Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTGCAAACCCTAATTTTAATTTCTCTGCAACTTTCCCCCTCCTTCAACTTTTGAAACCCAAAACAAAACTCAAACGAAACCCTATCAATACCTTCTTCTATTCAGTATTCCCTTCTGGGATTGTTTCATTCTTCCATTCTTTTCATCTTCAATTCTTTACCTTGTTTACGGTTTTTTTTTTCTTCTTTCTATTACGTCTCTCAATGAACCACCCTCCTCTTCCTCCTCCACCTTCCACTCCAAATCCCCCTACCAAAATGCTGAAGGAGTGTGGAAATTGCGGCTCTCAAGGTCGATGGATTCTGCATCACGTTCGTATACGAGGTATTAATCGTCGCCTTTGCACTTCCTGCGTCCTTCGTCTTCATCCCAGTTCGTTTTGCCCTTCTTGCTTCCAGTTCTATGATCTTTCTGTGTCTCCTCATCCCTCCAATCGTTTCACTTGTTCTAAATGTTCTTCTATTACGCATTCTCATTGCGTTGTCAATCCGGCTTGCCCCGACCCTCAGCTTCTGTCCTCCACTACCTCCTCCTCTTATCTCTGCCCTCCCTGCGCCAAGCCCAATTTTTCATTTTTCGATTCCGACTCAAAGCCTCGAATTTCACCTAAGTCTATTGATAGGAAGACGGCTGTGGTGTTGCTCTGTGCGGCTAAGATTGCCTCTGCATCGATGGCTAAGGCAGTGATTGTGGCGCGAGCGGATGCGGAGAGGAAAGTGAGGGAGGCGGCTATGGCGAGGAAGAGAGCAAGAGAGGCTCTTGAGCATGTCGGTTTTGTTGTGGCTAGAGAAAGAGCTAGGCGTAAGGAAGAGGCTTCAGTGGAGGTTTCAGGTTCTGGGAATTTGGGAGTGAAGGAGAAAGAGAGGAATAGGACTTTGGGTCCTACGGTGAAAGCAGAGAATGCTTTTGAGATGCCTGCAGTATCAACTTTGAACACTGGTAGTGCTTTAACTCAGAGAAGGGAGAGCTTAAATGGGTTTGTGAGACAGATGTCAATGGTGAAGAATGAGGCGGCTGCTTCCATGGAGGAATCTGCAAGGCATAAAAATGTTGAGGTTGCTGAACGTTTACAGAGTAACAACAACATTGGTTTATTAAATGAGAAGGAGAAGAATGAGAATGGTGAAGTTGAGCATGTGAAAAATGATCATATTGGAGGAACTGTTAATACCACAAAATAGCCCCTTTTCATGATACAGAGCCAAGAATTGATCAAATCATGGTTTCCTTGGTCTTTTGCTAAATGATATTGTTCTAAAGTATGAAAATTCATTGAGCTACTTTTGTACTGGGTTTGACCTGGCTCTTTAGGAATTCATGTAGTGAGGATAGCACAATTGCCTGTGAGTTTTTTTTTTTTTTTAGAGATATTCCTTCTTGATATTTGGGGTGGTCTAGAGTTTATCTGAGTTCTCTTTTTAAGGGCCCTCTCCTAGCAATGGTGTAAAAAATGTAGATTAATTGAAGTTCAAATTATTCTGTGTACTTGCCACATTCTTACTTTGCATATTACTGCAACATTCGTTTAGTTTTCTGAAACCCTCTC
mRNA sequence
AATTTGCAAACCCTAATTTTAATTTCTCTGCAACTTTCCCCCTCCTTCAACTTTTGAAACCCAAAACAAAACTCAAACGAAACCCTATCAATACCTTCTTCTATTCAGTATTCCCTTCTGGGATTGTTTCATTCTTCCATTCTTTTCATCTTCAATTCTTTACCTTGTTTACGGTTTTTTTTTTCTTCTTTCTATTACGTCTCTCAATGAACCACCCTCCTCTTCCTCCTCCACCTTCCACTCCAAATCCCCCTACCAAAATGCTGAAGGAGTGTGGAAATTGCGGCTCTCAAGGTCGATGGATTCTGCATCACGTTCGTATACGAGGTATTAATCGTCGCCTTTGCACTTCCTGCGTCCTTCGTCTTCATCCCAGTTCGTTTTGCCCTTCTTGCTTCCAGTTCTATGATCTTTCTGTGTCTCCTCATCCCTCCAATCGTTTCACTTGTTCTAAATGTTCTTCTATTACGCATTCTCATTGCGTTGTCAATCCGGCTTGCCCCGACCCTCAGCTTCTGTCCTCCACTACCTCCTCCTCTTATCTCTGCCCTCCCTGCGCCAAGCCCAATTTTTCATTTTTCGATTCCGACTCAAAGCCTCGAATTTCACCTAAGTCTATTGATAGGAAGACGGCTGTGGTGTTGCTCTGTGCGGCTAAGATTGCCTCTGCATCGATGGCTAAGGCAGTGATTGTGGCGCGAGCGGATGCGGAGAGGAAAGTGAGGGAGGCGGCTATGGCGAGGAAGAGAGCAAGAGAGGCTCTTGAGCATGTCGGTTTTGTTGTGGCTAGAGAAAGAGCTAGGCGTAAGGAAGAGGCTTCAGTGGAGGTTTCAGGTTCTGGGAATTTGGGAGTGAAGGAGAAAGAGAGGAATAGGACTTTGGGTCCTACGGTGAAAGCAGAGAATGCTTTTGAGATGCCTGCAGTATCAACTTTGAACACTGGTAGTGCTTTAACTCAGAGAAGGGAGAGCTTAAATGGGTTTGTGAGACAGATGTCAATGGTGAAGAATGAGGCGGCTGCTTCCATGGAGGAATCTGCAAGGCATAAAAATGTTGAGGTTGCTGAACGTTTACAGAGTAACAACAACATTGGTTTATTAAATGAGAAGGAGAAGAATGAGAATGGTGAAGTTGAGCATGTGAAAAATGATCATATTGGAGGAACTGTTAATACCACAAAATAGCCCCTTTTCATGATACAGAGCCAAGAATTGATCAAATCATGGTTTCCTTGGTCTTTTGCTAAATGATATTGTTCTAAAGTATGAAAATTCATTGAGCTACTTTTGTACTGGGTTTGACCTGGCTCTTTAGGAATTCATGTAGTGAGGATAGCACAATTGCCTGTGAGTTTTTTTTTTTTTTTAGAGATATTCCTTCTTGATATTTGGGGTGGTCTAGAGTTTATCTGAGTTCTCTTTTTAAGGGCCCTCTCCTAGCAATGGTGTAAAAAATGTAGATTAATTGAAGTTCAAATTATTCTGTGTACTTGCCACATTCTTACTTTGCATATTACTGCAACATTCGTTTAGTTTTCTGAAACCCTCTC
Coding sequence (CDS)
ATGAACCACCCTCCTCTTCCTCCTCCACCTTCCACTCCAAATCCCCCTACCAAAATGCTGAAGGAGTGTGGAAATTGCGGCTCTCAAGGTCGATGGATTCTGCATCACGTTCGTATACGAGGTATTAATCGTCGCCTTTGCACTTCCTGCGTCCTTCGTCTTCATCCCAGTTCGTTTTGCCCTTCTTGCTTCCAGTTCTATGATCTTTCTGTGTCTCCTCATCCCTCCAATCGTTTCACTTGTTCTAAATGTTCTTCTATTACGCATTCTCATTGCGTTGTCAATCCGGCTTGCCCCGACCCTCAGCTTCTGTCCTCCACTACCTCCTCCTCTTATCTCTGCCCTCCCTGCGCCAAGCCCAATTTTTCATTTTTCGATTCCGACTCAAAGCCTCGAATTTCACCTAAGTCTATTGATAGGAAGACGGCTGTGGTGTTGCTCTGTGCGGCTAAGATTGCCTCTGCATCGATGGCTAAGGCAGTGATTGTGGCGCGAGCGGATGCGGAGAGGAAAGTGAGGGAGGCGGCTATGGCGAGGAAGAGAGCAAGAGAGGCTCTTGAGCATGTCGGTTTTGTTGTGGCTAGAGAAAGAGCTAGGCGTAAGGAAGAGGCTTCAGTGGAGGTTTCAGGTTCTGGGAATTTGGGAGTGAAGGAGAAAGAGAGGAATAGGACTTTGGGTCCTACGGTGAAAGCAGAGAATGCTTTTGAGATGCCTGCAGTATCAACTTTGAACACTGGTAGTGCTTTAACTCAGAGAAGGGAGAGCTTAAATGGGTTTGTGAGACAGATGTCAATGGTGAAGAATGAGGCGGCTGCTTCCATGGAGGAATCTGCAAGGCATAAAAATGTTGAGGTTGCTGAACGTTTACAGAGTAACAACAACATTGGTTTATTAAATGAGAAGGAGAAGAATGAGAATGGTGAAGTTGAGCATGTGAAAAATGATCATATTGGAGGAACTGTTAATACCACAAAATAG
Protein sequence
MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNEKEKNENGEVEHVKNDHIGGTVNTTK*
Homology
BLAST of CsGy1G024947 vs. NCBI nr
Match:
XP_011659447.1 (uncharacterized protein LOC105436183 [Cucumis sativus] >KGN65987.1 hypothetical protein Csa_007541 [Cucumis sativus])
HSP 1 Score: 629 bits (1623), Expect = 4.09e-227
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0
Query: 1 MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1 MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
Query: 61 PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP
Sbjct: 61 PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
Query: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK
Sbjct: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
Query: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV
Sbjct: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
Query: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300
STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE
Sbjct: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300
Query: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
KEKNENGEVEHVKNDHIGGTVNTTK
Sbjct: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
BLAST of CsGy1G024947 vs. NCBI nr
Match:
XP_008450515.1 (PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo] >KAA0050965.1 putative DNA binding protein [Cucumis melo var. makuwa] >TYK10311.1 putative DNA binding protein [Cucumis melo var. makuwa])
HSP 1 Score: 609 bits (1570), Expect = 4.90e-219
Identity = 313/325 (96.31%), Postives = 318/325 (97.85%), Query Frame = 0
Query: 1 MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
MNHP LPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1 MNHPHLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
Query: 61 PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSST+SSSYLCPPCAKP
Sbjct: 61 PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTSSSSYLCPPCAKP 120
Query: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
NFSFFD DSKPRISPKSIDRKTAVVLLCAAKIAS SM KA IVARADAERKVREAAMARK
Sbjct: 121 NFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASTSMGKAAIVARADAERKVREAAMARK 180
Query: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
RAREALEHVGFV+ARERARRKEEASVEVSGSGNLG+KEKERNR LGPTVKAENAFE+PAV
Sbjct: 181 RAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNRNLGPTVKAENAFEIPAV 240
Query: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300
STLNTG+ALTQRRESLNGFVRQMSMVKNE AASMEESARHKNVEVAERLQSNNNIGLLNE
Sbjct: 241 STLNTGTALTQRRESLNGFVRQMSMVKNEVAASMEESARHKNVEVAERLQSNNNIGLLNE 300
Query: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
KEKNENGEVEHVKNDHIGGTVNTTK
Sbjct: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
BLAST of CsGy1G024947 vs. NCBI nr
Match:
XP_038878318.1 (uncharacterized protein LOC120070585 [Benincasa hispida])
HSP 1 Score: 551 bits (1420), Expect = 3.78e-196
Identity = 297/330 (90.00%), Postives = 306/330 (92.73%), Query Frame = 0
Query: 1 MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
MNHP LPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1 MNHPHLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
Query: 61 PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
PSCFQFYDLSVSPHP NRFTCSKCSSITHSHCVVNPACPDPQLLSSTTS SYLCPPCAKP
Sbjct: 61 PSCFQFYDLSVSPHPVNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTS-SYLCPPCAKP 120
Query: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
NFSFFD DSKPRISPKSIDRKTAVVLLCAAKIASASM KAVIVARADAERKVREAAMARK
Sbjct: 121 NFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMARK 180
Query: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
RAREALEHVGF++ARERARRKEEAS+EVSGSGNL +KE ERNR LG VK EN FE+PAV
Sbjct: 181 RAREALEHVGFLLARERARRKEEASMEVSGSGNLVMKENERNRNLGSMVKVENPFEVPAV 240
Query: 241 STLN-TGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLN 300
STLN TGSALTQRRESLNGFVRQMSMVKNE AASMEE+ R KNVE A+RLQSNNNIGL N
Sbjct: 241 STLNNTGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVE-ADRLQSNNNIGL-N 300
Query: 301 EKEK----NENGEVEHVKNDHIGGTVNTTK 325
EKEK NENGEVEHV++D IGG VNTTK
Sbjct: 301 EKEKSGNENENGEVEHVQHDRIGGIVNTTK 327
BLAST of CsGy1G024947 vs. NCBI nr
Match:
XP_022155464.1 (uncharacterized protein LOC111022599 [Momordica charantia])
HSP 1 Score: 470 bits (1209), Expect = 8.31e-164
Identity = 262/344 (76.16%), Postives = 284/344 (82.56%), Query Frame = 0
Query: 1 MNHPPLPPPPST---------PNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCV 60
MNHP PPPPS PNPPTKM ECGNCGSQ RW+LHHVR+RG+NRRLCTSCV
Sbjct: 1 MNHPRPPPPPSVVPAMVNNPNPNPPTKMPSECGNCGSQSRWMLHHVRLRGVNRRLCTSCV 60
Query: 61 LRLHPSSFCPSCFQFYDLSVSPHP--SNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTS 120
LRLHP+SFCPSCFQFYD S SPHP SNRFTC KCSSI+HSHCV++P+ DP LSS+ S
Sbjct: 61 LRLHPTSFCPSCFQFYDPSASPHPQPSNRFTCVKCSSISHSHCVLSPSSSDPHPLSSS-S 120
Query: 121 SSYLCPPCAKPNFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAE 180
SSYLCPPCAKPNFSFFD DSKPRIS KSIDRK AVVLLCAAKIASASM KAVIVARADAE
Sbjct: 121 SSYLCPPCAKPNFSFFDLDSKPRISDKSIDRKMAVVLLCAAKIASASMGKAVIVARADAE 180
Query: 181 RKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTV 240
RKVREAA+ARKRAREALEHVGFVVARERARRKEEASVEVSGSG++G+KEKERNR LG V
Sbjct: 181 RKVREAAIARKRAREALEHVGFVVARERARRKEEASVEVSGSGSIGIKEKERNRNLGSMV 240
Query: 241 KAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERL 300
K EN+ E AV+ NT SALT RRESLNGFVRQMSMVKN+ AAS+EE+ R KNVE A+RL
Sbjct: 241 KMENSCEGSAVANSNTSSALTHRRESLNGFVRQMSMVKNDVAASLEEALRQKNVE-ADRL 300
Query: 301 QSNNNIGLLNEKEKN--------ENGEVEHVKNDHIGGTVNTTK 325
QS+NN LNEKEK+ ENGEV+ V ND IGG VNT K
Sbjct: 301 QSSNN-NTLNEKEKSGNFGDSGHENGEVKRVHNDQIGGNVNTAK 341
BLAST of CsGy1G024947 vs. NCBI nr
Match:
KAG6590513.1 (hypothetical protein SDJN03_15936, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 449 bits (1155), Expect = 4.67e-156
Identity = 248/321 (77.26%), Postives = 271/321 (84.42%), Query Frame = 0
Query: 1 MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
MNHP LPPPP PTK+ ECGNCGS GRWILHHVR+RGINRRLCTSCVLRLHP+SFC
Sbjct: 1 MNHPHLPPPP-----PTKVQTECGNCGSHGRWILHHVRLRGINRRLCTSCVLRLHPTSFC 60
Query: 61 PSCFQFYDLSVSP-HPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAK 120
PSCF FYD SVSP HPSNR TC KCSSITHSHCV+NPA DP LLSS+TS YLCPPCAK
Sbjct: 61 PSCFHFYDPSVSPPHPSNRLTCLKCSSITHSHCVLNPASSDPHLLSSSTS--YLCPPCAK 120
Query: 121 PNFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMAR 180
PNFSFFD DS PR S KSIDRKTAVVLLCAAKIASASM KAVIVARADAERKVRE A+AR
Sbjct: 121 PNFSFFDLDSLPRNSHKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREVAVAR 180
Query: 181 KRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPA 240
KRAREALEHVGF++ARERARRKEEAS+EVSGSGN+ K+KERNR LG VK EN+ E PA
Sbjct: 181 KRAREALEHVGFLLARERARRKEEASMEVSGSGNMETKDKERNRNLGSMVKTENSLETPA 240
Query: 241 VSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLN 300
V TLNTG+ LTQRRESLNGFVRQMSMVKNEAAAS++E+A A+RLQSNN I +
Sbjct: 241 VPTLNTGTTLTQRRESLNGFVRQMSMVKNEAAASLQETAE------ADRLQSNNTIPS-S 300
Query: 301 EKEKN----ENGEVEHVKNDH 316
EKEK+ +NG+VE+V+NDH
Sbjct: 301 EKEKSGNCADNGDVENVQNDH 307
BLAST of CsGy1G024947 vs. ExPASy TrEMBL
Match:
A0A0A0LYS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560710 PE=4 SV=1)
HSP 1 Score: 629 bits (1623), Expect = 1.98e-227
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0
Query: 1 MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1 MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
Query: 61 PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP
Sbjct: 61 PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
Query: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK
Sbjct: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
Query: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV
Sbjct: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
Query: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300
STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE
Sbjct: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300
Query: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
KEKNENGEVEHVKNDHIGGTVNTTK
Sbjct: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
BLAST of CsGy1G024947 vs. ExPASy TrEMBL
Match:
A0A5D3CEV9 (Putative DNA binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004650 PE=4 SV=1)
HSP 1 Score: 609 bits (1570), Expect = 2.37e-219
Identity = 313/325 (96.31%), Postives = 318/325 (97.85%), Query Frame = 0
Query: 1 MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
MNHP LPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1 MNHPHLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
Query: 61 PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSST+SSSYLCPPCAKP
Sbjct: 61 PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTSSSSYLCPPCAKP 120
Query: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
NFSFFD DSKPRISPKSIDRKTAVVLLCAAKIAS SM KA IVARADAERKVREAAMARK
Sbjct: 121 NFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASTSMGKAAIVARADAERKVREAAMARK 180
Query: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
RAREALEHVGFV+ARERARRKEEASVEVSGSGNLG+KEKERNR LGPTVKAENAFE+PAV
Sbjct: 181 RAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNRNLGPTVKAENAFEIPAV 240
Query: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300
STLNTG+ALTQRRESLNGFVRQMSMVKNE AASMEESARHKNVEVAERLQSNNNIGLLNE
Sbjct: 241 STLNTGTALTQRRESLNGFVRQMSMVKNEVAASMEESARHKNVEVAERLQSNNNIGLLNE 300
Query: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
KEKNENGEVEHVKNDHIGGTVNTTK
Sbjct: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
BLAST of CsGy1G024947 vs. ExPASy TrEMBL
Match:
A0A1S3BQ20 (uncharacterized protein LOC103492096 OS=Cucumis melo OX=3656 GN=LOC103492096 PE=4 SV=1)
HSP 1 Score: 609 bits (1570), Expect = 2.37e-219
Identity = 313/325 (96.31%), Postives = 318/325 (97.85%), Query Frame = 0
Query: 1 MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
MNHP LPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1 MNHPHLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
Query: 61 PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSST+SSSYLCPPCAKP
Sbjct: 61 PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTSSSSYLCPPCAKP 120
Query: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
NFSFFD DSKPRISPKSIDRKTAVVLLCAAKIAS SM KA IVARADAERKVREAAMARK
Sbjct: 121 NFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASTSMGKAAIVARADAERKVREAAMARK 180
Query: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
RAREALEHVGFV+ARERARRKEEASVEVSGSGNLG+KEKERNR LGPTVKAENAFE+PAV
Sbjct: 181 RAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNRNLGPTVKAENAFEIPAV 240
Query: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300
STLNTG+ALTQRRESLNGFVRQMSMVKNE AASMEESARHKNVEVAERLQSNNNIGLLNE
Sbjct: 241 STLNTGTALTQRRESLNGFVRQMSMVKNEVAASMEESARHKNVEVAERLQSNNNIGLLNE 300
Query: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
KEKNENGEVEHVKNDHIGGTVNTTK
Sbjct: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325
BLAST of CsGy1G024947 vs. ExPASy TrEMBL
Match:
A0A6J1DQC5 (uncharacterized protein LOC111022599 OS=Momordica charantia OX=3673 GN=LOC111022599 PE=4 SV=1)
HSP 1 Score: 470 bits (1209), Expect = 4.02e-164
Identity = 262/344 (76.16%), Postives = 284/344 (82.56%), Query Frame = 0
Query: 1 MNHPPLPPPPST---------PNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCV 60
MNHP PPPPS PNPPTKM ECGNCGSQ RW+LHHVR+RG+NRRLCTSCV
Sbjct: 1 MNHPRPPPPPSVVPAMVNNPNPNPPTKMPSECGNCGSQSRWMLHHVRLRGVNRRLCTSCV 60
Query: 61 LRLHPSSFCPSCFQFYDLSVSPHP--SNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTS 120
LRLHP+SFCPSCFQFYD S SPHP SNRFTC KCSSI+HSHCV++P+ DP LSS+ S
Sbjct: 61 LRLHPTSFCPSCFQFYDPSASPHPQPSNRFTCVKCSSISHSHCVLSPSSSDPHPLSSS-S 120
Query: 121 SSYLCPPCAKPNFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAE 180
SSYLCPPCAKPNFSFFD DSKPRIS KSIDRK AVVLLCAAKIASASM KAVIVARADAE
Sbjct: 121 SSYLCPPCAKPNFSFFDLDSKPRISDKSIDRKMAVVLLCAAKIASASMGKAVIVARADAE 180
Query: 181 RKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTV 240
RKVREAA+ARKRAREALEHVGFVVARERARRKEEASVEVSGSG++G+KEKERNR LG V
Sbjct: 181 RKVREAAIARKRAREALEHVGFVVARERARRKEEASVEVSGSGSIGIKEKERNRNLGSMV 240
Query: 241 KAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERL 300
K EN+ E AV+ NT SALT RRESLNGFVRQMSMVKN+ AAS+EE+ R KNVE A+RL
Sbjct: 241 KMENSCEGSAVANSNTSSALTHRRESLNGFVRQMSMVKNDVAASLEEALRQKNVE-ADRL 300
Query: 301 QSNNNIGLLNEKEKN--------ENGEVEHVKNDHIGGTVNTTK 325
QS+NN LNEKEK+ ENGEV+ V ND IGG VNT K
Sbjct: 301 QSSNN-NTLNEKEKSGNFGDSGHENGEVKRVHNDQIGGNVNTAK 341
BLAST of CsGy1G024947 vs. ExPASy TrEMBL
Match:
A0A6P3Z9P1 (uncharacterized protein LOC107411671 OS=Ziziphus jujuba OX=326968 GN=LOC107411671 PE=4 SV=1)
HSP 1 Score: 248 bits (633), Expect = 4.90e-77
Identity = 140/224 (62.50%), Postives = 166/224 (74.11%), Query Frame = 0
Query: 22 ECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFTC 81
ECGNCGSQ RW+LHHVRIRGI+RRLCTSCVLRLHPSSFCPSC Q YD + +P S R TC
Sbjct: 34 ECGNCGSQKRWVLHHVRIRGIHRRLCTSCVLRLHPSSFCPSCLQCYDTTNTPVSSKRLTC 93
Query: 82 SKCSSITHSHCVVNPACPDPQLLSSTT-----SSSYLCPPCAKPNFSFFDSDSKPRISPK 141
+KCSS THSHC + P P S+TT SS+YLCPPCA PNF+FFD DS P K
Sbjct: 94 AKCSSFTHSHCA---SLPPPSASSTTTNTTPSSSTYLCPPCATPNFTFFDLDSDPN---K 153
Query: 142 SIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVAR- 201
+ID++ A+VLLCA+KIAS SMAKAVIVARA+AER+VREAA+ARKRAREAL+H+ +V
Sbjct: 154 AIDKRLALVLLCASKIASTSMAKAVIVARAEAERRVREAALARKRAREALDHLALLVHSR 213
Query: 202 -ERARRKEEASV-EVSGSGNLGVKEKERNRTLGPTVKAENAFEM 237
++ RK+ A V EVSGS NL K KE+ + P + A EM
Sbjct: 214 GDKVVRKDVAEVSEVSGSANLVHKHKEKEKEKNPPLFASQGKEM 251
BLAST of CsGy1G024947 vs. TAIR 10
Match:
AT1G09520.1 (LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT3G17460.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )
HSP 1 Score: 135.6 bits (340), Expect = 7.3e-32
Identity = 97/269 (36.06%), Postives = 136/269 (50.56%), Query Frame = 0
Query: 11 STPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLS 70
+T + + C +CGS W++H VR+R R CT C+LR HP+SFCP CF YD
Sbjct: 14 ATSDAAANSTERCDDCGSSDAWVIHTVRLRASLRFFCTHCLLRNHPASFCPGCFALYD-- 73
Query: 71 VSPHPSNRFTCS--KCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPN-FSFFDS 130
SP R +CS C S+TH HC + SYLCPPC PN FSFF
Sbjct: 74 SSPPSFRRVSCSIKGCHSLTHIHCA-----------GDESHLSYLCPPCRDPNSFSFF-- 133
Query: 131 DSKPRI---SPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRARE 190
+P + + +D+ + LCAAKIA++SM KAV+ A+ + +R+ +EAA+A+KRARE
Sbjct: 134 --RPIVDENGSRFVDKALSEAFLCAAKIAASSMNKAVMTAKCETDRRGKEAALAKKRARE 193
Query: 191 ALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLN 250
ALE V + A+E+AR E + T+ T ++ +T N
Sbjct: 194 ALEQVVMLDAKEKARSVVPKLKEAPVDQKPKLSPASNGATVKETESSDTTTTPTTTTTKN 253
Query: 251 TGSALTQRRESLNGFVRQMSMVKNEAAAS 274
G Q + Q++ VK EA AS
Sbjct: 254 NGGTEKQNPAT------QLAKVKQEADAS 259
BLAST of CsGy1G024947 vs. TAIR 10
Match:
AT3G17460.1 (PHD finger family protein )
HSP 1 Score: 89.7 bits (221), Expect = 4.6e-18
Identity = 68/200 (34.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query: 16 PTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHP 75
P + +EC C + +H V G RRLCT C+L+ + FC CF +D +V P
Sbjct: 3 PEQKQRECIVCREKEPSFIHTVIKTGAFRRLCTDCLLKEYREHFCSVCFNLFDNAVPPQA 62
Query: 76 SNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTS-----SSYLCPPCAKPNFSFFD---- 135
R C C S TH C P P SS++S SS+ C PC+ PNF+FF
Sbjct: 63 --RIICVNCPSSTHLSCSTQP--PSSSAASSSSSAPPPASSFTCQPCSNPNFTFFPKSRV 122
Query: 136 SDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREAL 195
++ P +P + K+A+ L+ A I+ A+M KAV + + +A +K+ A A+ RA+ AL
Sbjct: 123 NEDVPDETP--LTPKSAMALVAAGNISVANMNKAVALLKEEALKKIIAAKTAKLRAKGAL 182
Query: 196 EHVGFVVARE---RARRKEE 204
++ +V R+ +RKE+
Sbjct: 183 TNLQDIVIRQSKVTGKRKED 196
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_011659447.1 | 4.09e-227 | 100.00 | uncharacterized protein LOC105436183 [Cucumis sativus] >KGN65987.1 hypothetical ... | [more] |
XP_008450515.1 | 4.90e-219 | 96.31 | PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo] >KAA0050965.1 put... | [more] |
XP_038878318.1 | 3.78e-196 | 90.00 | uncharacterized protein LOC120070585 [Benincasa hispida] | [more] |
XP_022155464.1 | 8.31e-164 | 76.16 | uncharacterized protein LOC111022599 [Momordica charantia] | [more] |
KAG6590513.1 | 4.67e-156 | 77.26 | hypothetical protein SDJN03_15936, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LYS3 | 1.98e-227 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560710 PE=4 SV=1 | [more] |
A0A5D3CEV9 | 2.37e-219 | 96.31 | Putative DNA binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
A0A1S3BQ20 | 2.37e-219 | 96.31 | uncharacterized protein LOC103492096 OS=Cucumis melo OX=3656 GN=LOC103492096 PE=... | [more] |
A0A6J1DQC5 | 4.02e-164 | 76.16 | uncharacterized protein LOC111022599 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6P3Z9P1 | 4.90e-77 | 62.50 | uncharacterized protein LOC107411671 OS=Ziziphus jujuba OX=326968 GN=LOC10741167... | [more] |
Match Name | E-value | Identity | Description | |
AT1G09520.1 | 7.3e-32 | 36.06 | LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12... | [more] |
AT3G17460.1 | 4.6e-18 | 34.00 | PHD finger family protein | [more] |