGCAATTGTCTATCCTCAGAGTTTGTTATCAGTGTGTTTAATAAAGTACCTAAGAACCATATTGGTAAATGGTATTGGTTGTTATCATGCTGATTGATAGAACCTTGTAGTGCAGCGCTAGCTTATATTTGCCTGTGATTTTCCTGCCAAGACAAGGCTTTTTGATTCTCTCTCTGGTCCTATTATGTCCTGGTTTTTGTTGCTTGTGGCTGATAAACTGATTTTTTCTCTTTTCACTGTCTTCTAACCTTCAGCTATAAAAACAATTTCCAGTTTATTTTCAGTTATGATCTAGAGTCTAGATTATTATTATACTGCCTGTAATGCTAAATAGTTAGATCATGGATTCATTATATGATCTCGTGCCTTCTTAAGTTCAACTACTTGGCCGGGGTGTTTGCTCTATTCTTTTTCTGTTTAGTGTATTCCTAAACATTCTTCAGGATGAAATTTCGAAACTACTTAAGCCGCATATCACATTAAAAACAGTCGGGTTAAGCATGGTTCTCGTTATGTTTCACATTTTTAAAACATAGCGGGAAGGCAAAGGCAGATTCCTTAACTTTCTGTTACTAAGAGTTCATGTATATGCTTCTAGATTCCTCATTCATTGGCTGCTTATTATTCCTTTTTCAGTTGAAAACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATTGGAGCTGTCTCGACTGCAGGTGTTGCATGGAAATACTCAAGAAGTTTACATGGCGCTGGGCTGTCGTTCCTTGCGGGGGGTGTATTCGGTTGGACTTTTGGCCAAGAGATCGCAAATCATTGGTATCAACTCTACAGGGTGGATACCATGGCTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAAGTTCTTAAAACTCTGATTTGCGTTGAAGCAGCAGAGCGGCAAACACTGCAGCTGCCATCTAAAATAAAAATGTAAGTGCCACCTGTTGAAATACAATGGTTGATTGGTTTGTTTTGTGATGAACTCTTCTTCCAACCTTTCAAGTTTAGAAAAGTACTCTCCTTTTTTATCTTCTGGAAATGACTCATTCATTTGCAAGCTTGTTAGAGAATGTACCCATCTTTACCAAATAAACTCAATCTTGGAGGTTAGTTAGGGTCTAAAGCATGTCCAAAATGGATACACTTGAAAGAATATTGGCTAAACTATAAAATAGGTAACCTTGAACTGTGCTTTGGTTTTAAAAAAAAACTGCAAAGTTGCAATAATATGCTTTGGGTTTTTAAAAATGTTTTAAAACTATCCTTAAGAGTAGAAGTTTGATTGAAAGAAACTGAAATTTGGAATGGTGTGGCAGTGATCTAGGATGAAAGTTGAGACTGATGCACTATTTCAGATCATTTTGTCACAGTATCATGTTTCAATTTTTGCTAAATAATATTCCAATGGATGTCCATCCCAAGGTAGGATAAGTTTTGAAATGTTTATGTAAAGACAAATGTATTGTTGTAATTTTGAAAGAAATGACAGTTTGGAGATGTTTTTATAATTTATCAAATTCCACTCTCATTCCACATGTTTTTTTCTCTTTTGAAAGTATTGTTGTTTTGCATATCCTTACTTTCAAAATGCCAAGCATGAAAATAACCCTATTAAATCTTTCCATTTAGAAAGAAAATGTAAGAATGGTCAAAGAAAGGAGGATTGAAGGTTCCACCATATATCAAACCCCCTACCTCCAAATTTGTTCCTTGCTTTCTTAAATGCGATTTTAATAGGATTTTCTTTCTTTCTTTTTTCATATTTGGATGCATCCTCAGAATGTGTGATGTTTTGATTTAATTTTAAATTGAAAAACTCTTAAGGAAATTGATAAAAATAACAAATTTGTTATTATTAGTTAATGAAATTTTGATGGTAGCTAAATTAGAATACAATGATCATTTTTAACCATTATTTATATGAAGAAATAAGCATTTAGATGTATAATAATGGAAACATAGACAAC

Coding sequence (CDS)

ATGTATATGCTTCTAGATTCCTCATTCATTGGCTGCTTATTATTCCTTTTTCAGTTGAAAACTGCCAGAGAGGCTGTAAACTTTGGTCTCACAGGAAGTGTTATTGGAGCTGTCTCGACTGCAGGTGTTGCATGGAAATACTCAAGAAGTTTACATGGCGCTGGGCTGTCGTTCCTTGCGGGGGGTGTATTCGGTTGGACTTTTGGCCAAGAGATCGCAAATCATTGGTATCAACTCTACAGGGTGGATACCATGGCTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGAAGTTCTTAA

Protein sequence

MYMLLDSSFIGCLLFLFQLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQLYRVDTMAAQVKFMEWWRNKSEGSS*
Homology
[Close]
BLAST of CsGy1G030430 vs. ExPASy Swiss-Prot
Match: Q941A6 (Succinate dehydrogenase subunit 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH6 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.0e-32
Identity = 64/82 (78.05%), Postives = 71/82 (86.59%), Query Frame = 0 

Query: 19  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ 78
           LKTAREAV FG+TG+ +GAVSTA  AWKYSRS HGA LSFL GGVFGWTFGQE+ANH  Q
Sbjct: 61  LKTAREAVTFGVTGAALGAVSTAAFAWKYSRSPHGAALSFLGGGVFGWTFGQEVANHTLQ 120

Query: 79  LYRVDTMAAQVKFMEWWRNKSE 101
           LY++DTMAAQVKFMEWW  KS+
Sbjct: 121 LYKLDTMAAQVKFMEWWERKSQ 142

[Close]
BLAST of CsGy1G030430 vs. ExPASy Swiss-Prot
Match: Q6ZCC4 (Succinate dehydrogenase subunit 6, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH6 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 9.5e-15
Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 0 

Query: 18  QLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWY 77
           QLK  RE+  F L G+++G     G+A KYS++ HG  L+   G + G   G E+A HWY
Sbjct: 55  QLKAMRESRKFALGGALVGGAHLGGIALKYSKAPHGVVLATGFGAICGAVVGSEVAEHWY 114

Query: 78  QLYRVDTMAAQVKFMEWWRNKSEGS 103
           QLY+ D   A ++F+ WW +K  G+
Sbjct: 115 QLYKTDKQGANLRFIYWWEDKVAGN 139

[Close]
BLAST of CsGy1G030430 vs. NCBI nr
Match: XP_011660175.1 (succinate dehydrogenase subunit 6, mitochondrial [Cucumis sativus] >KAE8653538.1 hypothetical protein Csa_007645 [Cucumis sativus])

HSP 1 Score: 177 bits (448), Expect = 1.07e-54
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 19  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ 78
           LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ
Sbjct: 63  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ 122

Query: 79  LYRVDTMAAQVKFMEWWRNKSEGSS 103
           LYRVDTMAAQVKFMEWWRNKSEGSS
Sbjct: 123 LYRVDTMAAQVKFMEWWRNKSEGSS 147

[Close]
BLAST of CsGy1G030430 vs. NCBI nr
Match: XP_008450314.1 (PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis melo] >KAA0055944.1 succinate dehydrogenase subunit 6 [Cucumis melo var. makuwa] >TYK28150.1 succinate dehydrogenase subunit 6 [Cucumis melo var. makuwa])

HSP 1 Score: 173 bits (438), Expect = 3.58e-53
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 0 

Query: 19  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ 78
           LKTAREAVNFGLTGSVIGAVSTAGVAWKYS+SLHGAGLSFLAGG FGWTFGQEIANHWYQ
Sbjct: 63  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHWYQ 122

Query: 79  LYRVDTMAAQVKFMEWWRNKSEGSS 103
           LYR+DTMAAQVKFMEWWRNKSEGSS
Sbjct: 123 LYRLDTMAAQVKFMEWWRNKSEGSS 147

[Close]
BLAST of CsGy1G030430 vs. NCBI nr
Match: XP_022153276.1 (succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia])

HSP 1 Score: 169 bits (428), Expect = 1.19e-51
Identity = 79/83 (95.18%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 19  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ 78
           LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFG E+ANHWYQ
Sbjct: 63  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGHEVANHWYQ 122

Query: 79  LYRVDTMAAQVKFMEWWRNKSEG 101
           LYR+DTMAAQVKFMEWWRNK+EG
Sbjct: 123 LYRLDTMAAQVKFMEWWRNKNEG 145

[Close]
BLAST of CsGy1G030430 vs. NCBI nr
Match: XP_030951398.1 (succinate dehydrogenase subunit 6, mitochondrial [Quercus lobata])

HSP 1 Score: 168 bits (426), Expect = 2.33e-51
Identity = 80/87 (91.95%), Postives = 82/87 (94.25%), Query Frame = 0 

Query: 17  FQLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHW 76
           F LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQE+ANHW
Sbjct: 60  FTLKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEVANHW 119

Query: 77  YQLYRVDTMAAQVKFMEWWRNKSEGSS 103
            QLYR+DTMAAQVKFMEWW  KSEG S
Sbjct: 120 LQLYRLDTMAAQVKFMEWWEKKSEGQS 146

[Close]
BLAST of CsGy1G030430 vs. NCBI nr
Match: XP_022927277.1 (succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata] >XP_023531100.1 succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6588233.1 Succinate dehydrogenase subunit 6, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022147.1 Succinate dehydrogenase subunit 6, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 167 bits (424), Expect = 4.85e-51
Identity = 79/83 (95.18%), Postives = 80/83 (96.39%), Query Frame = 0 

Query: 19  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ 78
           LKTAREAVNFGLTGS+IGAVSTAGVAWKYSRSLHGAGLSFLAGG FGWTFG EIANHWYQ
Sbjct: 63  LKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHWYQ 122

Query: 79  LYRVDTMAAQVKFMEWWRNKSEG 101
           LYRVDTM AQVKFMEWWRNKSEG
Sbjct: 123 LYRVDTMGAQVKFMEWWRNKSEG 145

[Close]
BLAST of CsGy1G030430 vs. ExPASy TrEMBL
Match: A0A5D3DY28 (Succinate dehydrogenase subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00640 PE=4 SV=1)

HSP 1 Score: 173 bits (438), Expect = 1.73e-53
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 0 

Query: 19  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ 78
           LKTAREAVNFGLTGSVIGAVSTAGVAWKYS+SLHGAGLSFLAGG FGWTFGQEIANHWYQ
Sbjct: 63  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHWYQ 122

Query: 79  LYRVDTMAAQVKFMEWWRNKSEGSS 103
           LYR+DTMAAQVKFMEWWRNKSEGSS
Sbjct: 123 LYRLDTMAAQVKFMEWWRNKSEGSS 147

[Close]
BLAST of CsGy1G030430 vs. ExPASy TrEMBL
Match: A0A1S3BP04 (succinate dehydrogenase subunit 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491959 PE=4 SV=1)

HSP 1 Score: 173 bits (438), Expect = 1.73e-53
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 0 

Query: 19  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ 78
           LKTAREAVNFGLTGSVIGAVSTAGVAWKYS+SLHGAGLSFLAGG FGWTFGQEIANHWYQ
Sbjct: 63  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSKSLHGAGLSFLAGGAFGWTFGQEIANHWYQ 122

Query: 79  LYRVDTMAAQVKFMEWWRNKSEGSS 103
           LYR+DTMAAQVKFMEWWRNKSEGSS
Sbjct: 123 LYRLDTMAAQVKFMEWWRNKSEGSS 147

[Close]
BLAST of CsGy1G030430 vs. ExPASy TrEMBL
Match: A0A6J1DK58 (succinate dehydrogenase subunit 6, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111020802 PE=4 SV=1)

HSP 1 Score: 169 bits (428), Expect = 5.77e-52
Identity = 79/83 (95.18%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 19  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ 78
           LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFG E+ANHWYQ
Sbjct: 63  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGHEVANHWYQ 122

Query: 79  LYRVDTMAAQVKFMEWWRNKSEG 101
           LYR+DTMAAQVKFMEWWRNK+EG
Sbjct: 123 LYRLDTMAAQVKFMEWWRNKNEG 145

[Close]
BLAST of CsGy1G030430 vs. ExPASy TrEMBL
Match: A0A6J1EGQ0 (succinate dehydrogenase subunit 6, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111434163 PE=4 SV=1)

HSP 1 Score: 167 bits (424), Expect = 2.35e-51
Identity = 79/83 (95.18%), Postives = 80/83 (96.39%), Query Frame = 0 

Query: 19  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ 78
           LKTAREAVNFGLTGS+IGAVSTAGVAWKYSRSLHGAGLSFLAGG FGWTFG EIANHWYQ
Sbjct: 63  LKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHWYQ 122

Query: 79  LYRVDTMAAQVKFMEWWRNKSEG 101
           LYRVDTM AQVKFMEWWRNKSEG
Sbjct: 123 LYRVDTMGAQVKFMEWWRNKSEG 145

[Close]
BLAST of CsGy1G030430 vs. ExPASy TrEMBL
Match: A0A6J1HQ77 (succinate dehydrogenase subunit 6, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465621 PE=4 SV=1)

HSP 1 Score: 165 bits (418), Expect = 1.75e-50
Identity = 78/82 (95.12%), Postives = 79/82 (96.34%), Query Frame = 0 

Query: 19  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ 78
           LKTAREAVNFGLTGS+IGAVSTAGVAWKYSRSLHGAGLSFLAGG FGWTFG EIANHWYQ
Sbjct: 63  LKTAREAVNFGLTGSLIGAVSTAGVAWKYSRSLHGAGLSFLAGGAFGWTFGHEIANHWYQ 122

Query: 79  LYRVDTMAAQVKFMEWWRNKSE 100
           LYRVDTM AQVKFMEWWRNKSE
Sbjct: 123 LYRVDTMGAQVKFMEWWRNKSE 144

[Close]
BLAST of CsGy1G030430 vs. TAIR 10
Match: AT1G08480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 139.0 bits (349), Expect = 2.1e-33
Identity = 64/82 (78.05%), Postives = 71/82 (86.59%), Query Frame = 0 

Query: 19  LKTAREAVNFGLTGSVIGAVSTAGVAWKYSRSLHGAGLSFLAGGVFGWTFGQEIANHWYQ 78
           LKTAREAV FG+TG+ +GAVSTA  AWKYSRS HGA LSFL GGVFGWTFGQE+ANH  Q
Sbjct: 61  LKTAREAVTFGVTGAALGAVSTAAFAWKYSRSPHGAALSFLGGGVFGWTFGQEVANHTLQ 120

Query: 79  LYRVDTMAAQVKFMEWWRNKSE 101
           LY++DTMAAQVKFMEWW  KS+
Sbjct: 121 LYKLDTMAAQVKFMEWWERKSQ 142

The following BLAST results are available for this feature:
BLAST of CsGy1G030430 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q941A63.0e-3278.05Succinate dehydrogenase subunit 6, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
Q6ZCC49.5e-1541.18Succinate dehydrogenase subunit 6, mitochondrial OS=Oryza sativa subsp. japonica... [more]
BLAST of CsGy1G030430 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011660175.11.07e-54100.00succinate dehydrogenase subunit 6, mitochondrial [Cucumis sativus] >KAE8653538.1... [more]
XP_008450314.13.58e-5396.47PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis melo] >KAA0... [more]
XP_022153276.11.19e-5195.18succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia][more]
XP_030951398.12.33e-5191.95succinate dehydrogenase subunit 6, mitochondrial [Quercus lobata][more]
XP_022927277.14.85e-5195.18succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata] >XP_0... [more]
BLAST of CsGy1G030430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DY281.73e-5396.47Succinate dehydrogenase subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3BP041.73e-5396.47succinate dehydrogenase subunit 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1DK585.77e-5295.18succinate dehydrogenase subunit 6, mitochondrial OS=Momordica charantia OX=3673 ... [more]
A0A6J1EGQ02.35e-5195.18succinate dehydrogenase subunit 6, mitochondrial-like OS=Cucurbita moschata OX=3... [more]
A0A6J1HQ771.75e-5095.12succinate dehydrogenase subunit 6, mitochondrial-like OS=Cucurbita maxima OX=366... [more]
BLAST of CsGy1G030430 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G08480.12.1e-3378.05unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034574Succinate dehydrogenase subunit 6, mitochondrialPANTHERPTHR36708SUCCINATE DEHYDROGENASE SUBUNIT 6, MITOCHONDRIALcoord: 18..101
NoneNo IPR availablePANTHERPTHR36708:SF2SUCCINATE DEHYDROGENASE SUBUNIT 6, MITOCHONDRIAL-LIKEcoord: 18..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G030430.2CsGy1G030430.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
molecular_function GO:0043495 protein-membrane adaptor activity