CsGy1G026020 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G026020
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ribosome biogenesis protein BRX1-like
Location	Gy14Chr1: 24716826 .. 24721677 (+)
RNA-Seq Expression	CsGy1G026020
Synteny	CsGy1G026020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTACTACTCTAAGAGGTGAATATATCTATATTCATATATTACCCACAAACTTTTTTCCTTTCCTTTGTTTTGAGCCTTTGGAAGAGAATGGGCCGAGGAAGAGTGGATGGCGGGTTTTATCGTCAAACTAGGGTTTAAGATTTTTGACTTTTGAAGAAAAGAAAATCACTCTGCCGCTCTCCCTCTCTTTCTGATCACCACTCTCCTCCTCTTCATCCGCCGATCATCCGGAAAGCTTTCGAGTTCTCTTCCTTGATCTTTTCCACTCAATCTCGGTTTCTCTTCCCCTCACCGCTCGCCGGGTAGACGGGTAAGAATCATCTTTTCAGTTTAAGTCACATTGACAATAGCTTGTAGAGTTATAGTATGTAAGTTTGAACATATTTGAACATGACCCAGCTAGGAATTAAGCTTTTTCAATATAAATTACTTGGTAAAGATTCGGTTTATTAATTTCCAAACTCGTTTTTAGTGCGGTTGGTTAGACTTTGGGCTTTGAATTTTTCCCTTTTGTGATTTTGAGATAATTTTGGACGAATTGACATTGAAGCTTAAGACTGAGTGAACATGGCTATGTAATAGCATTTTAATCGAGTTAAGTAATTTTGGTCAAAGTTATTAGTTATGAAAAATTGTTTCAGGTCGGCTAGGGACTTTTAAGTTGTGTCAAACTCTAATAAAGTAACTTAACTACCAATTTGCCTTAAGTGCCGGGTTGTTGGGATTTGTTTGCTGTAATTTGTCTAGGGTTATTCGTGTTTGTGATGTGTTGTTAGTGAGTATGTTGAATTTTGTGTTCGAGCTTCCAGATGTGAAGTATATAAAATGTTATTTGTAATTGTTTTAAACTTGAAACGCCTTTGATATTTGTTATTCTCTTGTGTCATACGATTACGTTTCAGGACATCTACTGATTAAATCATGAGACCTCATGCATACGTGTATACGCATAGTTATTATATATAAAAGTTATGATTTTGGTAACCATCATCATGGGTAAAGTTTCAGCAGTGGTTTACATGACACCAAGAGTTAAGATTAAAGAGGAAACGAGTGAGTTGTACACTTATAGAATGGTATTACTTTGGTTTAAGGACTTGTGAATGATCTATATGTTTTCTTTGTAAAGTTTTAAGATTTAATTTTTTTTATTGCGTATTTTAATGATTTTGGTATCCCATATAAAGATTCATTTCTATTGAGTCTTTGAGTGTTTTCTGTATGCGTGAAGTAACAATCCTGTTTAGAACGTGTCTTTGAAGTTAGGTTGCTTCACTCCTCTCTTCATCCTTTACAGATTCCCTTAATCTATGTTTCTTAATTTAAGTGTAGTATTTCTGAAGGTGATATTCTCAAATGGCAAAGAAGAGGAAGCATAGTGAGTCTTTGCCGACGGTATCGGTTAAGAAGGACGATGATGCTCCGGAGAGACCTAAGCGGACACTTATGGGCTGGAAAGACAAAAAAGTGACAAAAGAGAGTGAAGTTGGTTCTGATCATGCTGTTTTTCGAAATAAAGAAAAGGTTCTCGTCACGTGTTCCCGTCGAATCAATTTTAGGTATGTAATATAGTTGAAACAAGTTGTTGTAGCTTTTTGTAAAATACATTGTTAGGTCTGTACATGGTTAGGTAGTTTGCAGTGTACTTATCACTCATTCACCAAATGTTTTTTGTTTTTCTTCCCTTTAGAATTTTTGGCAATTTAACTTGTGATTGATTAGGTATCGGCATTTGATGTTGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCCAGCCTATTTTTCGAGGTTAGAACCTTTCCATTACACTGTTGTAATCTGGAATTTTTAAGGTACAATGTTTTCTAATTTTTATTTTTTATTAGATATAGGATGATAACATTTTGGTTTTATTCTCGTGGTGTATAACTTATAAGGATGTTTTGACTATCCTTTTGCTTTTCATTATATTACTTTCCTATATGGCCTTCTCATCATGTTTGTACATTGCGATCATATTTTTCCACTCACTGTTCTTTTTTTCTCTAATTCCAGTGCAGAAAACATAAAGATCTTTATCTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGGTAATTTTAACTTGTATTCAAATTTTATTACTGGGTTACTAAAATTTTATTTGATTTCTTTATTAAATGAAGTTTTCTTACTTGTCCATTTTTTTTGCTTTCAGTGCATACAATGGAAGAATTGAAGCTTACAGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTGGAAACTACTGAAGGAAATGATTATTCAGGTACCAATGGCAAAGTTTTGTCTTTAACAATTAATTTTTGAATGTTGAAATGATTTTTCATTCTTACTCGTGGATCAATGTATGAGGCAAATGTCAGTTTCCTTGTCTTTCTTCATAAAATGCATTTTTTGCTCATTTCCTTGCTCCTTCAATCCAAAGCAAACATCATATTGAATTGATAAAATAGTCTGCATGACTGTAGTCGAAGTAGCTTCTTTCAGTTTTTTCTTATGGAAAGAAAAATTAAAGACATTCATAATGCACTTCTTTCATGTAATATCATGGCATAAGAATATGGTTAATGAATACTTGTGCTCATTCTAAAATGCCGGTGCCTCCCACTATTATTCTCTTTTCATGCTGCCTTTATTAATTCCTGATTTCACATATGCATATTTACTATGTTGTGAAAAGTATGTAGATCTTTGCTGCTTCTCCAAATAATGGCATTTTTTAAAACGATTGCTTTTAACTCTTGTTTTACATGACATACTTTTATCTCACCAATGTGTTTTTCTCTCAGATTTTTGGAACTCCTAAGGAGCATCGACATTCTAAACCGTACCATGATCATGTATTTGTTTTCTCTATTGTTGATGACCATATCTGGTTCCGGAATTACCAGGTATGCTTTATTTATTTCCTACTTGCTACAGAATTTAATACTAACCATGATCATGCTTTATTTATAACCATCACTGCGTTAGCAACACCACCTGAGGAACAATGCGTGTCTTTAGTGAAGTATGTTAAGGTATATATGGATAAATGTCAGAAGTGTCGTCCTTAAGATATGAGGCGTACAATCGTCATTAGGAAAGGAATTCAGCATGGCAAAAAATTAATTGATTTGAAGAGTTTGAGATTAAGCAGATTTTGGGGAATAGTTTTTAGGAGTCCTAGTTGGGGATCTTGCTATTTTTCTTTCTTATGTCAATGATTTCATTGTTTTTCTAGTTCACTGTATACATTTCCATATAATTGATTGTTATCCTTTAAACTTACATGTTCAATTTTCCATCAACTGTTGGTATCTTTGTTCTTGTTTGAGATTTGTGTGGGTGTGACCTATTCCCCAACCCATTATTTAATGATATGGTGCTTGTCTTCTTTGTTTGGTGTGATCAGATATCTGTTCCACATAATGAATCAGATAAAGTGGCTCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTATTCAAATTCCACTTCCTGTTTAGTTTATAAGTGGGTTTTCACAATTTTTTTCACGGACTTCAAATAATTGCATTTTACAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCTACCCTATATGAGAACCCACTTTATGTATCGCCAAACCAGGTTAGATTGATTGTCCAACTTTTTGATCATTTGGGATTACACTTCTTCACACTATTCTTTTAAATTTGGGTTATAAAAACAGCTGAAAATTTACATTTGCATTAGTTATATCCAAAAGAAAACTACGATCTGGGTTCTTTTCTATAGATTGCTCAACTATGTTCTTGAATTCTAAAATAAAGAAGAGAAAACCATATGCTGAGGACACATTAGCTATGTTTTTCCAGTTTCTTTTAAGTTCATATTTGACCATAGATTAAAGTATTGGAATTACGCAAAGCCCAAATAATCACTATCTTTTTCAATTCAAGGTTATTTGTGATTCCAACTATAGTCTCACTAATCGTATGACCAACTAGAAGTTTTTTTTGTAATCCTCTGGATTGGATGTCATATTTTGTTAACTTTGTCGATGTTATTCATGTCATTTTGTAGATTCGAGCATTGGAGAAGAAACAGAAGGCTGGTAAATACTCAAAGAAAGTCAAAGCGAAAACGAGGAGGAAGATGCACGAGTTATCGAATCCATTGGAACCTGACGAGTTTGCTGATATGTGGAAGGAACAGTAGTATTTCAATAGACTTAATTTAAGCCAAGACTCGATCATAATTCCTTGCCTCTTGAAATGGGATTTTTGTTCTATAATACTAGCAAGTGTAATGCAAATTTTGTCCTGGTTTATTTAAACCTTGAGGTGTATGTTTCTCTATCTTCAATGTATCTCTTAGTCCAATACTTGGGAGTTTAGATATGCTTTTACAAGATCAAAGGGCATCTCATATGTTTTACTTTCTGTTACCAAAAAATAGTTCCGAACGAAAACGCATATAAGATCATTTAATTTTTATGATTTTGTCTACTTAAAGAAAAAAAGCGATTATGCAAACGAGCATTGATTTATAGGTAATTCTTACTTTTAGGACTAAAATTTCTTCTCTATTTACTTTTGTAATTGCACACTGAAAAATGAATAATCATACAGTATTGAGCATTGATTTGGTTCTAATCATATACTCATCTGTACAAATTTTGTTTTAATCGACCGCTCACC

mRNA sequence

CTTTACTACTCTAAGAGGTGAATATATCTATATTCATATATTACCCACAAACTTTTTTCCTTTCCTTTGTTTTGAGCCTTTGGAAGAGAATGGGCCGAGGAAGAGTGGATGGCGGGTTTTATCGTCAAACTAGGGTTTAAGATTTTTGACTTTTGAAGAAAAGAAAATCACTCTGCCGCTCTCCCTCTCTTTCTGATCACCACTCTCCTCCTCTTCATCCGCCGATCATCCGGAAAGCTTTCGAGTTCTCTTCCTTGATCTTTTCCACTCAATCTCGGTTTCTCTTCCCCTCACCGCTCGCCGGGTAGACGGTATTTCTGAAGGTGATATTCTCAAATGGCAAAGAAGAGGAAGCATAGTGAGTCTTTGCCGACGGTATCGGTTAAGAAGGACGATGATGCTCCGGAGAGACCTAAGCGGACACTTATGGGCTGGAAAGACAAAAAAGTGACAAAAGAGAGTGAAGTTGGTTCTGATCATGCTGTTTTTCGAAATAAAGAAAAGGTTCTCGTCACGTGTTCCCGTCGAATCAATTTTAGGTATCGGCATTTGATGTTGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCCAGCCTATTTTTCGAGTGCAGAAAACATAAAGATCTTTATCTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGTGCATACAATGGAAGAATTGAAGCTTACAGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTGGAAACTACTGAAGGAAATGATTATTCAGATTTTTGGAACTCCTAAGGAGCATCGACATTCTAAACCGTACCATGATCATGTATTTGTTTTCTCTATTGTTGATGACCATATCTGGTTCCGGAATTACCAGATATCTGTTCCACATAATGAATCAGATAAAGTGGCTCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCTACCCTATATGAGAACCCACTTTATGTATCGCCAAACCAGATTCGAGCATTGGAGAAGAAACAGAAGGCTGGTAAATACTCAAAGAAAGTCAAAGCGAAAACGAGGAGGAAGATGCACGAGTTATCGAATCCATTGGAACCTGACGAGTTTGCTGATATGTGGAAGGAACAGTAGTATTTCAATAGACTTAATTTAAGCCAAGACTCGATCATAATTCCTTGCCTCTTGAAATGGGATTTTTGTTCTATAATACTAGCAAGTGTAATGCAAATTTTGTCCTGGTTTATTTAAACCTTGAGGTGTATGTTTCTCTATCTTCAATGTATCTCTTAGTCCAATACTTGGGAGTTTAGATATGCTTTTACAAGATCAAAGGGCATCTCATATGTTTTACTTTCTGTTACCAAAAAATAGTTCCGAACGAAAACGCATATAAGATCATTTAATTTTTATGATTTTGTCTACTTAAAGAAAAAAAGCGATTATGCAAACGAGCATTGATTTATAGGTAATTCTTACTTTTAGGACTAAAATTTCTTCTCTATTTACTTTTGTAATTGCACACTGAAAAATGAATAATCATACAGTATTGAGCATTGATTTGGTTCTAATCATATACTCATCTGTACAAATTTTGTTTTAATCGACCGCTCACC

Coding sequence (CDS)

ATGGCAAAGAAGAGGAAGCATAGTGAGTCTTTGCCGACGGTATCGGTTAAGAAGGACGATGATGCTCCGGAGAGACCTAAGCGGACACTTATGGGCTGGAAAGACAAAAAAGTGACAAAAGAGAGTGAAGTTGGTTCTGATCATGCTGTTTTTCGAAATAAAGAAAAGGTTCTCGTCACGTGTTCCCGTCGAATCAATTTTAGGTATCGGCATTTGATGTTGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCCAGCCTATTTTTCGAGTGCAGAAAACATAAAGATCTTTATCTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGTGCATACAATGGAAGAATTGAAGCTTACAGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTGGAAACTACTGAAGGAAATGATTATTCAGATTTTTGGAACTCCTAAGGAGCATCGACATTCTAAACCGTACCATGATCATGTATTTGTTTTCTCTATTGTTGATGACCATATCTGGTTCCGGAATTACCAGATATCTGTTCCACATAATGAATCAGATAAAGTGGCTCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCTACCCTATATGAGAACCCACTTTATGTATCGCCAAACCAGATTCGAGCATTGGAGAAGAAACAGAAGGCTGGTAAATACTCAAAGAAAGTCAAAGCGAAAACGAGGAGGAAGATGCACGAGTTATCGAATCCATTGGAACCTGACGAGTTTGCTGATATGTGGAAGGAACAGTAG

Protein sequence

MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKEQ*

Homology

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BLAST of CsGy1G026020 vs. ExPASy Swiss-Prot
Match: Q9LE16 (Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-1 PE=2 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 4.2e-154
Identity = 259/317 (81.70%), Postives = 284/317 (89.59%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           M +KRKHSE++    VK  D APERP+RTL+GWKDKK   E+   +  +VFRNKEKVLVT
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLNMVSLLPHCKKD+KVE++SS+GATLNEL+ELKG SS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180
           DLY+WM K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D HWKLLKEM
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLKEM 180

Query: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240
           + QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDK+ARG LDKMTLIE
Sbjct: 181 LTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGDLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKEQ 318
           LSNPLEPDEF DMW ++
Sbjct: 301 LSNPLEPDEFTDMWNDE 315

[Close]

BLAST of CsGy1G026020 vs. ExPASy Swiss-Prot
Match: Q9C928 (Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-2 PE=2 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 1.3e-150
Identity = 254/318 (79.87%), Postives = 284/318 (89.31%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDD-APERPKRTLMGWKDKKVTK-ESEVGSDHAVFRNKEKVL 60
           M +KRKHSE+     VKK D+ AP+RPKRTL+GWKDK   + E       + F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRI+FRYR LMLN+VSLLPHCKKD+KVE++SSKGATLNEL+ELK  +S LFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLY+WM K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD HWKLLK
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLLK 180

Query: 181 EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240
           EM+ Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQISVPHNESDK+A+GGLDKMTL
Sbjct: 181 EMLTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAKGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+KAKTR+KM
Sbjct: 241 IEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKIKAKTRKKM 300

Query: 301 HELSNPLEPDEFADMWKE 317
           HELSNPLEPDEFADMWK+
Sbjct: 301 HELSNPLEPDEFADMWKD 318

[Close]

BLAST of CsGy1G026020 vs. ExPASy Swiss-Prot
Match: Q3SZZ0 (Ribosome biogenesis protein BRX1 homolog OS=Bos taurus OX=9913 GN=BRIX1 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.3e-66
Identity = 130/266 (48.87%), Postives = 177/266 (66.54%), Query Frame = 0


Query: 51  FRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSS 110
           ++NKE++L+  SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+ 
Sbjct: 56  WKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNK 115

Query: 111 SLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDK 170
            ++FE +K +DLY+W++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD+
Sbjct: 116 CIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDE 175

Query: 171 DVHWKLLKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVAR 230
             H+ LLKE++IQIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D    
Sbjct: 176 LPHYALLKELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---- 235

Query: 231 GGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKV 290
                  L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +K 
Sbjct: 236 -----AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAKYREKQ 295

Query: 291 KAKTRRKMH--ELSNPLEPDEFADMW 315
           + K  +K+   E    L  D  AD++
Sbjct: 296 QVKDVQKLRKKEPKTILPHDPTADVF 307

[Close]

BLAST of CsGy1G026020 vs. ExPASy Swiss-Prot
Match: Q8TDN6 (Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens OX=9606 GN=BRIX1 PE=1 SV=2)

HSP 1 Score: 253.4 bits (646), Expect = 3.3e-66
Identity = 130/266 (48.87%), Postives = 177/266 (66.54%), Query Frame = 0


Query: 51  FRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSS 110
           ++NKE++L+  SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+ 
Sbjct: 56  WKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNK 115

Query: 111 SLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDK 170
            ++FE +K +DLY+W++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD+
Sbjct: 116 CIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDE 175

Query: 171 DVHWKLLKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVAR 230
             H+ LLKE++IQIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D    
Sbjct: 176 LPHYALLKELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---- 235

Query: 231 GGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKV 290
                  L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +K 
Sbjct: 236 -----AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAKYREKQ 295

Query: 291 KAKTRRKMH--ELSNPLEPDEFADMW 315
           + K  +K+   E    L  D  AD++
Sbjct: 296 QVKDVQKLRKKEPKTLLPHDPTADVF 307

[Close]

BLAST of CsGy1G026020 vs. ExPASy Swiss-Prot
Match: Q4QQT6 (Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus OX=10116 GN=Brix1 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 7.3e-66
Identity = 136/290 (46.90%), Postives = 181/290 (62.41%), Query Frame = 0


Query: 34  KDKKVTKESEVGSDH-------AVFRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKD 93
           K   V KE+E   D          ++NKE++L+  SR INFR RHLM ++  L+PH K D
Sbjct: 31  KQADVAKEAEEEKDRIPGPVCKGKWKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKAD 90

Query: 94  NKVESRSSKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTME 153
            K++ R  K   +NE+ E+K C+  ++FE +K +DLY+W++  P GPS KFLV  +HT+ 
Sbjct: 91  TKMD-RKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLA 150

Query: 154 ELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEMIIQIFGTPKEHRHSKPYHDHVFVFSI 213
           ELK+TGN LKGSRP+L+F   FD   H+ LLKE +IQIF TP+ H  S+P+ DHVF F+I
Sbjct: 151 ELKMTGNCLKGSRPLLSFDPAFDDLPHYALLKEFLIQIFSTPRYHPKSQPFVDHVFTFTI 210

Query: 214 VDDHIWFRNYQISVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENP 273
           +D+ IWFRN+QI     E D           L+E+GPRF LN IKIF GSFGGPTLYENP
Sbjct: 211 LDNRIWFRNFQII----EED---------AALVEIGPRFVLNLIKIFQGSFGGPTLYENP 270

Query: 274 LYVSPNQIRALEKKQKAGKYSKK--VKAKTRRKMHELSNPLEPDEFADMW 315
            Y SPN  R + +   A KY +K  VK   + +  E    L  D  AD++
Sbjct: 271 HYQSPNMHRRVVRSITAAKYREKQQVKDVQKSRKKEPKTILPHDPTADVF 306

[Close]

BLAST of CsGy1G026020 vs. NCBI nr
Match: XP_011659901.2 (ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus] >XP_031743378.1 ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus] >XP_031743380.1 ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus])

HSP 1 Score: 645 bits (1664), Expect = 1.23e-233
Identity = 315/317 (99.37%), Postives = 316/317 (99.68%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180
           DLYL MAKCPSGPSVKFLVNA+HTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM
Sbjct: 121 DLYLCMAKCPSGPSVKFLVNAMHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240
           IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKEQ 317
           LSNPLEPDEFADMWKEQ
Sbjct: 301 LSNPLEPDEFADMWKEQ 317

[Close]

BLAST of CsGy1G026020 vs. NCBI nr
Match: XP_008450669.1 (PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450670.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450671.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >TYK10224.1 ribosome biogenesis protein BRX1-like [Cucumis melo var. makuwa])

HSP 1 Score: 635 bits (1638), Expect = 1.09e-229
Identity = 308/316 (97.47%), Postives = 314/316 (99.37%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+SE GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240
           IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 316
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of CsGy1G026020 vs. NCBI nr
Match: XP_038879963.1 (ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida] >XP_038879964.1 ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida] >XP_038879966.1 ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida])

HSP 1 Score: 624 bits (1610), Expect = 2.03e-225
Identity = 301/316 (95.25%), Postives = 309/316 (97.78%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRK SE+LPTVS KKD++APERPKRTLMGWKD++V KE E GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKRSETLPTVSTKKDENAPERPKRTLMGWKDREVAKECEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLK SRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKSSRPILTFSSNFDKDVHWKLLKEI 180

Query: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240
           I+QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAK RRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKMRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 316
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of CsGy1G026020 vs. NCBI nr
Match: XP_038894805.1 (ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida])

HSP 1 Score: 624 bits (1609), Expect = 2.88e-225
Identity = 301/316 (95.25%), Postives = 310/316 (98.10%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           M KKRKHSE+LP  SVKKDD A ERPKRTLMGWKDK+V+KES+ GSDHA+FRNKEKVLVT
Sbjct: 1   MVKKRKHSETLPAESVKKDDAALERPKRTLMGWKDKEVSKESDSGSDHAIFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180

Query: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240
           I+QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 316
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of CsGy1G026020 vs. NCBI nr
Match: KAG7037539.1 (Ribosome biogenesis protein BRX1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 623 bits (1607), Expect = 5.81e-225
Identity = 300/316 (94.94%), Postives = 309/316 (97.78%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           M KKRKHSE+LP VSVKKD+ APERPKRTL GWKDK+V KE+E GSDHAVFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240
           I+QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 316
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of CsGy1G026020 vs. ExPASy TrEMBL
Match: A0A1S3BQS3 (ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE=3 SV=1)

HSP 1 Score: 635 bits (1638), Expect = 5.29e-230
Identity = 308/316 (97.47%), Postives = 314/316 (99.37%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+SE GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240
           IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 316
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of CsGy1G026020 vs. ExPASy TrEMBL
Match: A0A5D3CG95 (Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003710 PE=3 SV=1)

HSP 1 Score: 635 bits (1638), Expect = 5.29e-230
Identity = 308/316 (97.47%), Postives = 314/316 (99.37%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+SE GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240
           IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 316
           LSNPLEPDEFADMWKE
Sbjct: 301 LSNPLEPDEFADMWKE 316

[Close]

BLAST of CsGy1G026020 vs. ExPASy TrEMBL
Match: A0A6J1E0T2 (ribosome biogenesis protein BRX1 homolog 1-like OS=Momordica charantia OX=3673 GN=LOC111026105 PE=3 SV=1)

HSP 1 Score: 623 bits (1607), Expect = 2.92e-225
Identity = 303/317 (95.58%), Postives = 311/317 (98.11%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           MAKKRKHSE+L +V+VKKD DAPERPKRTLMGWKDK+V KESE GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNES-DKVARGGLDKMTLI 240
           I+QIFG PKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNES DKVARGGLDK+TLI
Sbjct: 181 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 240

Query: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMH 300
           EVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQIRALEKKQKAGKYSKKVKAKTRRKMH
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQIRALEKKQKAGKYSKKVKAKTRRKMH 300

Query: 301 ELSNPLEPDEFADMWKE 316
           ELSNPLEPDEFADMWKE
Sbjct: 301 ELSNPLEPDEFADMWKE 317

[Close]

BLAST of CsGy1G026020 vs. ExPASy TrEMBL
Match: A0A6J1EW75 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437121 PE=3 SV=1)

HSP 1 Score: 620 bits (1599), Expect = 4.66e-224
Identity = 299/316 (94.62%), Postives = 308/316 (97.47%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           M KKRKHSE+LP VSVKKD+ APERPKRTL GWKDK+V KE+E GSDHAVFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240
           I+QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKE 316
           LSNPLE DEFADMWKE
Sbjct: 301 LSNPLEQDEFADMWKE 316

[Close]

BLAST of CsGy1G026020 vs. ExPASy TrEMBL
Match: A0A6J1HZ18 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467904 PE=3 SV=1)

HSP 1 Score: 616 bits (1589), Expect = 1.45e-222
Identity = 298/314 (94.90%), Postives = 305/314 (97.13%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           M KKRKHSE+LP VSVKKDD APER KRTL GWKDK+VT +SE  SDHAVFRNKEKVLVT
Sbjct: 1   MVKKRKHSETLPAVSVKKDDVAPERSKRTLTGWKDKEVTTKSESDSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRS+KGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD HWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDAHWKLLKEI 180

Query: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240
           I+QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTLIE
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMW 314
           LSNPLEPDEFADMW
Sbjct: 301 LSNPLEPDEFADMW 314

[Close]

BLAST of CsGy1G026020 vs. TAIR 10
Match: AT3G15460.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 545.4 bits (1404), Expect = 3.0e-155
Identity = 259/317 (81.70%), Postives = 284/317 (89.59%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60
           M +KRKHSE++    VK  D APERP+RTL+GWKDKK   E+   +  +VFRNKEKVLVT
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLNMVSLLPHCKKD+KVE++SS+GATLNEL+ELKG SS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180
           DLY+WM K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D HWKLLKEM
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLKEM 180

Query: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIE 240
           + QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDK+ARG LDKMTLIE
Sbjct: 181 LTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGDLDKMTLIE 240

Query: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHE 300
           VGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KAKTRRKMHE
Sbjct: 241 VGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKAKTRRKMHE 300

Query: 301 LSNPLEPDEFADMWKEQ 318
           LSNPLEPDEF DMW ++
Sbjct: 301 LSNPLEPDEFTDMWNDE 315

[Close]

BLAST of CsGy1G026020 vs. TAIR 10
Match: AT1G52930.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 533.9 bits (1374), Expect = 8.9e-152
Identity = 254/318 (79.87%), Postives = 284/318 (89.31%), Query Frame = 0


Query: 1   MAKKRKHSESLPTVSVKKDDD-APERPKRTLMGWKDKKVTK-ESEVGSDHAVFRNKEKVL 60
           M +KRKHSE+     VKK D+ AP+RPKRTL+GWKDK   + E       + F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRI+FRYR LMLN+VSLLPHCKKD+KVE++SSKGATLNEL+ELK  +S LFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLY+WM K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD HWKLLK
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLLK 180

Query: 181 EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240
           EM+ Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQISVPHNESDK+A+GGLDKMTL
Sbjct: 181 EMLTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAKGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+KAKTR+KM
Sbjct: 241 IEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKIKAKTRKKM 300

Query: 301 HELSNPLEPDEFADMWKE 317
           HELSNPLEPDEFADMWK+
Sbjct: 301 HELSNPLEPDEFADMWKD 318

The following BLAST results are available for this feature:

BLAST of CsGy1G026020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE16	4.2e-154	81.70	Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q9C928	1.3e-150	79.87	Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q3SZZ0	3.3e-66	48.87	Ribosome biogenesis protein BRX1 homolog OS=Bos taurus OX=9913 GN=BRIX1 PE=2 SV=...	[more]
Q8TDN6	3.3e-66	48.87	Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens OX=9606 GN=BRIX1 PE=1 S...	[more]
Q4QQT6	7.3e-66	46.90	Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus OX=10116 GN=Brix1 ...	[more]

BLAST of CsGy1G026020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659901.2	1.23e-233	99.37	ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus] >XP_031743378.1 rib...	[more]
XP_008450669.1	1.09e-229	97.47	PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450670.1 ...	[more]
XP_038879963.1	2.03e-225	95.25	ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida] >XP_03887996...	[more]
XP_038894805.1	2.88e-225	95.25	ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida]	[more]
KAG7037539.1	5.81e-225	94.94	Ribosome biogenesis protein BRX1-like 1 [Cucurbita argyrosperma subsp. argyrospe...	[more]

BLAST of CsGy1G026020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQS3	5.29e-230	97.47	ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE...	[more]
A0A5D3CG95	5.29e-230	97.47	Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1E0T2	2.92e-225	95.58	ribosome biogenesis protein BRX1 homolog 1-like OS=Momordica charantia OX=3673 G...	[more]
A0A6J1EW75	4.66e-224	94.62	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HZ18	1.45e-222	94.90	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsGy1G026020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15460.1	3.0e-155	81.70	Ribosomal RNA processing Brix domain protein	[more]
AT1G52930.1	8.9e-152	79.87	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 58..252 e-value: 9.1E-51 score: 184.6
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 62..251 e-value: 3.9E-35 score: 121.7
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 55..258 score: 32.44677
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..317
None	No IPR available	PANTHER	PTHR13634:SF3	RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG 2	coord: 1..316
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 56..255
IPR026532	Ribosome biogenesis protein BRX1	PANTHER	PTHR13634	RIBOSOME BIOGENESIS PROTEIN BRIX	coord: 1..316

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G026020.2	CsGy1G026020.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0019843	rRNA binding