CsGy1G023840 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G023840
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Epidermal patterning factor-like protein
Location	Gy14Chr1: 22545800 .. 22547420 (+)
RNA-Seq Expression	CsGy1G023840
Synteny	CsGy1G023840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTCTCTCTCTCTGCATCCACATATCTCAAAACCATTATTAATTCCCTATAAAAAACAGAGAAATACATATCCAAAGTTTGTGAATCATATTTATTTCATCATTGTTTTAACTTGTTCAAGTAAATCTATATATATTTATAATTTTTTTTGAATATTTCTGCAAATTTTCCTCTGCTGTGAATGGAGTTTAATAGAAGCAGAGTAGTCATTGAGAACAAAACCAACCCTAAACCCATCTTGATCTTGATCTTGATCTTCATCTCCTTCTTCTTCTTCTTGTTTTTAATGGTATTCATATTGTCATCATTCTGTAGCAGCATCATGAGTTCATATAATGGGGATTCAGGTGAGATATCATGATCATAAAGAGAGTTAAATTTTAGCTGGAAAGCTTGATGTACATATATATGTATTTCTTTCTGTGATATCCTGATGGATGTGTGCTGATGTTATGTTCTTCAGATAACACTAGGAGCTGCTCATTTGGTAAATCTGTCCAGGTAATTAATTAAATTTATTTTGACTTTGTTCATGTGTATATGGGGTGATAGTTATTTATTCAGTGTAGATAACTATTGGTAGTTAGAAAATGGGTTAAGTACAGAGTAGATAGCTAGTCAGCTGGATTCATACATTATATACAGTCATATATAATCTATCACATCTCTTCTAAACAAACACATCCATCCATCAATTCCATCATAATCTATCATAAGCTGGCACTGAGATACTGACCCATTATTTGGATGCATCACATAGGTACCTTCACTCTCTCTTTTTAAAATCTAATCTAAGCATTCAATCACAACGTGATCAATTTTGTTTTCTTAACATTTTTCTCTTCAAGATTTAAAAGGGTTATTGCATGAAGAATTTGTGGTGAGAAATGTACCAAGCACATTATCTCTCTTCCAAAATATCTAGATTGGACTATACTTAATAATCTATTTACACACATAAAAAATAGTGAGTTATATTTTTTAAACTTTGAAAGATGTCTCCCTCACTCTATATATTATAGGTTTTTCTTTGCTATATCACCAAAGATTCGAACACTAGCACATACATATATAATTGACTTGGGTGCATTAATGCATACAAGAGTGAGTTTGTTAAGGCCGAAGTTGGTTAAGTTTTGTAGTGGTTTAATATTGACATTTTCAGTACTCCATAATCGCAAATTGTGAAGATGATCATCATCAAGATCAGTTCATGAGATTGCCGAGAAGAGGACTGGGTGGGCCGGGATCATCGCCGCCACGTTGCGCCTCAAAGTGCGGCAAGTGCACGCCCTGCACTGCGGTCCATGTGCCGGTGCCGCCGGGAACTCCGGTGACGGCCGAGTACTACCCGGAAGCATGGAGATGCAAATGTGGGAACAAGCTTTACATGCCGTGATCAACAACCATGAATTTACCGATGGGTACTACTGCCGCTACTGGTGGTGTATGTAATTAAGTTGGGTATGGTATGTGCAAATTACCGCTAACTATTTTCATCTCTGTTTTGTAAAAATAATATATAGATTTATAGCTAATTCTATATATATGTGTGTGTGTTTGTAATTATATTAATATGTAAAAGAGCTATGTGTGTGTTTAATTAACTATGG

mRNA sequence

TCTCTCTCTCTCTCTCTCTCTGCATCCACATATCTCAAAACCATTATTAATTCCCTATAAAAAACAGAGAAATACATATCCAAAGTTTGTGAATCATATTTATTTCATCATTGTTTTAACTTGTTCAAGTAAATCTATATATATTTATAATTTTTTTTGAATATTTCTGCAAATTTTCCTCTGCTGTGAATGGAGTTTAATAGAAGCAGAGTAGTCATTGAGAACAAAACCAACCCTAAACCCATCTTGATCTTGATCTTGATCTTCATCTCCTTCTTCTTCTTCTTGTTTTTAATGGTATTCATATTGTCATCATTCTGTAGCAGCATCATGAGTTCATATAATGGGGATTCAGATAACACTAGGAGCTGCTCATTTGGTAAATCTGTCCAGTACTCCATAATCGCAAATTGTGAAGATGATCATCATCAAGATCAGTTCATGAGATTGCCGAGAAGAGGACTGGGTGGGCCGGGATCATCGCCGCCACGTTGCGCCTCAAAGTGCGGCAAGTGCACGCCCTGCACTGCGGTCCATGTGCCGGTGCCGCCGGGAACTCCGGTGACGGCCGAGTACTACCCGGAAGCATGGAGATGCAAATGTGGGAACAAGCTTTACATGCCGTGATCAACAACCATGAATTTACCGATGGGTACTACTGCCGCTACTGGTGGTGTATGTAATTAAGTTGGGTATGGTATGTGCAAATTACCGCTAACTATTTTCATCTCTGTTTTGTAAAAATAATATATAGATTTATAGCTAATTCTATATATATGTGTGTGTGTTTGTAATTATATTAATATGTAAAAGAGCTATGTGTGTGTTTAATTAACTATGG

Coding sequence (CDS)

ATGGAGTTTAATAGAAGCAGAGTAGTCATTGAGAACAAAACCAACCCTAAACCCATCTTGATCTTGATCTTGATCTTCATCTCCTTCTTCTTCTTCTTGTTTTTAATGGTATTCATATTGTCATCATTCTGTAGCAGCATCATGAGTTCATATAATGGGGATTCAGATAACACTAGGAGCTGCTCATTTGGTAAATCTGTCCAGTACTCCATAATCGCAAATTGTGAAGATGATCATCATCAAGATCAGTTCATGAGATTGCCGAGAAGAGGACTGGGTGGGCCGGGATCATCGCCGCCACGTTGCGCCTCAAAGTGCGGCAAGTGCACGCCCTGCACTGCGGTCCATGTGCCGGTGCCGCCGGGAACTCCGGTGACGGCCGAGTACTACCCGGAAGCATGGAGATGCAAATGTGGGAACAAGCTTTACATGCCGTGA

Protein sequence

MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRSCSFGKSVQYSIIANCEDDHHQDQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP*

Homology

[Close]

BLAST of CsGy1G023840 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.4e-24
Identity = 63/127 (49.61%), Postives = 79/127 (62.20%), Query Frame = 0


Query: 24  LIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRSCSF-----GKSVQYSIIANCEDD 83
           L ++   FF+  ++   +   +S  S YN +S++    +F     GKS           D
Sbjct: 33  LFYLLLLFFVLCVIATFTITPTSTSSPYNRNSNSGTLGNFYAKEEGKSTVVIKKTRKIGD 92

Query: 84  HHQDQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKC 143
             ++  +R   RGL   GSSPPRC+SKCG+CTPC  VHVPVPPGTPVTAEYYPEAWRCKC
Sbjct: 93  RSKEAELRRILRGL---GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKC 152

Query: 144 GNKLYMP 146
           GNKLYMP
Sbjct: 153 GNKLYMP 156

[Close]

BLAST of CsGy1G023840 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.6e-21
Identity = 43/62 (69.35%), Postives = 48/62 (77.42%), Query Frame = 0


Query: 84  FMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 143
           F+R  +R  GGPGSSPP C SKCGKC PC  VHVP+ PG  +  EYYPEAWRCKCGNKL+
Sbjct: 49  FIRSNKR-FGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLF 108

Query: 144 MP 146
           MP
Sbjct: 109 MP 109

[Close]

BLAST of CsGy1G023840 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.8e-20
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 89  RRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 146
           ++ LGGPGS PP C  KCGKC PC AVHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 51  QKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CsGy1G023840 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05
Identity = 22/47 (46.81%), Postives = 25/47 (53.19%), Query Frame = 0


Query: 96  GSSPPRCASKCGKCTPCTAVHVP----VPPGTPVTAEYYPEAWRCKC 139
           GS PP C  KC  C PC A+  P    +P  +P  A Y PE WRC C
Sbjct: 58  GSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSPHYANYQPEGWRCHC 104

[Close]

BLAST of CsGy1G023840 vs. ExPASy Swiss-Prot
Match: P43212 (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 5.6e-05
Identity = 23/50 (46.00%), Postives = 27/50 (54.00%), Query Frame = 0


Query: 96  GSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 146
           GS PP C +KC  C+PC A  V V    P   EYYP+ W C    K+Y P
Sbjct: 467 GSRPPNCTNKCHGCSPCKAKLVIVHRIMP--QEYYPQRWMCSRHGKIYHP 514

[Close]

BLAST of CsGy1G023840 vs. NCBI nr
Match: XP_011658830.1 (EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis sativus] >KGN65854.1 hypothetical protein Csa_023188 [Cucumis sativus])

HSP 1 Score: 301 bits (771), Expect = 3.21e-103
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRS 60
           MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRS
Sbjct: 1   MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRS 60

Query: 61  CSFGKSVQYSIIANCEDDHHQDQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVP 120
           CSFGKSVQYSIIANCEDDHHQDQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVP
Sbjct: 61  CSFGKSVQYSIIANCEDDHHQDQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVP 120

Query: 121 PGTPVTAEYYPEAWRCKCGNKLYMP 145
           PGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 PGTPVTAEYYPEAWRCKCGNKLYMP 145

[Close]

BLAST of CsGy1G023840 vs. NCBI nr
Match: KAA0060006.1 (EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis melo var. makuwa] >TYJ97264.1 EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 210 bits (534), Expect = 1.26e-67
Identity = 99/110 (90.00%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 36  MVFILSSFCSSIMSSYNGDSDNTRSCSFGKSVQYSIIANCEDDHHQDQFMRLPRRGLGGP 95
           MVFILSSFCSSI SS NGDSDNTRSCSF ++VQY +IANCED   QDQFMRLPRRGLGGP
Sbjct: 1   MVFILSSFCSSIRSSSNGDSDNTRSCSFVEAVQYPMIANCED---QDQFMRLPRRGLGGP 60

Query: 96  GSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 145
           GSSPPRC SKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 61  GSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 107

[Close]

BLAST of CsGy1G023840 vs. NCBI nr
Match: XP_038895367.1 (EPIDERMAL PATTERNING FACTOR-like protein 6 [Benincasa hispida])

HSP 1 Score: 186 bits (473), Expect = 6.11e-58
Identity = 104/149 (69.80%), Postives = 113/149 (75.84%), Query Frame = 0


Query: 1   MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVF-ILSSFCSSIMSSYNGDSDNTR 60
           MEFNR+RVV ENKT  KPI+     F  FFFFLFLM+F IL SFCSSI+SS    SDN R
Sbjct: 1   MEFNRNRVVSENKTTHKPIIF----FFFFFFFLFLMLFFILLSFCSSIISS----SDNIR 60

Query: 61  ---SCSFGKSVQYSIIANCEDDHHQDQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVH 120
              S   G+  QYSI       +++DQ + LPRRGLGG GSSPPRCASKCGKCTPCTAVH
Sbjct: 61  RFSSAKGGQHYQYSIA------NYEDQELSLPRRGLGGLGSSPPRCASKCGKCTPCTAVH 120

Query: 121 VPVPPGTPVTAEYYPEAWRCKCGNKLYMP 145
           VPV PGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 VPVSPGTPVTAEYYPEAWRCKCGNKLYMP 135

[Close]

BLAST of CsGy1G023840 vs. NCBI nr
Match: XP_023525346.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141 bits (356), Expect = 5.97e-40
Identity = 84/162 (51.85%), Postives = 98/162 (60.49%), Query Frame = 0


Query: 1   MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDN--- 60
           ME +R+ +  E KT  K            F FLFL +F++S +CS I S+ N    +   
Sbjct: 1   MELSRNTLT-ETKTAHKS-----------FSFLFLFLFLISFWCSMISSADNRCCSSAKA 60

Query: 61  --------TRSCSF-----GKSVQYSIIANCEDDHHQDQFMR-LPRRGLGGPGSSPPRCA 120
                   T S ++     G+ V     A      H+DQ +R L RR LGGPGSSPPRCA
Sbjct: 61  GHTNLQPITSSATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCA 120

Query: 121 SKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 145
           S CGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 SMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 150

[Close]

BLAST of CsGy1G023840 vs. NCBI nr
Match: XP_023525345.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 140 bits (353), Expect = 1.81e-39
Identity = 84/168 (50.00%), Postives = 96/168 (57.14%), Query Frame = 0


Query: 1   MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRS 60
           ME +R+ +  E KT  K            F FLFL +F++S +CS I S+      + R 
Sbjct: 1   MELSRNTLT-ETKTAHKS-----------FSFLFLFLFLISFWCSMISSA----GPDNRC 60

Query: 61  CSF----------------------GKSVQYSIIANCEDDHHQDQFMR-LPRRGLGGPGS 120
           CS                       G+ V     A      H+DQ +R L RR LGGPGS
Sbjct: 61  CSSAKAGHTNLQPITSSATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGS 120

Query: 121 SPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 145
           SPPRCAS CGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 SPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152

[Close]

BLAST of CsGy1G023840 vs. ExPASy TrEMBL
Match: A0A0A0LXR9 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G533610 PE=3 SV=1)

HSP 1 Score: 301 bits (771), Expect = 1.56e-103
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRS 60
           MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRS
Sbjct: 1   MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRS 60

Query: 61  CSFGKSVQYSIIANCEDDHHQDQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVP 120
           CSFGKSVQYSIIANCEDDHHQDQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVP
Sbjct: 61  CSFGKSVQYSIIANCEDDHHQDQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVP 120

Query: 121 PGTPVTAEYYPEAWRCKCGNKLYMP 145
           PGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 PGTPVTAEYYPEAWRCKCGNKLYMP 145

[Close]

BLAST of CsGy1G023840 vs. ExPASy TrEMBL
Match: A0A5D3BE35 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00580 PE=3 SV=1)

HSP 1 Score: 210 bits (534), Expect = 6.10e-68
Identity = 99/110 (90.00%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 36  MVFILSSFCSSIMSSYNGDSDNTRSCSFGKSVQYSIIANCEDDHHQDQFMRLPRRGLGGP 95
           MVFILSSFCSSI SS NGDSDNTRSCSF ++VQY +IANCED   QDQFMRLPRRGLGGP
Sbjct: 1   MVFILSSFCSSIRSSSNGDSDNTRSCSFVEAVQYPMIANCED---QDQFMRLPRRGLGGP 60

Query: 96  GSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 145
           GSSPPRC SKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 61  GSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 107

[Close]

BLAST of CsGy1G023840 vs. ExPASy TrEMBL
Match: A0A6J1KAS0 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492606 PE=3 SV=1)

HSP 1 Score: 137 bits (345), Expect = 1.35e-38
Identity = 83/162 (51.23%), Postives = 96/162 (59.26%), Query Frame = 0


Query: 1   MEFNRSRVVIENKTNPKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDN--- 60
           ME +R+ +  E KT  K            F FLFL + ++S  CS I S+ N    +   
Sbjct: 1   MELSRNTLT-ETKTAHKS-----------FSFLFLFLILISFSCSMISSADNRCCSSAKA 60

Query: 61  --------TRSCSF-----GKSVQYSIIANCEDDHHQDQFMR-LPRRGLGGPGSSPPRCA 120
                   T S ++     G+ V     A      H+DQ +R L RR LGGPGSSPPRCA
Sbjct: 61  GHTNLQPITSSATWKLPADGRRVAQPNAAEVVVGDHEDQELRTLARRELGGPGSSPPRCA 120

Query: 121 SKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 145
           S CGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 SMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 150

[Close]

BLAST of CsGy1G023840 vs. ExPASy TrEMBL
Match: A0A6J1KCE5 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492606 PE=3 SV=1)

HSP 1 Score: 136 bits (343), Expect = 2.87e-38
Identity = 68/108 (62.96%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 44  CSSIMSSYNGDSDNTRSCSF-----GKSVQYSIIANCEDDHHQDQFMR-LPRRGLGGPGS 103
           CSS  + +      T S ++     G+ V     A      H+DQ +R L RR LGGPGS
Sbjct: 45  CSSAKAGHTNLQPITSSATWKLPADGRRVAQPNAAEVVVGDHEDQELRTLARRELGGPGS 104

Query: 104 SPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 145
           SPPRCAS CGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 105 SPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152

[Close]

BLAST of CsGy1G023840 vs. ExPASy TrEMBL
Match: A0A6J1G964 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452110 PE=3 SV=1)

HSP 1 Score: 135 bits (341), Expect = 5.78e-38
Identity = 67/108 (62.04%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 44  CSSIMSSYNGDSDNTRSCSF-----GKSVQYSIIANCEDDHHQDQFMR-LPRRGLGGPGS 103
           CSS  + +      T S ++     G+ V     A      H+DQ +R L RR LGGPGS
Sbjct: 45  CSSAKAGHTNLQPITSSATWKLPADGRRVAQPATAEVVVGDHEDQELRTLARRELGGPGS 104

Query: 104 SPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 145
           SPPRC S CGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 105 SPPRCTSMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152

[Close]

BLAST of CsGy1G023840 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 117.5 bits (293), Expect = 9.2e-27
Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = 0


Query: 89  RRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 146
           RR L G GSSPPRC+SKCG+CTPC  VHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 174 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230

[Close]

BLAST of CsGy1G023840 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-25
Identity = 63/127 (49.61%), Postives = 79/127 (62.20%), Query Frame = 0


Query: 24  LIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRSCSF-----GKSVQYSIIANCEDD 83
           L ++   FF+  ++   +   +S  S YN +S++    +F     GKS           D
Sbjct: 33  LFYLLLLFFVLCVIATFTITPTSTSSPYNRNSNSGTLGNFYAKEEGKSTVVIKKTRKIGD 92

Query: 84  HHQDQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKC 143
             ++  +R   RGL   GSSPPRC+SKCG+CTPC  VHVPVPPGTPVTAEYYPEAWRCKC
Sbjct: 93  RSKEAELRRILRGL---GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKC 152

Query: 144 GNKLYMP 146
           GNKLYMP
Sbjct: 153 GNKLYMP 156

[Close]

BLAST of CsGy1G023840 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 4.0e-22
Identity = 43/62 (69.35%), Postives = 48/62 (77.42%), Query Frame = 0


Query: 84  FMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 143
           F+R  +R  GGPGSSPP C SKCGKC PC  VHVP+ PG  +  EYYPEAWRCKCGNKL+
Sbjct: 49  FIRSNKR-FGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLF 108

Query: 144 MP 146
           MP
Sbjct: 109 MP 109

[Close]

BLAST of CsGy1G023840 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 89  RRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 146
           ++ LGGPGS PP C  KCGKC PC AVHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 51  QKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CsGy1G023840 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 22/47 (46.81%), Postives = 25/47 (53.19%), Query Frame = 0


Query: 96  GSSPPRCASKCGKCTPCTAVHVP----VPPGTPVTAEYYPEAWRCKC 139
           GS PP C  KC  C PC A+  P    +P  +P  A Y PE WRC C
Sbjct: 58  GSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSPHYANYQPEGWRCHC 104

The following BLAST results are available for this feature:

BLAST of CsGy1G023840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1PEY6	2.4e-24	49.61	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q2V3I3	5.6e-21	69.35	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	4.8e-20	70.18	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
C4B8C4	1.5e-05	46.81	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
P43212	5.6e-05	46.00	Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1	[more]

BLAST of CsGy1G023840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658830.1	3.21e-103	100.00	EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis sativus] >KGN65854.1 hypothe...	[more]
KAA0060006.1	1.26e-67	90.00	EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis melo var. makuwa] >TYJ97264....	[more]
XP_038895367.1	6.11e-58	69.80	EPIDERMAL PATTERNING FACTOR-like protein 6 [Benincasa hispida]	[more]
XP_023525346.1	5.97e-40	51.85	EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X2 [Cucurbita pepo subsp. pep...	[more]
XP_023525345.1	1.81e-39	50.00	EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita pepo subsp. pep...	[more]

BLAST of CsGy1G023840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXR9	1.56e-103	100.00	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G533...	[more]
A0A5D3BE35	6.10e-68	90.00	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1KAS0	1.35e-38	51.23	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1KCE5	2.87e-38	62.96	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1G964	5.78e-38	62.04	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of CsGy1G023840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30370.1	9.2e-27	87.72	allergen-related	[more]
AT2G30370.2	1.7e-25	49.61	allergen-related	[more]
AT4G14723.1	4.0e-22	69.35	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT3G22820.1	3.4e-21	70.18	allergen-related	[more]
AT3G13898.1	1.1e-06	46.81	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 95..145 e-value: 1.2E-20 score: 73.2
None	No IPR available	PANTHER	PTHR33109:SF4	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 6	coord: 29..145
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 29..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G023840.1	CsGy1G023840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane