CsGy1G028660 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G028660
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protochlorophyllide-dependent translocon component 52, chloroplastic-like
Location	Gy14Chr1: 26780269 .. 26783482 (+)
RNA-Seq Expression	CsGy1G028660
Synteny	CsGy1G028660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCATTTCCACAGCTACACACGCCTTCATTTCAATTTTCTCACCTTCAACAATCCTCCGATTCTCCCACTTCCCCGCTCTGCCCAAACCAGAATCAGATTCACACCCATGGAGGTTGCCAGAATTTCCTCTCCTCATCTAATCCTCATCCCAACCACAGTCAACAGAACCCTAACCCCCAATCCCTACTCTCTCGCCTCCAATCGGAATCCGCTGCCGAGATCGAGATCGAGATCATTTTCCAATTTCAAGACGCCGACGCATCGAAATGCGATTAGAAAGTGCGAATTACTCCGCACGGCCATGGCGTCCGACGTTGTCACTTCAGAACGACCGGAAGTGGAGGAAGAGAAGTTCGATTGGTTTGCGGAGTGGTATCCGGTGATGCCAGTGTGCGATTTGGACAAGAAAGTACCGATTGGGAAGAAGGTTTTGGGGTTGGATTTGGTGGTGTGGTGGGATAGGAATGAGAATGCGTGGAAGGTGTTTGATGATAGTTGTCCTCATAGATTGGCGCCGTTGTCGGAAGGGAGGATCGATCAGTGGGGGAGATTACAGTGTGTGTACCATGGATGGTGCTTTAATGGCTCTGGTGACTGTAAATTCATCCCTCAAGCGCCTCCCGATGGCCCTCCGGTAATCATTTAGTCTCTTTTCCTTTCTAATGTTTGTTTTGGTGTACTTTTGAAAAAGTGATTAAAAAGAAAAGATAAAAGAGTAATTATAATTTAGTCCTCGATGGAGGGTCCATTAATAATCCCCTACAATGGAAGGTCCATTAATAATCCCCTACAATGGAAGGTCCATTAATTTTAGAAAATAGCAAACAAGAAACAGAAAACAGGCTAAATTACCATTTAAGTTAGAATTTAATACTTATGGTTTGTTAAAATCTCATTAATAGTTCTTATTTGATAAAATACTCCCTACCATATGTGCTATTGATGGGTGTCGTCAAACCATAAGAATTAAATTTGAATTGTAAATCATAGAGTCTAAACAAAACATAAGGACAAAATTTCACTTATGAAATTTAAACAAACTTAGGGCTCAGTGCTTAGACTGATACAATTATTATCTTAAAATTTAAATTAACACAACTCAATTATTAATTGACGTAGACCCCCTTTTGTTTTAAGTATTTCCTTGTAAATTCTTTTATTTTGCTCAATGAAAGCTCGGTATCATATTTTAAAAAATCTAACTATGAACTAAAACAATCACTTATGTATGTTTTGAAAATGTAAGGACTACAGTTGACAAAAGCTAGATCAAAATGGGCGTTTTAGTACTGTATTGATCTATATAAACAAATGCTATATATATTCATCTCTTTTGATAATGTGTGGGGTAACATATTTTACATGGATAATAATTTTTTTTTAGTTTAATTCACTTAGTATTTTTAAAAATAACAAAATAAATTAAAATATTTACAAGCTATAGTAAAATTTTAGGTTCTATCACTGATAGTCTTCTATTACTATATCTTATCAATCACTATAAATGATAGAATTTGCTATAGGTTGTAGATATTTTATAAAATTTACTATTTTTAAAAATTTCGCTCAGTTCACATTGAATTTTCTTTTTAAAGCTTTCTTACTTATTTTATAAATAATTTTTCCACTCAAATATTTTGTAAGTTAGATCCTATATGGAAATGTGCTTTGATAATTGTAGGTGAATTTTGTATTGGGATCAATATGAATCTTATATGACATCATATAAACTTGTGATCTGAGCTACTAATATATTTAGTTTGGTATCAACAATATTATAAGATTCAGAAATAAAACAAAGAAAAATGCAGATGACAAATTTACGATGTCGAAATGATAAAAAGAAAAACTTTGTTGAATATAAAGGAATAGAACAGGTGATTTAACTGTTTGCATGAACTTGTATAAAAATTAGAAAGAGATATACAAACAATGATCTAAAATTTTATTTTATCATTTATCAACTTAACTTAAAGCATAAATCGGTAGTTAAACATTTCTACCAGTCTTATAGAGCCTATGGTTTGAATTTTCACCTTCATATTTGCGAAGTAATATTTTTTAAAATATACATCCATTATCATATTATTGAGAATGAGTATTTTTCATACATAAGCCTATTGAAGGCTGAATTTACAAATAAAGTGAACATACATCCATTGCTATAACATGCAGGTTCACTCATCCAAGAAGGCATGTGTTGCTATATATCCAACGACAGTGCAAAATGGCATACTTTGGTTCTGGCCAAACTCGGACCCCAAATTCAAAGATATCATTTTGGAGAAGGAACCTCCCTTTATTCCAGAGCTGGACGATCCATCTTATGTTAAGCTAGAGGGCAATAGGGATATGGCCTATGGGTAATCAGTAATCACTTCAAAGCCTCTCTCTGATTTTCATGCCTTTTGAAATGTCAAATGCAAAGAGCTAAAGCAAACAAATCAAAGATTTGTTCACTAATTCTTATTTATGTTTTTTAGGTATTGTTTACTAATTCTAATATCTGCATTTAGGAATTCTAGCATCTGAAAGTTGTTTTTATCAACAAAAAGAAAAGTAACTGAATTTAGGAAATAACCGTCCACAATCAAATCTACGGTGTCATGAAGACCATGTTTGTTGAAAAGATAGTTAAGTATCTTCATAAGACTAAACCAAAGTTTGAATAAAAACTATATTGTACTAGAATGGTGTTAGGTTTTTGTACTTGTTGATGTGATTAGCTTCTAGATAATGGTTTGGAGGAGAATGGGAAGGATGGGGTTGTTCTTTTTCACACCCGTAATTGTTCGAGTTCACTTACGTGCATCTCGACCCTACAACATTTGGATGTCAAGGAAACCCATAAAGATATTAAATCTTAGATAGGTTATCACCATGAATTGAACTCACAAACTCTTGAAAGGGAAAGGGAGTTGAGTATATATATATACATCTTATTCATTCATTTGAACTTTTGAGTTTAGCAATAATATGTATCGGAATTGTAAATTATGAGTTTGAACTCCTACAATGTCATTTAGTAGTGATATTCTAATCTGATTACTTTGTCATTGAAAATTGGTGTTTTCAGGTATGAAATACTGATTGAAAACCTTATGGACCCTGCCCATGTTCCCTACGCACACTACAAGATAATTCCAGCCCCACCATCAATAAAAAACAGATATCTTTGCCAATTCTATCTTCTCAACTCTTGCATTTGA

mRNA sequence

ATGATTCATTTCCACAGCTACACACGCCTTCATTTCAATTTTCTCACCTTCAACAATCCTCCGATTCTCCCACTTCCCCGCTCTGCCCAAACCAGAATCAGATTCACACCCATGGAGGTTGCCAGAATTTCCTCTCCTCATCTAATCCTCATCCCAACCACAGTCAACAGAACCCTAACCCCCAATCCCTACTCTCTCGCCTCCAATCGGAATCCGCTGCCGAGATCGAGATCGAGATCATTTTCCAATTTCAAGACGCCGACGCATCGAAATGCGATTAGAAAGTGCGAATTACTCCGCACGGCCATGGCGTCCGACGTTGTCACTTCAGAACGACCGGAAGTGGAGGAAGAGAAGTTCGATTGGTTTGCGGAGTGGTATCCGGTGATGCCAGTGTGCGATTTGGACAAGAAAGTACCGATTGGGAAGAAGGTTTTGGGGTTGGATTTGGTGGTGTGGTGGGATAGGAATGAGAATGCGTGGAAGGTGTTTGATGATAGTTGTCCTCATAGATTGGCGCCGTTGTCGGAAGGGAGGATCGATCAGTGGGGGAGATTACAGTGTGTGTACCATGGATGGTGCTTTAATGGCTCTGGTGACTGTAAATTCATCCCTCAAGCGCCTCCCGATGGCCCTCCGGTTCACTCATCCAAGAAGGCATGTGTTGCTATATATCCAACGACAGTGCAAAATGGCATACTTTGGTTCTGGCCAAACTCGGACCCCAAATTCAAAGATATCATTTTGGAGAAGGAACCTCCCTTTATTCCAGAGCTGGACGATCCATCTTATGTTAAGCTAGAGGGCAATAGGGATATGGCCTATGGGTATGAAATACTGATTGAAAACCTTATGGACCCTGCCCATGTTCCCTACGCACACTACAAGATAATTCCAGCCCCACCATCAATAAAAAACAGATATCTTTGCCAATTCTATCTTCTCAACTCTTGCATTTGA

Coding sequence (CDS)

ATGATTCATTTCCACAGCTACACACGCCTTCATTTCAATTTTCTCACCTTCAACAATCCTCCGATTCTCCCACTTCCCCGCTCTGCCCAAACCAGAATCAGATTCACACCCATGGAGGTTGCCAGAATTTCCTCTCCTCATCTAATCCTCATCCCAACCACAGTCAACAGAACCCTAACCCCCAATCCCTACTCTCTCGCCTCCAATCGGAATCCGCTGCCGAGATCGAGATCGAGATCATTTTCCAATTTCAAGACGCCGACGCATCGAAATGCGATTAGAAAGTGCGAATTACTCCGCACGGCCATGGCGTCCGACGTTGTCACTTCAGAACGACCGGAAGTGGAGGAAGAGAAGTTCGATTGGTTTGCGGAGTGGTATCCGGTGATGCCAGTGTGCGATTTGGACAAGAAAGTACCGATTGGGAAGAAGGTTTTGGGGTTGGATTTGGTGGTGTGGTGGGATAGGAATGAGAATGCGTGGAAGGTGTTTGATGATAGTTGTCCTCATAGATTGGCGCCGTTGTCGGAAGGGAGGATCGATCAGTGGGGGAGATTACAGTGTGTGTACCATGGATGGTGCTTTAATGGCTCTGGTGACTGTAAATTCATCCCTCAAGCGCCTCCCGATGGCCCTCCGGTTCACTCATCCAAGAAGGCATGTGTTGCTATATATCCAACGACAGTGCAAAATGGCATACTTTGGTTCTGGCCAAACTCGGACCCCAAATTCAAAGATATCATTTTGGAGAAGGAACCTCCCTTTATTCCAGAGCTGGACGATCCATCTTATGTTAAGCTAGAGGGCAATAGGGATATGGCCTATGGGTATGAAATACTGATTGAAAACCTTATGGACCCTGCCCATGTTCCCTACGCACACTACAAGATAATTCCAGCCCCACCATCAATAAAAAACAGATATCTTTGCCAATTCTATCTTCTCAACTCTTGCATTTGA

Protein sequence

MIHFHSYTRLHFNFLTFNNPPILPLPRSAQTRIRFTPMEVARISSPHLILIPTTVNRTLTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYKIIPAPPSIKNRYLCQFYLLNSCI*

Homology

[Close]

BLAST of CsGy1G028660 vs. ExPASy Swiss-Prot
Match: Q8W496 (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.3e-98
Identity = 166/262 (63.36%), Postives = 199/262 (75.95%), Query Frame = 0


Query: 71  NPLPRSRSRSFSNFKTPTHRNAI--RKCELLRTAMASD------VVTSERPEVE------ 130
           N  PR R  SFSN   P   N++  RK     TA++S         T+  PE E      
Sbjct: 17  NTKPRFRC-SFSNPSLPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPG 76

Query: 131 EEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLS 190
            +KFDW+A WYPVMP+CDLDKKVP GKKV+G+DLVVWWDRNE  WKV DD+CPHRLAPLS
Sbjct: 77  SDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLS 136

Query: 191 EGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWF 250
           +GRIDQWGRLQCVYHGWCFNGSGDCK IPQAPPDGPPVH+ K+ACVA+YP+TVQ+ I+WF
Sbjct: 137 DGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWF 196

Query: 251 WPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYK 310
           WPNSDPK+K+II   +PP+IPEL+DPS+ KL GNRD+ YGY++L+ENLMDPAHVPYAHY 
Sbjct: 197 WPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYG 256

Query: 311 IIPAPPSIKNRYLCQFYLLNSC 319
           ++  P   K +Y+    + NSC
Sbjct: 257 LMRFPKP-KGKYI--ICISNSC 274

[Close]

BLAST of CsGy1G028660 vs. ExPASy Swiss-Prot
Match: Q9FYC2 (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-48
Identity = 98/215 (45.58%), Postives = 126/215 (58.60%), Query Frame = 0


Query: 99  LRTAMASDVVTSERPE---VEEE----------KFDWFAEWYPVMPVCDLDKKVPIGKKV 158
           LR A    V TS+  E   +EEE          +F W   WYPV  V DLD  VP   ++
Sbjct: 48  LRVAAPPSVPTSDSTEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQL 107

Query: 159 LGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIP 218
           LG DLV+W+DRN+  W  FDD CPHRLAPLSEGR+D+ G LQC YHGW F G G C  IP
Sbjct: 108 LGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIP 167

Query: 219 QAPPDGPPVHS--SKKACVAIYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIP-ELDDP 278
           QA   GP   +  S +AC   +PT V  G+L+ WP  D    D     EPP +P + D P
Sbjct: 168 QAATSGPEARAVKSPRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKP 227

Query: 279 SYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYKI 298
            +  +   RD+ YGY+ L+EN+ DP+H+ +AH+K+
Sbjct: 228 EFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKV 260

[Close]

BLAST of CsGy1G028660 vs. ExPASy Swiss-Prot
Match: Q0DV66 (Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAO PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.1e-48
Identity = 89/184 (48.37%), Postives = 117/184 (63.59%), Query Frame = 0


Query: 117 EEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLS 176
           +EKF W   WYPV  V DLD  VP   ++L  DLV+W D     W   DD CPHRLAPLS
Sbjct: 73  DEKFVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRCPHRLAPLS 132

Query: 177 EGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHS--SKKACVAIYPTTVQNGIL 236
           EGRID+ G LQC YHGW F+GSG C  IPQA P+GP   +  S KAC   +PT V  G+L
Sbjct: 133 EGRIDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACAIKFPTLVSQGLL 192

Query: 237 WFWPNSDPKFKDIILEKEPPFIP-ELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYA 296
           + WP+ +   K      +PP +P E +DP++  +   RD+ YGY+ L+EN+ DP+H+ +A
Sbjct: 193 FVWPDENGWEK--ATATKPPMLPKEFEDPAFSTVTIQRDLYYGYDTLMENVSDPSHIEFA 252

Query: 297 HYKI 298
           H+K+
Sbjct: 253 HHKV 254

[Close]

BLAST of CsGy1G028660 vs. ExPASy Swiss-Prot
Match: Q9SK50 (Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.0e-31
Identity = 81/245 (33.06%), Postives = 120/245 (48.98%), Query Frame = 0


Query: 59  LTPNPYSLASNRNPLPRSRS-RSFSNFKTPTHRNAIRKCELLRTAMA------SDVVTS- 118
           LTP    L +   P P   + RS     T      +R+  +  TA++       DV+ + 
Sbjct: 12  LTPTSPILFTKVTPTPIIHNHRSTCTIPTKPRLRLLRRSAVAGTAVSDQTEGGGDVLLNP 71

Query: 119 -ERPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCP 178
            E   VE   +DW  EWYP+    ++ +  P+G  V    +V++ D  E   + ++D CP
Sbjct: 72  EEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEGTLRCYEDRCP 131

Query: 179 HRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTV 238
           HRLA LSEG++   GRL+C+YHGW F G G C  IPQ P         K ACV  Y    
Sbjct: 132 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAS---AKIPKAACVKTYEVKD 191

Query: 239 QNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAH 295
             G++W W ++    K     ++ P+      P +  +    ++ Y + IL+ENLMDPAH
Sbjct: 192 SQGVVWVWMST----KTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAH 247

[Close]

BLAST of CsGy1G028660 vs. ExPASy Swiss-Prot
Match: O49931 (Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.6e-31
Identity = 88/274 (32.12%), Postives = 134/274 (48.91%), Query Frame = 0


Query: 43  ISSPHLILIPTTVNRTLTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTA 102
           ++S +  L+PT  +  L  +P    S +  L  + S +FS  K  + R   R+ +    A
Sbjct: 5   LASANSFLLPTKTHFALHVSP--PPSKKTLLCTNPSSNFSFNKALSSR---RRKQAWCVA 64

Query: 103 MASDVVTSERPEVEEEK--------------------FDWFAEWYPVMPVCDLDKKVPIG 162
            A+DV  +   + EE++                    +DW  EWYP+    ++    P+G
Sbjct: 65  AAADVKDATLLDGEEDQKVLVGPSSEQERKGEREVADYDWTEEWYPLYLTKNVPHDAPLG 124

Query: 163 KKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCK 222
            KV   ++V++ D N+  ++ ++D CPHRLA LSEG++   GRL+C+YHGW F G G C 
Sbjct: 125 LKVYDKNIVLFRDGNDQ-FQCYEDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCV 184

Query: 223 FIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFWPN--SDPKFKDIILEKEPPFIPELD 282
            IPQ P D       K ACV  Y      G+LW W +  + P    I      P+     
Sbjct: 185 KIPQLPAD---AKIPKSACVKTYEVRDSQGVLWVWMSRKTPPNVSKI------PWFENFA 244

Query: 283 DPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAH 295
            P +  +    ++ Y + IL+ENLMDPAHVP +H
Sbjct: 245 RPGFQDISTTHELPYDHSILLENLMDPAHVPISH 262

[Close]

BLAST of CsGy1G028660 vs. NCBI nr
Match: XP_031741408.1 (protochlorophyllide-dependent translocon component 52, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 655 bits (1691), Expect = 2.08e-234
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MIHFHSYTRLHFNFLTFNNPPILPLPRSAQTRIRFTPMEVARISSPHLILIPTTVNRTLT 60
           MIHFHSYTRLHFNFLTFNNPPILPLPRSAQTRIRFTPMEVARISSPHLILIPTTVNRTLT
Sbjct: 1   MIHFHSYTRLHFNFLTFNNPPILPLPRSAQTRIRFTPMEVARISSPHLILIPTTVNRTLT 60

Query: 61  PNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTAMASDVVTSERPEVEEEKF 120
           PNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTAMASDVVTSERPEVEEEKF
Sbjct: 61  PNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTAMASDVVTSERPEVEEEKF 120

Query: 121 DWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRI 180
           DWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRI
Sbjct: 121 DWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRI 180

Query: 181 DQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFWPNS 240
           DQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFWPNS
Sbjct: 181 DQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFWPNS 240

Query: 241 DPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYKIIPA 300
           DPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYKIIPA
Sbjct: 241 DPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYKIIPA 300

Query: 301 PPSIKNR 307
           PPSIKNR
Sbjct: 301 PPSIKNR 307

[Close]

BLAST of CsGy1G028660 vs. NCBI nr
Match: XP_011660064.1 (protochlorophyllide-dependent translocon component 52, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 655 bits (1691), Expect = 2.17e-233
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MIHFHSYTRLHFNFLTFNNPPILPLPRSAQTRIRFTPMEVARISSPHLILIPTTVNRTLT 60
           MIHFHSYTRLHFNFLTFNNPPILPLPRSAQTRIRFTPMEVARISSPHLILIPTTVNRTLT
Sbjct: 1   MIHFHSYTRLHFNFLTFNNPPILPLPRSAQTRIRFTPMEVARISSPHLILIPTTVNRTLT 60

Query: 61  PNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTAMASDVVTSERPEVEEEKF 120
           PNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTAMASDVVTSERPEVEEEKF
Sbjct: 61  PNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTAMASDVVTSERPEVEEEKF 120

Query: 121 DWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRI 180
           DWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRI
Sbjct: 121 DWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRI 180

Query: 181 DQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFWPNS 240
           DQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFWPNS
Sbjct: 181 DQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFWPNS 240

Query: 241 DPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYKIIPA 300
           DPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYKIIPA
Sbjct: 241 DPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYKIIPA 300

Query: 301 PPSIKNR 307
           PPSIKNR
Sbjct: 301 PPSIKNR 307

[Close]

BLAST of CsGy1G028660 vs. NCBI nr
Match: KAE8653476.1 (hypothetical protein Csa_007178 [Cucumis sativus])

HSP 1 Score: 607 bits (1566), Expect = 3.15e-219
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 38  MEVARISSPHLILIPTTVNRTLTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCE 97
           MEVARISSPHLILIPTTVNRTLTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCE
Sbjct: 1   MEVARISSPHLILIPTTVNRTLTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCE 60

Query: 98  LLRTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRN 157
           LLRTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRN
Sbjct: 61  LLRTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRN 120

Query: 158 ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSS 217
           ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSS
Sbjct: 121 ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSS 180

Query: 218 KKACVAIYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGY 277
           KKACVAIYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGY
Sbjct: 181 KKACVAIYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGY 240

Query: 278 EILIENLMDPAHVPYAHYKIIPAPPSIKNRYLCQFYLLNSCI 319
           EILIENLMDPAHVPYAHYKIIPAPPSIKNRYLCQFYLLNSCI
Sbjct: 241 EILIENLMDPAHVPYAHYKIIPAPPSIKNRYLCQFYLLNSCI 282

[Close]

BLAST of CsGy1G028660 vs. NCBI nr
Match: KAA0055705.1 (protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa])

HSP 1 Score: 570 bits (1469), Expect = 1.79e-204
Identity = 264/282 (93.62%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 38  MEVARISSPHLILIPTTVNRTLTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCE 97
           MEVARISSPHLI IPTT NRTLTPNP S+ASNRNP PRSRS  FS+FKT THRNAIRKCE
Sbjct: 1   MEVARISSPHLIHIPTTFNRTLTPNPSSIASNRNPPPRSRS--FSSFKTATHRNAIRKCE 60

Query: 98  LLRTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRN 157
           L+RTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDK+VP+GKKVLGLDLVVWWDRN
Sbjct: 61  LIRTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKRVPVGKKVLGLDLVVWWDRN 120

Query: 158 ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSS 217
           ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSG+CKFIPQAPPDGPPVHSS
Sbjct: 121 ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGNCKFIPQAPPDGPPVHSS 180

Query: 218 KKACVAIYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGY 277
           KKACVAIYPTTVQN ILWFWPNSDPKFKDIILEK+PPFIPELDDPSYVKLEGNRDMAYGY
Sbjct: 181 KKACVAIYPTTVQNDILWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAYGY 240

Query: 278 EILIENLMDPAHVPYAHYKIIPAPPSIKNRYLCQFYLLNSCI 319
           E LIENL+DPAHVPYAHYKIIPAPPSIKNRYLCQFYLLNSC+
Sbjct: 241 ERLIENLLDPAHVPYAHYKIIPAPPSIKNRYLCQFYLLNSCV 280

[Close]

BLAST of CsGy1G028660 vs. NCBI nr
Match: XP_016900972.1 (PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo])

HSP 1 Score: 543 bits (1398), Expect = 8.87e-190
Identity = 253/268 (94.40%), Postives = 260/268 (97.01%), Query Frame = 0


Query: 38  MEVARISSPHLILIPTTVNRTLTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCE 97
           MEVARISSPHLI IPTT NRTLTPNP S+ASNRNP PRSRS  FS+FKT THRNAIRKCE
Sbjct: 1   MEVARISSPHLIHIPTTFNRTLTPNPSSIASNRNPPPRSRS--FSSFKTATHRNAIRKCE 60

Query: 98  LLRTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRN 157
           L+RTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDK+VP+GKKVLGLDLVVWWDRN
Sbjct: 61  LIRTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKRVPVGKKVLGLDLVVWWDRN 120

Query: 158 ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSS 217
           ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSS
Sbjct: 121 ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSS 180

Query: 218 KKACVAIYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGY 277
           KKACVAIYPTTVQN ILWFWPNSDPKFKDIILEK+PPFIPELDDPSYVKLEGNRDMAYGY
Sbjct: 181 KKACVAIYPTTVQNDILWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAYGY 240

Query: 278 EILIENLMDPAHVPYAHYKIIPAPPSIK 305
           EILIENL+DPAHVPYAHYKIIPAPPSIK
Sbjct: 241 EILIENLLDPAHVPYAHYKIIPAPPSIK 266

[Close]

BLAST of CsGy1G028660 vs. ExPASy TrEMBL
Match: A0A0A0LX74 (Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600180 PE=4 SV=1)

HSP 1 Score: 591 bits (1524), Expect = 7.30e-209
Identity = 279/289 (96.54%), Postives = 282/289 (97.58%), Query Frame = 0


Query: 1   MIHFHSYTRLHFNFLTFNNPPILPLPRSAQTRIRFTPMEVARISSPHLILIPTTVNRTLT 60
           MIHFHSYTRLHFNFLTFNNPPILPLPRSAQTRIRFTPMEVARISSPHLILIPTTVNRTLT
Sbjct: 1   MIHFHSYTRLHFNFLTFNNPPILPLPRSAQTRIRFTPMEVARISSPHLILIPTTVNRTLT 60

Query: 61  PNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTAMASDVVTSERPEVEEEKF 120
           PNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTAMASDVVTSERPEVEEEKF
Sbjct: 61  PNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTAMASDVVTSERPEVEEEKF 120

Query: 121 DWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRI 180
           DWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRI
Sbjct: 121 DWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRI 180

Query: 181 DQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFWPNS 240
           DQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFWPNS
Sbjct: 181 DQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFWPNS 240

Query: 241 DPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYG-----YEILIENL 284
           DPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYG      E+++E L
Sbjct: 241 DPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGEGGRPLELVVEKL 289

[Close]

BLAST of CsGy1G028660 vs. ExPASy TrEMBL
Match: A0A5A7UQ27 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00870 PE=4 SV=1)

HSP 1 Score: 570 bits (1469), Expect = 8.67e-205
Identity = 264/282 (93.62%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 38  MEVARISSPHLILIPTTVNRTLTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCE 97
           MEVARISSPHLI IPTT NRTLTPNP S+ASNRNP PRSRS  FS+FKT THRNAIRKCE
Sbjct: 1   MEVARISSPHLIHIPTTFNRTLTPNPSSIASNRNPPPRSRS--FSSFKTATHRNAIRKCE 60

Query: 98  LLRTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRN 157
           L+RTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDK+VP+GKKVLGLDLVVWWDRN
Sbjct: 61  LIRTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKRVPVGKKVLGLDLVVWWDRN 120

Query: 158 ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSS 217
           ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSG+CKFIPQAPPDGPPVHSS
Sbjct: 121 ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGNCKFIPQAPPDGPPVHSS 180

Query: 218 KKACVAIYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGY 277
           KKACVAIYPTTVQN ILWFWPNSDPKFKDIILEK+PPFIPELDDPSYVKLEGNRDMAYGY
Sbjct: 181 KKACVAIYPTTVQNDILWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAYGY 240

Query: 278 EILIENLMDPAHVPYAHYKIIPAPPSIKNRYLCQFYLLNSCI 319
           E LIENL+DPAHVPYAHYKIIPAPPSIKNRYLCQFYLLNSC+
Sbjct: 241 ERLIENLLDPAHVPYAHYKIIPAPPSIKNRYLCQFYLLNSCV 280

[Close]

BLAST of CsGy1G028660 vs. ExPASy TrEMBL
Match: A0A1S4DYB5 (LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492541 PE=4 SV=1)

HSP 1 Score: 543 bits (1398), Expect = 4.29e-190
Identity = 253/268 (94.40%), Postives = 260/268 (97.01%), Query Frame = 0


Query: 38  MEVARISSPHLILIPTTVNRTLTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCE 97
           MEVARISSPHLI IPTT NRTLTPNP S+ASNRNP PRSRS  FS+FKT THRNAIRKCE
Sbjct: 1   MEVARISSPHLIHIPTTFNRTLTPNPSSIASNRNPPPRSRS--FSSFKTATHRNAIRKCE 60

Query: 98  LLRTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRN 157
           L+RTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDK+VP+GKKVLGLDLVVWWDRN
Sbjct: 61  LIRTAMASDVVTSERPEVEEEKFDWFAEWYPVMPVCDLDKRVPVGKKVLGLDLVVWWDRN 120

Query: 158 ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSS 217
           ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSS
Sbjct: 121 ENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSS 180

Query: 218 KKACVAIYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGY 277
           KKACVAIYPTTVQN ILWFWPNSDPKFKDIILEK+PPFIPELDDPSYVKLEGNRDMAYGY
Sbjct: 181 KKACVAIYPTTVQNDILWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAYGY 240

Query: 278 EILIENLMDPAHVPYAHYKIIPAPPSIK 305
           EILIENL+DPAHVPYAHYKIIPAPPSIK
Sbjct: 241 EILIENLLDPAHVPYAHYKIIPAPPSIK 266

[Close]

BLAST of CsGy1G028660 vs. ExPASy TrEMBL
Match: A0A6J1HD38 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461739 PE=4 SV=1)

HSP 1 Score: 498 bits (1282), Expect = 3.00e-172
Identity = 231/272 (84.93%), Postives = 251/272 (92.28%), Query Frame = 0


Query: 38  MEVARISSPHLILIPTTVNRTLTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCE 97
           MEVA ISS  LI  PTT++RTL  N   +AS+RNPLPR RS SF NFKT THRN +RKCE
Sbjct: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSF-NFKTVTHRNVLRKCE 60

Query: 98  LLRTAMASDVVTSERPEVEEEK--FDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWD 157
           L+RTA+ASDVV +++PE+EEEK  FDWFAEWYPVM VCDLDK+VPI KKVLGLDLVVWWD
Sbjct: 61  LIRTALASDVVGTDQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWD 120

Query: 158 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 217
           RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH
Sbjct: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 180

Query: 218 SSKKACVAIYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAY 277
           SSKKACVA+YP+TVQNGI+WFWPNSDPKFKD+I+EK+PPFIPELDDPSYVKLEGNRDMAY
Sbjct: 181 SSKKACVAVYPSTVQNGIVWFWPNSDPKFKDVIMEKKPPFIPELDDPSYVKLEGNRDMAY 240

Query: 278 GYEILIENLMDPAHVPYAHYKIIPAPPSIKNR 307
           GYEILIENLMDPAHVPYAHY+II APPS+KNR
Sbjct: 241 GYEILIENLMDPAHVPYAHYRIIQAPPSLKNR 271

[Close]

BLAST of CsGy1G028660 vs. ExPASy TrEMBL
Match: A0A6J1HB02 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461739 PE=4 SV=1)

HSP 1 Score: 498 bits (1282), Expect = 3.21e-172
Identity = 231/272 (84.93%), Postives = 251/272 (92.28%), Query Frame = 0


Query: 38  MEVARISSPHLILIPTTVNRTLTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCE 97
           MEVA ISS  LI  PTT++RTL  N   +AS+RNPLPR RS SF NFKT THRN +RKCE
Sbjct: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSF-NFKTVTHRNVLRKCE 60

Query: 98  LLRTAMASDVVTSERPEVEEEK--FDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWD 157
           L+RTA+ASDVV +++PE+EEEK  FDWFAEWYPVM VCDLDK+VPI KKVLGLDLVVWWD
Sbjct: 61  LIRTALASDVVGTDQPEMEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWWD 120

Query: 158 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 217
           RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH
Sbjct: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 180

Query: 218 SSKKACVAIYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAY 277
           SSKKACVA+YP+TVQNGI+WFWPNSDPKFKD+I+EK+PPFIPELDDPSYVKLEGNRDMAY
Sbjct: 181 SSKKACVAVYPSTVQNGIVWFWPNSDPKFKDVIMEKKPPFIPELDDPSYVKLEGNRDMAY 240

Query: 278 GYEILIENLMDPAHVPYAHYKIIPAPPSIKNR 307
           GYEILIENLMDPAHVPYAHY+II APPS+KNR
Sbjct: 241 GYEILIENLMDPAHVPYAHYRIIQAPPSLKNR 271

[Close]

BLAST of CsGy1G028660 vs. TAIR 10
Match: AT4G25650.2 (ACD1-like )

HSP 1 Score: 359.4 bits (921), Expect = 3.0e-99
Identity = 166/262 (63.36%), Postives = 199/262 (75.95%), Query Frame = 0


Query: 71  NPLPRSRSRSFSNFKTPTHRNAI--RKCELLRTAMASD------VVTSERPEVE------ 130
           N  PR R  SFSN   P   N++  RK     TA++S         T+  PE E      
Sbjct: 17  NTKPRFRC-SFSNPSLPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPG 76

Query: 131 EEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLS 190
            +KFDW+A WYPVMP+CDLDKKVP GKKV+G+DLVVWWDRNE  WKV DD+CPHRLAPLS
Sbjct: 77  SDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLS 136

Query: 191 EGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWF 250
           +GRIDQWGRLQCVYHGWCFNGSGDCK IPQAPPDGPPVH+ K+ACVA+YP+TVQ+ I+WF
Sbjct: 137 DGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWF 196

Query: 251 WPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYK 310
           WPNSDPK+K+II   +PP+IPEL+DPS+ KL GNRD+ YGY++L+ENLMDPAHVPYAHY 
Sbjct: 197 WPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYG 256

Query: 311 IIPAPPSIKNRYLCQFYLLNSC 319
           ++  P   K +Y+    + NSC
Sbjct: 257 LMRFPKP-KGKYI--ICISNSC 274

[Close]

BLAST of CsGy1G028660 vs. TAIR 10
Match: AT4G25650.1 (ACD1-like )

HSP 1 Score: 356.7 bits (914), Expect = 2.0e-98
Identity = 161/245 (65.71%), Postives = 191/245 (77.96%), Query Frame = 0


Query: 71  NPLPRSRSRSFSNFKTPTHRNAI--RKCELLRTAMASD------VVTSERPEVE------ 130
           N  PR R  SFSN   P   N++  RK     TA++S         T+  PE E      
Sbjct: 17  NTKPRFRC-SFSNPSLPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPG 76

Query: 131 EEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLS 190
            +KFDW+A WYPVMP+CDLDKKVP GKKV+G+DLVVWWDRNE  WKV DD+CPHRLAPLS
Sbjct: 77  SDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLS 136

Query: 191 EGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWF 250
           +GRIDQWGRLQCVYHGWCFNGSGDCK IPQAPPDGPPVH+ K+ACVA+YP+TVQ+ I+WF
Sbjct: 137 DGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWF 196

Query: 251 WPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYK 302
           WPNSDPK+K+II   +PP+IPEL+DPS+ KL GNRD+ YGY++L+ENLMDPAHVPYAHY 
Sbjct: 197 WPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYG 256

[Close]

BLAST of CsGy1G028660 vs. TAIR 10
Match: AT3G44880.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 195.3 bits (495), Expect = 7.6e-50
Identity = 98/215 (45.58%), Postives = 126/215 (58.60%), Query Frame = 0


Query: 99  LRTAMASDVVTSERPE---VEEE----------KFDWFAEWYPVMPVCDLDKKVPIGKKV 158
           LR A    V TS+  E   +EEE          +F W   WYPV  V DLD  VP   ++
Sbjct: 48  LRVAAPPSVPTSDSTEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQL 107

Query: 159 LGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIP 218
           LG DLV+W+DRN+  W  FDD CPHRLAPLSEGR+D+ G LQC YHGW F G G C  IP
Sbjct: 108 LGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIP 167

Query: 219 QAPPDGPPVHS--SKKACVAIYPTTVQNGILWFWPNSDPKFKDIILEKEPPFIP-ELDDP 278
           QA   GP   +  S +AC   +PT V  G+L+ WP  D    D     EPP +P + D P
Sbjct: 168 QAATSGPEARAVKSPRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKP 227

Query: 279 SYVKLEGNRDMAYGYEILIENLMDPAHVPYAHYKI 298
            +  +   RD+ YGY+ L+EN+ DP+H+ +AH+K+
Sbjct: 228 EFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKV 260

[Close]

BLAST of CsGy1G028660 vs. TAIR 10
Match: AT2G24820.1 (translocon at the inner envelope membrane of chloroplasts 55-II )

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-32
Identity = 81/245 (33.06%), Postives = 120/245 (48.98%), Query Frame = 0


Query: 59  LTPNPYSLASNRNPLPRSRS-RSFSNFKTPTHRNAIRKCELLRTAMA------SDVVTS- 118
           LTP    L +   P P   + RS     T      +R+  +  TA++       DV+ + 
Sbjct: 12  LTPTSPILFTKVTPTPIIHNHRSTCTIPTKPRLRLLRRSAVAGTAVSDQTEGGGDVLLNP 71

Query: 119 -ERPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCP 178
            E   VE   +DW  EWYP+    ++ +  P+G  V    +V++ D  E   + ++D CP
Sbjct: 72  EEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEGTLRCYEDRCP 131

Query: 179 HRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTV 238
           HRLA LSEG++   GRL+C+YHGW F G G C  IPQ P         K ACV  Y    
Sbjct: 132 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAS---AKIPKAACVKTYEVKD 191

Query: 239 QNGILWFWPNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAH 295
             G++W W ++    K     ++ P+      P +  +    ++ Y + IL+ENLMDPAH
Sbjct: 192 SQGVVWVWMST----KTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAH 247

[Close]

BLAST of CsGy1G028660 vs. TAIR 10
Match: AT1G44446.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 90.9 bits (224), Expect = 2.0e-18
Identity = 54/183 (29.51%), Postives = 79/183 (43.17%), Query Frame = 0


Query: 126 WYPVMPVCDL--DKKVPIGKKVLGLDLVVWWDRNENAWKVF----------DDSCPHRLA 185
           WYPV    DL  D  VPI             +  E  W +F           ++C HR  
Sbjct: 221 WYPVAFTADLKHDTMVPI-------------ECFEQPWVIFRGEDGKPGCVRNTCAHRAC 280

Query: 186 PLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGI 245
           PL  G +++ GR+QC YHGW ++  G+CK +P             K  +   P   Q G+
Sbjct: 281 PLDLGTVNE-GRIQCPYHGWEYSTDGECKKMPST--------KLLKVKIKSLPCLEQEGM 340

Query: 246 LWFWPNSDPKFKDIILEKEPPFIPELDDPS--YVKLEGNRDMAYGYEILIENLMDPAHVP 295
           +W WP  +P           P +P L  PS   +  E   D+   + +L++NL+D AH P
Sbjct: 341 IWIWPGDEP---------PAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNLLDLAHAP 372

The following BLAST results are available for this feature:

BLAST of CsGy1G028660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W496	4.3e-98	63.36	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop...	[more]
Q9FYC2	1.1e-48	45.58	Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO P...	[more]
Q0DV66	4.1e-48	48.37	Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9SK50	2.0e-31	33.06	Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1	[more]
O49931	2.6e-31	32.12	Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1	[more]

BLAST of CsGy1G028660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741408.1	2.08e-234	100.00	protochlorophyllide-dependent translocon component 52, chloroplastic isoform X2 ...	[more]
XP_011660064.1	2.17e-233	100.00	protochlorophyllide-dependent translocon component 52, chloroplastic isoform X1 ...	[more]
KAE8653476.1	3.15e-219	100.00	hypothetical protein Csa_007178 [Cucumis sativus]	[more]
KAA0055705.1	1.79e-204	93.62	protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa]	[more]
XP_016900972.1	8.87e-190	94.40	PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon compone...	[more]

BLAST of CsGy1G028660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX74	7.30e-209	96.54	Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600180 PE=4...	[more]
A0A5A7UQ27	8.67e-205	93.62	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A1S4DYB5	4.29e-190	94.40	LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon component 52, chlo...	[more]
A0A6J1HD38	3.00e-172	84.93	protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor...	[more]
A0A6J1HB02	3.21e-172	84.93	protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor...	[more]

BLAST of CsGy1G028660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25650.2	3.0e-99	63.36	ACD1-like	[more]
AT4G25650.1	2.0e-98	65.71	ACD1-like	[more]
AT3G44880.1	7.6e-50	45.58	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]
AT2G24820.1	1.4e-32	33.06	translocon at the inner envelope membrane of chloroplasts 55-II	[more]
AT1G44446.1	2.0e-18	29.51	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 121..262 e-value: 1.9E-37 score: 129.9
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 105..242
None	No IPR available	GENE3D	3.90.380.10		coord: 263..309 e-value: 2.3E-6 score: 29.5
None	No IPR available	PANTHER	PTHR21266:SF32	NEVERLAND	coord: 106..297
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 106..297
None	No IPR available	CDD	cd03480	Rieske_RO_Alpha_PaO	coord: 109..247 e-value: 2.76483E-84 score: 248.391
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 231..299
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 125..209 e-value: 1.5E-18 score: 66.5
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 126..236 score: 28.162342

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G028660.1	CsGy1G028660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031967	organelle envelope
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0046872	metal ion binding