CsGy1G028820 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTATTGGAACTCTTAAACCCTTAAATCCTTCATCTCCACTTTCATTTGTTCCTCACCCCATGAATTCCCTTAATCGCATTCAACTTCTTTCTTCAGCAGACAACAATCAAATTCTTCAACTGTTTCGCCAAATCAAACAACCTCATTTCGGTTCTTCCTTCTTCCATGGCAGATCCTTCTCCACCAGATCTTCTTCTTCTTCCTCGTCCTCCGGAGCCGGCAAGTTTATCAACGGCGACGATGAATGGAACGATACTTGGGAGTCCGCTTGGCTTCCTGAAGACCTTTCACCAAAGAACAAGGCGCCATGGGAGAGTGATGTGAACTTCCCGTCTGGAAACCCTACGGTTGTGTTTCCGTCGGACGTTGATGCAGATACCAAAGCGTTTGTTGAAGATATGACTGAGAATTGGGATGAGAGGCGGAAGGCTTCTCAAACGCAGAAACAAGGAGTGAATCAGGAAGAGAAGGGAGGTGATGGTGGTGGCGGTGGTGGGTCGCTTTATAGCTTGGAGAACATAAAGAAAGATTACAGATTGCAGAAGCAGAGGATTCATGCTAATTTGTGGATGAAGGAGATTGAGAAGCAAGAGGAGGCTAGGCTGGGGGATTCCATTGCTGGCAGTGGGGATGACATTGAAAGATTGATGGATAGCTGCTCTGAGTGAGTTATTCTTTCTCTCTTGTTAAGTGCAAATGGTTTAAGCCTGATGTTTGTGGTTTTTCTCTGCTGATCATATTATCTAGTGTAGATGTTTTGTTAATTGGATTGAGGAAGTAGGGTTTGGAATCTTGCAAGATACCTGAATTTCTAGCATTGTTTTAATGGAGAACCAAATATTTATTTACGAACGTGAATGAATATTCTAGGGTACAAAATAGAACTAGCCCCATGAAAAGAGTCCCGACTGTAACTTAAAAAAAGGACTCCAATCTAAAAGAATAAGACCCAACAGACAATTACAAAAACGTGGCCTATGCCCATGGCGGGGTAAATTTGGTATTAAAGCTAACGACAGTGTTAGGAAAACAACAAACGAAGAAAACTGAAAAATGTATGGAGCAGAGAAATCAACAGAGAGATTAAGTGGCTCACTAACTGTGTGTTAGTTAAGTTCACGTAAAAAATAAGAGAGCAACTTATTATTAGTAAGAAAATATCATATTACAGAGTCAAGAGAGCTTTCATCAAAACTCTGAACCAAAATTGTAAGTAACGCAAATATGAATTTAAATTAGTTGTTTGGAGTGCCATATAACATATTCAAAGCATTCCGACAAAACACAAGTCTTAAAGATACTTAACAATTTAGAAACCTTAGTCATCAAGAATTGGCTTGGGTATCCTAAGCCAGCCAGAGATTAATGGTCTGGTCAAGAACATAATTTAAGGAGTGGCCACTCAAAACCTGTTCATATGAAAAAGAAACACAATAAGGAAAATACGTATGCAAGTCACTGCCTTGAAAGCTTTTGTTTCTTTTCTTTTTTGTTCCTTTCTCCAAGCACGACAAATCTGAACTGCTATGCTATGGTTGTAGGATTTTTGAATCAGTCAATGATGATTTAAACCGTTCAAAAGTTCCAAGTTCTTCGGAGTTCAGAAATAAACCTGATGGATGGGAAACATTATCCAAAGGTCATGATGGAAATGTATGGGAGATGACACAAAGAGAAGAAGACATTCTCCAGCAGGAGTTTGATCGTCGTATTGCATACAACAAATTTCAGGTGCATTACGATTTCCTTGTTTTGCTATTGTTACTTCCGTAAAAGAAACTTTAAACATATTTCTTCTGAAGAGAGACGGAACATGTCATTAGAAAGATGAAATATACAAGGAAAGAGTACATTTGAAACACTAACGGAATTTAAAAGAAATTTTGAGTAATCACACGAGCGAAGCAAAGAATTCTAAGTGGATGAGAAACAATATGAACATTTAAGTCAACTTACTGTAGCTCAATTGGTTGACATATAAGAGGTCGAATGCCTCACCCTCATTAACTCTGTTGAAGATCATTCTCTTTAGCTAGATTACTAAACTTGAAATGGATATAATCACACGACTCTTTGGCTTCTTCTCCTCATATAATAACTAAATTATAGCACAGTTATTTACTGATACAATAATTAATCGCTCATGTTATCATGCCAACTAAATCCAGAGGTCTGTATGCATATAACATGGAATTCAGAACTCAAATTCAGACCAATTCACATAGAATGCGATAAAAAATTACTAAACTAGAAAAATCATGGAAGAAAACTGTAACCAGTTCTTCGATAACAGAACTGGTGTCATTGCATTGTTTGCAATAGAAAATGATTAATGAATGGTTGAAAATTTGATGTTACAATCTTAAAACATTCTTTAATCAAGGATACCTTCTCATTGTTTCCCTCTGCACTGTTGCTTCTTCAAAGGAACAATCTAGTATGAGATTCCATTGATTTTTGAACTCATTGCTTCGGATTTTCTATTCATTTTATGAAACTTTCTCTCTTGAGTGTATCCATTACCGAGTTCCTTGGTTTCATATGCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCAATCGATGGATGGAAATACATGATAGAGGAATTTGGGCCAAATGCCAAGAAAGGAAAAGGTAGTGTTTCAAGGTTGCCTAATCTTTCTGATTCTTCAACCCAACCCTTCAAGGAGGAAAAAGTTGTAGCCTCCCCTTCTCTCAAACCCTTAAGAAGGAGTTAACTCTGTGCAAGCTCTACTTATCGGACCATATGTGACTTAAAATTTTTGCAACCATTAGAAAAGCCCCAAGTCTGGTCTTATCTTGTCAACCAGAGTTTTGCACAACTGACACATGCATAACTAAGGACAAGAAATTCCAGGTTTGAATCCTCCAATTCCCAGTTTGTACTAAAAGAGAAAAAAGATATAATGTTACGTGGGTCATATTGATGTTTGTAAGTAACTATTCTAATAGAGGAGTTTGCTTCCTAGAAATTAGACCGACATTAAGCAAAAATGAAAGTTTTGCACACACTTGATTCATAGAAGAAAAATGAGTCTTAACCTGGCAAGCGGTTGATAATCTTATGATGTTAGTTCATAGGAGTTATTTTTATTTTATTTTTTATACTAAAATGTCAGTTAAGATACTATTTCTTTTTCCTTTTTTAGTACTGTGGAGATTATTAGGTATAAAAGTTATGCCAATAGCACTGAGTCAATCC GTTTTATTGGAACTCTTAAACCCTTAAATCCTTCATCTCCACTTTCATTTGTTCCTCACCCCATGAATTCCCTTAATCGCATTCAACTTCTTTCTTCAGCAGACAACAATCAAATTCTTCAACTGTTTCGCCAAATCAAACAACCTCATTTCGGTTCTTCCTTCTTCCATGGCAGATCCTTCTCCACCAGATCTTCTTCTTCTTCCTCGTCCTCCGGAGCCGGCAAGTTTATCAACGGCGACGATGAATGGAACGATACTTGGGAGTCCGCTTGGCTTCCTGAAGACCTTTCACCAAAGAACAAGGCGCCATGGGAGAGTGATGTGAACTTCCCGTCTGGAAACCCTACGGTTGTGTTTCCGTCGGACGTTGATGCAGATACCAAAGCGTTTGTTGAAGATATGACTGAGAATTGGGATGAGAGGCGGAAGGCTTCTCAAACGCAGAAACAAGGAGTGAATCAGGAAGAGAAGGGAGGTGATGGTGGTGGCGGTGGTGGGTCGCTTTATAGCTTGGAGAACATAAAGAAAGATTACAGATTGCAGAAGCAGAGGATTCATGCTAATTTGTGGATGAAGGAGATTGAGAAGCAAGAGGAGGCTAGGCTGGGGGATTCCATTGCTGGCAGTGGGGATGACATTGAAAGATTGATGGATAGCTGCTCTGAGATTTTTGAATCAGTCAATGATGATTTAAACCGTTCAAAAGTTCCAAGTTCTTCGGAGTTCAGAAATAAACCTGATGGATGGGAAACATTATCCAAAGGTCATGATGGAAATGTATGGGAGATGACACAAAGAGAAGAAGACATTCTCCAGCAGGAGTTTGATCGTCGTATTGCATACAACAAATTTCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCAATCGATGGATGGAAATACATGATAGAGGAATTTGGGCCAAATGCCAAGAAAGGAAAAGGTAGTGTTTCAAGGTTGCCTAATCTTTCTGATTCTTCAACCCAACCCTTCAAGGAGGAAAAAGTTGTAGCCTCCCCTTCTCTCAAACCCTTAAGAAGGAGTTAACTCTGTGCAAGCTCTACTTATCGGACCATATGTGACTTAAAATTTTTGCAACCATTAGAAAAGCCCCAAGTCTGGTCTTATCTTGTCAACCAGAGTTTTGCACAACTGACACATGCATAACTAAGGACAAGAAATTCCAGGTTTGAATCCTCCAATTCCCAGTTTGTACTAAAAGAGAAAAAAGATATAATGTTACGTGGGTCATATTGATGTTTGTAAGTAACTATTCTAATAGAGGAGTTTGCTTCCTAGAAATTAGACCGACATTAAGCAAAAATGAAAGTTTTGCACACACTTGATTCATAGAAGAAAAATGAGTCTTAACCTGGCAAGCGGTTGATAATCTTATGATGTTAGTTCATAGGAGTTATTTTTATTTTATTTTTTATACTAAAATGTCAGTTAAGATACTATTTCTTTTTCCTTTTTTAGTACTGTGGAGATTATTAGGTATAAAAGTTATGCCAATAGCACTGAGTCAATCC ATGAATTCCCTTAATCGCATTCAACTTCTTTCTTCAGCAGACAACAATCAAATTCTTCAACTGTTTCGCCAAATCAAACAACCTCATTTCGGTTCTTCCTTCTTCCATGGCAGATCCTTCTCCACCAGATCTTCTTCTTCTTCCTCGTCCTCCGGAGCCGGCAAGTTTATCAACGGCGACGATGAATGGAACGATACTTGGGAGTCCGCTTGGCTTCCTGAAGACCTTTCACCAAAGAACAAGGCGCCATGGGAGAGTGATGTGAACTTCCCGTCTGGAAACCCTACGGTTGTGTTTCCGTCGGACGTTGATGCAGATACCAAAGCGTTTGTTGAAGATATGACTGAGAATTGGGATGAGAGGCGGAAGGCTTCTCAAACGCAGAAACAAGGAGTGAATCAGGAAGAGAAGGGAGGTGATGGTGGTGGCGGTGGTGGGTCGCTTTATAGCTTGGAGAACATAAAGAAAGATTACAGATTGCAGAAGCAGAGGATTCATGCTAATTTGTGGATGAAGGAGATTGAGAAGCAAGAGGAGGCTAGGCTGGGGGATTCCATTGCTGGCAGTGGGGATGACATTGAAAGATTGATGGATAGCTGCTCTGAGATTTTTGAATCAGTCAATGATGATTTAAACCGTTCAAAAGTTCCAAGTTCTTCGGAGTTCAGAAATAAACCTGATGGATGGGAAACATTATCCAAAGGTCATGATGGAAATGTATGGGAGATGACACAAAGAGAAGAAGACATTCTCCAGCAGGAGTTTGATCGTCGTATTGCATACAACAAATTTCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCAATCGATGGATGGAAATACATGATAGAGGAATTTGGGCCAAATGCCAAGAAAGGAAAAGGTAGTGTTTCAAGGTTGCCTAATCTTTCTGATTCTTCAACCCAACCCTTCAAGGAGGAAAAAGTTGTAGCCTCCCCTTCTCTCAAACCCTTAAGAAGGAGTTAA MNSLNRIQLLSSADNNQILQLFRQIKQPHFGSSFFHGRSFSTRSSSSSSSSGAGKFINGDDEWNDTWESAWLPEDLSPKNKAPWESDVNFPSGNPTVVFPSDVDADTKAFVEDMTENWDERRKASQTQKQGVNQEEKGGDGGGGGGSLYSLENIKKDYRLQKQRIHANLWMKEIEKQEEARLGDSIAGSGDDIERLMDSCSEIFESVNDDLNRSKVPSSSEFRNKPDGWETLSKGHDGNVWEMTQREEDILQQEFDRRIAYNKFQIASFIKTHIFSRRRPIDGWKYMIEEFGPNAKKGKGSVSRLPNLSDSSTQPFKEEKVVASPSLKPLRRS* Homology
BLAST of CsGy1G028820 vs. ExPASy Swiss-Prot
Match: Q8S2G4 (Protein GAMETE CELL DEFECTIVE 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=GCD1 PE=2 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.8e-30 Identity = 93/311 (29.90%), Postives = 160/311 (51.45%), Query Frame = 0
BLAST of CsGy1G028820 vs. ExPASy Swiss-Prot
Match: A2WW22 (Protein GAMETE CELL DEFECTIVE 1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=GCD1 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.3e-30 Identity = 93/311 (29.90%), Postives = 160/311 (51.45%), Query Frame = 0
BLAST of CsGy1G028820 vs. ExPASy Swiss-Prot
Match: Q9LVA9 (Protein GAMETE CELL DEFECTIVE 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GCD1 PE=1 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 4.1e-27 Identity = 64/185 (34.59%), Postives = 110/185 (59.46%), Query Frame = 0
BLAST of CsGy1G028820 vs. NCBI nr
Match: XP_004144093.1 (uncharacterized protein LOC101222958 [Cucumis sativus] >KGN66392.1 hypothetical protein Csa_006903 [Cucumis sativus]) HSP 1 Score: 661 bits (1705), Expect = 2.41e-239 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CsGy1G028820 vs. NCBI nr
Match: XP_008451050.1 (PREDICTED: uncharacterized protein LOC103492453 [Cucumis melo] >KAA0055686.1 Mucin-related protein [Cucumis melo var. makuwa] >TYK09935.1 Mucin-related protein [Cucumis melo var. makuwa]) HSP 1 Score: 611 bits (1576), Expect = 1.19e-219 Identity = 310/335 (92.54%), Postives = 320/335 (95.52%), Query Frame = 0
BLAST of CsGy1G028820 vs. NCBI nr
Match: XP_038878422.1 (protein GAMETE CELL DEFECTIVE 1, mitochondrial [Benincasa hispida]) HSP 1 Score: 586 bits (1510), Expect = 1.17e-209 Identity = 299/333 (89.79%), Postives = 316/333 (94.89%), Query Frame = 0
BLAST of CsGy1G028820 vs. NCBI nr
Match: XP_022988172.1 (uncharacterized protein LOC111485489 [Cucurbita maxima]) HSP 1 Score: 559 bits (1441), Expect = 3.95e-199 Identity = 287/334 (85.93%), Postives = 302/334 (90.42%), Query Frame = 0
BLAST of CsGy1G028820 vs. NCBI nr
Match: XP_023515378.1 (uncharacterized protein LOC111779550 [Cucurbita pepo subsp. pepo] >XP_023515379.1 uncharacterized protein LOC111779550 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 555 bits (1429), Expect = 2.47e-197 Identity = 283/332 (85.24%), Postives = 301/332 (90.66%), Query Frame = 0
BLAST of CsGy1G028820 vs. ExPASy TrEMBL
Match: A0A0A0LZT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600820 PE=4 SV=1) HSP 1 Score: 661 bits (1705), Expect = 1.17e-239 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CsGy1G028820 vs. ExPASy TrEMBL
Match: A0A5D3CEI1 (Mucin-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00620 PE=4 SV=1) HSP 1 Score: 611 bits (1576), Expect = 5.77e-220 Identity = 310/335 (92.54%), Postives = 320/335 (95.52%), Query Frame = 0
BLAST of CsGy1G028820 vs. ExPASy TrEMBL
Match: A0A1S3BQ21 (uncharacterized protein LOC103492453 OS=Cucumis melo OX=3656 GN=LOC103492453 PE=4 SV=1) HSP 1 Score: 611 bits (1576), Expect = 5.77e-220 Identity = 310/335 (92.54%), Postives = 320/335 (95.52%), Query Frame = 0
BLAST of CsGy1G028820 vs. ExPASy TrEMBL
Match: A0A6J1JCB8 (uncharacterized protein LOC111485489 OS=Cucurbita maxima OX=3661 GN=LOC111485489 PE=4 SV=1) HSP 1 Score: 559 bits (1441), Expect = 1.91e-199 Identity = 287/334 (85.93%), Postives = 302/334 (90.42%), Query Frame = 0
BLAST of CsGy1G028820 vs. ExPASy TrEMBL
Match: A0A6J1HBR0 (uncharacterized protein LOC111461829 OS=Cucurbita moschata OX=3662 GN=LOC111461829 PE=4 SV=1) HSP 1 Score: 553 bits (1426), Expect = 3.18e-197 Identity = 284/332 (85.54%), Postives = 302/332 (90.96%), Query Frame = 0
BLAST of CsGy1G028820 vs. TAIR 10
Match: AT2G02880.1 (mucin-related ) HSP 1 Score: 344.7 bits (883), Expect = 8.1e-95 Identity = 177/277 (63.90%), Postives = 215/277 (77.62%), Query Frame = 0
BLAST of CsGy1G028820 vs. TAIR 10
Match: AT5G62270.1 (BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 123.6 bits (309), Expect = 2.9e-28 Identity = 64/185 (34.59%), Postives = 110/185 (59.46%), Query Frame = 0
BLAST of CsGy1G028820 vs. TAIR 10
Match: AT5G62270.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1). ) HSP 1 Score: 123.6 bits (309), Expect = 2.9e-28 Identity = 64/185 (34.59%), Postives = 110/185 (59.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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