CsGy1G029040 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G029040
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	(1->3)-beta-glucan endohydrolase
Location	Gy14Chr1: 27057014 .. 27057683 (+)
RNA-Seq Expression	CsGy1G029040
Synteny	CsGy1G029040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGCATAATTTCCATGTGATTTCCCTATTATTCATGGTACTCATGTCATCCATTGTCTAGAGGAAACAACATTCTTGGTGCATATCATGGATCCGAAGGTAACAACCTCCCACCACCATGGAAGGTGGTGCAACTCTGCCAAAAATACAATATTCGTCGCATTCGATTCAGTGAACCAAATCTCGATATTCTCTAACAGTTTCGTGGCACATATATCGAAGTCTCTTTTAGCGTACCAGGTGCATTGATAACAAACCAGGCGACCAATGACACGACGGTGGAGGAGTGGTTTGTCAAGTACGTCGTACCATTCATCGACGAGTTCACCATCAACTACATCGTTGTTGGTGACAAGGTCATACCGGGACTGAACGACAACATATTGCCTGTCATGAAATCCCTTCAAAATCTTCTCAATAGTCGTTACCTCGGACAAGTGAAAATCACCACGATGGTTGGCTTAGCCGCTTTGGGGGTTCAAACCCCTCCATCTAGTGGCGCTTTTGACCCAAACGTTCTCGAGAACATGAAAGGAATCCTTCAGTTCTTATGGGGACAAGGCTCGCCTTTGATGCTTAGCTTATATCCCCATTATGCATATGCTTACACGAGATACACTAATAATATAAGTTTGGGTTATGCAACATTCACTTCTCAAACATAA

mRNA sequence

ATGGCAAAGCATAATTTCCATTTTCGTGGCACATATATCGAAGTCTCTTTTAGCGTACCAGGTGCATTGATAACAAACCAGGCGACCAATGACACGACGGTGGAGGAGTGGTTTGTCAAGTACGTCGTACCATTCATCGACGAGTTCACCATCAACTACATCGTTGTTGGTGACAAGGTCATACCGGGACTGAACGACAACATATTGCCTGTCATGAAATCCCTTCAAAATCTTCTCAATAGTCGTTACCTCGGACAAGTGAAAATCACCACGATGGTTGGCTTAGCCGCTTTGGGGGTTCAAACCCCTCCATCTAGTGGCGCTTTTGACCCAAACGTTCTCGAGAACATGAAAGGAATCCTTCAGTTCTTATGGGGACAAGGCTCGCCTTTGATGCTTAGCTTATATCCCCATTATGCATATGCTTACACGAGATACACTAATAATATAAGTTTGGGTTATGCAACATTCACTTCTCAAACATAA

Coding sequence (CDS)

ATGGCAAAGCATAATTTCCATTTTCGTGGCACATATATCGAAGTCTCTTTTAGCGTACCAGGTGCATTGATAACAAACCAGGCGACCAATGACACGACGGTGGAGGAGTGGTTTGTCAAGTACGTCGTACCATTCATCGACGAGTTCACCATCAACTACATCGTTGTTGGTGACAAGGTCATACCGGGACTGAACGACAACATATTGCCTGTCATGAAATCCCTTCAAAATCTTCTCAATAGTCGTTACCTCGGACAAGTGAAAATCACCACGATGGTTGGCTTAGCCGCTTTGGGGGTTCAAACCCCTCCATCTAGTGGCGCTTTTGACCCAAACGTTCTCGAGAACATGAAAGGAATCCTTCAGTTCTTATGGGGACAAGGCTCGCCTTTGATGCTTAGCTTATATCCCCATTATGCATATGCTTACACGAGATACACTAATAATATAAGTTTGGGTTATGCAACATTCACTTCTCAAACATAA

Protein sequence

MAKHNFHFRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDNILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT*

Homology

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BLAST of CsGy1G029040 vs. ExPASy Swiss-Prot
Match: O22317 (Glucan endo-1,3-beta-glucosidase OS=Musa acuminata OX=4641 GN=BANGLUC PE=1 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-19
Identity = 56/154 (36.36%), Postives = 89/154 (57.79%), Query Frame = 0


Query: 9   RGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG--LND 68
           R + I+V   VP + + + A+N +   +W  + VV +    +  YI VG+++IPG  L  
Sbjct: 72  RNSNIQVLLDVPRSDVQSLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQ 131

Query: 69  NILPVMKSLQNLLNSRYL-GQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLW 128
            ILP M+++ N L+S  L  Q+K++T V    LG   PPS+GAF       +  I+QFL 
Sbjct: 132 YILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLA 191

Query: 129 GQGSPLMLSLYPHYAYAYTRYTNNISLGYATFTS 160
             G+PL++++YP+  ++YT     ISL YA FT+
Sbjct: 192 SNGAPLLVNVYPY--FSYTGNPGQISLPYALFTA 223

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BLAST of CsGy1G029040 vs. ExPASy Swiss-Prot
Match: A7PQW3 (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00120 PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 6.4e-18
Identity = 57/157 (36.31%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 9   RGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIP-GLN-- 68
           RG+ IE+   VP   + + A++ +    W    VV +  E    YI VG++V+P G N  
Sbjct: 73  RGSDIELILDVPNTDLQSLASDASAAATWVQNNVVNYASEVKFRYIAVGNEVLPTGSNAQ 132

Query: 69  --DNILPVMKSLQNLLNSRYL-GQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQ 128
               +LP MK++Q+ + S  L  Q+K++T    A LG   PPS G+F  +V   +  I+ 
Sbjct: 133 YAQYVLPAMKNVQSAITSAGLQDQIKVSTATFSAVLGKSYPPSEGSFSDDVSSFINPIIS 192

Query: 129 FLWGQGSPLMLSLYPHYAYAYTRYTNNISLGYATFTS 160
           FL   GSPL+ ++YP+  ++YT  T NI L YA FT+
Sbjct: 193 FLAENGSPLLANIYPY--FSYTGDTQNIRLDYALFTA 227

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BLAST of CsGy1G029040 vs. ExPASy Swiss-Prot
Match: P12257 (Lichenase-2 (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-17
Identity = 51/150 (34.00%), Postives = 82/150 (54.67%), Query Frame = 0


Query: 10  GTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDNIL 69
           GT I V    P  +++N A +      W VK  +    + +  Y+ VG++V  G   N++
Sbjct: 51  GTGINVVVGAPNDVLSNLAASPAAAASW-VKSNIQAYPKVSFRYVCVGNEVAGGATRNLV 110

Query: 70  PVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGS 129
           P MK++   L +  LG +K+TT V  A LGV +PPS+G+F       M  ++QFL    +
Sbjct: 111 PAMKNVHGALVAAGLGHIKVTTSVSQAILGVFSPPSAGSFTGEAAAFMGPVVQFLARTNA 170

Query: 130 PLMLSLYPHYAYAYTRYTNNISLGYATFTS 160
           PLM ++YP+ A+AY    + + +GYA F +
Sbjct: 171 PLMANIYPYLAWAYN--PSAMDMGYALFNA 197

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BLAST of CsGy1G029040 vs. ExPASy Swiss-Prot
Match: O49352 (Probable glucan endo-1,3-beta-glucosidase BG4 OS=Arabidopsis thaliana OX=3702 GN=BG4 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.2e-17
Identity = 51/150 (34.00%), Postives = 88/150 (58.67%), Query Frame = 0


Query: 13  IEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG-LNDNILPV 72
           IEV+  V    +   A ++  V+ WF   +  ++ +  I +I VG++VIPG +   +LPV
Sbjct: 82  IEVTVGVKDQDLAALAASEEAVKGWFAANIESYLADVNITFITVGNEVIPGPIGPQVLPV 141

Query: 73  MKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPL 132
           M+SL NL+ SR L  + I+T+V ++ L    PPS+G F     E +  +L+ L    +P+
Sbjct: 142 MQSLTNLVKSRNL-PISISTVVAMSNLEQSYPPSAGMFTSQAREQLVPVLKLLSQTSTPI 201

Query: 133 MLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           ++++YP++AYA      NI L YA+F +++
Sbjct: 202 LVNIYPYFAYASD--PANIRLDYASFNTKS 228

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BLAST of CsGy1G029040 vs. ExPASy Swiss-Prot
Match: O49353 (Probable glucan endo-1,3-beta-glucosidase BG5 OS=Arabidopsis thaliana OX=3702 GN=BG5 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.3e-17
Identity = 50/149 (33.56%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 13  IEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG-LNDNILPV 72
           I V+  V    +   + ++  V+ WF   + P++ +  I +I VG++VIPG +   +LPV
Sbjct: 91  IAVTVGVRDQDLAALSASEEAVKGWFATNIEPYLSDINIAFITVGNEVIPGPIGPQVLPV 150

Query: 73  MKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPL 132
           M+SL NL+ SR L  + I+T+V +  L    PPS+G F     E +  +L+ L    SP+
Sbjct: 151 MQSLTNLVKSRNL-PISISTVVAMWNLEQSYPPSAGMFTSQAREQLVPVLKLLSQTNSPI 210

Query: 133 MLSLYPHYAYAYTRYTNNISLGYATFTSQ 161
           ++ +YP+++YA     ++I L YATF ++
Sbjct: 211 LVKIYPYFSYASD--PSSIRLDYATFNTE 236

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BLAST of CsGy1G029040 vs. NCBI nr
Match: KAE8653485.1 (hypothetical protein Csa_007188 [Cucumis sativus])

HSP 1 Score: 309 bits (791), Expect = 9.44e-103
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN
Sbjct: 212 FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 271

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 127
           ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ
Sbjct: 272 ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 331

Query: 128 GSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 161
           GSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT
Sbjct: 332 GSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 365

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BLAST of CsGy1G029040 vs. NCBI nr
Match: XP_031742631.1 (probable glucan endo-1,3-beta-glucosidase BG4 [Cucumis sativus])

HSP 1 Score: 291 bits (745), Expect = 1.30e-97
Identity = 144/146 (98.63%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN
Sbjct: 5   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 64

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 127
           ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ
Sbjct: 65  ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 124

Query: 128 GSPLMLSLYPHYAYAYTRYTNNISLG 153
           GSPLMLSLYPHYAYAYTRYTNNI++G
Sbjct: 125 GSPLMLSLYPHYAYAYTRYTNNINVG 150

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BLAST of CsGy1G029040 vs. NCBI nr
Match: XP_031742604.1 (glucan endo-1,3-beta-glucosidase-like [Cucumis sativus] >XP_031742613.1 glucan endo-1,3-beta-glucosidase-like [Cucumis sativus] >XP_031742620.1 glucan endo-1,3-beta-glucosidase-like [Cucumis sativus] >KAE8653446.1 hypothetical protein Csa_007050 [Cucumis sativus] >KAE8653449.1 hypothetical protein Csa_007296 [Cucumis sativus] >KAE8653453.1 hypothetical protein Csa_006942 [Cucumis sativus])

HSP 1 Score: 276 bits (706), Expect = 1.08e-91
Identity = 139/154 (90.26%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRGT IEVSFSVPG LI+NQATN T VEEWFVKYVVPFI EFTINYIVVGDKVIPGL+DN
Sbjct: 71  FRGTNIEVSFSVPGELISNQATNHTAVEEWFVKYVVPFIGEFTINYIVVGDKVIPGLDDN 130

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 127
           ILPVM+SLQ+LLNSRYLGQVKITTMVGL ALGVQ+PPSSGAFDPNVLENMKGIL+FLWGQ
Sbjct: 131 ILPVMRSLQDLLNSRYLGQVKITTMVGLTALGVQSPPSSGAFDPNVLENMKGILKFLWGQ 190

Query: 128 GSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 161
           GSPLMLSLYP+ AYAYT YTNNISLGYATFTSQT
Sbjct: 191 GSPLMLSLYPYDAYAYTGYTNNISLGYATFTSQT 224

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BLAST of CsGy1G029040 vs. NCBI nr
Match: XP_031742619.1 (probable glucan endo-1,3-beta-glucosidase BG4 [Cucumis sativus] >KAE8653451.1 hypothetical protein Csa_007530 [Cucumis sativus])

HSP 1 Score: 276 bits (706), Expect = 1.41e-90
Identity = 139/154 (90.26%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRGT IEVSFSVPG LI+NQATN T VEEWFVKYVVPFI EFTINYIVVGDKVIPGL+DN
Sbjct: 39  FRGTNIEVSFSVPGELISNQATNHTAVEEWFVKYVVPFIGEFTINYIVVGDKVIPGLDDN 98

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 127
           ILPVM+SLQ+LLNSRYLGQVKITTMVGL ALGVQ+PPSSGAFDPNVLENMKGIL+FLWGQ
Sbjct: 99  ILPVMRSLQDLLNSRYLGQVKITTMVGLTALGVQSPPSSGAFDPNVLENMKGILKFLWGQ 158

Query: 128 GSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 161
           GSPLMLSLYP+ AYAYT YTNNISLGYATFTSQT
Sbjct: 159 GSPLMLSLYPYDAYAYTGYTNNISLGYATFTSQT 192

[Close]

BLAST of CsGy1G029040 vs. NCBI nr
Match: XP_004144115.3 (glucan endo-1,3-beta-glucosidase [Cucumis sativus])

HSP 1 Score: 276 bits (705), Expect = 3.68e-90
Identity = 139/154 (90.26%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRGT IEVSFSVPG LI+NQATN T VEEWFVKYVVPFI EFTINYIVVGDKVIPGL+DN
Sbjct: 58  FRGTGIEVSFSVPGELISNQATNHTAVEEWFVKYVVPFIGEFTINYIVVGDKVIPGLDDN 117

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 127
           ILPVM+SLQ+LLNSRYLGQVKITTMVGL ALGVQ+PPSSGAFDPNVLENMKGIL+FLWGQ
Sbjct: 118 ILPVMRSLQDLLNSRYLGQVKITTMVGLTALGVQSPPSSGAFDPNVLENMKGILKFLWGQ 177

Query: 128 GSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 161
           GSPLMLSLYP+ AYAYT YTNNISLGYATFTSQT
Sbjct: 178 GSPLMLSLYPYDAYAYTGYTNNISLGYATFTSQT 211

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BLAST of CsGy1G029040 vs. ExPASy TrEMBL
Match: A0A0A0LWM4 ((1->3)-beta-glucan endohydrolase OS=Cucumis sativus OX=3659 GN=Csa_1G595910 PE=3 SV=1)

HSP 1 Score: 274 bits (700), Expect = 2.65e-90
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 9   RGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDNI 68
           RGT IEVSFSVPG LI+NQATN T VEEWFVKYVVPFI EFTINYIVVGDKVIPGL+DNI
Sbjct: 7   RGTNIEVSFSVPGELISNQATNHTAVEEWFVKYVVPFIGEFTINYIVVGDKVIPGLDDNI 66

Query: 69  LPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQG 128
           LPVM+SLQ+LLNSRYLGQVKITTMVGL ALGVQ+PPSSGAFDPNVLENMKGIL+FLWGQG
Sbjct: 67  LPVMRSLQDLLNSRYLGQVKITTMVGLTALGVQSPPSSGAFDPNVLENMKGILKFLWGQG 126

Query: 129 SPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 161
           SPLMLSLYP+ AYAYT YTNNISLGYATFTSQT
Sbjct: 127 SPLMLSLYPYDAYAYTGYTNNISLGYATFTSQT 159

[Close]

BLAST of CsGy1G029040 vs. ExPASy TrEMBL
Match: A0A0A0LR03 ((1->3)-beta-glucan endohydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G416760 PE=3 SV=1)

HSP 1 Score: 276 bits (705), Expect = 2.68e-90
Identity = 139/154 (90.26%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRGT IEVSFSVPG LI NQATN T VEEWFVKYVVPFI EFTINYIVVGDKVIPGL+DN
Sbjct: 71  FRGTNIEVSFSVPGELIINQATNQTAVEEWFVKYVVPFIGEFTINYIVVGDKVIPGLDDN 130

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 127
           ILPVM+SLQ+LLNSRYLGQVKITTMVGL ALGVQ+PPSSGAFDPNVLENMKGIL+FLWGQ
Sbjct: 131 ILPVMRSLQDLLNSRYLGQVKITTMVGLTALGVQSPPSSGAFDPNVLENMKGILKFLWGQ 190

Query: 128 GSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 161
           GSPLMLSLYP+ AYAYT YTNNISLGYATFTSQT
Sbjct: 191 GSPLMLSLYPYDAYAYTGYTNNISLGYATFTSQT 224

[Close]

BLAST of CsGy1G029040 vs. ExPASy TrEMBL
Match: A0A5A7UIV1 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001690 PE=3 SV=1)

HSP 1 Score: 244 bits (624), Expect = 4.95e-78
Identity = 124/153 (81.05%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRG  IE+SFSV G LITN ATN T VEEWFV YV PFI +FTINYI+VGDK IPGL+DN
Sbjct: 72  FRGKDIELSFSVTGELITNMATNHTAVEEWFVNYVAPFIGDFTINYIIVGDKAIPGLDDN 131

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 127
           ILPVMKSLQ LLN RYLGQVKITT+VGLAALGVQTPPSSG FDPNVLENM+GILQFL GQ
Sbjct: 132 ILPVMKSLQVLLNGRYLGQVKITTLVGLAALGVQTPPSSGTFDPNVLENMRGILQFLHGQ 191

Query: 128 GSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQ 160
           GSPLMLSLYP+  YAYT  +NNISLGYA F SQ
Sbjct: 192 GSPLMLSLYPYQEYAYTGNSNNISLGYANFNSQ 224

[Close]

BLAST of CsGy1G029040 vs. ExPASy TrEMBL
Match: A0A5D3CDU1 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001660 PE=3 SV=1)

HSP 1 Score: 244 bits (624), Expect = 4.95e-78
Identity = 124/153 (81.05%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRG  IE+SFSV G LITN ATN T VEEWFV YV PFI +FTINYI+VGDK IPGL+DN
Sbjct: 72  FRGKDIELSFSVTGELITNMATNHTAVEEWFVNYVAPFIGDFTINYIIVGDKAIPGLDDN 131

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 127
           ILPVMKSLQ LLN RYLGQVKITT+VGLAALGVQTPPSSG FDPNVLENM+GILQFL GQ
Sbjct: 132 ILPVMKSLQVLLNGRYLGQVKITTLVGLAALGVQTPPSSGTFDPNVLENMRGILQFLHGQ 191

Query: 128 GSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQ 160
           GSPLMLSLYP+  YAYT  +NNISLGYA F SQ
Sbjct: 192 GSPLMLSLYPYQEYAYTGNSNNISLGYANFNSQ 224

[Close]

BLAST of CsGy1G029040 vs. ExPASy TrEMBL
Match: A0A5A7UQE4 ((1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001680 PE=3 SV=1)

HSP 1 Score: 235 bits (599), Expect = 2.65e-74
Identity = 118/153 (77.12%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGLNDN 67
           FRGT IEVSF V   LITN ATN T VEEWF  Y+ PFID+ TINYIVVGDK +PGL+D+
Sbjct: 71  FRGTNIEVSFGVSNGLITNMATNHTAVEEWFANYIAPFIDDLTINYIVVGDKAVPGLDDS 130

Query: 68  ILPVMKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQ 127
           ILPVMKSLQ+LLN R+LGQVKITT+VGL+ALGV+ PPSSGAFDPNV ENM+GILQFLWGQ
Sbjct: 131 ILPVMKSLQDLLNRRFLGQVKITTLVGLSALGVKAPPSSGAFDPNVFENMRGILQFLWGQ 190

Query: 128 GSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQ 160
           GSPLMLSL P+ AYAY    NNISLGYATFT Q
Sbjct: 191 GSPLMLSLNPYEAYAY----NNISLGYATFTPQ 219

[Close]

BLAST of CsGy1G029040 vs. TAIR 10
Match: AT5G20330.1 (beta-1,3-glucanase 4 )

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-18
Identity = 51/150 (34.00%), Postives = 88/150 (58.67%), Query Frame = 0


Query: 13  IEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG-LNDNILPV 72
           IEV+  V    +   A ++  V+ WF   +  ++ +  I +I VG++VIPG +   +LPV
Sbjct: 82  IEVTVGVKDQDLAALAASEEAVKGWFAANIESYLADVNITFITVGNEVIPGPIGPQVLPV 141

Query: 73  MKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPL 132
           M+SL NL+ SR L  + I+T+V ++ L    PPS+G F     E +  +L+ L    +P+
Sbjct: 142 MQSLTNLVKSRNL-PISISTVVAMSNLEQSYPPSAGMFTSQAREQLVPVLKLLSQTSTPI 201

Query: 133 MLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           ++++YP++AYA      NI L YA+F +++
Sbjct: 202 LVNIYPYFAYASD--PANIRLDYASFNTKS 228

[Close]

BLAST of CsGy1G029040 vs. TAIR 10
Match: AT5G20340.1 (beta-1,3-glucanase 5 )

HSP 1 Score: 88.2 bits (217), Expect = 6.6e-18
Identity = 50/149 (33.56%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 13  IEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG-LNDNILPV 72
           I V+  V    +   + ++  V+ WF   + P++ +  I +I VG++VIPG +   +LPV
Sbjct: 91  IAVTVGVRDQDLAALSASEEAVKGWFATNIEPYLSDINIAFITVGNEVIPGPIGPQVLPV 150

Query: 73  MKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPL 132
           M+SL NL+ SR L  + I+T+V +  L    PPS+G F     E +  +L+ L    SP+
Sbjct: 151 MQSLTNLVKSRNL-PISISTVVAMWNLEQSYPPSAGMFTSQAREQLVPVLKLLSQTNSPI 210

Query: 133 MLSLYPHYAYAYTRYTNNISLGYATFTSQ 161
           ++ +YP+++YA     ++I L YATF ++
Sbjct: 211 LVKIYPYFSYASD--PSSIRLDYATFNTE 236

[Close]

BLAST of CsGy1G029040 vs. TAIR 10
Match: AT1G33220.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 3.3e-17
Identity = 50/149 (33.56%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 13  IEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPG-LNDNILPV 72
           IEV+  V    +   + N+  V+ WF   + P++ +  I +I VG++VIPG +   +LPV
Sbjct: 82  IEVTVGVRDQDLGALSANEEAVKGWFATNIEPYLADVNIAFITVGNEVIPGPIGPQVLPV 141

Query: 73  MKSLQNLLNSRYLGQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWGQGSPL 132
           M+SL  L+ S  L  + I+T+V ++ L    PPS+G F     E +  +L+ L    +P+
Sbjct: 142 MQSLTILVKSMNL-PISISTVVAMSNLEQSYPPSAGEFTSQAREQLVPVLKLLSQTSTPI 201

Query: 133 MLSLYPHYAYAYTRYTNNISLGYATFTSQ 161
           ++++YP++ YA      NI L YATF ++
Sbjct: 202 LVNIYPYFPYASD--PTNIPLDYATFNTK 227

[Close]

BLAST of CsGy1G029040 vs. TAIR 10
Match: AT5G56590.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 79.0 bits (193), Expect = 4.0e-15
Identity = 52/160 (32.50%), Postives = 87/160 (54.37%), Query Frame = 0


Query: 8   FRGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVI--PGLN 67
           F  T IE+   VP + +   + + + V+ W    V+P+     I YI VG +    P +N
Sbjct: 68  FGNTSIELMIGVPNSDLNAFSQSQSNVDTWLKNSVLPYYPTTKITYITVGAESTDDPHIN 127

Query: 68  DNILPVMKSLQNLLNS-RYLG---QVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGIL 127
            +   V+ ++QN+L + R +G   ++K++T + L  L    PPS+GAF+ +    ++ +L
Sbjct: 128 ASSF-VVPAMQNVLTALRKVGLSRRIKVSTTLSLGILSRSFPPSAGAFNSSYAYFLRPML 187

Query: 128 QFLWGQGSPLMLSLYPHYAYAYTRYTNNISLGYATFTSQT 162
           +FL    SP M+ LYP+YAY  +   NN+SL Y  F S +
Sbjct: 188 EFLAENKSPFMIDLYPYYAYRDS--PNNVSLDYVLFESSS 224

[Close]

BLAST of CsGy1G029040 vs. TAIR 10
Match: AT4G16260.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.4e-14
Identity = 48/153 (31.37%), Postives = 79/153 (51.63%), Query Frame = 0


Query: 9   RGTYIEVSFSVPGALITNQATNDTTVEEWFVKYVVPFIDEFTINYIVVGDKVIPGL-NDN 68
           R T IEV   VP   +    TN ++   W    V+ +    +  YI VG++V P    D 
Sbjct: 67  RNTGIEVIIGVPNTDL-RSLTNPSSARSWLQNNVLNYYPAVSFKYIAVGNEVSPSNGGDV 126

Query: 69  ILPVMKSLQNLLNSRYL-GQVKITTMVGLAALGVQTPPSSGAFDPNVLENMKGILQFLWG 128
           +LP M+++ + L    L  ++K++T + +  +G   PPSSG F  +V   +  ++ FL  
Sbjct: 127 VLPAMRNVYDALRGANLQDRIKVSTAIDMTLIGNSFPPSSGEFRGDVRWYIDPVIGFLTS 186

Query: 129 QGSPLMLSLYPHYAYAYTRYTNNISLGYATFTS 160
             S L+ ++YP+++Y       +ISL YA FTS
Sbjct: 187 TNSALLANIYPYFSYVDN--PRDISLSYALFTS 216

The following BLAST results are available for this feature:

BLAST of CsGy1G029040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22317	2.0e-19	36.36	Glucan endo-1,3-beta-glucosidase OS=Musa acuminata OX=4641 GN=BANGLUC PE=1 SV=2	[more]
A7PQW3	6.4e-18	36.31	Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00120...	[more]
P12257	1.1e-17	34.00	Lichenase-2 (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
O49352	3.2e-17	34.00	Probable glucan endo-1,3-beta-glucosidase BG4 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O49353	9.3e-17	33.56	Probable glucan endo-1,3-beta-glucosidase BG5 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CsGy1G029040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653485.1	9.44e-103	100.00	hypothetical protein Csa_007188 [Cucumis sativus]	[more]
XP_031742631.1	1.30e-97	98.63	probable glucan endo-1,3-beta-glucosidase BG4 [Cucumis sativus]	[more]
XP_031742604.1	1.08e-91	90.26	glucan endo-1,3-beta-glucosidase-like [Cucumis sativus] >XP_031742613.1 glucan e...	[more]
XP_031742619.1	1.41e-90	90.26	probable glucan endo-1,3-beta-glucosidase BG4 [Cucumis sativus] >KAE8653451.1 hy...	[more]
XP_004144115.3	3.68e-90	90.26	glucan endo-1,3-beta-glucosidase [Cucumis sativus]	[more]

BLAST of CsGy1G029040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWM4	2.65e-90	90.20	(1->3)-beta-glucan endohydrolase OS=Cucumis sativus OX=3659 GN=Csa_1G595910 PE=3...	[more]
A0A0A0LR03	2.68e-90	90.26	(1->3)-beta-glucan endohydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G416760 PE=3...	[more]
A0A5A7UIV1	4.95e-78	81.05	(1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3CDU1	4.95e-78	81.05	(1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7UQE4	2.65e-74	77.12	(1->3)-beta-glucan endohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]

BLAST of CsGy1G029040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20330.1	2.3e-18	34.00	beta-1,3-glucanase 4	[more]
AT5G20340.1	6.6e-18	33.56	beta-1,3-glucanase 5	[more]
AT1G33220.1	3.3e-17	33.56	Glycosyl hydrolase superfamily protein	[more]
AT5G56590.1	4.0e-15	32.50	O-Glycosyl hydrolases family 17 protein	[more]
AT4G16260.1	3.4e-14	31.37	Glycosyl hydrolase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000490	Glycoside hydrolase family 17	PFAM	PF00332	Glyco_hydro_17	coord: 8..161 e-value: 5.6E-18 score: 65.6
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 5..161 e-value: 1.0E-34 score: 122.0
None	No IPR available	PANTHER	PTHR32227:SF305	GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN-RELATED	coord: 8..160
IPR044965	Glycoside hydrolase family 17, plant	PANTHER	PTHR32227	GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED	coord: 8..160
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 8..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G029040.1	CsGy1G029040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0042973	glucan endo-1,3-beta-D-glucosidase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds