Homology
BLAST of CsGy1G023930 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 436.4 bits (1121), Expect = 6.2e-121
Identity = 250/685 (36.50%), Postives = 379/685 (55.33%), Query Frame = 0
Query: 29 TLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLID-CYANLGL--LNHSLQVFCSV 88
+LSLL + C ++Q L+ IHA+ I G H SKLI+ C + L +++ VF ++
Sbjct: 36 SLSLLHN-CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 95
Query: 89 IDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGR 148
+PNL ++N + R + L +Y M++ + P+ T+PFVL+SC+ G+
Sbjct: 96 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 155
Query: 149 TIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQND 208
IHG+++KLG DL V T+L MY + E+AH++FDK +
Sbjct: 156 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR---------------- 215
Query: 209 NGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNT 268
D++ T
Sbjct: 216 ------------------------------------------------------DVVSYT 275
Query: 269 AVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRS 328
A++ Y+ + +A+KLFD++P KD V WN MI+ YA G E LELFK M ++ +R
Sbjct: 276 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 335
Query: 329 DLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIF 388
D T + V+S+ AQ ++ G+Q H I +G S + + N+LID+Y +C L++AC +F
Sbjct: 336 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 395
Query: 389 NWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALE 448
+ K VISW+ +I GY AL LF +M G + V M++ILPA H+GA++
Sbjct: 396 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 455
Query: 449 NVKYLHGYSMK--LGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMI 508
+++H Y K G+T+ SL T+L+ YAKCG IE A ++F I K L WN+MI
Sbjct: 456 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF--NSILHKSLSSWNAMI 515
Query: 509 SAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGC 568
A HG F L++RM+ +PD +TF+GLL+AC +SG+++ G+ F+ MT+ Y
Sbjct: 516 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 575
Query: 569 QPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAE 628
P EHY CM++LLG +GL EA E++ M ++PD +W LL ACKMH +L E AE
Sbjct: 576 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 635
Query: 629 KLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFR 688
LI +EP N G+Y+LLSNIYA+AG+W+ VAK R+ L +KG+KK+PGCS +EI+ V EF
Sbjct: 636 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 647
Query: 689 VADQTHPRAGDIYTILGNLELEIKE 709
+ D+ HPR +IY +L +E+ +++
Sbjct: 696 IGDKFHPRNREIYGMLEEMEVLLEK 647
BLAST of CsGy1G023930 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 419.9 bits (1078), Expect = 6.0e-116
Identity = 221/678 (32.60%), Postives = 372/678 (54.87%), Query Frame = 0
Query: 31 SLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNL 90
+LL RC+S++ L+QI +G +Q +KL+ + G ++ + +VF +
Sbjct: 41 ALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 91 TLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGY 150
L++ +L+ + + ++ L + +M + P + ++L+ C + + G+ IHG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 151 LVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGI 210
LVK GF L T L MY +C + A ++FD+ +DL +++ QN
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 211 FRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSL 270
+ M E L P T ++L ++ L I + K +H A+ S + ++TA++ +
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 271 YSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTA 330
Y+K SL AR+LFD M E++ V WN MI AY + P E + +F+ M G++ +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 331 LPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTD 390
+ + + A L ++ G+ H + G D VSV NSLI MYC+CK +D+A +F +
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 391 KSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYL 450
++++SW+AMI G+ +NG+ + AL+ FS+M+S ++ D ++++ A + + K++
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 451 HGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHG 510
HG M+ L + TAL+ YAKCG+I +A+ +F + + ++ + WN+MI + HG
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF--DMMSERHVTTWNAMIDGYGTHG 520
Query: 511 DWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHY 570
+L+ M+ KP+ VTFL +++AC +SGLVE G + F M E+Y + S +HY
Sbjct: 521 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 580
Query: 571 ACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEP 630
MV+LLGRAG ++EA + + MP+KP V+G +L AC++H AE AAE+L + P
Sbjct: 581 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNP 640
Query: 631 RNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHP 690
+ G ++LL+NIY AA W+ V ++R + +GL+K PGCS +EI V F HP
Sbjct: 641 DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHP 700
Query: 691 RAGDIYTILGNLELEIKE 709
+ IY L L IKE
Sbjct: 701 DSKKIYAFLEKLICHIKE 716
BLAST of CsGy1G023930 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 403.7 bits (1036), Expect = 4.5e-111
Identity = 235/730 (32.19%), Postives = 403/730 (55.21%), Query Frame = 0
Query: 23 QSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGL---LNHSL 82
QS+ C +I L+ H G + + +KL+ LG L+ +
Sbjct: 28 QSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 83 QVF-CSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSF 142
+VF S ++N+++R G +L++ +M+ + PD+ T+PF L +C+
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 143 SNVGFGRTIHGYLVKLGF--DLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSS 202
G G IHG +VK+G+ DLF V +L Y EC E ++A ++FD+ S +++ +S
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLF--VQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 207
Query: 203 LTTEGPQNDNGEGIFRVFGRMIA-EQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVS 262
+ + D + +F RM+ E++ P+S T ++ A L ++ + V+ S
Sbjct: 208 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 267
Query: 263 KLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELF 322
+ + L+ +A++ +Y K ++ A++LFD+ + + N M + Y R+G E L +F
Sbjct: 268 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 327
Query: 323 KSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCEC 382
M SG+R D + L ISS +QL+ + WGK H ++LRNG +S ++ N+LIDMY +C
Sbjct: 328 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 387
Query: 383 KILDSACKIFNWMTDKSVISWSAMIKGYVKNGQ--------------------------- 442
D+A +IF+ M++K+V++W++++ GYV+NG+
Sbjct: 388 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 447
Query: 443 --SL--TALSLFSKMKS-DGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLP 502
SL A+ +F M+S +G+ AD V M++I A H+GAL+ K+++ Y K G+
Sbjct: 448 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 507
Query: 503 SLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMK 562
L T L+ +++CG E A +F + ++D+ W + I A A G+ + +L++ M
Sbjct: 508 RLGTTLVDMFSRCGDPESAMSIF--NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI 567
Query: 563 CSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLI 622
KPD V F+G LTAC + GLV++GKE F M + +G P HY CMV+LLGRAGL+
Sbjct: 568 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 627
Query: 623 SEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIY 682
EA +L+++MP++P+ +W LL+AC++ ++A +AAEK+ + P G+Y+LLSN+Y
Sbjct: 628 EEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVY 687
Query: 683 AAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLE 714
A+AG+W+ +AK+R ++ KGL+K PG S ++I G EF D++HP + N+E
Sbjct: 688 ASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE-------MPNIE 746
BLAST of CsGy1G023930 vs. ExPASy Swiss-Prot
Match:
Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)
HSP 1 Score: 399.1 bits (1024), Expect = 1.1e-109
Identity = 211/655 (32.21%), Postives = 368/655 (56.18%), Query Frame = 0
Query: 54 GFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVY 113
G N ++S LI Y G ++ ++F V+ + ++N +L + G + + +
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 114 QQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEEC 173
M + P+ T+ VL C+S + G +HG +V G D + +L MY +C
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 174 IEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLL 233
F++A +LF S D + + + Q+ E F MI+ ++PD+ TF +LL
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 234 RFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRV 293
++ +++ K +HC + +S D+ + +A++ Y K R + A+ +F + D V
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 294 VWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHI 353
V+ MI+ Y G + LE+F+ + + I + T + ++ I L + G++ H I
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 467
Query: 354 LRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTAL 413
++ G D++ ++ ++IDMY +C ++ A +IF ++ + ++SW++MI ++ A+
Sbjct: 468 IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAI 527
Query: 414 SLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITY 473
+F +M GI D V + L A ++ + K +HG+ +K L S + L+ Y
Sbjct: 528 DIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMY 587
Query: 474 AKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRM-KCSNSKPDQV 533
AKCG+++ A +F+ K +K+++ WNS+I+A NHG L++ M + S +PDQ+
Sbjct: 588 AKCGNLKAAMNVFKTMK--EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQI 647
Query: 534 TFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKN 593
TFL ++++C + G V++G FF+ MTE YG QP QEHYAC+V+L GRAG ++EA E VK+
Sbjct: 648 TFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 707
Query: 594 MPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGV 653
MP PDA VWG LL AC++H +LAE A+ KL++++P N+G Y+L+SN +A A +W+ V
Sbjct: 708 MPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESV 767
Query: 654 AKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIK 708
K+RS ++ + ++KIPG SW+EIN F D HP + IY++L +L E++
Sbjct: 768 TKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
BLAST of CsGy1G023930 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 396.4 bits (1017), Expect = 7.1e-109
Identity = 222/670 (33.13%), Postives = 366/670 (54.63%), Query Frame = 0
Query: 53 HGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLV 112
+GF + L SKL Y N G L + +VF V +N ++ L + G+ ++ +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 113 YQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEE 172
+++M++ + D T+ V +S SS +V G +HG+++K GF + V +L Y +
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 173 CIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNL 232
++A ++FD+ + +D+ +S+ N E VF +M+ + D T ++
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 233 LRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDR 292
A I L + VH I + + S + +L +YSK L A+ +F +M ++
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 362
Query: 293 VVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAH 352
V + MIA YAREG E ++LF+ M GI D++T V++ A+ + +D GK+ H
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 422
Query: 353 ILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTA 412
I N + V N+L+DMY +C + A +F+ M K +ISW+ +I GY KN + A
Sbjct: 423 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 482
Query: 413 LSLFS-KMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLI 472
LSLF+ ++ D + +LPA + A + + +HGY M+ G S + +L+
Sbjct: 483 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 542
Query: 473 TYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQ 532
YAKCG++ +A LF++ I KDL+ W MI+ + HG + L+N+M+ + + D+
Sbjct: 543 MYAKCGALLLAHMLFDD--IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADE 602
Query: 533 VTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVK 592
++F+ LL AC +SGLV++G FF M +P+ EHYAC+V++L R G + +A ++
Sbjct: 603 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 662
Query: 593 NMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDG 652
NMPI PDA +WG LL C++H KLAE AEK+ +EP N G Y+L++NIYA A KW+
Sbjct: 663 NMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQ 722
Query: 653 VAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVRE 712
V ++R + +GL+K PGCSW+EI G V F D ++P N+E +++VR
Sbjct: 723 VKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPET-------ENIEAFLRKVRA 782
Query: 713 KSPDTLVNPL 722
+ + +PL
Sbjct: 783 RMIEEGYSPL 783
BLAST of CsGy1G023930 vs. NCBI nr
Match:
XP_008444579.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucumis melo] >KAA0054005.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK20690.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1357 bits (3511), Expect = 0.0
Identity = 680/722 (94.18%), Postives = 694/722 (96.12%), Query Frame = 0
Query: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
MLHL RSKPIIH+PI LNFPATQSRLLNTLSLLF+RCNSIQHLQQIHARFILHGFHQNPT
Sbjct: 1 MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
LSSKLIDCYANLGLL HSLQVFCS+IDPNLTLFNAILRNLTRYGESER LLVYQQMVAKS
Sbjct: 61 LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
Query: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
MHPDEETYPF+ RSCSSFSNVGFGRTIHGYLVKLGFD FDVVATALAEMYE+ I FENAH
Sbjct: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
Query: 181 QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN 240
QLFDKRSVKDLGW SSLTTEG QN NGEGIFRVF RM AEQLVPDS TF NLLRFIAGLN
Sbjct: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
Query: 241 SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA 300
SIQLAKIVHCIAIVSKLSGDLLV TAVLSLYSKLRSLVDAR+LFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
Query: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
AYAREGKP ECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS
Sbjct: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420
QVSVHNSLIDMYCECK+LDSAC IFNWMTDKSVISWSAMIKGYVKNGQSLTA SLFSKMK
Sbjct: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
Query: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480
SDGIQADFV MINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
Query: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
MAQRLFEEE+IDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600
CVNSGL+EKGKEFFKEMTESYGC PSQEH+ACMVNLLGRAGLISEAGELV+NMPIKPDAR
Sbjct: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACKMHPGSKLAEFAAEKLI+MEP+NAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
Query: 661 NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTLVNP 720
NKGLKK PGCS LEING VTEFRVADQTHPRA DIYTILGNLELEIKEVREKS DTLVNP
Sbjct: 661 NKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720
Query: 721 LL 722
LL
Sbjct: 721 LL 722
BLAST of CsGy1G023930 vs. NCBI nr
Match:
XP_038894029.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 1274 bits (3297), Expect = 0.0
Identity = 635/721 (88.07%), Postives = 669/721 (92.79%), Query Frame = 0
Query: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
MLHL RSKP+IHS IF NFPATQSRLLNTLS LF RC+S QHL+QIHARF+LHGFHQNPT
Sbjct: 34 MLHLQRSKPVIHSLIFPNFPATQSRLLNTLSFLFDRCSSRQHLKQIHARFVLHGFHQNPT 93
Query: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
LSSKLIDCYANLGLLN SLQVF S+ +PN T++NAILRNLTRYGE ERTLLVY+QMVAKS
Sbjct: 94 LSSKLIDCYANLGLLNLSLQVFYSITEPNSTIYNAILRNLTRYGECERTLLVYRQMVAKS 153
Query: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
MHPDEETYP VLRSC SFSNVG GR IHGYLVKLGFD FD+VATAL EMYEECI+FE+AH
Sbjct: 154 MHPDEETYPSVLRSCCSFSNVGSGRKIHGYLVKLGFDSFDMVATALGEMYEECIDFESAH 213
Query: 181 QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN 240
QLFDKRSVKDL SS TTE PQN NGEGIF VFGRM EQLV DS TF NLLRFIAG N
Sbjct: 214 QLFDKRSVKDLECWSSFTTEAPQNGNGEGIFGVFGRMRVEQLVTDSLTFINLLRFIAGFN 273
Query: 241 SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA 300
SIQLAKIVHCIAIVSKL GDLLVNTAVLSLYSKL SLVDARKLFDKMPE DRVVWNIMIA
Sbjct: 274 SIQLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLGSLVDARKLFDKMPENDRVVWNIMIA 333
Query: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
AYAREGKPTECL LFKSMARSGIRSD+FTALPVISSI+QLK DWGKQTHA+ILRNGSDS
Sbjct: 334 AYAREGKPTECLALFKSMARSGIRSDMFTALPVISSISQLKYFDWGKQTHAYILRNGSDS 393
Query: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420
QVSV+NSLIDMYCEC ILDSACKIFNWM DK+VISWSAMIKGYVK+G SL ALSLFS MK
Sbjct: 394 QVSVYNSLIDMYCECNILDSACKIFNWMKDKTVISWSAMIKGYVKHGHSLIALSLFSSMK 453
Query: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480
SDGIQ+DF+ +INILPAFVHIG LENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 454 SDGIQSDFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 513
Query: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
MAQR+FEEE+IDDKDLIMWNSMISAHANHGDWSQCFKLYN+MKCSN+KPDQVTFLGLLTA
Sbjct: 514 MAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNTKPDQVTFLGLLTA 573
Query: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600
CVNSGLVEKGKEF KEMTE+YGCQPSQEHYACMVNLLGRAGLI+EAGELV+NMPIKPDAR
Sbjct: 574 CVNSGLVEKGKEFLKEMTENYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 633
Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACK+HPGSKLAEFAAEKL++MEP+NAGNYILLSNIYAAAGKWD VAKMRSFLR
Sbjct: 634 VWGPLLSACKLHPGSKLAEFAAEKLVDMEPKNAGNYILLSNIYAAAGKWDEVAKMRSFLR 693
Query: 661 NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTLVNP 720
+KGLKK PGCSWLEINGHVTEFRVADQTHPRA DIYTILGNLELEIKE REKS + L NP
Sbjct: 694 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEAREKSLEKLGNP 753
BLAST of CsGy1G023930 vs. NCBI nr
Match:
XP_004145299.2 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucumis sativus])
HSP 1 Score: 1220 bits (3156), Expect = 0.0
Identity = 607/607 (100.00%), Postives = 607/607 (100.00%), Query Frame = 0
Query: 116 MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIE 175
MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIE
Sbjct: 1 MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIE 60
Query: 176 FENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRF 235
FENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRF
Sbjct: 61 FENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRF 120
Query: 236 IAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVW 295
IAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVW
Sbjct: 121 IAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVW 180
Query: 296 NIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILR 355
NIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILR
Sbjct: 181 NIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILR 240
Query: 356 NGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSL 415
NGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSL
Sbjct: 241 NGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSL 300
Query: 416 FSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAK 475
FSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAK
Sbjct: 301 FSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAK 360
Query: 476 CGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFL 535
CGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFL
Sbjct: 361 CGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFL 420
Query: 536 GLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPI 595
GLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPI
Sbjct: 421 GLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPI 480
Query: 596 KPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKM 655
KPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKM
Sbjct: 481 KPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKM 540
Query: 656 RSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPD 715
RSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPD
Sbjct: 541 RSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPD 600
Query: 716 TLVNPLL 722
TLVNPLL
Sbjct: 601 TLVNPLL 607
BLAST of CsGy1G023930 vs. NCBI nr
Match:
XP_022139869.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Momordica charantia])
HSP 1 Score: 1185 bits (3065), Expect = 0.0
Identity = 593/717 (82.71%), Postives = 640/717 (89.26%), Query Frame = 0
Query: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
MLHL RSKPI F NFPATQSR LNTLS LFSRC+S Q L+QIHARFILHG HQNP
Sbjct: 1 MLHLQRSKPIFRFE-FSNFPATQSRPLNTLSFLFSRCSSRQQLEQIHARFILHGLHQNPA 60
Query: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
LS +LID YANLGLL S QVF S+IDP TL++AILRNL+ +GE ERTLLVY++M AKS
Sbjct: 61 LSCELIDSYANLGLLTLSQQVFNSIIDPTSTLYSAILRNLSSFGEYERTLLVYREMFAKS 120
Query: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
MHPDEETYP VLRSC SNV +GR IHG+LVKLG DL+D ATALAEMY +CI FEN H
Sbjct: 121 MHPDEETYPSVLRSCCCLSNVEYGRKIHGHLVKLGVDLYDSTATALAEMYRKCIGFENGH 180
Query: 181 QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN 240
LFDK +KD +SL +E QN NG+ IF++FGRM EQLV DS TF NLLR I GLN
Sbjct: 181 DLFDKMPMKDFECWNSLNSEASQNGNGDEIFQLFGRMRTEQLVSDSLTFINLLRSIVGLN 240
Query: 241 SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA 300
SIQLAKIVHC+AI S L GDLLVNTAVLSLYSKL LV+ARKLFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCVAITSNLCGDLLVNTAVLSLYSKLGCLVNARKLFDKMPEKDRVVWNIMIA 300
Query: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
AY REG P ECLELFKSMARSGIR+DLFTALPVISSI+QLKCVDWGKQTHAH LRNGSD+
Sbjct: 301 AYDREGNPAECLELFKSMARSGIRADLFTALPVISSISQLKCVDWGKQTHAHTLRNGSDN 360
Query: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420
QVSVHNSLIDMYCE ILDSACKIF+WMT+K+VISWSAMIKG VK+GQSL ALSLFS+MK
Sbjct: 361 QVSVHNSLIDMYCELNILDSACKIFSWMTNKTVISWSAMIKGCVKHGQSLNALSLFSRMK 420
Query: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480
SDGIQADF+ +INILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 421 SDGIQADFITVINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480
Query: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
MAQRLFEEE++DDKDLIMWNSMISAHANHGDWSQCFK+YN+MKCSNS+PDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKIYNQMKCSNSRPDQVTFLGLLTA 540
Query: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600
CVNSGLVEKGKE FKEM E+YGCQPSQEHYACMVNLLGRAGLI++AG LV+NMPIKPDAR
Sbjct: 541 CVNSGLVEKGKECFKEMIENYGCQPSQEHYACMVNLLGRAGLINDAGALVRNMPIKPDAR 600
Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACK+HPGSKLAEFAAEKLI+MEP+NAGNYILLSNIYAAAGKWDGVAKMRSFLR
Sbjct: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
Query: 661 NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTL 717
+KGLKK PGCSWLEINGHVTEFRVAD+THPRA DIYTILGNLELEIKE REKSP+ L
Sbjct: 661 DKGLKKTPGCSWLEINGHVTEFRVADRTHPRAEDIYTILGNLELEIKEAREKSPEKL 716
BLAST of CsGy1G023930 vs. NCBI nr
Match:
KAG6573373.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1178 bits (3048), Expect = 0.0
Identity = 590/717 (82.29%), Postives = 639/717 (89.12%), Query Frame = 0
Query: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
M HL RSKPI F NFPATQSRLLNTLS LFSRC S Q LQQIHARF+LHGFHQNPT
Sbjct: 1 MFHLQRSKPIFRFK-FPNFPATQSRLLNTLSSLFSRCKSRQQLQQIHARFVLHGFHQNPT 60
Query: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
LS KLIDCYAN GLLN S VF S+IDPN L+NAILRNLTR+GE ERTLLVY++MVAKS
Sbjct: 61 LSCKLIDCYANFGLLNLSHHVFNSIIDPNSALYNAILRNLTRFGEYERTLLVYREMVAKS 120
Query: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
MHPDE+TYPFVLRSC SNV FG+ IHG L+KLG D +D V T L EMYE+CI+FENAH
Sbjct: 121 MHPDEQTYPFVLRSCCCLSNVQFGKNIHGCLIKLGVDSYDTVVTVLVEMYEKCIDFENAH 180
Query: 181 QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN 240
QLFDK SVKDL SSL TE PQN NG+ I R+FGRM +E LV DS TF NLLR ++GL+
Sbjct: 181 QLFDKMSVKDLDCWSSLITEAPQNGNGDDISRLFGRMKSEPLVTDSLTFINLLRSVSGLS 240
Query: 241 SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA 300
SIQLAKIVHCIAIVS L GDLLV+TAVLSLYSKL SLVDARKLF+K+PEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKIPEKDRVVWNIMIA 300
Query: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
AYAREG+P ECLELF+SMARSGIR+DLFTALPVISSI+QLK DWGKQTHA+ILRNGSDS
Sbjct: 301 AYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKRADWGKQTHANILRNGSDS 360
Query: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420
QVSVHNSLIDMYCEC LDSACKIFN +T+K+VISWSAMIKG VK+G L ALSLF +MK
Sbjct: 361 QVSVHNSLIDMYCECNSLDSACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLFFRMK 420
Query: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480
SDGIQADF+ +INI+PAFV IGALENVKYLHGYS+KL LTSLPSLNTALLITYAKCG I+
Sbjct: 421 SDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKCGCID 480
Query: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
MAQRLFEEE++DDKDLIMWNSMISAHANHGDWSQCF LYN+MKCSNS PDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFNLYNQMKCSNSNPDQVTFLGLLTA 540
Query: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600
CVNSGLVEKGKEFFKEM ESY CQPSQEHYACMVNLLGRAGLI+EAGELV+NMPIKPDAR
Sbjct: 541 CVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACK+HPGSKLAEFAAEKLI+MEP+NAGNYILLSNIYAAAGKWDGVAKMRSFLR
Sbjct: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
Query: 661 NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTL 717
+KGLKK PGCSWLEING V EFRVAD+THPRA DIY ILGNLEL+IKE +E SP+ L
Sbjct: 661 DKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEKL 716
BLAST of CsGy1G023930 vs. ExPASy TrEMBL
Match:
A0A0A0M0Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534720 PE=4 SV=1)
HSP 1 Score: 1449 bits (3752), Expect = 0.0
Identity = 722/722 (100.00%), Postives = 722/722 (100.00%), Query Frame = 0
Query: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT
Sbjct: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS
Sbjct: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
Query: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH
Sbjct: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
Query: 181 QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN 240
QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN
Sbjct: 181 QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN 240
Query: 241 SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA 300
SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA 300
Query: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS
Sbjct: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420
QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK
Sbjct: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420
Query: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480
SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE
Sbjct: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480
Query: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600
CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR
Sbjct: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600
Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
Query: 661 NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTLVNP 720
NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTLVNP
Sbjct: 661 NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTLVNP 720
Query: 721 LL 722
LL
Sbjct: 721 LL 722
BLAST of CsGy1G023930 vs. ExPASy TrEMBL
Match:
A0A5D3DB69 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00810 PE=4 SV=1)
HSP 1 Score: 1357 bits (3511), Expect = 0.0
Identity = 680/722 (94.18%), Postives = 694/722 (96.12%), Query Frame = 0
Query: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
MLHL RSKPIIH+PI LNFPATQSRLLNTLSLLF+RCNSIQHLQQIHARFILHGFHQNPT
Sbjct: 1 MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
LSSKLIDCYANLGLL HSLQVFCS+IDPNLTLFNAILRNLTRYGESER LLVYQQMVAKS
Sbjct: 61 LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
Query: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
MHPDEETYPF+ RSCSSFSNVGFGRTIHGYLVKLGFD FDVVATALAEMYE+ I FENAH
Sbjct: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
Query: 181 QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN 240
QLFDKRSVKDLGW SSLTTEG QN NGEGIFRVF RM AEQLVPDS TF NLLRFIAGLN
Sbjct: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
Query: 241 SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA 300
SIQLAKIVHCIAIVSKLSGDLLV TAVLSLYSKLRSLVDAR+LFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
Query: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
AYAREGKP ECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS
Sbjct: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420
QVSVHNSLIDMYCECK+LDSAC IFNWMTDKSVISWSAMIKGYVKNGQSLTA SLFSKMK
Sbjct: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
Query: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480
SDGIQADFV MINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
Query: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
MAQRLFEEE+IDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600
CVNSGL+EKGKEFFKEMTESYGC PSQEH+ACMVNLLGRAGLISEAGELV+NMPIKPDAR
Sbjct: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACKMHPGSKLAEFAAEKLI+MEP+NAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
Query: 661 NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTLVNP 720
NKGLKK PGCS LEING VTEFRVADQTHPRA DIYTILGNLELEIKEVREKS DTLVNP
Sbjct: 661 NKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720
Query: 721 LL 722
LL
Sbjct: 721 LL 722
BLAST of CsGy1G023930 vs. ExPASy TrEMBL
Match:
A0A1S3BBG7 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487849 PE=4 SV=1)
HSP 1 Score: 1357 bits (3511), Expect = 0.0
Identity = 680/722 (94.18%), Postives = 694/722 (96.12%), Query Frame = 0
Query: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
MLHL RSKPIIH+PI LNFPATQSRLLNTLSLLF+RCNSIQHLQQIHARFILHGFHQNPT
Sbjct: 1 MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
LSSKLIDCYANLGLL HSLQVFCS+IDPNLTLFNAILRNLTRYGESER LLVYQQMVAKS
Sbjct: 61 LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
Query: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
MHPDEETYPF+ RSCSSFSNVGFGRTIHGYLVKLGFD FDVVATALAEMYE+ I FENAH
Sbjct: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
Query: 181 QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN 240
QLFDKRSVKDLGW SSLTTEG QN NGEGIFRVF RM AEQLVPDS TF NLLRFIAGLN
Sbjct: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
Query: 241 SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA 300
SIQLAKIVHCIAIVSKLSGDLLV TAVLSLYSKLRSLVDAR+LFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
Query: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
AYAREGKP ECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS
Sbjct: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420
QVSVHNSLIDMYCECK+LDSAC IFNWMTDKSVISWSAMIKGYVKNGQSLTA SLFSKMK
Sbjct: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
Query: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480
SDGIQADFV MINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
Query: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
MAQRLFEEE+IDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600
CVNSGL+EKGKEFFKEMTESYGC PSQEH+ACMVNLLGRAGLISEAGELV+NMPIKPDAR
Sbjct: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACKMHPGSKLAEFAAEKLI+MEP+NAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
Query: 661 NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTLVNP 720
NKGLKK PGCS LEING VTEFRVADQTHPRA DIYTILGNLELEIKEVREKS DTLVNP
Sbjct: 661 NKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720
Query: 721 LL 722
LL
Sbjct: 721 LL 722
BLAST of CsGy1G023930 vs. ExPASy TrEMBL
Match:
A0A6J1CE61 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111010677 PE=4 SV=1)
HSP 1 Score: 1185 bits (3065), Expect = 0.0
Identity = 593/717 (82.71%), Postives = 640/717 (89.26%), Query Frame = 0
Query: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
MLHL RSKPI F NFPATQSR LNTLS LFSRC+S Q L+QIHARFILHG HQNP
Sbjct: 1 MLHLQRSKPIFRFE-FSNFPATQSRPLNTLSFLFSRCSSRQQLEQIHARFILHGLHQNPA 60
Query: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
LS +LID YANLGLL S QVF S+IDP TL++AILRNL+ +GE ERTLLVY++M AKS
Sbjct: 61 LSCELIDSYANLGLLTLSQQVFNSIIDPTSTLYSAILRNLSSFGEYERTLLVYREMFAKS 120
Query: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
MHPDEETYP VLRSC SNV +GR IHG+LVKLG DL+D ATALAEMY +CI FEN H
Sbjct: 121 MHPDEETYPSVLRSCCCLSNVEYGRKIHGHLVKLGVDLYDSTATALAEMYRKCIGFENGH 180
Query: 181 QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN 240
LFDK +KD +SL +E QN NG+ IF++FGRM EQLV DS TF NLLR I GLN
Sbjct: 181 DLFDKMPMKDFECWNSLNSEASQNGNGDEIFQLFGRMRTEQLVSDSLTFINLLRSIVGLN 240
Query: 241 SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA 300
SIQLAKIVHC+AI S L GDLLVNTAVLSLYSKL LV+ARKLFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCVAITSNLCGDLLVNTAVLSLYSKLGCLVNARKLFDKMPEKDRVVWNIMIA 300
Query: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
AY REG P ECLELFKSMARSGIR+DLFTALPVISSI+QLKCVDWGKQTHAH LRNGSD+
Sbjct: 301 AYDREGNPAECLELFKSMARSGIRADLFTALPVISSISQLKCVDWGKQTHAHTLRNGSDN 360
Query: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420
QVSVHNSLIDMYCE ILDSACKIF+WMT+K+VISWSAMIKG VK+GQSL ALSLFS+MK
Sbjct: 361 QVSVHNSLIDMYCELNILDSACKIFSWMTNKTVISWSAMIKGCVKHGQSLNALSLFSRMK 420
Query: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480
SDGIQADF+ +INILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 421 SDGIQADFITVINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480
Query: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
MAQRLFEEE++DDKDLIMWNSMISAHANHGDWSQCFK+YN+MKCSNS+PDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKIYNQMKCSNSRPDQVTFLGLLTA 540
Query: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600
CVNSGLVEKGKE FKEM E+YGCQPSQEHYACMVNLLGRAGLI++AG LV+NMPIKPDAR
Sbjct: 541 CVNSGLVEKGKECFKEMIENYGCQPSQEHYACMVNLLGRAGLINDAGALVRNMPIKPDAR 600
Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACK+HPGSKLAEFAAEKLI+MEP+NAGNYILLSNIYAAAGKWDGVAKMRSFLR
Sbjct: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
Query: 661 NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTL 717
+KGLKK PGCSWLEINGHVTEFRVAD+THPRA DIYTILGNLELEIKE REKSP+ L
Sbjct: 661 DKGLKKTPGCSWLEINGHVTEFRVADRTHPRAEDIYTILGNLELEIKEAREKSPEKL 716
BLAST of CsGy1G023930 vs. ExPASy TrEMBL
Match:
A0A6J1K3Q8 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111490383 PE=4 SV=1)
HSP 1 Score: 1177 bits (3045), Expect = 0.0
Identity = 591/721 (81.97%), Postives = 641/721 (88.90%), Query Frame = 0
Query: 1 MLHLHRSKPIIHSPIFL----NFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFH 60
M HL RSK I SPIF NFPATQSRLLNTLS LFSRC S Q L+QIHARF+LHGFH
Sbjct: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
Query: 61 QNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQM 120
QNPTLS KLIDCYAN GLLN S VF S+IDPN TL+NAILRNLTR+GE ERTLLVY++M
Sbjct: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
Query: 121 VAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEF 180
VAKSMHPDE+TYPFVL+SC SNV FG+ IHG L+KLG D +D V T LAEMY +CI+F
Sbjct: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
Query: 181 ENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFI 240
ENAHQLFDK SVKDL SSL +E PQN NG+ I + GRM +E LV DS TF NLLR I
Sbjct: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
Query: 241 AGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWN 300
+GL+SIQLAKIVHCIAIVS L GDLLV+TAVLSLYSKL SLVDARKLF+KMPEKDRVVWN
Sbjct: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
Query: 301 IMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRN 360
IMIAAYAREG+P ECLELF+SMARSGIR+DLFTALPVISSI+QLKC DWGKQTHA+ILRN
Sbjct: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
Query: 361 GSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLF 420
GSDSQVSVHNSLIDMYCEC L+SACKIFN +T+K+VISWSAMIKG VK+G L ALSLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
Query: 421 SKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKC 480
MKSDGIQADF+ +INI+PAFV IGALENVKYLHGYS+KL LTSLPSLNTALLITYAKC
Sbjct: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
Query: 481 GSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLG 540
G IEMAQRLFEEE+++DKDLIMWNSMISAHANHGDWSQCFKLYN+MKCSNS PDQVTFLG
Sbjct: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
Query: 541 LLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIK 600
LLTACVNSGLVEKGKEFFKEM ESY CQPSQEHYACMVNLLGRAGLI+EAGELV+NMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
Query: 601 PDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACK+HPGSKLAEFAAEKLI+MEP+NAGNYILLSNIYAAAGKWDGVAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
Query: 661 SFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDT 717
SFLR+KGLKK PGCSWLEING V EFRVAD+THPRA DIY ILGNLEL+IKE +E SP+
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
BLAST of CsGy1G023930 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 436.4 bits (1121), Expect = 4.4e-122
Identity = 250/685 (36.50%), Postives = 379/685 (55.33%), Query Frame = 0
Query: 29 TLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLID-CYANLGL--LNHSLQVFCSV 88
+LSLL + C ++Q L+ IHA+ I G H SKLI+ C + L +++ VF ++
Sbjct: 36 SLSLLHN-CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 95
Query: 89 IDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGR 148
+PNL ++N + R + L +Y M++ + P+ T+PFVL+SC+ G+
Sbjct: 96 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 155
Query: 149 TIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQND 208
IHG+++KLG DL V T+L MY + E+AH++FDK +
Sbjct: 156 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR---------------- 215
Query: 209 NGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNT 268
D++ T
Sbjct: 216 ------------------------------------------------------DVVSYT 275
Query: 269 AVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRS 328
A++ Y+ + +A+KLFD++P KD V WN MI+ YA G E LELFK M ++ +R
Sbjct: 276 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 335
Query: 329 DLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIF 388
D T + V+S+ AQ ++ G+Q H I +G S + + N+LID+Y +C L++AC +F
Sbjct: 336 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 395
Query: 389 NWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALE 448
+ K VISW+ +I GY AL LF +M G + V M++ILPA H+GA++
Sbjct: 396 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 455
Query: 449 NVKYLHGYSMK--LGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMI 508
+++H Y K G+T+ SL T+L+ YAKCG IE A ++F I K L WN+MI
Sbjct: 456 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF--NSILHKSLSSWNAMI 515
Query: 509 SAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGC 568
A HG F L++RM+ +PD +TF+GLL+AC +SG+++ G+ F+ MT+ Y
Sbjct: 516 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 575
Query: 569 QPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAE 628
P EHY CM++LLG +GL EA E++ M ++PD +W LL ACKMH +L E AE
Sbjct: 576 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 635
Query: 629 KLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFR 688
LI +EP N G+Y+LLSNIYA+AG+W+ VAK R+ L +KG+KK+PGCS +EI+ V EF
Sbjct: 636 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 647
Query: 689 VADQTHPRAGDIYTILGNLELEIKE 709
+ D+ HPR +IY +L +E+ +++
Sbjct: 696 IGDKFHPRNREIYGMLEEMEVLLEK 647
BLAST of CsGy1G023930 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 419.9 bits (1078), Expect = 4.3e-117
Identity = 221/678 (32.60%), Postives = 372/678 (54.87%), Query Frame = 0
Query: 31 SLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNL 90
+LL RC+S++ L+QI +G +Q +KL+ + G ++ + +VF +
Sbjct: 41 ALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 91 TLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGY 150
L++ +L+ + + ++ L + +M + P + ++L+ C + + G+ IHG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 151 LVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGI 210
LVK GF L T L MY +C + A ++FD+ +DL +++ QN
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 211 FRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSL 270
+ M E L P T ++L ++ L I + K +H A+ S + ++TA++ +
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 271 YSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTA 330
Y+K SL AR+LFD M E++ V WN MI AY + P E + +F+ M G++ +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 331 LPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTD 390
+ + + A L ++ G+ H + G D VSV NSLI MYC+CK +D+A +F +
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 391 KSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYL 450
++++SW+AMI G+ +NG+ + AL+ FS+M+S ++ D ++++ A + + K++
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 451 HGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHG 510
HG M+ L + TAL+ YAKCG+I +A+ +F + + ++ + WN+MI + HG
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF--DMMSERHVTTWNAMIDGYGTHG 520
Query: 511 DWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHY 570
+L+ M+ KP+ VTFL +++AC +SGLVE G + F M E+Y + S +HY
Sbjct: 521 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 580
Query: 571 ACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEP 630
MV+LLGRAG ++EA + + MP+KP V+G +L AC++H AE AAE+L + P
Sbjct: 581 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNP 640
Query: 631 RNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHP 690
+ G ++LL+NIY AA W+ V ++R + +GL+K PGCS +EI V F HP
Sbjct: 641 DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHP 700
Query: 691 RAGDIYTILGNLELEIKE 709
+ IY L L IKE
Sbjct: 701 DSKKIYAFLEKLICHIKE 716
BLAST of CsGy1G023930 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 403.7 bits (1036), Expect = 3.2e-112
Identity = 235/730 (32.19%), Postives = 403/730 (55.21%), Query Frame = 0
Query: 23 QSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGL---LNHSL 82
QS+ C +I L+ H G + + +KL+ LG L+ +
Sbjct: 28 QSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 83 QVF-CSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSF 142
+VF S ++N+++R G +L++ +M+ + PD+ T+PF L +C+
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 143 SNVGFGRTIHGYLVKLGF--DLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSS 202
G G IHG +VK+G+ DLF V +L Y EC E ++A ++FD+ S +++ +S
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLF--VQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 207
Query: 203 LTTEGPQNDNGEGIFRVFGRMIA-EQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVS 262
+ + D + +F RM+ E++ P+S T ++ A L ++ + V+ S
Sbjct: 208 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 267
Query: 263 KLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELF 322
+ + L+ +A++ +Y K ++ A++LFD+ + + N M + Y R+G E L +F
Sbjct: 268 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 327
Query: 323 KSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCEC 382
M SG+R D + L ISS +QL+ + WGK H ++LRNG +S ++ N+LIDMY +C
Sbjct: 328 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 387
Query: 383 KILDSACKIFNWMTDKSVISWSAMIKGYVKNGQ--------------------------- 442
D+A +IF+ M++K+V++W++++ GYV+NG+
Sbjct: 388 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 447
Query: 443 --SL--TALSLFSKMKS-DGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLP 502
SL A+ +F M+S +G+ AD V M++I A H+GAL+ K+++ Y K G+
Sbjct: 448 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 507
Query: 503 SLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMK 562
L T L+ +++CG E A +F + ++D+ W + I A A G+ + +L++ M
Sbjct: 508 RLGTTLVDMFSRCGDPESAMSIF--NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI 567
Query: 563 CSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLI 622
KPD V F+G LTAC + GLV++GKE F M + +G P HY CMV+LLGRAGL+
Sbjct: 568 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 627
Query: 623 SEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIY 682
EA +L+++MP++P+ +W LL+AC++ ++A +AAEK+ + P G+Y+LLSN+Y
Sbjct: 628 EEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVY 687
Query: 683 AAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLE 714
A+AG+W+ +AK+R ++ KGL+K PG S ++I G EF D++HP + N+E
Sbjct: 688 ASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE-------MPNIE 746
BLAST of CsGy1G023930 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 403.7 bits (1036), Expect = 3.2e-112
Identity = 235/730 (32.19%), Postives = 403/730 (55.21%), Query Frame = 0
Query: 23 QSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGL---LNHSL 82
QS+ C +I L+ H G + + +KL+ LG L+ +
Sbjct: 28 QSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 83 QVF-CSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSF 142
+VF S ++N+++R G +L++ +M+ + PD+ T+PF L +C+
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 143 SNVGFGRTIHGYLVKLGF--DLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSS 202
G G IHG +VK+G+ DLF V +L Y EC E ++A ++FD+ S +++ +S
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLF--VQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 207
Query: 203 LTTEGPQNDNGEGIFRVFGRMIA-EQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVS 262
+ + D + +F RM+ E++ P+S T ++ A L ++ + V+ S
Sbjct: 208 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 267
Query: 263 KLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELF 322
+ + L+ +A++ +Y K ++ A++LFD+ + + N M + Y R+G E L +F
Sbjct: 268 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 327
Query: 323 KSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCEC 382
M SG+R D + L ISS +QL+ + WGK H ++LRNG +S ++ N+LIDMY +C
Sbjct: 328 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 387
Query: 383 KILDSACKIFNWMTDKSVISWSAMIKGYVKNGQ--------------------------- 442
D+A +IF+ M++K+V++W++++ GYV+NG+
Sbjct: 388 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 447
Query: 443 --SL--TALSLFSKMKS-DGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLP 502
SL A+ +F M+S +G+ AD V M++I A H+GAL+ K+++ Y K G+
Sbjct: 448 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 507
Query: 503 SLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMK 562
L T L+ +++CG E A +F + ++D+ W + I A A G+ + +L++ M
Sbjct: 508 RLGTTLVDMFSRCGDPESAMSIF--NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI 567
Query: 563 CSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLI 622
KPD V F+G LTAC + GLV++GKE F M + +G P HY CMV+LLGRAGL+
Sbjct: 568 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 627
Query: 623 SEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIY 682
EA +L+++MP++P+ +W LL+AC++ ++A +AAEK+ + P G+Y+LLSN+Y
Sbjct: 628 EEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVY 687
Query: 683 AAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLE 714
A+AG+W+ +AK+R ++ KGL+K PG S ++I G EF D++HP + N+E
Sbjct: 688 ASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE-------MPNIE 746
BLAST of CsGy1G023930 vs. TAIR 10
Match:
AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 399.1 bits (1024), Expect = 7.8e-111
Identity = 211/655 (32.21%), Postives = 368/655 (56.18%), Query Frame = 0
Query: 54 GFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVY 113
G N ++S LI Y G ++ ++F V+ + ++N +L + G + + +
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 114 QQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEEC 173
M + P+ T+ VL C+S + G +HG +V G D + +L MY +C
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 174 IEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLL 233
F++A +LF S D + + + Q+ E F MI+ ++PD+ TF +LL
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 234 RFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRV 293
++ +++ K +HC + +S D+ + +A++ Y K R + A+ +F + D V
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 294 VWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHI 353
V+ MI+ Y G + LE+F+ + + I + T + ++ I L + G++ H I
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 467
Query: 354 LRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTAL 413
++ G D++ ++ ++IDMY +C ++ A +IF ++ + ++SW++MI ++ A+
Sbjct: 468 IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAI 527
Query: 414 SLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITY 473
+F +M GI D V + L A ++ + K +HG+ +K L S + L+ Y
Sbjct: 528 DIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMY 587
Query: 474 AKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRM-KCSNSKPDQV 533
AKCG+++ A +F+ K +K+++ WNS+I+A NHG L++ M + S +PDQ+
Sbjct: 588 AKCGNLKAAMNVFKTMK--EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQI 647
Query: 534 TFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKN 593
TFL ++++C + G V++G FF+ MTE YG QP QEHYAC+V+L GRAG ++EA E VK+
Sbjct: 648 TFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 707
Query: 594 MPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGV 653
MP PDA VWG LL AC++H +LAE A+ KL++++P N+G Y+L+SN +A A +W+ V
Sbjct: 708 MPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESV 767
Query: 654 AKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIK 708
K+RS ++ + ++KIPG SW+EIN F D HP + IY++L +L E++
Sbjct: 768 TKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LN01 | 6.2e-121 | 36.50 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q3E6Q1 | 6.0e-116 | 32.60 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9LUJ2 | 4.5e-111 | 32.19 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Q9STE1 | 1.1e-109 | 32.21 | Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... | [more] |
Q9SN39 | 7.1e-109 | 33.13 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Match Name | E-value | Identity | Description | |
XP_008444579.1 | 0.0 | 94.18 | PREDICTED: pentatricopeptide repeat-containing protein At1g11290, chloroplastic-... | [more] |
XP_038894029.1 | 0.0 | 88.07 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Benin... | [more] |
XP_004145299.2 | 0.0 | 100.00 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucumis sa... | [more] |
XP_022139869.1 | 0.0 | 82.71 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Momor... | [more] |
KAG6573373.1 | 0.0 | 82.29 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0M0Z6 | 0.0 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534720 PE=4 SV=1 | [more] |
A0A5D3DB69 | 0.0 | 94.18 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BBG7 | 0.0 | 94.18 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... | [more] |
A0A6J1CE61 | 0.0 | 82.71 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Mom... | [more] |
A0A6J1K3Q8 | 0.0 | 81.97 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
AT1G08070.1 | 4.4e-122 | 36.50 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G11290.1 | 4.3e-117 | 32.60 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G22690.1 | 3.2e-112 | 32.19 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
AT3G22690.2 | 3.2e-112 | 32.19 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
AT4G21300.1 | 7.8e-111 | 32.21 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |