CsGy1G024890 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G024890
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Pentatricopeptide repeat-containing protein
Location	Gy14Chr1: 23887302 .. 23889157 (-)
RNA-Seq Expression	CsGy1G024890
Synteny	CsGy1G024890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACTGGTAACAATCTTATAGTTGTTTCAGCAATCTATTTACATTTATGAAGTACCATACTCGATTTCTCGGGCACACTACATCAGTTATACAGTTGCATCGGATTATTAATATTAGTTTACATAATAGGCATTGAGTTATTAATATCATCGAGTTATTAATATTGTATGGTCCTTAAGCTTTTACGTCGTGTCTACTCAGGCCTTTTATTTTTAAGCATTAGTGTAATGGGTTTCTAAACTTTTATAGTTGTGTTTGTTTAGTCTATATAGTTTTAAAAGTTCTTAGGAGCTCTTAACCTTTCATGCTTATATCTATTTAATCTTAGCACTTTAAAATGTTTCTAATATTTTCTTACACTTATATGGCATGCTAACTGTGTATTAGTTAAGAATCATAGGTGGGTTGATTTCAAACACAATCCTAAAATAATATTGTTACCACGCCACATGTGTGTTAAATTAGTTTTGTGATGAGAACTTATCAAACACAAAATTGAAAGCTTAGGTAACTATTAGATGCGTATGAGGTATAGGAGCCAAATATAAGACAACCCAGAAAGTTCAGGACCAAAATTCCAACTTAACGTTAACATTATCACAATCTGTTTATCTTTATGTAACAATGCATGCTTTGGCCTACAGGAAGATGTTGGACCAAACTCATTTAGCTTTTCCATTGCGGCTAGAGCTTGTGCTTCAATCAGCTCGTATTCATGTGGAAAGCAAATACATGCAGCAGTTACCAAATATGGTCTCCACTGTGATGCTCCAGTAATGAATTCAATACTCGACATGTATTGCAGGTGCAACTATTTATGTGATGCCAAAAGATGCTTTGGTGAATTGACCGAAAAGAACTTAATTACATGGAACACCTTGATAGCGGGATATGAAAGGTCAGATTCCAGTGAGTCTCTAAGTTTATTTTTCCAAATGGGGTCTGAAGGCTATAAGCCGAATTGCTTTACATTCACAAGTATTACAGCTGCTTGTGCCAATTTAGCAGTCTTAAGCTGTGGACAACAAGTTCATGGTGGAATTGTTCGTAGAGGATTTGACAAAAATGTGGCATTGATCAATTCACTTATTGACATGTACGCAAAGTGTGGAAGCATAAGCGATTCACACAAACTCTTCTGTGATATGCCTGGAAGAGATTTGGTGTCCTGGACTACTATGATGATTGGCTATGGAGCACATGGATATGGGAAAGAGGCCGTGAAGTTGTTCGATGAAATGGTTCAAAGTGGAATTCAACCTGATCGGATAGTGTTCATGGGAGTCCTATGTGGTTGCAGCCATGCTGGACTTGTGGACAAAGGACTAAAATATTTTAGATCTATGCTGGAGGACTACAATATAAACCCAGATCAAGAAATCTACAGGTGTGTGGTGGACTTGCTTGGTCGTGCTGGAAGAGTTGAGGAGGCTTTTCAACTTGTCGAGAATATGCCATTTGAACCTGATGAGTCTGTATGGGGTGCTCTCCTTGGAGCTTGTAAAGCGTATAAACTTTCCAATCTAGGGAATTTGGCAGCTCAAAGAGTATTGGATAGAAGGCCGAACATGGCGGGGACCTATCTGCTGTTGTCCAAAATATATGCAGCTGAAGGTAAATGGGGCGAGTTTGCCAAAATGAGGAAGCTGATGAAAGGGATGAACAAAAAGAAAGAAGTGGGTAAGAGTTGGATTGAAATCAGAAATGAAGTTTATAGTTTTGTGGTTGGAGCTAAGATGGGCCCTCACATAGAGTGGGTGCACAAAGTAATCGATGTACTTATTTGGCATATGAAAGATGATGGGGATGTGACAGATTTGGATTACATAGTAGATTATCTAGAAGGGACTTAA

mRNA sequence

ATGTTACTGGAAGATGTTGGACCAAACTCATTTAGCTTTTCCATTGCGGCTAGAGCTTGTGCTTCAATCAGCTCGTATTCATGTGGAAAGCAAATACATGCAGCAGTTACCAAATATGGTCTCCACTGTGATGCTCCAGTAATGAATTCAATACTCGACATGTATTGCAGGTGCAACTATTTATGTGATGCCAAAAGATGCTTTGGTGAATTGACCGAAAAGAACTTAATTACATGGAACACCTTGATAGCGGGATATGAAAGGTCAGATTCCAGTGAGTCTCTAAGTTTATTTTTCCAAATGGGGTCTGAAGGCTATAAGCCGAATTGCTTTACATTCACAAGTATTACAGCTGCTTGTGCCAATTTAGCAGTCTTAAGCTGTGGACAACAAGTTCATGGTGGAATTGTTCGTAGAGGATTTGACAAAAATGTGGCATTGATCAATTCACTTATTGACATGTACGCAAAGTGTGGAAGCATAAGCGATTCACACAAACTCTTCTGTGATATGCCTGGAAGAGATTTGGTGTCCTGGACTACTATGATGATTGGCTATGGAGCACATGGATATGGGAAAGAGGCCGTGAAGTTGTTCGATGAAATGGTTCAAAGTGGAATTCAACCTGATCGGATAGTGTTCATGGGAGTCCTATGTGGTTGCAGCCATGCTGGACTTGTGGACAAAGGACTAAAATATTTTAGATCTATGCTGGAGGACTACAATATAAACCCAGATCAAGAAATCTACAGGTGTGTGGTGGACTTGCTTGGTCGTGCTGGAAGAGTTGAGGAGGCTTTTCAACTTGTCGAGAATATGCCATTTGAACCTGATGAGTCTGTATGGGGTGCTCTCCTTGGAGCTTGTAAAGCGTATAAACTTTCCAATCTAGGGAATTTGGCAGCTCAAAGAGTATTGGATAGAAGGCCGAACATGGCGGGGACCTATCTGCTGTTGTCCAAAATATATGCAGCTGAAGGTAAATGGGGCGAGTTTGCCAAAATGAGGAAGCTGATGAAAGGGATGAACAAAAAGAAAGAAGTGGGTAAGAGTTGGATTGAAATCAGAAATGAAGTTTATAGTTTTGTGGTTGGAGCTAAGATGGGCCCTCACATAGAGTGGGTGCACAAAGTAATCGATGTACTTATTTGGCATATGAAAGATGATGGGGATGTGACAGATTTGGATTACATAGTAGATTATCTAGAAGGGACTTAA

Coding sequence (CDS)

ATGTTACTGGAAGATGTTGGACCAAACTCATTTAGCTTTTCCATTGCGGCTAGAGCTTGTGCTTCAATCAGCTCGTATTCATGTGGAAAGCAAATACATGCAGCAGTTACCAAATATGGTCTCCACTGTGATGCTCCAGTAATGAATTCAATACTCGACATGTATTGCAGGTGCAACTATTTATGTGATGCCAAAAGATGCTTTGGTGAATTGACCGAAAAGAACTTAATTACATGGAACACCTTGATAGCGGGATATGAAAGGTCAGATTCCAGTGAGTCTCTAAGTTTATTTTTCCAAATGGGGTCTGAAGGCTATAAGCCGAATTGCTTTACATTCACAAGTATTACAGCTGCTTGTGCCAATTTAGCAGTCTTAAGCTGTGGACAACAAGTTCATGGTGGAATTGTTCGTAGAGGATTTGACAAAAATGTGGCATTGATCAATTCACTTATTGACATGTACGCAAAGTGTGGAAGCATAAGCGATTCACACAAACTCTTCTGTGATATGCCTGGAAGAGATTTGGTGTCCTGGACTACTATGATGATTGGCTATGGAGCACATGGATATGGGAAAGAGGCCGTGAAGTTGTTCGATGAAATGGTTCAAAGTGGAATTCAACCTGATCGGATAGTGTTCATGGGAGTCCTATGTGGTTGCAGCCATGCTGGACTTGTGGACAAAGGACTAAAATATTTTAGATCTATGCTGGAGGACTACAATATAAACCCAGATCAAGAAATCTACAGGTGTGTGGTGGACTTGCTTGGTCGTGCTGGAAGAGTTGAGGAGGCTTTTCAACTTGTCGAGAATATGCCATTTGAACCTGATGAGTCTGTATGGGGTGCTCTCCTTGGAGCTTGTAAAGCGTATAAACTTTCCAATCTAGGGAATTTGGCAGCTCAAAGAGTATTGGATAGAAGGCCGAACATGGCGGGGACCTATCTGCTGTTGTCCAAAATATATGCAGCTGAAGGTAAATGGGGCGAGTTTGCCAAAATGAGGAAGCTGATGAAAGGGATGAACAAAAAGAAAGAAGTGGGTAAGAGTTGGATTGAAATCAGAAATGAAGTTTATAGTTTTGTGGTTGGAGCTAAGATGGGCCCTCACATAGAGTGGGTGCACAAAGTAATCGATGTACTTATTTGGCATATGAAAGATGATGGGGATGTGACAGATTTGGATTACATAGTAGATTATCTAGAAGGGACTTAA

Protein sequence

MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT*

Homology

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BLAST of CsGy1G024890 vs. ExPASy Swiss-Prot
Match: Q9FXA9 (Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E64 PE=3 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 7.5e-140
Identity = 240/402 (59.70%), Postives = 311/402 (77.36%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           MLLE+     +  +IA RA ASI S + GKQIHA+V K G   + PVMNSILD+YCRC Y
Sbjct: 204 MLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGY 263

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 120
           L +AK  F E+ +K+LITWNTLI+  ERSDSSE+L +F +  S+G+ PNC+TFTS+ AAC
Sbjct: 264 LSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAAC 323

Query: 121 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCD-MPGRDLVSW 180
           AN+A L+CGQQ+HG I RRGF+KNV L N+LIDMYAKCG+I DS ++F + +  R+LVSW
Sbjct: 324 ANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSW 383

Query: 181 TTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLE 240
           T+MMIGYG+HGYG EAV+LFD+MV SGI+PDRIVFM VL  C HAGLV+KGLKYF  M  
Sbjct: 384 TSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMES 443

Query: 241 DYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNL-G 300
           +Y INPD++IY CVVDLLGRAG++ EA++LVE MPF+PDES WGA+LGACKA+K + L  
Sbjct: 444 EYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLIS 503

Query: 301 NLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNE 360
            LAA++V++ +P M GTY++LS IYAAEGKW +FA++RK+M+ M  KKE G SWI + N+
Sbjct: 504 RLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQ 563

Query: 361 VYSFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVD 401
           V+SF V  KM P+   V+ V+ +LI   ++ G V +LD +V+
Sbjct: 564 VFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVN 605

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BLAST of CsGy1G024890 vs. ExPASy Swiss-Prot
Match: Q5G1T1 (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 5.3e-85
Identity = 151/399 (37.84%), Postives = 243/399 (60.90%), Query Frame = 0


Query: 6   VGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAK 65
           V PN F+FS A +AC ++S    GKQ+     K GL  ++ V NS++ M+ + + + DA+
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 428

Query: 66  RCFGELTEKNLITWNTLIAGYERS-DSSESLSLFFQMGSEGYKPNCFTFTSITAACANLA 125
           R F  L+EKNL+++NT + G  R+ +  ++  L  ++       + FTF S+ +  AN+ 
Sbjct: 429 RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG 488

Query: 126 VLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMI 185
            +  G+Q+H  +V+ G   N  + N+LI MY+KCGSI  + ++F  M  R+++SWT+M+ 
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548

Query: 186 GYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNIN 245
           G+  HG+    ++ F++M++ G++P+ + ++ +L  CSH GLV +G ++F SM ED+ I 
Sbjct: 549 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608

Query: 246 PDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQR 305
           P  E Y C+VDLL RAG + +AF+ +  MPF+ D  VW   LGAC+ +  + LG LAA++
Sbjct: 609 PKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARK 668

Query: 306 VLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVV 365
           +L+  PN    Y+ LS IYA  GKW E  +MR+ MK  N  KE G SWIE+ ++++ F V
Sbjct: 669 ILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYV 728

Query: 366 GAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLE 404
           G    P+   ++  +D LI  +K  G V D D ++  LE
Sbjct: 729 GDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLE 767

[Close]

BLAST of CsGy1G024890 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 7.6e-84
Identity = 160/434 (36.87%), Postives = 251/434 (57.83%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYG-LHCDAPVMNSILDMYCRCN 60
           ML   V P+  + +    ACAS+S+   G+++H  V K   L  D  + N+ +DMY +C+
Sbjct: 244 MLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303

Query: 61  YLCD-------------------------------AKRCFGELTEKNLITWNTLIAGY-E 120
            + +                               A+  F ++ E+N+++WN LIAGY +
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363

Query: 121 RSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGF------ 180
             ++ E+LSLF  +  E   P  ++F +I  ACA+LA L  G Q H  +++ GF      
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423

Query: 181 DKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDE 240
           + ++ + NSLIDMY KCG + + + +F  M  RD VSW  M+IG+  +GYG EA++LF E
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRE 483

Query: 241 MVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAG 300
           M++SG +PD I  +GVL  C HAG V++G  YF SM  D+ + P ++ Y C+VDLLGRAG
Sbjct: 484 MLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAG 543

Query: 301 RVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSK 360
            +EEA  ++E MP +PD  +WG+LL ACK ++   LG   A+++L+  P+ +G Y+LLS 
Sbjct: 544 FLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSN 603

Query: 361 IYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDV 396
           +YA  GKW +   +RK M+     K+ G SWI+I+   + F+V  K  P  + +H ++D+
Sbjct: 604 MYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDI 663

[Close]

BLAST of CsGy1G024890 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 8.4e-83
Identity = 147/386 (38.08%), Postives = 241/386 (62.44%), Query Frame = 0


Query: 21  ASISSYSCGKQIHAAVTKYG-LHC-DAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLIT 80
           A ++ Y  G+++  A   +  + C +    N+++  Y +C  + +AK  F ++ +++ ++
Sbjct: 317 AMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 376

Query: 81  WNTLIAGYERSDSS-ESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIV 140
           W  +IAGY +S  S E+L LF QM  EG + N  +F+S  + CA++  L  G+Q+HG +V
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436

Query: 141 RRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVK 200
           + G++    + N+L+ MY KCGSI +++ LF +M G+D+VSW TM+ GY  HG+G+ A++
Sbjct: 437 KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 496

Query: 201 LFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLL 260
            F+ M + G++PD    + VL  CSH GLVDKG +YF +M +DY + P+ + Y C+VDLL
Sbjct: 497 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL 556

Query: 261 GRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYL 320
           GRAG +E+A  L++NMPFEPD ++WG LLGA + +  + L   AA ++    P  +G Y+
Sbjct: 557 GRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYV 616

Query: 321 LLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHK 380
           LLS +YA+ G+WG+  K+R  M+    KK  G SWIEI+N+ ++F VG +  P  + +  
Sbjct: 617 LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFA 676

Query: 381 VIDVLIWHMKDDGDVTDLDYIVDYLE 404
            ++ L   MK  G V+    ++  +E
Sbjct: 677 FLEELDLRMKKAGYVSKTSVVLHDVE 702

[Close]

BLAST of CsGy1G024890 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 4.2e-82
Identity = 156/405 (38.52%), Postives = 244/405 (60.25%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           ML ++V PN +++S   R+C  +S     + +H  + K GL  D  V ++++D++ +   
Sbjct: 153 MLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGE 212

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGY-ERSDSSESLSLFFQMGSEGYKPNCFTFTSITAA 120
             DA   F E+   + I WN++I G+ + S S  +L LF +M   G+     T TS+  A
Sbjct: 213 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 272

Query: 121 CANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSW 180
           C  LA+L  G Q H  IV+  +D+++ L N+L+DMY KCGS+ D+ ++F  M  RD+++W
Sbjct: 273 CTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 332

Query: 181 TTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLE 240
           +TM+ G   +GY +EA+KLF+ M  SG +P+ I  +GVL  CSHAGL++ G  YFRSM +
Sbjct: 333 STMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 392

Query: 241 DYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGN 300
            Y I+P +E Y C++DLLG+AG++++A +L+  M  EPD   W  LLGAC+  +   L  
Sbjct: 393 LYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAE 452

Query: 301 LAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEV 360
            AA++V+   P  AGTY LLS IYA   KW    ++R  M+    KKE G SWIE+  ++
Sbjct: 453 YAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQI 512

Query: 361 YSFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEG 405
           ++F++G    P I  V K ++ LI  +   G V + ++++  LEG
Sbjct: 513 HAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEG 552

[Close]

BLAST of CsGy1G024890 vs. NCBI nr
Match: XP_011659402.1 (putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis sativus] >XP_031746026.1 putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis sativus])

HSP 1 Score: 839 bits (2167), Expect = 4.70e-304
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY
Sbjct: 202 MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 261

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 120
           LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC
Sbjct: 262 LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 321

Query: 121 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT 180
           ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT
Sbjct: 322 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT 381

Query: 181 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED 240
           TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED
Sbjct: 382 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED 441

Query: 241 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL 300
           YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL
Sbjct: 442 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL 501

Query: 301 AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY 360
           AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY
Sbjct: 502 AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY 561

Query: 361 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT 405
           SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT
Sbjct: 562 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT 606

[Close]

BLAST of CsGy1G024890 vs. NCBI nr
Match: XP_008450527.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis melo] >XP_008450530.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis melo] >XP_008450531.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis melo] >XP_008450532.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis melo] >KAA0050956.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK10303.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 812 bits (2098), Expect = 1.50e-293
Identity = 393/405 (97.04%), Postives = 397/405 (98.02%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY
Sbjct: 202 MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 261

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 120
           LCDAKRCF ELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC
Sbjct: 262 LCDAKRCFDELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 321

Query: 121 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT 180
           ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSI+DSHKLFCDMPGRDLVSWT
Sbjct: 322 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSINDSHKLFCDMPGRDLVSWT 381

Query: 181 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED 240
           TMMIGYG HGYGKEAVKLFDEMVQSGIQPDRIVFMGVL GCSHAGLVD+GLKYFRSMLED
Sbjct: 382 TMMIGYGTHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLSGCSHAGLVDRGLKYFRSMLED 441

Query: 241 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL 300
           YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKA KLSNLGNL
Sbjct: 442 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKACKLSNLGNL 501

Query: 301 AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY 360
           AAQRVL  RPNMAGTYLLLS IYAAEGKWGEFAKMRKLMKGM+KKKEVGKSWIEIRNEVY
Sbjct: 502 AAQRVLGTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDKKKEVGKSWIEIRNEVY 561

Query: 361 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT 405
           SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDV DL+YIVDYLEGT
Sbjct: 562 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVADLNYIVDYLEGT 606

[Close]

BLAST of CsGy1G024890 vs. NCBI nr
Match: XP_038879403.1 (putative pentatricopeptide repeat-containing protein At1g56570 isoform X1 [Benincasa hispida] >XP_038879404.1 putative pentatricopeptide repeat-containing protein At1g56570 isoform X1 [Benincasa hispida])

HSP 1 Score: 762 bits (1968), Expect = 8.80e-274
Identity = 369/405 (91.11%), Postives = 383/405 (94.57%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           MLLEDV PNSFSFSIA RACASI SYSCGKQIHAAVTKYGLHCD PVMNSILDMYCRCNY
Sbjct: 202 MLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAAVTKYGLHCDVPVMNSILDMYCRCNY 261

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 120
           LCDAKRCF E+T KNLITWNTLIAGYERSDSSESLSLF QMGSEGY+PNCFTFTSITAAC
Sbjct: 262 LCDAKRCFCEMTHKNLITWNTLIAGYERSDSSESLSLFLQMGSEGYEPNCFTFTSITAAC 321

Query: 121 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT 180
           ANLAVLSCGQQVH GIVRRGFDKNVALIN+LIDMYAKCG+I+DSHKLFCDMP RDLVSWT
Sbjct: 322 ANLAVLSCGQQVHSGIVRRGFDKNVALINALIDMYAKCGNINDSHKLFCDMPERDLVSWT 381

Query: 181 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED 240
           TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFM VL GCSHAGL+DKGL YFRSMLE 
Sbjct: 382 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMAVLSGCSHAGLLDKGLGYFRSMLEV 441

Query: 241 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL 300
           YN+NPDQEIY CVVDLLGRAGRVEEAFQLVE+MPFEPDESVWGALLGACKAY+LSNLGNL
Sbjct: 442 YNLNPDQEIYGCVVDLLGRAGRVEEAFQLVESMPFEPDESVWGALLGACKAYELSNLGNL 501

Query: 301 AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY 360
           AAQRVLD +PNMAGTYLLLS IYAAEGKWGEFAKMRKLMKGM  +KE GKSWIEIRNEVY
Sbjct: 502 AAQRVLDTKPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMVNRKEAGKSWIEIRNEVY 561

Query: 361 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT 405
           SFVVG K GPHIEWVHKVI++LIWHMKD GDVTDLDYIV+YLEGT
Sbjct: 562 SFVVGDKTGPHIEWVHKVIELLIWHMKD-GDVTDLDYIVEYLEGT 605

[Close]

BLAST of CsGy1G024890 vs. NCBI nr
Match: XP_022157012.1 (putative pentatricopeptide repeat-containing protein At1g56570 [Momordica charantia])

HSP 1 Score: 734 bits (1895), Expect = 8.83e-262
Identity = 354/405 (87.41%), Postives = 374/405 (92.35%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           MLLEDV PNSFSFSIA RACASI S S GKQIHAAVTKYGLH D PVMNSILDMYCRCN 
Sbjct: 259 MLLEDVEPNSFSFSIAVRACASIGSSSYGKQIHAAVTKYGLHSDVPVMNSILDMYCRCNC 318

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 120
           LCDAKRCFGE+T KNLITWNTLIAGYERSDSSESL LF  MG EGY+PNCFTFTS+TAAC
Sbjct: 319 LCDAKRCFGEMTVKNLITWNTLIAGYERSDSSESLRLFSHMGCEGYEPNCFTFTSVTAAC 378

Query: 121 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT 180
           ANLAVLSCGQQVHGGIVRRGFDK+VALIN+LIDMYAKCG+++DSHKLF DM  RDLVSWT
Sbjct: 379 ANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAKCGNVNDSHKLFSDMTQRDLVSWT 438

Query: 181 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED 240
           TMMIGYGAHGYGKEA+KLFDEMV+S I+PDRIVFM VL  CSHAGLVDKGL YFRSMLED
Sbjct: 439 TMMIGYGAHGYGKEAIKLFDEMVRSRIRPDRIVFMAVLSACSHAGLVDKGLIYFRSMLED 498

Query: 241 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL 300
           Y +NPDQEIY CVVDLLGRAGRVEEAFQL E+MPFEPDESVWGALLGACK Y+LSNLGNL
Sbjct: 499 YRLNPDQEIYGCVVDLLGRAGRVEEAFQLAESMPFEPDESVWGALLGACKEYELSNLGNL 558

Query: 301 AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY 360
           AAQRVLD RPNMAGTYLLLS IYAAEGKW EFAKMRKLMKGM+ KKEVGKSWIEIRNEVY
Sbjct: 559 AAQRVLDMRPNMAGTYLLLSNIYAAEGKWNEFAKMRKLMKGMDNKKEVGKSWIEIRNEVY 618

Query: 361 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT 405
           SFVVG KMGPHIEWVHKV+++LIWHMKDDGDVTDL Y+V+YLEGT
Sbjct: 619 SFVVGDKMGPHIEWVHKVLELLIWHMKDDGDVTDLKYLVEYLEGT 663

[Close]

BLAST of CsGy1G024890 vs. NCBI nr
Match: XP_022989366.1 (putative pentatricopeptide repeat-containing protein At1g56570 [Cucurbita maxima])

HSP 1 Score: 729 bits (1883), Expect = 6.97e-261
Identity = 348/396 (87.88%), Postives = 371/396 (93.69%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           MLL++V PNSFSFSIA RACASI SY+ GKQIHAAVTKYGLH D PV+NSILDMYCRCNY
Sbjct: 203 MLLDNVEPNSFSFSIAVRACASIGSYAYGKQIHAAVTKYGLHSDIPVLNSILDMYCRCNY 262

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 120
           LCDAKRCFGE+T +NLITWNTLIAGYERSDSSESLSLF QMGSEGY+PNCFTFTSITAAC
Sbjct: 263 LCDAKRCFGEMTRRNLITWNTLIAGYERSDSSESLSLFSQMGSEGYEPNCFTFTSITAAC 322

Query: 121 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT 180
           ANLAVL CGQQVHGGI+RRGFD +VAL+N+LIDMYAKCG+I+DSHKLFCDMP RDLVSWT
Sbjct: 323 ANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKCGNINDSHKLFCDMPQRDLVSWT 382

Query: 181 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED 240
           TMMIGYG+HGYGKE +KLFDEMV+SGIQPDRIVFM VL  CSHAGLV+KGL YFRSMLED
Sbjct: 383 TMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVLSACSHAGLVNKGLSYFRSMLED 442

Query: 241 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL 300
           YN+NPD EIY CVVDLLGRAGRVEEAFQLVE+MPFEPDESVWGALLGACKAY+LSNLG L
Sbjct: 443 YNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPDESVWGALLGACKAYELSNLGKL 502

Query: 301 AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY 360
           AAQRVLD RPNMAGTYLLLS IYAAEGKWGEFAKMRKLMKGM+ KKEVGKSWIEIRNEVY
Sbjct: 503 AAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVY 562

Query: 361 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLD 396
           SFVVG KMGPHIE VHKV+ +LIWHMKDDGDVTDLD
Sbjct: 563 SFVVGDKMGPHIECVHKVLKLLIWHMKDDGDVTDLD 598

[Close]

BLAST of CsGy1G024890 vs. ExPASy TrEMBL
Match: A0A0A0LW37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G555630 PE=4 SV=1)

HSP 1 Score: 839 bits (2167), Expect = 2.28e-304
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY
Sbjct: 202 MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 261

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 120
           LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC
Sbjct: 262 LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 321

Query: 121 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT 180
           ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT
Sbjct: 322 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT 381

Query: 181 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED 240
           TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED
Sbjct: 382 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED 441

Query: 241 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL 300
           YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL
Sbjct: 442 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL 501

Query: 301 AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY 360
           AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY
Sbjct: 502 AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY 561

Query: 361 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT 405
           SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT
Sbjct: 562 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT 606

[Close]

BLAST of CsGy1G024890 vs. ExPASy TrEMBL
Match: A0A1S3BQ30 (putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucumis melo OX=3656 GN=LOC103492105 PE=4 SV=1)

HSP 1 Score: 812 bits (2098), Expect = 7.27e-294
Identity = 393/405 (97.04%), Postives = 397/405 (98.02%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY
Sbjct: 202 MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 261

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 120
           LCDAKRCF ELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC
Sbjct: 262 LCDAKRCFDELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 321

Query: 121 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT 180
           ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSI+DSHKLFCDMPGRDLVSWT
Sbjct: 322 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSINDSHKLFCDMPGRDLVSWT 381

Query: 181 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED 240
           TMMIGYG HGYGKEAVKLFDEMVQSGIQPDRIVFMGVL GCSHAGLVD+GLKYFRSMLED
Sbjct: 382 TMMIGYGTHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLSGCSHAGLVDRGLKYFRSMLED 441

Query: 241 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL 300
           YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKA KLSNLGNL
Sbjct: 442 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKACKLSNLGNL 501

Query: 301 AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY 360
           AAQRVL  RPNMAGTYLLLS IYAAEGKWGEFAKMRKLMKGM+KKKEVGKSWIEIRNEVY
Sbjct: 502 AAQRVLGTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDKKKEVGKSWIEIRNEVY 561

Query: 361 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT 405
           SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDV DL+YIVDYLEGT
Sbjct: 562 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVADLNYIVDYLEGT 606

[Close]

BLAST of CsGy1G024890 vs. ExPASy TrEMBL
Match: A0A5D3CEL5 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004550 PE=4 SV=1)

HSP 1 Score: 812 bits (2098), Expect = 7.27e-294
Identity = 393/405 (97.04%), Postives = 397/405 (98.02%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY
Sbjct: 202 MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 261

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 120
           LCDAKRCF ELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC
Sbjct: 262 LCDAKRCFDELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 321

Query: 121 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT 180
           ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSI+DSHKLFCDMPGRDLVSWT
Sbjct: 322 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSINDSHKLFCDMPGRDLVSWT 381

Query: 181 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED 240
           TMMIGYG HGYGKEAVKLFDEMVQSGIQPDRIVFMGVL GCSHAGLVD+GLKYFRSMLED
Sbjct: 382 TMMIGYGTHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLSGCSHAGLVDRGLKYFRSMLED 441

Query: 241 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL 300
           YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKA KLSNLGNL
Sbjct: 442 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKACKLSNLGNL 501

Query: 301 AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY 360
           AAQRVL  RPNMAGTYLLLS IYAAEGKWGEFAKMRKLMKGM+KKKEVGKSWIEIRNEVY
Sbjct: 502 AAQRVLGTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDKKKEVGKSWIEIRNEVY 561

Query: 361 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT 405
           SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDV DL+YIVDYLEGT
Sbjct: 562 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVADLNYIVDYLEGT 606

[Close]

BLAST of CsGy1G024890 vs. ExPASy TrEMBL
Match: A0A6J1DTG1 (putative pentatricopeptide repeat-containing protein At1g56570 OS=Momordica charantia OX=3673 GN=LOC111023836 PE=4 SV=1)

HSP 1 Score: 734 bits (1895), Expect = 4.27e-262
Identity = 354/405 (87.41%), Postives = 374/405 (92.35%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           MLLEDV PNSFSFSIA RACASI S S GKQIHAAVTKYGLH D PVMNSILDMYCRCN 
Sbjct: 259 MLLEDVEPNSFSFSIAVRACASIGSSSYGKQIHAAVTKYGLHSDVPVMNSILDMYCRCNC 318

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 120
           LCDAKRCFGE+T KNLITWNTLIAGYERSDSSESL LF  MG EGY+PNCFTFTS+TAAC
Sbjct: 319 LCDAKRCFGEMTVKNLITWNTLIAGYERSDSSESLRLFSHMGCEGYEPNCFTFTSVTAAC 378

Query: 121 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT 180
           ANLAVLSCGQQVHGGIVRRGFDK+VALIN+LIDMYAKCG+++DSHKLF DM  RDLVSWT
Sbjct: 379 ANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAKCGNVNDSHKLFSDMTQRDLVSWT 438

Query: 181 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED 240
           TMMIGYGAHGYGKEA+KLFDEMV+S I+PDRIVFM VL  CSHAGLVDKGL YFRSMLED
Sbjct: 439 TMMIGYGAHGYGKEAIKLFDEMVRSRIRPDRIVFMAVLSACSHAGLVDKGLIYFRSMLED 498

Query: 241 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL 300
           Y +NPDQEIY CVVDLLGRAGRVEEAFQL E+MPFEPDESVWGALLGACK Y+LSNLGNL
Sbjct: 499 YRLNPDQEIYGCVVDLLGRAGRVEEAFQLAESMPFEPDESVWGALLGACKEYELSNLGNL 558

Query: 301 AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY 360
           AAQRVLD RPNMAGTYLLLS IYAAEGKW EFAKMRKLMKGM+ KKEVGKSWIEIRNEVY
Sbjct: 559 AAQRVLDMRPNMAGTYLLLSNIYAAEGKWNEFAKMRKLMKGMDNKKEVGKSWIEIRNEVY 618

Query: 361 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEGT 405
           SFVVG KMGPHIEWVHKV+++LIWHMKDDGDVTDL Y+V+YLEGT
Sbjct: 619 SFVVGDKMGPHIEWVHKVLELLIWHMKDDGDVTDLKYLVEYLEGT 663

[Close]

BLAST of CsGy1G024890 vs. ExPASy TrEMBL
Match: A0A6J1JJV4 (putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucurbita maxima OX=3661 GN=LOC111486440 PE=4 SV=1)

HSP 1 Score: 729 bits (1883), Expect = 3.38e-261
Identity = 348/396 (87.88%), Postives = 371/396 (93.69%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           MLL++V PNSFSFSIA RACASI SY+ GKQIHAAVTKYGLH D PV+NSILDMYCRCNY
Sbjct: 203 MLLDNVEPNSFSFSIAVRACASIGSYAYGKQIHAAVTKYGLHSDIPVLNSILDMYCRCNY 262

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 120
           LCDAKRCFGE+T +NLITWNTLIAGYERSDSSESLSLF QMGSEGY+PNCFTFTSITAAC
Sbjct: 263 LCDAKRCFGEMTRRNLITWNTLIAGYERSDSSESLSLFSQMGSEGYEPNCFTFTSITAAC 322

Query: 121 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWT 180
           ANLAVL CGQQVHGGI+RRGFD +VAL+N+LIDMYAKCG+I+DSHKLFCDMP RDLVSWT
Sbjct: 323 ANLAVLGCGQQVHGGIIRRGFDNSVALVNALIDMYAKCGNINDSHKLFCDMPQRDLVSWT 382

Query: 181 TMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLED 240
           TMMIGYG+HGYGKE +KLFDEMV+SGIQPDRIVFM VL  CSHAGLV+KGL YFRSMLED
Sbjct: 383 TMMIGYGSHGYGKEVIKLFDEMVRSGIQPDRIVFMAVLSACSHAGLVNKGLSYFRSMLED 442

Query: 241 YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNL 300
           YN+NPD EIY CVVDLLGRAGRVEEAFQLVE+MPFEPDESVWGALLGACKAY+LSNLG L
Sbjct: 443 YNLNPDHEIYGCVVDLLGRAGRVEEAFQLVESMPFEPDESVWGALLGACKAYELSNLGKL 502

Query: 301 AAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVY 360
           AAQRVLD RPNMAGTYLLLS IYAAEGKWGEFAKMRKLMKGM+ KKEVGKSWIEIRNEVY
Sbjct: 503 AAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVY 562

Query: 361 SFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLD 396
           SFVVG KMGPHIE VHKV+ +LIWHMKDDGDVTDLD
Sbjct: 563 SFVVGDKMGPHIECVHKVLKLLIWHMKDDGDVTDLD 598

[Close]

BLAST of CsGy1G024890 vs. TAIR 10
Match: AT1G56570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 498.4 bits (1282), Expect = 5.3e-141
Identity = 240/402 (59.70%), Postives = 311/402 (77.36%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           MLLE+     +  +IA RA ASI S + GKQIHA+V K G   + PVMNSILD+YCRC Y
Sbjct: 204 MLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGY 263

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAAC 120
           L +AK  F E+ +K+LITWNTLI+  ERSDSSE+L +F +  S+G+ PNC+TFTS+ AAC
Sbjct: 264 LSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAAC 323

Query: 121 ANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCD-MPGRDLVSW 180
           AN+A L+CGQQ+HG I RRGF+KNV L N+LIDMYAKCG+I DS ++F + +  R+LVSW
Sbjct: 324 ANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSW 383

Query: 181 TTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLE 240
           T+MMIGYG+HGYG EAV+LFD+MV SGI+PDRIVFM VL  C HAGLV+KGLKYF  M  
Sbjct: 384 TSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMES 443

Query: 241 DYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNL-G 300
           +Y INPD++IY CVVDLLGRAG++ EA++LVE MPF+PDES WGA+LGACKA+K + L  
Sbjct: 444 EYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLIS 503

Query: 301 NLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNE 360
            LAA++V++ +P M GTY++LS IYAAEGKW +FA++RK+M+ M  KKE G SWI + N+
Sbjct: 504 RLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQ 563

Query: 361 VYSFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVD 401
           V+SF V  KM P+   V+ V+ +LI   ++ G V +LD +V+
Sbjct: 564 VFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVN 605

[Close]

BLAST of CsGy1G024890 vs. TAIR 10
Match: AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 316.2 bits (809), Expect = 3.7e-86
Identity = 151/399 (37.84%), Postives = 243/399 (60.90%), Query Frame = 0


Query: 6   VGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAK 65
           V PN F+FS A +AC ++S    GKQ+     K GL  ++ V NS++ M+ + + + DA+
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 428

Query: 66  RCFGELTEKNLITWNTLIAGYERS-DSSESLSLFFQMGSEGYKPNCFTFTSITAACANLA 125
           R F  L+EKNL+++NT + G  R+ +  ++  L  ++       + FTF S+ +  AN+ 
Sbjct: 429 RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG 488

Query: 126 VLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMI 185
            +  G+Q+H  +V+ G   N  + N+LI MY+KCGSI  + ++F  M  R+++SWT+M+ 
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548

Query: 186 GYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNIN 245
           G+  HG+    ++ F++M++ G++P+ + ++ +L  CSH GLV +G ++F SM ED+ I 
Sbjct: 549 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608

Query: 246 PDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQR 305
           P  E Y C+VDLL RAG + +AF+ +  MPF+ D  VW   LGAC+ +  + LG LAA++
Sbjct: 609 PKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARK 668

Query: 306 VLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVV 365
           +L+  PN    Y+ LS IYA  GKW E  +MR+ MK  N  KE G SWIE+ ++++ F V
Sbjct: 669 ILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYV 728

Query: 366 GAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLE 404
           G    P+   ++  +D LI  +K  G V D D ++  LE
Sbjct: 729 GDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLE 767

[Close]

BLAST of CsGy1G024890 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 312.4 bits (799), Expect = 5.4e-85
Identity = 160/434 (36.87%), Postives = 251/434 (57.83%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYG-LHCDAPVMNSILDMYCRCN 60
           ML   V P+  + +    ACAS+S+   G+++H  V K   L  D  + N+ +DMY +C+
Sbjct: 244 MLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303

Query: 61  YLCD-------------------------------AKRCFGELTEKNLITWNTLIAGY-E 120
            + +                               A+  F ++ E+N+++WN LIAGY +
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363

Query: 121 RSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGF------ 180
             ++ E+LSLF  +  E   P  ++F +I  ACA+LA L  G Q H  +++ GF      
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423

Query: 181 DKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDE 240
           + ++ + NSLIDMY KCG + + + +F  M  RD VSW  M+IG+  +GYG EA++LF E
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRE 483

Query: 241 MVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAG 300
           M++SG +PD I  +GVL  C HAG V++G  YF SM  D+ + P ++ Y C+VDLLGRAG
Sbjct: 484 MLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAG 543

Query: 301 RVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSK 360
            +EEA  ++E MP +PD  +WG+LL ACK ++   LG   A+++L+  P+ +G Y+LLS 
Sbjct: 544 FLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSN 603

Query: 361 IYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDV 396
           +YA  GKW +   +RK M+     K+ G SWI+I+   + F+V  K  P  + +H ++D+
Sbjct: 604 MYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDI 663

[Close]

BLAST of CsGy1G024890 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 308.9 bits (790), Expect = 6.0e-84
Identity = 147/386 (38.08%), Postives = 241/386 (62.44%), Query Frame = 0


Query: 21  ASISSYSCGKQIHAAVTKYG-LHC-DAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLIT 80
           A ++ Y  G+++  A   +  + C +    N+++  Y +C  + +AK  F ++ +++ ++
Sbjct: 317 AMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 376

Query: 81  WNTLIAGYERSDSS-ESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIV 140
           W  +IAGY +S  S E+L LF QM  EG + N  +F+S  + CA++  L  G+Q+HG +V
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436

Query: 141 RRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVK 200
           + G++    + N+L+ MY KCGSI +++ LF +M G+D+VSW TM+ GY  HG+G+ A++
Sbjct: 437 KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 496

Query: 201 LFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLL 260
            F+ M + G++PD    + VL  CSH GLVDKG +YF +M +DY + P+ + Y C+VDLL
Sbjct: 497 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL 556

Query: 261 GRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYL 320
           GRAG +E+A  L++NMPFEPD ++WG LLGA + +  + L   AA ++    P  +G Y+
Sbjct: 557 GRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYV 616

Query: 321 LLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHK 380
           LLS +YA+ G+WG+  K+R  M+    KK  G SWIEI+N+ ++F VG +  P  + +  
Sbjct: 617 LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFA 676

Query: 381 VIDVLIWHMKDDGDVTDLDYIVDYLE 404
            ++ L   MK  G V+    ++  +E
Sbjct: 677 FLEELDLRMKKAGYVSKTSVVLHDVE 702

[Close]

BLAST of CsGy1G024890 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 306.6 bits (784), Expect = 3.0e-83
Identity = 156/405 (38.52%), Postives = 244/405 (60.25%), Query Frame = 0


Query: 1   MLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNY 60
           ML ++V PN +++S   R+C  +S     + +H  + K GL  D  V ++++D++ +   
Sbjct: 153 MLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGE 212

Query: 61  LCDAKRCFGELTEKNLITWNTLIAGY-ERSDSSESLSLFFQMGSEGYKPNCFTFTSITAA 120
             DA   F E+   + I WN++I G+ + S S  +L LF +M   G+     T TS+  A
Sbjct: 213 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 272

Query: 121 CANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSW 180
           C  LA+L  G Q H  IV+  +D+++ L N+L+DMY KCGS+ D+ ++F  M  RD+++W
Sbjct: 273 CTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 332

Query: 181 TTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLE 240
           +TM+ G   +GY +EA+KLF+ M  SG +P+ I  +GVL  CSHAGL++ G  YFRSM +
Sbjct: 333 STMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 392

Query: 241 DYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGN 300
            Y I+P +E Y C++DLLG+AG++++A +L+  M  EPD   W  LLGAC+  +   L  
Sbjct: 393 LYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAE 452

Query: 301 LAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEV 360
            AA++V+   P  AGTY LLS IYA   KW    ++R  M+    KKE G SWIE+  ++
Sbjct: 453 YAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQI 512

Query: 361 YSFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEG 405
           ++F++G    P I  V K ++ LI  +   G V + ++++  LEG
Sbjct: 513 HAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEG 552

The following BLAST results are available for this feature:

BLAST of CsGy1G024890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXA9	7.5e-140	59.70	Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis th...	[more]
Q5G1T1	5.3e-85	37.84	Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop...	[more]
Q9SIT7	7.6e-84	36.87	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9SY02	8.4e-83	38.08	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q9SI53	4.2e-82	38.52	Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop...	[more]

BLAST of CsGy1G024890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659402.1	4.70e-304	100.00	putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis sativus]...	[more]
XP_008450527.1	1.50e-293	97.04	PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570 [Cucum...	[more]
XP_038879403.1	8.80e-274	91.11	putative pentatricopeptide repeat-containing protein At1g56570 isoform X1 [Benin...	[more]
XP_022157012.1	8.83e-262	87.41	putative pentatricopeptide repeat-containing protein At1g56570 [Momordica charan...	[more]
XP_022989366.1	6.97e-261	87.88	putative pentatricopeptide repeat-containing protein At1g56570 [Cucurbita maxima...	[more]

BLAST of CsGy1G024890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW37	2.28e-304	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G555630 PE=4 SV=1	[more]
A0A1S3BQ30	7.27e-294	97.04	putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucumis melo O...	[more]
A0A5D3CEL5	7.27e-294	97.04	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A6J1DTG1	4.27e-262	87.41	putative pentatricopeptide repeat-containing protein At1g56570 OS=Momordica char...	[more]
A0A6J1JJV4	3.38e-261	87.88	putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucurbita maxi...	[more]

BLAST of CsGy1G024890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56570.1	5.3e-141	59.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G49170.1	3.7e-86	37.84	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	5.4e-85	36.87	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G02750.1	6.0e-84	38.08	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G03880.1	3.0e-83	38.52	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 175..221 e-value: 1.1E-9 score: 38.3
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 242..273 e-value: 1.4E-5 score: 24.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 177..210 e-value: 1.7E-8 score: 32.1 coord: 215..246 e-value: 1.8E-4 score: 19.4 coord: 148..176 e-value: 0.0018 score: 16.3 coord: 249..273 e-value: 8.4E-4 score: 17.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 149..174 e-value: 0.002 score: 18.2 coord: 77..105 e-value: 0.39 score: 11.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 175..209 score: 12.463056
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..90 e-value: 2.0E-12 score: 49.1 coord: 91..235 e-value: 2.1E-35 score: 124.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 236..307 e-value: 8.0E-6 score: 27.5
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 1..399
None	No IPR available	PANTHER	PTHR47925:SF28	BNAA09G15330D PROTEIN	coord: 1..399

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G024890.2	CsGy1G024890.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding