CsGy1G029680 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G029680
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Pentatricopeptide repeat-containing protein
Location	Gy14Chr1: 27751045 .. 27754887 (-)
RNA-Seq Expression	CsGy1G029680
Synteny	CsGy1G029680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCCTAGTTCGTCTTAAGAATGTCGCATAAGGCTTCTTGCTCCTTCTATCCTTCTCATCTCACTTTTCCATAAGGAAGAAATGGTTAAAGATATGAAGTAGACAATCGAAGTTTTCACCTAAAAAATTTAGCATCATTTTCGAAAATTTGTTCAAAAAGTTTTCTTCTCACTTTTTCCCCGGCGACGAGCAGTAGTGTCGATAACAGACTCAGACGACCAGTTTTCGCGTCTCACACGATTCATACCGACACGCTCTTCATCCACGTTCGACACCGGAGCTAGCCAACCACGTAAACACCCACTTCCAACAAGTTTTGAAGCATTTTTTTTCTTCTCCGTTTGAGACTCCAGCGTGATGCGTCACGTTTTCGATACCTGGTTTGTCTTGCAGCAACTTTTCGACTTGGACGTAAGCTTTTGATTGCTATTCCATTGGCTTCAAATCAGTTTACTTTAAGCTTCATATCTGTAAGTTCACAGTTTTTCGGTCATCAACCAGCAAGGATCCGAGCCTTTTCGGTAAGAGTCGGTAAGGATTATTGCTTTAATTTATTTTTCGAATTGGATTTGAGTATTTGAAGATTAATATGAGCTATTGGAATTCGTTTGTTGTTATGTTTGGGTATATTTCTAAGTGTCTGATTAAGATTCAACAAGGTTGAACACATTTTGGACTAATTCGGACTTGGTTAAGATGTCTTAGATCATTTTTTGAACCGTGAAAGTTTGTTGGTCGTAGTTCTGGATTAATTTGGAGTGATTAGTTAAGGTTTATGGTGGATTTTGGATAAGTATGTTACTTTTGAAAATCTCTCGGTGTTGATCAAGGTTGAGATTTATCATTTAGGCTTTCTAAAAGTTGATATTTGTTCAAGGAAGTGGTTCTTTGGATTGAGAATTATAGGATTGTTGATCGGGCTAAATAGTTTCCACATCCCTTACACAATGTAAATTTTGATAAAGATATGTTTTGGCTGTTGTGATTAGTTAAATGGGTGAATGTGGGTGTTGGATGTTTGAGAGCATGTTTTGCACCATTTGGAATTGAATGAATTTGTTTTTGGATGTTTTAAATGTTATCCTATTAGAAATTACGTTTTATGTGATTGAGAATCAACTGAAAGTATTTGTTATATTTTTAGTTGATTTGTCAAGTAAAAATATGTGATTGCTTTGAATGATAGTTGAGAGTGTTTTGACTGATTTTAAATTGAAAGTGTTCATGTTTTGGATTTGATGAGTTCAGCTGCTGAAATTGTTATTTGAAACTTTAATGAATGATTCAATTAGGGCTATCTAGATATGCCCATTTTTGTGTTTTGGGGATTCTATGGTATTTTGTTGTAGCCAAAATTGGAATTGGCGGTATACACTCATTTGTGAGAAGATACATCTTTGGAATCAAGATTTATGCTTGTGTTGTACTCACATGACCTCACACTTAAGTAATTTCTGTTGTTCTGGTCGGTTGTTAATCAGAGTTTTTGTTCTGGTCGATTGTATAATGTATTGCTTGATTGAAAGTATTGAAATGCTAGCATTTGAAAAAAAGTATGAAAGTTCTATTCAATAAAGGTTCTAAAAGTTTATTTGAACGTTTTGATATTTTTTTTTTTTTGAAAGGCTATCTGGAAGTTTCAGCTCGAAACATTTGGTGTTGAAGTTTTATTTGCTTGGAAGATCTTGAATTTTAAAGTATTGTTTCTAGCAAGTTTTAATTGAGAGTTCTACAATGTTTTGTATTTTTATTTTCAACAGTTTTGAAAGACAATGAATTTCAATGCCTGATATGGGAATTTCTTATTGAATATTTTTGTACTCATCTTTGTTTTTTCTAAAATGCTTTCAGATAAAGGATAAGGTGATAGTTTGAATGAAGTGAAGTTTTATGGTATGCAGGAGATCAATGGATGTTTACCTTAGTACTTGATAGTTTTACTCAGAACTTATTTGTAATAAGTTGCTTCCGCTGAAGTGTGTAAGTTGTAAAAGCTTCATTTGCTATGTTTTATGCATATTTTTATAATAACTGTATTGGAAAATACGGGCGGTTATAAGTCCTAACTTTTCGAAGGTTCAATGTTCAATTCATCATTTCCAAGTTCTACACGAATGGTTGAGCAATAGCATGCCATTGAAACCTCTGAAACCCTCAATTTCGATTGCTCAATTTACCCAAATCCATGCCAAACTCCTCACAAATCCAAAACCCCATATTTTCAACCCTTTGCTCGGTTCTTTGGTAAACTCCATTTTCCCTGAAAATGGCCTCTTCCTCTACAACCAAATGCTTCGCTACCCATCTTCCCACAACCACTTCACCTTCACTTATGCCCTCAAAGCCTGTTGCTTCCTTCATCAAACCCAAAAGGGCCTCGAAATCCATGCCCATCTCATCAAATCAGGTCATCTTTCTGACATCTTCATCCAAAATTCTCTGCTCCATTTCTACATTCTCGATGGCGATGTTTCTTCTGCTTCTCTAATCTTTGACTCCATCCCTGACCCAGATGTTGTTTCTTGGACTTCAATCATTTCTGGTCTTTCCAAGCTCGGTTTTGAAAAAGAAGCACTGAGTAAGTTCTTGTCCATGAATGTGAGGCCTAATTCTACTACTCTTGTCACTGCTTTATCTACTTGTTCTAGTCTTAGATGTCTCAAACTTGGGAAAGCTATACATGGGCTTAGAATGAGGACTTTGAATGAGGAAAATGTTATTTTGGAAAATGCCCTTCTTGATTTTTATGTTAGATGTGCGTATTTGAGGAGTGCAGAGAATCTGTTTGAAAAAATGCCTAAAAGAGATGTAGTGTCTTGGACGACAATGATTGGGGGCTATGCACAGAGTGGATTGTGTGAAGAGGCTGTGAGGGTATTTCAAAACATGGTTCATGTGGGAGAGGCTATACCCAATGAAGCCACTCTAGTTAATGTATTATCTGCATGTTCTTCCATATCTGCTCTGCATTTGGGTCAATGGGTGCATTCATATATCAACTCTAGGCATGATGTGATAATTGATGGAAATGTTGGAAATGCTTTGATTAACATGTATGTCAAATGTGGCAACATGGAAATGGCGATTTTGATCTTCAAAGCTACTGAGCACAAGGATATCGTATCATGGAGTACAATCATTAGTGGGTTAGCCATGAATGGCCTGGGAAAGCAAGCTTTTGTTCTCTTCTCACTCATGTTAGTCCATGGCATTTCTCCAGATGATGTAACATTTCTTGGTTTGTTATCTGCTTGCAGCCATGGTGGGTTGATCAATCAAGGCATGATGGTGTTTGAAGCCATGAAAGATGTTTATAATATTTCACCTCAAATGAGGCATTATGCTTGTATGGTGGACATGTATGGAAAGGCTGGGCTATTAGACGAAGCAGAGGCATTCATAAAGGAGATGCCTATGGAAGCTGAAGGCCCAGTTTGGGGAGCTTTGCTTCATGCTTGTCAACTTCATGGGAATGAGAAGAAGTATGAGAAAGTTAGGGAATGGTTGCTTGGAAGCAAAGGGGTTACAGTGGGAACTTTTGCTTTGTTATCAAATACTTATGCTTGTTGTGATAGATGGAATGATGCTAATGATGTTCGAGTTGCCATGAGAAGTAGAGGGTTGAAGAAAATGGCTGGACGTAGTTGGATTGAAATGGTCGATTCTTCGTATTCTTTAAGTTAAATATAAGAGAGATGGTGTAAGTTGGGGTGAAAGATTGAACCCTCTAGCTTGTAGGGACAGATGTCATGCTTATATAATTGAGATATCTCTATGCAAATAGAGATATTAAAGACCACTACACTCGTGGGCATTGTTACTCATAATTTATTATTTCCATA

mRNA sequence

AATTCCTAGTTCGTCTTAAGAATGTCGCATAAGGCTTCTTGCTCCTTCTATCCTTCTCATCTCACTTTTCCATAAGGAAGAAATGGTTAAAGATATGAAGTAGACAATCGAAGTTTTCACCTAAAAAATTTAGCATCATTTTCGAAAATTTGTTCAAAAAGTTTTCTTCTCACTTTTTCCCCGGCGACGAGCAGTAGTGTCGATAACAGACTCAGACGACCAGTTTTCGCGTCTCACACGATTCATACCGACACGCTCTTCATCCACGTTCGACACCGGAGCTAGCCAACCACGTAAACACCCACTTCCAACAAGTTTTGAAGCATTTTTTTTCTTCTCCGTTTGAGACTCCAGCGTGATGCGTCACGTTTTCGATACCTGGTTTGTCTTGCAGCAACTTTTCGACTTGGACGTAAGCTTTTGATTGCTATTCCATTGGCTTCAAATCAGTTTACTTTAAGCTTCATATCTGTAAGTTCACAGTTTTTCGGTCATCAACCAGCAAGGATCCGAGCCTTTTCGATAAAGGATAAGGTGATAGTTTGAATGAAGTGAAGTTTTATGGTATGCAGGAGATCAATGGATGTTTACCTTAGTACTTGATAGTTTTACTCAGAACTTATTTGTAATAAGTTGCTTCCGCTGAAGTGTGTAAGTTGTAAAAGCTTCATTTGCTATGTTTTATGCATATTTTTATAATAACTGTATTGGAAAATACGGGCGGTTATAAGTCCTAACTTTTCGAAGGTTCAATGTTCAATTCATCATTTCCAAGTTCTACACGAATGGTTGAGCAATAGCATGCCATTGAAACCTCTGAAACCCTCAATTTCGATTGCTCAATTTACCCAAATCCATGCCAAACTCCTCACAAATCCAAAACCCCATATTTTCAACCCTTTGCTCGGTTCTTTGGTAAACTCCATTTTCCCTGAAAATGGCCTCTTCCTCTACAACCAAATGCTTCGCTACCCATCTTCCCACAACCACTTCACCTTCACTTATGCCCTCAAAGCCTGTTGCTTCCTTCATCAAACCCAAAAGGGCCTCGAAATCCATGCCCATCTCATCAAATCAGGTCATCTTTCTGACATCTTCATCCAAAATTCTCTGCTCCATTTCTACATTCTCGATGGCGATGTTTCTTCTGCTTCTCTAATCTTTGACTCCATCCCTGACCCAGATGTTGTTTCTTGGACTTCAATCATTTCTGGTCTTTCCAAGCTCGGTTTTGAAAAAGAAGCACTGAGTAAGTTCTTGTCCATGAATGTGAGGCCTAATTCTACTACTCTTGTCACTGCTTTATCTACTTGTTCTAGTCTTAGATGTCTCAAACTTGGGAAAGCTATACATGGGCTTAGAATGAGGACTTTGAATGAGGAAAATGTTATTTTGGAAAATGCCCTTCTTGATTTTTATGTTAGATGTGCGTATTTGAGGAGTGCAGAGAATCTGTTTGAAAAAATGCCTAAAAGAGATGTAGTGTCTTGGACGACAATGATTGGGGGCTATGCACAGAGTGGATTGTGTGAAGAGGCTGTGAGGGTATTTCAAAACATGGTTCATGTGGGAGAGGCTATACCCAATGAAGCCACTCTAGTTAATGTATTATCTGCATGTTCTTCCATATCTGCTCTGCATTTGGGTCAATGGGTGCATTCATATATCAACTCTAGGCATGATGTGATAATTGATGGAAATGTTGGAAATGCTTTGATTAACATGTATGTCAAATGTGGCAACATGGAAATGGCGATTTTGATCTTCAAAGCTACTGAGCACAAGGATATCGTATCATGGAGTACAATCATTAGTGGGTTAGCCATGAATGGCCTGGGAAAGCAAGCTTTTGTTCTCTTCTCACTCATGTTAGTCCATGGCATTTCTCCAGATGATGTAACATTTCTTGGTTTGTTATCTGCTTGCAGCCATGGTGGGTTGATCAATCAAGGCATGATGGTGTTTGAAGCCATGAAAGATGTTTATAATATTTCACCTCAAATGAGGCATTATGCTTGTATGGTGGACATGTATGGAAAGGCTGGGCTATTAGACGAAGCAGAGGCATTCATAAAGGAGATGCCTATGGAAGCTGAAGGCCCAGTTTGGGGAGCTTTGCTTCATGCTTGTCAACTTCATGGGAATGAGAAGAAGTATGAGAAAGTTAGGGAATGGTTGCTTGGAAGCAAAGGGGTTACAGTGGGAACTTTTGCTTTGTTATCAAATACTTATGCTTGTTGTGATAGATGGAATGATGCTAATGATGTTCGAGTTGCCATGAGAAGTAGAGGGTTGAAGAAAATGGCTGGACGTAGTTGGATTGAAATGGTCGATTCTTCGTATTCTTTAAGTTAAATATAAGAGAGATGGTGTAAGTTGGGGTGAAAGATTGAACCCTCTAGCTTGTAGGGACAGATGTCATGCTTATATAATTGAGATATCTCTATGCAAATAGAGATATTAAAGACCACTACACTCGTGGGCATTGTTACTCATAATTTATTATTTCCATA

Coding sequence (CDS)

ATGCCATTGAAACCTCTGAAACCCTCAATTTCGATTGCTCAATTTACCCAAATCCATGCCAAACTCCTCACAAATCCAAAACCCCATATTTTCAACCCTTTGCTCGGTTCTTTGGTAAACTCCATTTTCCCTGAAAATGGCCTCTTCCTCTACAACCAAATGCTTCGCTACCCATCTTCCCACAACCACTTCACCTTCACTTATGCCCTCAAAGCCTGTTGCTTCCTTCATCAAACCCAAAAGGGCCTCGAAATCCATGCCCATCTCATCAAATCAGGTCATCTTTCTGACATCTTCATCCAAAATTCTCTGCTCCATTTCTACATTCTCGATGGCGATGTTTCTTCTGCTTCTCTAATCTTTGACTCCATCCCTGACCCAGATGTTGTTTCTTGGACTTCAATCATTTCTGGTCTTTCCAAGCTCGGTTTTGAAAAAGAAGCACTGAGTAAGTTCTTGTCCATGAATGTGAGGCCTAATTCTACTACTCTTGTCACTGCTTTATCTACTTGTTCTAGTCTTAGATGTCTCAAACTTGGGAAAGCTATACATGGGCTTAGAATGAGGACTTTGAATGAGGAAAATGTTATTTTGGAAAATGCCCTTCTTGATTTTTATGTTAGATGTGCGTATTTGAGGAGTGCAGAGAATCTGTTTGAAAAAATGCCTAAAAGAGATGTAGTGTCTTGGACGACAATGATTGGGGGCTATGCACAGAGTGGATTGTGTGAAGAGGCTGTGAGGGTATTTCAAAACATGGTTCATGTGGGAGAGGCTATACCCAATGAAGCCACTCTAGTTAATGTATTATCTGCATGTTCTTCCATATCTGCTCTGCATTTGGGTCAATGGGTGCATTCATATATCAACTCTAGGCATGATGTGATAATTGATGGAAATGTTGGAAATGCTTTGATTAACATGTATGTCAAATGTGGCAACATGGAAATGGCGATTTTGATCTTCAAAGCTACTGAGCACAAGGATATCGTATCATGGAGTACAATCATTAGTGGGTTAGCCATGAATGGCCTGGGAAAGCAAGCTTTTGTTCTCTTCTCACTCATGTTAGTCCATGGCATTTCTCCAGATGATGTAACATTTCTTGGTTTGTTATCTGCTTGCAGCCATGGTGGGTTGATCAATCAAGGCATGATGGTGTTTGAAGCCATGAAAGATGTTTATAATATTTCACCTCAAATGAGGCATTATGCTTGTATGGTGGACATGTATGGAAAGGCTGGGCTATTAGACGAAGCAGAGGCATTCATAAAGGAGATGCCTATGGAAGCTGAAGGCCCAGTTTGGGGAGCTTTGCTTCATGCTTGTCAACTTCATGGGAATGAGAAGAAGTATGAGAAAGTTAGGGAATGGTTGCTTGGAAGCAAAGGGGTTACAGTGGGAACTTTTGCTTTGTTATCAAATACTTATGCTTGTTGTGATAGATGGAATGATGCTAATGATGTTCGAGTTGCCATGAGAAGTAGAGGGTTGAAGAAAATGGCTGGACGTAGTTGGATTGAAATGGTCGATTCTTCGTATTCTTTAAGTTAA

Protein sequence

MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLIFDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSTCSSLRCLKLGKAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHGISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACCDRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSSYSLS*

Homology

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BLAST of CsGy1G029680 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 4.1e-98
Identity = 193/524 (36.83%), Postives = 296/524 (56.49%), Query Frame = 0


Query: 21  KLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSSHNHFTFTYALKACCFLHQTQ 80
           K +  P   I+N +      S  P + L LY  M+      N +TF + LK+C      +
Sbjct: 92  KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFK 151

Query: 81  KGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGD--------------------------- 140
           +G +IH H++K G   D+++  SL+  Y+ +G                            
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211

Query: 141 ----VSSASLIFDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSM---NVRPNSTTLVT 200
               + +A  +FD IP  DVVSW ++ISG ++ G  KEAL  F  M   NVRP+ +T+VT
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 271

Query: 201 ALSTCSSLRCLKLGKAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRD 260
            +S C+    ++LG+ +H          N+ + NAL+D Y +C  L +A  LFE++P +D
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 331

Query: 261 VVSWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVH 320
           V+SW T+IGGY    L +EA+ +FQ M+  GE  PN+ T++++L AC+ + A+ +G+W+H
Sbjct: 332 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIH 391

Query: 321 SYINSR-HDVIIDGNVGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGL 380
            YI+ R   V    ++  +LI+MY KCG++E A  +F +  HK + SW+ +I G AM+G 
Sbjct: 392 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 451

Query: 381 GKQAFVLFSLMLVHGISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYA 440
              +F LFS M   GI PDD+TF+GLLSACSH G+++ G  +F  M   Y ++P++ HY 
Sbjct: 452 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 511

Query: 441 CMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGV 500
           CM+D+ G +GL  EAE  I  M ME +G +W +LL AC++HGN +  E   E L+  +  
Sbjct: 512 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 571

Query: 501 TVGTFALLSNTYACCDRWNDANDVRVAMRSRGLKKMAGRSWIEM 510
             G++ LLSN YA   RWN+    R  +  +G+KK+ G S IE+
Sbjct: 572 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 614

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BLAST of CsGy1G029680 vs. ExPASy Swiss-Prot
Match: Q9SZK1 (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E45 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.5e-89
Identity = 180/480 (37.50%), Postives = 274/480 (57.08%), Query Frame = 0


Query: 31  FNPLLGSLVNSIFPENGLFLYNQMLRYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLI 90
           +N LL S      P   +F Y   +    S + FTF    KAC      ++G +IH  + 
Sbjct: 74  YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133

Query: 91  KSGHLSDIFIQNSLLHFYILDGDVSSASLIFDSIPDPDVVSWTSIISGLSKLGFEKEALS 150
           K G   DI++QNSL+HFY + G+  +A  +F  +P  DVVSWT II+G ++ G  KEAL 
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193

Query: 151 KFLSMNVRPNSTTLVTALSTCSSLRCLKLGKAIHGLRMRTLNEENVILENALLDFYVRCA 210
            F  M+V PN  T V  L +   + CL LGK IHGL ++  +  ++   NAL+D YV+C 
Sbjct: 194 TFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE 253

Query: 211 YLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVL 270
            L  A  +F ++ K+D VSW +MI G       +EA+ +F  M       P+   L +VL
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVL 313

Query: 271 SACSSISALHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCGNMEMAILIFKATEHKDI 330
           SAC+S+ A+  G+WVH YI +   +  D ++G A+++MY KCG +E A+ IF     K++
Sbjct: 314 SACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV 373

Query: 331 VSWSTIISGLAMNGLGKQAFVLFSLMLVHGISPDDVTFLGLLSACSHGGLINQGMMVFEA 390
            +W+ ++ GLA++G G ++   F  M+  G  P+ VTFL  L+AC H GL+++G   F  
Sbjct: 374 FTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHK 433

Query: 391 MKD-VYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNE 450
           MK   YN+ P++ HY CM+D+  +AGLLDEA   +K MP++ +  + GA+L AC+  G  
Sbjct: 434 MKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTL 493

Query: 451 KKYEK-VREWLLGSKGVTVGTFALLSNTYACCDRWNDANDVRVAMRSRGLKKMAGRSWIE 509
            +  K + +  L  +    G + LLSN +A   RW+D   +R  M+ +G+ K+ G S+IE
Sbjct: 494 MELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552

[Close]

BLAST of CsGy1G029680 vs. ExPASy Swiss-Prot
Match: Q9MA95 (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E82 PE=3 SV=2)

HSP 1 Score: 330.5 bits (846), Expect = 3.4e-89
Identity = 179/496 (36.09%), Postives = 285/496 (57.46%), Query Frame = 0


Query: 26  PKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSSHNHFTFTYALKACCFLHQTQKGLEI 85
           P  +I+N ++    NS  P+  L  Y +MLR   S ++FTF Y LKAC  L   Q G  +
Sbjct: 70  PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129

Query: 86  HAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLIFDSIPDPDVVSWTSIISGL---SKL 145
           H  ++K+G   ++++   LLH Y+  G+V+    +F+ IP  +VV+W S+ISG    ++ 
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189

Query: 146 GFEKEALSKFLSMNVRPNSTTLVTALSTCSSLRCLKLGKAIHGLRMRTLNEE-------- 205
               EA  +  S  V+ N T +V  L  C   + +  GK  HG  ++ L  +        
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGF-LQGLGFDPYFQSKVG 249

Query: 206 -NVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVRVFQNM 265
            NVIL  +L+D Y +C  LR+A  LF+ MP+R +VSW ++I GY+Q+G  EEA+ +F +M
Sbjct: 250 FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 309

Query: 266 VHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCG 325
           + +G A P++ T ++V+ A        LGQ +H+Y+ S+   + D  +  AL+NMY K G
Sbjct: 310 LDLGIA-PDKVTFLSVIRASMIQGCSQLGQSIHAYV-SKTGFVKDAAIVCALVNMYAKTG 369

Query: 326 NMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG-ISPDDVTFLGLL 385
           + E A   F+  E KD ++W+ +I GLA +G G +A  +F  M   G  +PD +T+LG+L
Sbjct: 370 DAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVL 429

Query: 386 SACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAE 445
            ACSH GL+ +G   F  M+D++ + P + HY CMVD+  +AG  +EAE  +K MP++  
Sbjct: 430 YACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPN 489

Query: 446 GPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACCDRWNDANDVRVA 505
             +WGALL+ C +H N +  +++R  +   + +  G + LLSN YA   RW D   +R +
Sbjct: 490 VNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRES 549

Query: 506 MRSRGLKKMAGRSWIE 509
           M+S+ + K+ G S +E
Sbjct: 550 MKSKRVDKVLGHSSVE 562

[Close]

BLAST of CsGy1G029680 vs. ExPASy Swiss-Prot
Match: Q9SX45 (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 3.4e-89
Identity = 175/463 (37.80%), Postives = 277/463 (59.83%), Query Frame = 0


Query: 51  YNQMLRYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYIL 110
           Y  M R     +  TF   LKA  F  +     + HAH++K G  SD F++NSL+  Y  
Sbjct: 92  YRHMRRNGVIPSRHTFPPLLKA-VFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSS 151

Query: 111 DGDVSSASLIFDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSM---NVRPNSTTLVTA 170
            G    AS +FD   D DVV+WT++I G  + G   EA+  F+ M    V  N  T+V+ 
Sbjct: 152 SGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 211

Query: 171 LSTCSSLRCLKLGKAIHGLRMRTLNEE-NVILENALLDFYVRCAYLRSAENLFEKMPKRD 230
           L     +  ++ G+++HGL + T   + +V + ++L+D Y +C+    A+ +F++MP R+
Sbjct: 212 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN 271

Query: 231 VVSWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVH 290
           VV+WT +I GY QS   ++ + VF+ M+   +  PNE TL +VLSAC+ + ALH G+ VH
Sbjct: 272 VVTWTALIAGYVQSRCFDKGMLVFEEMLK-SDVAPNEKTLSSVLSACAHVGALHRGRRVH 331

Query: 291 SYINSRHDVIIDGNVGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLG 350
            Y+  ++ + I+   G  LI++YVKCG +E AIL+F+    K++ +W+ +I+G A +G  
Sbjct: 332 CYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYA 391

Query: 351 KQAFVLFSLMLVHGISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYAC 410
           + AF LF  ML   +SP++VTF+ +LSAC+HGGL+ +G  +F +MK  +N+ P+  HYAC
Sbjct: 392 RDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYAC 451

Query: 411 MVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVT 470
           MVD++G+ GLL+EA+A I+ MPME    VWGAL  +C LH + +  +     ++  +   
Sbjct: 452 MVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSH 511

Query: 471 VGTFALLSNTYACCDRWNDANDVRVAMRSRGLKKMAGRSWIEM 510
            G + LL+N Y+    W++   VR  M+ + + K  G SWIE+
Sbjct: 512 SGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEV 551

[Close]

BLAST of CsGy1G029680 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.0e-88
Identity = 183/531 (34.46%), Postives = 289/531 (54.43%), Query Frame = 0


Query: 21  KLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRY---PSSHNHFTFTYALKACCFLH 80
           K + NP    +N  +     S  P+    LY QMLR+    S  +HFT+    K C  L 
Sbjct: 111 KGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLR 170

Query: 81  QTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLIFDSIPDPDVVSWTSIIS 140
            +  G  I  H++K        + N+ +H +   GD+ +A  +FD  P  D+VSW  +I+
Sbjct: 171 LSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLIN 230

Query: 141 GLSKLGFEKEALSKFLSM---NVRPNSTTLVTALSTCSSLRCLKLGKAIH------GLRM 200
           G  K+G  ++A+  +  M    V+P+  T++  +S+CS L  L  GK  +      GLRM
Sbjct: 231 GYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRM 290

Query: 201 RTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVR 260
                  + L NAL+D + +C  +  A  +F+ + KR +VSWTTMI GYA+ GL + + +
Sbjct: 291 ------TIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRK 350

Query: 261 VFQNM------------------------------VHVGEAIPNEATLVNVLSACSSISA 320
           +F +M                              +      P+E T+++ LSACS + A
Sbjct: 351 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGA 410

Query: 321 LHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIIS 380
           L +G W+H YI  ++ + ++  +G +L++MY KCGN+  A+ +F   + ++ ++++ II 
Sbjct: 411 LDVGIWIHRYI-EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIG 470

Query: 381 GLAMNGLGKQAFVLFSLMLVHGISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNIS 440
           GLA++G    A   F+ M+  GI+PD++TF+GLLSAC HGG+I  G   F  MK  +N++
Sbjct: 471 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLN 530

Query: 441 PQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREW 500
           PQ++HY+ MVD+ G+AGLL+EA+  ++ MPMEA+  VWGALL  C++HGN +  EK  + 
Sbjct: 531 PQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKK 590

Query: 501 LLGSKGVTVGTFALLSNTYACCDRWNDANDVRVAMRSRGLKKMAGRSWIEM 510
           LL       G + LL   Y   + W DA   R  M  RG++K+ G S IE+
Sbjct: 591 LLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634

[Close]

BLAST of CsGy1G029680 vs. NCBI nr
Match: XP_011660133.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >XP_031745752.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >XP_031745757.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >XP_031745768.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >KGN66483.1 hypothetical protein Csa_006958 [Cucumis sativus])

HSP 1 Score: 1031 bits (2666), Expect = 0.0
Identity = 510/516 (98.84%), Postives = 513/516 (99.42%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
           MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS
Sbjct: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60

Query: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
           HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI
Sbjct: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSTCSSLRCLKLG 180
           FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALS CSSLRCLKLG
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180

Query: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
           KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS
Sbjct: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240

Query: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
           GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNMEMAILIFKA EHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360

Query: 361 ISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           +SPDD+TFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA
Sbjct: 361 VSPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480
           EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480

Query: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSSYSL 516
           DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDS+Y L
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSTYPL 516

[Close]

BLAST of CsGy1G029680 vs. NCBI nr
Match: TYK18848.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 988 bits (2555), Expect = 0.0
Identity = 491/517 (94.97%), Postives = 502/517 (97.10%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
           MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSI PENGLFLYNQML YPSS
Sbjct: 106 MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSS 165

Query: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
           HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYIL+GDVSSASLI
Sbjct: 166 HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGDVSSASLI 225

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSTCSSLRCLKLG 180
           FDSIP+PDVVSWTSIISGLSKLGFEKEAL KFLSMNVRPNSTTLVTALS CSSLRCLKLG
Sbjct: 226 FDSIPNPDVVSWTSIISGLSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRCLKLG 285

Query: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
           KAIHGLR+RTLNEENV LENALLDFYVRCAYLRSAENLFEKM KRDVVSWTTMIGGYAQS
Sbjct: 286 KAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYAQS 345

Query: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
           GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN
Sbjct: 346 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 405

Query: 301 VGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNMEMAILIF A EHKDI+SWST+ISGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 406 VGNALINMYVKCGNMEMAILIFNAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLVHG 465

Query: 361 ISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           ISPDD+TFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQ+RHYACMVDMYGKAGLLDEA
Sbjct: 466 ISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEA 525

Query: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480
           EAFIKEMPMEAEGPVWGALLHACQ+HGNEKKYEKVRE LLGSKGVTVG FALLSNTYA C
Sbjct: 526 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASC 585

Query: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSSYSLS 517
           DRWNDANDVRVAMRSRGLKKMAG SWIE+V+ S  +S
Sbjct: 586 DRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPVS 622

[Close]

BLAST of CsGy1G029680 vs. NCBI nr
Match: XP_008450427.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo] >XP_016900885.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo] >XP_016900886.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 979 bits (2532), Expect = 0.0
Identity = 487/513 (94.93%), Postives = 496/513 (96.69%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
           MPLKPLKPSIS AQFTQIHAKLLTNPKPHIFNPLLGSLVNSI PENGLFLYNQML YPSS
Sbjct: 1   MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSS 60

Query: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
           HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYIL GDVSSASLI
Sbjct: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILHGDVSSASLI 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSTCSSLRCLKLG 180
           FDSIP+PDVVSWTSIISG SKLGFEKEAL KFLSMNVRPNSTTLVTALS CSSLR LKLG
Sbjct: 121 FDSIPNPDVVSWTSIISGFSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRRLKLG 180

Query: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
           KAIHGLR+RTLNEENV LENALLDFYVRCAYLRSAENLFEKM KRDVVSWTTMIGGYAQS
Sbjct: 181 KAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYAQS 240

Query: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
           GLCEEAVRVFQNMVH GEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN
Sbjct: 241 GLCEEAVRVFQNMVHAGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNMEMAILIFKA EHKDI+SWST+ISGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLVHG 360

Query: 361 ISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           ISPDD+TFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQ+RHYACMVDMYGKAGLLDEA
Sbjct: 361 ISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480
           EAFIKEMPMEAEGPVWGALLHACQ+HGNEKKYEKVRE LLGSKGVTVG FALLSNTYA C
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASC 480

Query: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSS 513
           DRWNDANDVRVAMRSRGLKKMAG SWIE+V+ S
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGCSWIELVNPS 513

[Close]

BLAST of CsGy1G029680 vs. NCBI nr
Match: XP_038878297.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 953 bits (2463), Expect = 0.0
Identity = 469/516 (90.89%), Postives = 488/516 (94.57%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
           M LKP KPSI IAQ  QIH  LL NPKPHI NPLLGSLVNS+ PENGLFLYNQMLRYPSS
Sbjct: 1   MLLKPPKPSILIAQLAQIHTNLLINPKPHILNPLLGSLVNSVSPENGLFLYNQMLRYPSS 60

Query: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
           HNHFTFTYALKACCFLH+TQKGLEIHAHLIKSGHLSDIF+QNSLLHFYILDGDV SAS I
Sbjct: 61  HNHFTFTYALKACCFLHETQKGLEIHAHLIKSGHLSDIFLQNSLLHFYILDGDVPSASRI 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSTCSSLRCLKLG 180
           FDSIPDPDV+SWTSIISGLSKLGFEKEAL KFLSMNVRPNSTTLVTALS CSSLRCLKLG
Sbjct: 121 FDSIPDPDVISWTSIISGLSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180

Query: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
           KAIHGLR+R+LNEENV L+NALLDFYVRC YLRSAE LF++MPKRDVVSWTTMIGGYAQ 
Sbjct: 181 KAIHGLRLRSLNEENVSLDNALLDFYVRCGYLRSAEYLFDEMPKRDVVSWTTMIGGYAQR 240

Query: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
           GLCEEAVRVFQNMVHVGEAIPNEATL+NVLSACSSISALHLGQWVHSYINSRHDVIIDGN
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLINVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNMEMAILIFKA EHKDI+SWSTIISGLAMNGLG QAF LFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTIISGLAMNGLGNQAFGLFSLMLVHG 360

Query: 361 ISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           ISPDD+TFL LLSACSHGGLINQG+MVFEAMKDVYNISPQMRHYACMVD+YGKAGLLDEA
Sbjct: 361 ISPDDITFLSLLSACSHGGLINQGLMVFEAMKDVYNISPQMRHYACMVDLYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480
           EAFIKEMPMEAEG VWGALLHACQ+HGNEKKYEKV+EWLLGSKGVTVGTFALLSNTYA C
Sbjct: 421 EAFIKEMPMEAEGSVWGALLHACQIHGNEKKYEKVKEWLLGSKGVTVGTFALLSNTYASC 480

Query: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSSYSL 516
           DRWNDAN+VR  MRS+GLKKMAG SWIE+VDSS SL
Sbjct: 481 DRWNDANEVRDTMRSKGLKKMAGCSWIELVDSSNSL 516

[Close]

BLAST of CsGy1G029680 vs. NCBI nr
Match: XP_011660134.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 945 bits (2442), Expect = 0.0
Identity = 475/516 (92.05%), Postives = 478/516 (92.64%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
           MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS
Sbjct: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60

Query: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
           HNHFTFTYALKACCFLHQTQKGLEIHAHLIKS                            
Sbjct: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKS---------------------------- 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSTCSSLRCLKLG 180
                  DVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALS CSSLRCLKLG
Sbjct: 121 -------DVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180

Query: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
           KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS
Sbjct: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240

Query: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
           GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNMEMAILIFKA EHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360

Query: 361 ISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           +SPDD+TFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA
Sbjct: 361 VSPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480
           EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480

Query: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSSYSL 516
           DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDS+Y L
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSTYPL 481

[Close]

BLAST of CsGy1G029680 vs. ExPASy TrEMBL
Match: A0A0A0LXJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613550 PE=4 SV=1)

HSP 1 Score: 1031 bits (2666), Expect = 0.0
Identity = 510/516 (98.84%), Postives = 513/516 (99.42%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
           MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS
Sbjct: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60

Query: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
           HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI
Sbjct: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSTCSSLRCLKLG 180
           FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALS CSSLRCLKLG
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180

Query: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
           KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS
Sbjct: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240

Query: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
           GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNMEMAILIFKA EHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360

Query: 361 ISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           +SPDD+TFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA
Sbjct: 361 VSPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480
           EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480

Query: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSSYSL 516
           DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDS+Y L
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSTYPL 516

[Close]

BLAST of CsGy1G029680 vs. ExPASy TrEMBL
Match: A0A5D3D5L6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00410 PE=4 SV=1)

HSP 1 Score: 988 bits (2555), Expect = 0.0
Identity = 491/517 (94.97%), Postives = 502/517 (97.10%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
           MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSI PENGLFLYNQML YPSS
Sbjct: 106 MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSS 165

Query: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
           HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYIL+GDVSSASLI
Sbjct: 166 HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGDVSSASLI 225

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSTCSSLRCLKLG 180
           FDSIP+PDVVSWTSIISGLSKLGFEKEAL KFLSMNVRPNSTTLVTALS CSSLRCLKLG
Sbjct: 226 FDSIPNPDVVSWTSIISGLSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRCLKLG 285

Query: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
           KAIHGLR+RTLNEENV LENALLDFYVRCAYLRSAENLFEKM KRDVVSWTTMIGGYAQS
Sbjct: 286 KAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYAQS 345

Query: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
           GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN
Sbjct: 346 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 405

Query: 301 VGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNMEMAILIF A EHKDI+SWST+ISGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 406 VGNALINMYVKCGNMEMAILIFNAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLVHG 465

Query: 361 ISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           ISPDD+TFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQ+RHYACMVDMYGKAGLLDEA
Sbjct: 466 ISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEA 525

Query: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480
           EAFIKEMPMEAEGPVWGALLHACQ+HGNEKKYEKVRE LLGSKGVTVG FALLSNTYA C
Sbjct: 526 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASC 585

Query: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSSYSLS 517
           DRWNDANDVRVAMRSRGLKKMAG SWIE+V+ S  +S
Sbjct: 586 DRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPVS 622

[Close]

BLAST of CsGy1G029680 vs. ExPASy TrEMBL
Match: A0A1S4DY27 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492035 PE=4 SV=1)

HSP 1 Score: 979 bits (2532), Expect = 0.0
Identity = 487/513 (94.93%), Postives = 496/513 (96.69%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
           MPLKPLKPSIS AQFTQIHAKLLTNPKPHIFNPLLGSLVNSI PENGLFLYNQML YPSS
Sbjct: 1   MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSS 60

Query: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
           HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYIL GDVSSASLI
Sbjct: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILHGDVSSASLI 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSTCSSLRCLKLG 180
           FDSIP+PDVVSWTSIISG SKLGFEKEAL KFLSMNVRPNSTTLVTALS CSSLR LKLG
Sbjct: 121 FDSIPNPDVVSWTSIISGFSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRRLKLG 180

Query: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
           KAIHGLR+RTLNEENV LENALLDFYVRCAYLRSAENLFEKM KRDVVSWTTMIGGYAQS
Sbjct: 181 KAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYAQS 240

Query: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
           GLCEEAVRVFQNMVH GEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN
Sbjct: 241 GLCEEAVRVFQNMVHAGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNMEMAILIFKA EHKDI+SWST+ISGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLVHG 360

Query: 361 ISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           ISPDD+TFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQ+RHYACMVDMYGKAGLLDEA
Sbjct: 361 ISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480
           EAFIKEMPMEAEGPVWGALLHACQ+HGNEKKYEKVRE LLGSKGVTVG FALLSNTYA C
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASC 480

Query: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSS 513
           DRWNDANDVRVAMRSRGLKKMAG SWIE+V+ S
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGCSWIELVNPS 513

[Close]

BLAST of CsGy1G029680 vs. ExPASy TrEMBL
Match: A0A1S4DY30 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492035 PE=4 SV=1)

HSP 1 Score: 898 bits (2320), Expect = 0.0
Identity = 454/513 (88.50%), Postives = 462/513 (90.06%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60
           MPLKPLKPSIS AQFTQIHAKLLTNPKPHIFNPLLGSLVNSI PENGLFLYNQML YPSS
Sbjct: 1   MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSS 60

Query: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120
           HNHFTFTYALKACCFLHQTQKGLEIHAHLIKS                            
Sbjct: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKS---------------------------- 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSTCSSLRCLKLG 180
                  DVVSWTSIISG SKLGFEKEAL KFLSMNVRPNSTTLVTALS CSSLR LKLG
Sbjct: 121 -------DVVSWTSIISGFSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRRLKLG 180

Query: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240
           KAIHGLR+RTLNEENV LENALLDFYVRCAYLRSAENLFEKM KRDVVSWTTMIGGYAQS
Sbjct: 181 KAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYAQS 240

Query: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300
           GLCEEAVRVFQNMVH GEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN
Sbjct: 241 GLCEEAVRVFQNMVHAGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNMEMAILIFKA EHKDI+SWST+ISGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLVHG 360

Query: 361 ISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           ISPDD+TFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQ+RHYACMVDMYGKAGLLDEA
Sbjct: 361 ISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480
           EAFIKEMPMEAEGPVWGALLHACQ+HGNEKKYEKVRE LLGSKGVTVG FALLSNTYA C
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASC 478

Query: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSS 513
           DRWNDANDVRVAMRSRGLKKMAG SWIE+V+ S
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGCSWIELVNPS 478

[Close]

BLAST of CsGy1G029680 vs. ExPASy TrEMBL
Match: A0A5A7UY28 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold601G00080 PE=4 SV=1)

HSP 1 Score: 878 bits (2269), Expect = 0.0
Identity = 436/460 (94.78%), Postives = 445/460 (96.74%), Query Frame = 0


Query: 54  MLRYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGD 113
           ML YPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYIL GD
Sbjct: 1   MLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILHGD 60

Query: 114 VSSASLIFDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSTCSS 173
           VSSASLIFDSIP+PDVVSWTSIISG SKLGFEKEAL KFLSMNVRPNSTTLVTALS CSS
Sbjct: 61  VSSASLIFDSIPNPDVVSWTSIISGFSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSS 120

Query: 174 LRCLKLGKAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTM 233
           LR LKLGKAIHGLR+RTLNEENV LENALLDFYVRCAYLRSAENLFEKM KRDVVSWTTM
Sbjct: 121 LRRLKLGKAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTM 180

Query: 234 IGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRH 293
           IGGYAQSGLCEEAVRVFQNMVH GEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRH
Sbjct: 181 IGGYAQSGLCEEAVRVFQNMVHAGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRH 240

Query: 294 DVIIDGNVGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLF 353
           DVIIDGNVGNALINMYVKCGNMEMAILIFKA EHKDI+SWST+ISGLAMNGLGKQAFVLF
Sbjct: 241 DVIIDGNVGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTVISGLAMNGLGKQAFVLF 300

Query: 354 SLMLVHGISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGK 413
           SLMLVHGISPDD+TFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQ+RHYACMVDMYGK
Sbjct: 301 SLMLVHGISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGK 360

Query: 414 AGLLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALL 473
           AGLLDEAEAFIKEMPMEAEGPVWGALLHACQ+HGNEKKYEKVRE LLGSKGVTVG FALL
Sbjct: 361 AGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALL 420

Query: 474 SNTYACCDRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSS 513
           SNTYA CDRWNDANDVRVAMRSRGLKKMAG SWIE+V+ S
Sbjct: 421 SNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPS 460

[Close]

BLAST of CsGy1G029680 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 360.1 bits (923), Expect = 2.9e-99
Identity = 193/524 (36.83%), Postives = 296/524 (56.49%), Query Frame = 0


Query: 21  KLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSSHNHFTFTYALKACCFLHQTQ 80
           K +  P   I+N +      S  P + L LY  M+      N +TF + LK+C      +
Sbjct: 92  KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFK 151

Query: 81  KGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGD--------------------------- 140
           +G +IH H++K G   D+++  SL+  Y+ +G                            
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211

Query: 141 ----VSSASLIFDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSM---NVRPNSTTLVT 200
               + +A  +FD IP  DVVSW ++ISG ++ G  KEAL  F  M   NVRP+ +T+VT
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 271

Query: 201 ALSTCSSLRCLKLGKAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRD 260
            +S C+    ++LG+ +H          N+ + NAL+D Y +C  L +A  LFE++P +D
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 331

Query: 261 VVSWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVH 320
           V+SW T+IGGY    L +EA+ +FQ M+  GE  PN+ T++++L AC+ + A+ +G+W+H
Sbjct: 332 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIH 391

Query: 321 SYINSR-HDVIIDGNVGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGL 380
            YI+ R   V    ++  +LI+MY KCG++E A  +F +  HK + SW+ +I G AM+G 
Sbjct: 392 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 451

Query: 381 GKQAFVLFSLMLVHGISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYA 440
              +F LFS M   GI PDD+TF+GLLSACSH G+++ G  +F  M   Y ++P++ HY 
Sbjct: 452 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 511

Query: 441 CMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGV 500
           CM+D+ G +GL  EAE  I  M ME +G +W +LL AC++HGN +  E   E L+  +  
Sbjct: 512 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 571

Query: 501 TVGTFALLSNTYACCDRWNDANDVRVAMRSRGLKKMAGRSWIEM 510
             G++ LLSN YA   RWN+    R  +  +G+KK+ G S IE+
Sbjct: 572 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 614

[Close]

BLAST of CsGy1G029680 vs. TAIR 10
Match: AT4G38010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 331.6 bits (849), Expect = 1.1e-90
Identity = 180/480 (37.50%), Postives = 274/480 (57.08%), Query Frame = 0


Query: 31  FNPLLGSLVNSIFPENGLFLYNQMLRYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLI 90
           +N LL S      P   +F Y   +    S + FTF    KAC      ++G +IH  + 
Sbjct: 74  YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133

Query: 91  KSGHLSDIFIQNSLLHFYILDGDVSSASLIFDSIPDPDVVSWTSIISGLSKLGFEKEALS 150
           K G   DI++QNSL+HFY + G+  +A  +F  +P  DVVSWT II+G ++ G  KEAL 
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193

Query: 151 KFLSMNVRPNSTTLVTALSTCSSLRCLKLGKAIHGLRMRTLNEENVILENALLDFYVRCA 210
            F  M+V PN  T V  L +   + CL LGK IHGL ++  +  ++   NAL+D YV+C 
Sbjct: 194 TFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE 253

Query: 211 YLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVL 270
            L  A  +F ++ K+D VSW +MI G       +EA+ +F  M       P+   L +VL
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVL 313

Query: 271 SACSSISALHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCGNMEMAILIFKATEHKDI 330
           SAC+S+ A+  G+WVH YI +   +  D ++G A+++MY KCG +E A+ IF     K++
Sbjct: 314 SACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV 373

Query: 331 VSWSTIISGLAMNGLGKQAFVLFSLMLVHGISPDDVTFLGLLSACSHGGLINQGMMVFEA 390
            +W+ ++ GLA++G G ++   F  M+  G  P+ VTFL  L+AC H GL+++G   F  
Sbjct: 374 FTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHK 433

Query: 391 MKD-VYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNE 450
           MK   YN+ P++ HY CM+D+  +AGLLDEA   +K MP++ +  + GA+L AC+  G  
Sbjct: 434 MKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTL 493

Query: 451 KKYEK-VREWLLGSKGVTVGTFALLSNTYACCDRWNDANDVRVAMRSRGLKKMAGRSWIE 509
            +  K + +  L  +    G + LLSN +A   RW+D   +R  M+ +G+ K+ G S+IE
Sbjct: 494 MELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552

[Close]

BLAST of CsGy1G029680 vs. TAIR 10
Match: AT1G50270.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 330.5 bits (846), Expect = 2.4e-90
Identity = 175/463 (37.80%), Postives = 277/463 (59.83%), Query Frame = 0


Query: 51  YNQMLRYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYIL 110
           Y  M R     +  TF   LKA  F  +     + HAH++K G  SD F++NSL+  Y  
Sbjct: 92  YRHMRRNGVIPSRHTFPPLLKA-VFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSS 151

Query: 111 DGDVSSASLIFDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSM---NVRPNSTTLVTA 170
            G    AS +FD   D DVV+WT++I G  + G   EA+  F+ M    V  N  T+V+ 
Sbjct: 152 SGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 211

Query: 171 LSTCSSLRCLKLGKAIHGLRMRTLNEE-NVILENALLDFYVRCAYLRSAENLFEKMPKRD 230
           L     +  ++ G+++HGL + T   + +V + ++L+D Y +C+    A+ +F++MP R+
Sbjct: 212 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN 271

Query: 231 VVSWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVH 290
           VV+WT +I GY QS   ++ + VF+ M+   +  PNE TL +VLSAC+ + ALH G+ VH
Sbjct: 272 VVTWTALIAGYVQSRCFDKGMLVFEEMLK-SDVAPNEKTLSSVLSACAHVGALHRGRRVH 331

Query: 291 SYINSRHDVIIDGNVGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLG 350
            Y+  ++ + I+   G  LI++YVKCG +E AIL+F+    K++ +W+ +I+G A +G  
Sbjct: 332 CYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYA 391

Query: 351 KQAFVLFSLMLVHGISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYAC 410
           + AF LF  ML   +SP++VTF+ +LSAC+HGGL+ +G  +F +MK  +N+ P+  HYAC
Sbjct: 392 RDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYAC 451

Query: 411 MVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVT 470
           MVD++G+ GLL+EA+A I+ MPME    VWGAL  +C LH + +  +     ++  +   
Sbjct: 452 MVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSH 511

Query: 471 VGTFALLSNTYACCDRWNDANDVRVAMRSRGLKKMAGRSWIEM 510
            G + LL+N Y+    W++   VR  M+ + + K  G SWIE+
Sbjct: 512 SGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEV 551

[Close]

BLAST of CsGy1G029680 vs. TAIR 10
Match: AT3G05240.1 (mitochondrial editing factor 19 )

HSP 1 Score: 330.5 bits (846), Expect = 2.4e-90
Identity = 179/496 (36.09%), Postives = 285/496 (57.46%), Query Frame = 0


Query: 26  PKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSSHNHFTFTYALKACCFLHQTQKGLEI 85
           P  +I+N ++    NS  P+  L  Y +MLR   S ++FTF Y LKAC  L   Q G  +
Sbjct: 70  PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129

Query: 86  HAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLIFDSIPDPDVVSWTSIISGL---SKL 145
           H  ++K+G   ++++   LLH Y+  G+V+    +F+ IP  +VV+W S+ISG    ++ 
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189

Query: 146 GFEKEALSKFLSMNVRPNSTTLVTALSTCSSLRCLKLGKAIHGLRMRTLNEE-------- 205
               EA  +  S  V+ N T +V  L  C   + +  GK  HG  ++ L  +        
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGF-LQGLGFDPYFQSKVG 249

Query: 206 -NVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVRVFQNM 265
            NVIL  +L+D Y +C  LR+A  LF+ MP+R +VSW ++I GY+Q+G  EEA+ +F +M
Sbjct: 250 FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 309

Query: 266 VHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCG 325
           + +G A P++ T ++V+ A        LGQ +H+Y+ S+   + D  +  AL+NMY K G
Sbjct: 310 LDLGIA-PDKVTFLSVIRASMIQGCSQLGQSIHAYV-SKTGFVKDAAIVCALVNMYAKTG 369

Query: 326 NMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG-ISPDDVTFLGLL 385
           + E A   F+  E KD ++W+ +I GLA +G G +A  +F  M   G  +PD +T+LG+L
Sbjct: 370 DAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVL 429

Query: 386 SACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAE 445
            ACSH GL+ +G   F  M+D++ + P + HY CMVD+  +AG  +EAE  +K MP++  
Sbjct: 430 YACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPN 489

Query: 446 GPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACCDRWNDANDVRVA 505
             +WGALL+ C +H N +  +++R  +   + +  G + LLSN YA   RW D   +R +
Sbjct: 490 VNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRES 549

Query: 506 MRSRGLKKMAGRSWIE 509
           M+S+ + K+ G S +E
Sbjct: 550 MKSKRVDKVLGHSSVE 562

[Close]

BLAST of CsGy1G029680 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 328.9 bits (842), Expect = 7.1e-90
Identity = 183/531 (34.46%), Postives = 289/531 (54.43%), Query Frame = 0


Query: 21  KLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRY---PSSHNHFTFTYALKACCFLH 80
           K + NP    +N  +     S  P+    LY QMLR+    S  +HFT+    K C  L 
Sbjct: 111 KGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLR 170

Query: 81  QTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLIFDSIPDPDVVSWTSIIS 140
            +  G  I  H++K        + N+ +H +   GD+ +A  +FD  P  D+VSW  +I+
Sbjct: 171 LSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLIN 230

Query: 141 GLSKLGFEKEALSKFLSM---NVRPNSTTLVTALSTCSSLRCLKLGKAIH------GLRM 200
           G  K+G  ++A+  +  M    V+P+  T++  +S+CS L  L  GK  +      GLRM
Sbjct: 231 GYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRM 290

Query: 201 RTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVR 260
                  + L NAL+D + +C  +  A  +F+ + KR +VSWTTMI GYA+ GL + + +
Sbjct: 291 ------TIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRK 350

Query: 261 VFQNM------------------------------VHVGEAIPNEATLVNVLSACSSISA 320
           +F +M                              +      P+E T+++ LSACS + A
Sbjct: 351 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGA 410

Query: 321 LHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIIS 380
           L +G W+H YI  ++ + ++  +G +L++MY KCGN+  A+ +F   + ++ ++++ II 
Sbjct: 411 LDVGIWIHRYI-EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIG 470

Query: 381 GLAMNGLGKQAFVLFSLMLVHGISPDDVTFLGLLSACSHGGLINQGMMVFEAMKDVYNIS 440
           GLA++G    A   F+ M+  GI+PD++TF+GLLSAC HGG+I  G   F  MK  +N++
Sbjct: 471 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLN 530

Query: 441 PQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREW 500
           PQ++HY+ MVD+ G+AGLL+EA+  ++ MPMEA+  VWGALL  C++HGN +  EK  + 
Sbjct: 531 PQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKK 590

Query: 501 LLGSKGVTVGTFALLSNTYACCDRWNDANDVRVAMRSRGLKKMAGRSWIEM 510
           LL       G + LL   Y   + W DA   R  M  RG++K+ G S IE+
Sbjct: 591 LLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634

The following BLAST results are available for this feature:

BLAST of CsGy1G029680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LN01	4.1e-98	36.83	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SZK1	1.5e-89	37.50	Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX...	[more]
Q9MA95	3.4e-89	36.09	Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis th...	[more]
Q9SX45	3.4e-89	37.80	Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX...	[more]
Q9SJZ3	1.0e-88	34.46	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]

BLAST of CsGy1G029680 vs. NCBI nr


Match Name	Identity	Description
XP_011660133.1	98.84	pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 ...	[more]
TYK18848.1	94.97	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008450427.1	94.93	PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-...	[more]
XP_038878297.1	90.89	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benin...	[more]
XP_011660134.1	92.05	pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X2 ...	[more]

BLAST of CsGy1G029680 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0LXJ1	98.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613550 PE=4 SV=1	[more]
A0A5D3D5L6	94.97	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DY27	94.93	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor...	[more]
A0A1S4DY30	88.50	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor...	[more]
A0A5A7UY28	94.78	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CsGy1G029680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08070.1	2.9e-99	36.83	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G38010.1	1.1e-90	37.50	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G50270.1	2.4e-90	37.80	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G05240.1	2.4e-90	36.09	mitochondrial editing factor 19	[more]
AT2G22410.1	7.1e-90	34.46	SLOW GROWTH 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 331..364 e-value: 6.1E-6 score: 24.1 coord: 228..257 e-value: 9.7E-6 score: 23.5 coord: 404..427 e-value: 6.1E-4 score: 17.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 225..273 e-value: 6.8E-8 score: 32.6 coord: 328..376 e-value: 5.8E-10 score: 39.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 303..323 e-value: 0.0054 score: 16.9 coord: 130..155 e-value: 0.0018 score: 18.4 coord: 404..428 e-value: 6.7E-4 score: 19.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 400..434 score: 8.692369
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 226..260 score: 10.785976
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 329..363 score: 10.402331
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 30..190 e-value: 8.0E-21 score: 76.7 coord: 305..514 e-value: 1.3E-35 score: 125.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 191..298 e-value: 2.1E-16 score: 62.2
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 51..508
None	No IPR available	PANTHER	PTHR47928:SF138	OS03G0216400 PROTEIN	coord: 51..508

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G029680.2	CsGy1G029680.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding