CsGy1G023820 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G023820
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	transcription initiation factor TFIID subunit 15b-like
Location	Gy14Chr1: 22527290 .. 22537105 (+)
RNA-Seq Expression	CsGy1G023820
Synteny	CsGy1G023820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTATCTTGAAGTCGCGTAGGATGTATACGCCCTCACAAATTATTCAACCCTAATCCATCTTCTTCCCTCTCTCTCTCTCGCTCTGAAGTTAGCCCTAAAAAAAAGCTAATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCGTCTTACGGAGCCCCTGGAGGCGGTGGAGGATACGGTGGCGGAGGTGGAGGCGGTGGATACGGAGGCGGTGGTGGTGCAGGCTATGGAGGGAAGGGCGGTGATGGTGGATATGGAGGCGGAGGCCGTGGAGGCGGCGGCGGCGGCGGCGGTGGTAGAGGATATGGAGGACGAGGTGGCGGCGGAGGCTATGGTGGTCGTGGTATGTACTTCTCTTTTGTCCTTCGATTTGTTATTATCATTGTTTTATCTTAATCTTTTAGTGACAAGAATCTTTGGGGAAAAGGAAGTTTATTGTTTTCAACAAAATTATGATTTTTATCCTTTACTTTTAATTCTTGTTGGGATCACTTTCGTTTTGTTCTGTTCGTTCGATGACGCTATTGCTCTGTATTGCTTCGGAAAGGTTCATTTCTTGCTATTGGTGGGGTGTCTGACTTGTATTTGTTAAGTAAATTTCCTGCGATCGGATCTAACTGTGAAGCTAACATTGGATTTTTTTTTGTTTCTCCCTAAAGACTTACATGTTCTTCCTCGTCTCAGTTTCTTTATTTTCCTTTTTGTTTTGATCTAAATTAGGCGGCGGTGGCGGATATCAAGGAGGAGATCGCGGAGGCGGATATCAAGGAGGAGATCGAGGAGGACGAGGCGCTGGACGTGGTGGCGGGGGTGGTCGTGGCGGAAGCGGCAGAGATGGGGATTGGGTCTGCCCTAATCCTGGGTAGGTTTTTTCCCCTCTTCATCTACTCTGTTTGATTCTTTTGTTTTACTTCATTGTCATGGGTAAACTGAGCGATTCCCCATCCCTAAATACATACATTTTAGACATTTATATGGGCAACTTATCTTATGTTATCTAAGTTCTTAATTGAAACTCTTGTTTTTTTATTTTATTTATGCCATATAGCTGTGGAAATTTGAACTTTGCTAGAAGAGTAGAGTGTAACAAGTGTGGTGCACCCTCACCCGGTGGTGCTAGTGATCGAAGTGGTGGTGGTGGTGGTGGTGGTGGTTATAATAGAGGTGGAGGTGACAGTGGCTATGGTGGCAGTCGTAATGGCAGAGGTGGTAGTTTCCACGGTGGTAGAAGTGGAACTCATGATGGAGGTCGAAATGAAGGAGGGAGCAGAGGTGGTAATTCTTATGGTGGTCACCAGGGAGGAGAAGATAGCGGGTACGGTCAAGTTCCCCCATCCTCAGCACCGTCATCTGGTGGTCTTGCTGGCTCTTATCCACCATCTTACCATGGTGGAAGTTCAGATTACGGGACTGATGCGGTTCCTCCTCCCGCAAGCTATAGTGGAACAACATACCCTCCAACTTATGGTGGTCCCACAGGTGGCTATGGTGGTGACAGTTTAGGTGATGGGCGTGGTGCTGCTGCTCGGGGTGGGCCATCAGCTGGATATGATGGGGGCTACAATGCGGGTGGTAGAGGTGGCTATAATGCTGGTGGTAGAGGAGGAAGCTATAATGCGAGTGGTGGTAGAGCTGGTGGTTATGGAAGTACACCGGCAGCAGAGCCAGCACAGGTTAAACAGTGTGATGATAATTGCGACGATTCATGTGATAACTCTAGAATCTATGTATCCAATTTGCCACCAGATGTGACCACTGATGAATTGAGAGAATTATTTGGTGGAATTGGTCAAGTAAGTAACCTTCCCTTAAGCTATATTCTGCCTCTGGTGTTTCATCCTTGTTGAATGGGAACCATGTGGTCGTCAAGTCTCGTTTAAACAATATATAGAATTTCAAATTATATTTCCATGTTTAGAAACTTGACTTTTGATTATGAGGCAATGGTTTGTGCTATATGAAGCTCTTATAGAGCTAGTTCTATCCTCACTGCCAATGAAGTGTCTGCAATTAATGTTCTGGCTTATCTAAACTGCTTCTGGATAGTGTATTCCTGAATGATAGTCTGTCCTTTTTCAAATAACAAGTATACTTTAATCTATTTTCTAAATGAATGATCATCTCTTGTTCAGAATATGCATGTTTGAGTTCTGTCTGAGAAGTTTGTTAATGATTTAAGAGGTTTTGTAGGTCTAGCTCTATAGTTATTGTAAATGAAGTGGCTTTTGCTTCTCAAGTGCTGCAGAACTTTTTCTCCATTGGGTTTTTCTTATTGAACTGTTTAATTGAAGCCTTTTTTACATTTTCAATTTGAAGATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAATGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAGGACCCCTCAGCAGCGCATTCTGCTGGCGGTTTCTATAACAGTAACTACTGTGCTCCTATAGTATTATAATGACAATATTAGCTACTATGGTTTTAATTTTAGTTTGAGTTTCTACTGTATCATTTTTCAATGATAATATTTTTGTATCCTCAGATTATGATTTGAGAGGTTATAGCATCAATGTTGCAATGGCTGAGAAGTCTGCACCGAGGGCTCCACCTGCATATAACCATGGGTACTTGCTTTTCCATTATTTTTTCAAAACAAATAGAGAAATCTGAGAGAGTTCAGGCCTGCATATATCTAGAACTATGTACTTACTAGTTCTTTCTTGGTGTTTGTTCATAAGGCTGATAAATTGACAAATGTAATTACTAGTGAGAGCTAATAGATTTGGTTCTTGTTTCCATAGCTTTTATTCTCTCTTAGTTTTCTCGTTCTTGTACATATGCATGGGTGGAAAAAGGTTCTTGTTTCCAGAATTAGGAGGGACAAGTTACCGTTTTGTCCAATATTTGATACTGTTCGATATCCCCCGAGTTTATCCTATCTAGGAACTATCAACATTATGCATTGTTTTGATCTTTTGCTCTGAGATCCAAACATTGTTAAGAATAAGGCTTTGAAATAAGTTTTCCTGTCACTCATTTTTGTAGAAATGTTATGTATTACTGTATTGTTCTTCTTATTGCTTAGGATGACTCATTAGTCTTAGTAGGATACCAGTTTCCTTGTTCTTGAGTGTGGAGGGTGGATACTTTTTTGTCTTCTCCTTTTCTGCCAATATTCTTATGTATAGATATTTTAACCAAATCATTTATACTATTATATAATTAGCAATATTTTGGTGTTACTTTGGGCTATACTCATCTTTTTGCAGCTAACTTCTACCACAATGGGAAAAAAACGTTTAAAAAAAGTGGAAAAAAGAGTTTCACATGTGGCAATTTGCGATTGGATAATTGGGTGGGATGGGTGTAGTTCAGGATGCACCCAAGTTTGTTTTTCTTATATGATTATATTGTTTAGAAAACTTGTTGTCTTGCACTCCATAAACTGCCCTTTCATGTTGCAGTGGTGGTGGTAGAGGTGGATATGGAGGTGGTGGAGATAGGCGCAGAGATAGCTACAGGGACGGAGGCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCACGTCCTTACTGAGAGATTCGGCATTGAGCATTTTATGTAATGGGAATTGTGATCTTAAGTGTTTTAGTTTTGTTCCATGGCTGGATTCTTGAATTGGAGACCAAAGAGGTAGGTTGTTCACTTTCTATGGGCAAGAGACCTCTTTGCTCCTTTTTATCTATAGTGGTGCCTGGAGGATTATAATCTTGCTGGGGCTTGAGATTAATCTAGTTGTGTGGATGTTTTTTTTTATAGAGGCAGGCGGATAATCTCCAAACTGCTTGTTGCTAAGGTAGGTGTTGATGTTTTCAGGTGAGTGCTTCTCTTTCCATAACCATTCTTAGAATTATGCACTTGGTGCTCTGATGTATAAAGCTCCACCTGATCTCTCAGCTACATCCTTGTTGGATCTGATGCAAGCATATCTTAGCCTTTGATCATAATTCTGCATTCATAATTTAATTATTAAATATTTACTTGCCATGTTCTTTACTCTTTAACGCCCTTTATTGTTATTTATTATCTATTTGCTAGGGATGGTCTGAATTCTTTTCTTATTCATCTCACATGTGTGTTCAAGGCTGCTTGTGATCATATGATGTTTGATTTAGCTTGTTATTATCATAAAGAAGACCATCATATTAGTAAGTCAACCTAGGTTTTACGTTGTGGTGGTAAGTTACTTCTGTCAAGTACAACTGTCAACTGTCAACTGTCGCCCCCATCGAACTTTGGAATCGTTCCTTTTTTGGATTGGGGTTTTATGTCGGACCTTCAAGTTAGAAGTAGGGACAATTCATATCCAATATAGGAACTTCACCTTTTTACTGTGTTTTTGGGGTGGGGGTAATGGGATGTCAGATTGGGTTTTTGGCAATGTTGCATATTTCTTCTGGGAACGCTGTGGTGCAACAATGTCTTGACACTCCAAATGTTGTAAAGATTTATTTTAGTTGGGTCTTAAGGCAAACACTAAAGTCATGGATTCTGATGCCGTGGTGCTGCCATTTACATTCTGCACATTCGTTTGCTGCGTTAGGCTTCTTTGGAGCTCTGCCGAGGTAATATTCAGCATTAGTTTCGGATTTGTCCTAGGAGTCGATTTTGTTATTGAAAAAAGACTTTATGTACTTGTTTTTCCACCCTCCAAGGGCATGGGGGGGTTGTTTTGTTGCCTGATTTTTGACCTATTGCATAAACTAGTGTGTTTGAGCAATGGATGACAAATTTCTGTATGTTTCATATTTTTCTTCCCAAACCATCAAATAGCATACCTTTGAAGAAGACGCAGTCTCGAATGTAATGTGTTGTGCTGAGTGCTTGTAAGTGACGATATTGTGTGATCATCAAACAAATGGACTTTGTTGTGAAAATACCATCAACTTTTCAAGATATTATCATTAATCCAATTTTTCACAAATTTCTTAGCCTTGAAAATAAAAACTAAAATTTTAAGTTAACGAATAGTTTAAGTTTATATTGATATTAATTTCATGATTGTTAAGAGGTGAATTGAATTGATATTCTAATATTAAAATTCATGAATTACGAAGAAAAAAAAGAGATAAGTATAAATATAATGTAAACAAAAGATAAGTTTATTTATTTGAAAATAACAAAAGATTTATATACTAATTTATTCTTAAAATCTTTTGTTGGTATAATCTTTCCAAAATGTCGACTTTAACACATTTGCTATAAACGTTGGTTAAATTATAAAATTTGACGAAATCTCAAAAAATTTTAAAATAGATTTTTTCTAAACACTAATAGATTTATCCAACTACAAATAGTCAAATATGACTTTTTACTTGATAACTATCTGTATATTAATTACAATAATAACTATTAAAATTGGTTAGGTCGGTGATCATAACTTTGCATTAATAGAAGGGTAAATTTAAATCTATTGTTTTAACTTGAATCTTTTGTTCGTGAAAAATTGCTATAAAATTTGAATGAATGTGAGTATTTTCAACTTTTCTTAAATTCAAAGGTATTGTGAAACAACACTTTAACGATTTCTATAAAAAAACAACTGCAAGAGTATTTTTGAACTATATTTTAAAAAAATTTAAGAAATTTTAAATATATTTTTATTTTTGACACAAAATTGAAAGTTCCATTTTGTATAACTTGTACTTATTATTTTATAACATATGAGAACTGATGAATCAAATATTTATATTAAGATTGATGGTACGCGATTTATTCAAATTGAAATATACTAAGGTTGCTTTTGAGTCTTACAAATCTTTTCAATCCTCAATCTTTGCATCAATAAAACTTTGTTGGAATCATTGAATCATATTTCCTATTTTGTGAAAATTTAGAGAGAATTTATTTCCAACAGTTAGATATGCCACCGTGCATATGACTTATTTTTTCAAAAAGATAAATAGAGTTTTCCATACATTCTCCATAACACTAAAATTCTAAAATGATGTTAAAAAATATGATCACAAATTACTAAAAGAGTTCTGAATAGATGAAAAGAAAGGGAAGAATACAACCTAAGAAATAAACAAAGATAAATATGCTAATCTGTGCTCAAACTTATATCCTCGAGATCAAATATCCAAATTCTTCTATCCTCCTTTCTAAACGAAAAAATGGAGAAAGTAGGATAGAAATGCCATCATGTACTATTACCTTGCTTGTTTCATATTTTACTAAATAAGATTCAAACATTGGGTTCTAATGAGGATAAGATATTTGCAATATCATTTTGTGGGTGAATCAAAAGAGCACGTCAAAACTTAGCCCAACTATGATATTGAACAACTTTCAGAATTGCAATGGGTCACAGCAAGTTAAATGTACATAAAAGTGGCTACCGAACCTCCTCTGCGACCCTGGAGGAAAGGAATTTCCGAGGGAAAAACAGAGCTTCCACGGCAGTATTTACAGTGTCTTTCCACTCATGGACTCTAAGACACAGACCGTCCTCCACATCGAGCACAAAACATGTCCACACATCATTCTGCCCATTCATTGCATATGCTGTGGTGGTGTTGGTTGTATGTTGTAAGGTGGTCCATGTGTCGGTGGTGCACGTGCATATTGCGAAACAATATCGATGCCAGATCCTCCTTGAACCTGAAACAGATCCTCATCCTATAATTATGGAGGTTCAGAGATGATAATTGTTGAGAACACATTGATTTGTCATATCTAATAGATATAAGGGAACACATACTAACATGAGTACAACTTCGTAATTAAGACACCACTCCTTTTCTTTGAGGTTAGAGGTTAAAAACTTAAAACCCCTCTACGTTCATTCAACTCAAGCAAAATAAACCACACAAGAAACTCTCTTAAGCTAAAACCCCATGTTTTTATAGTCGGTTCAAGGGCTGTCATAATAGTTCTAACAAACAATTCCACCCATTTTAAGTTGCAAGCAACCAAGGGCATGTTGCCCTCCTATAAAAACACCTTCACAGTCACCTCTACAGAGTTTTTTTTTTTGCAATTCTAATTTCCATTAAAGGAAGCAATTTTGTTGCTTGGTTTTTGGTTTTGATCGTATAAAGATGTCCGGAAATGCTTTTAGCTTCAGTTACAATCCCTTCATTGTTTGATAAGTTGATAACCAATTCTTTAGATGCTCAATCCTATTCTCTTAAAAGTACATGGCTGAAAGCATTCTGTAGCTACGTCAACGAATATTCCAAGGTGCTTTTGGCCTTTGGCATTAGTACTTTTATATCATTGTCAAACATGATACTTTTGAGTCAGGAGTATCTTTGGCATTCCAAACATAGCCTAAGTTATATTATGGTTGCTTATAGTTGATAGTTCAACTTCAGGTTCCAATGAGATCAAGGAAGTACCAGCGCTGCACTAAATTGTTGGGCCATGGAACTAATACAGTCATAGAGGATATACCTGATGCATGCCATAAGGGTCTGGGGGATATGAGCTTCCACCATATCTTATGTCTGGATGGCCATAAGCTGCAGTATAACCGGAAACTGTATGAAAGTGCAATATAAGAGTCAGTGGAAAAAACAGGATGATGGATAAGTTACCAAGGGCAAAAAGACAGGCTTACAAGGACTCGTTACAGCTGCTGCAGCCCTTGCTCTCTTCTCTGCATTGGCCAGTTCAGCACGCAATTTTTCAACTTCCTGAGACATGGAAACCATACCCTTTTCCATTGCCTCAGCCTGCTCAAGATTACTAGCGTGTGTTCTTTTCTCATATTCGATAGCAGCCCTGTTCAGATCAACAACAAATAGGCAGAGGTAATTTTCAAGCCTCAATTATACTTCTCAAATAAATAGGATACTGCATTGGATTTCTTCTGCATAAAAGGAGTGATCCTACCAATTTTTTTGCCCACTCTGTTATATAATATCAAGTTGTTTTGTTTTGCAATCAACAAACAAGAAGAAACATTGGAGTTAACTATAGAAAATGATGAAACTTCCACATGCCGACCTCAAAACAATCTGCTTACATTTCCTCCTCCTAACTTTTCTGATTCTATTATTCTTTTTATTCCAATGGTTTGAACAACTTCATCATATTGAATATAATATTTTTGCAAAGAGAATTGTGCCAACTCTATGACTAAACAAGCATATTGTTCGTCCAGTAAGATCATATAAGATCTAATATTAAAGATAACATCGTTTTGCACCAAGTGAACTGATACTAGGATTGTTTCCTTGAACAAGCATACTGCTTTTCCTTTTAGGATGAGATAGTTTTGATATACAATGTTTTTAGCTTGACAACCAATTTAATGTCTTTTCTATCCACTGTAATACTTTCTTGGCATGAAGGTATCTCGCTCCACCTCTCAACTTCGCCTAACCCAAACAAAGTATACTCCAAAATGGAATTCTTATCTCGTTGAGACTGACCTACTATGCCTATATCTCCGGGTGTTCAATCACTGAATAAAAGAGACTACTTGTTCTTTAATAAAGGTGGCCGGCGTTTCTTTCCCAGGCTTGTGTCCACATCTCGTTTTCCAATCTTTCCAATTCCATAACTGTTGAACCATGTCTTTCAAAAGTGGCCACTCATGTAAACATAAATTAAGAAAGGGCCTCGAAAGCGACCACTGTGATAGTAATGATATCAATAACAAGAACAGCTAGACCAAAAGAACAAACTTTAGAGTCTTTTAATGGTCAAACTTTCAAGTAGGTACTAATGTTCAAAAAATTGAAAGAAAAGGCTTAGCATTTGAACTGATAATTTGATATCCTCTTTGCAGCAAAAACATAAAGCTATAAAAGAATTAAGCTAACTCAGGAACAATAGATGGGAGAAACCTTCCCAGCCAGAGAAACTCAACATAAAACTTGAAAAGGCTATTTCGAACTATAGGGAAGAAAAAGATATTGAAAAACTAAAGAAAAACGTCCAAAGGAGCAATAAAAATTTACCTTCCTCTTTGAATTTCATGGTGCATTCTATCAATTTCAGCTTTAATAGACGGCAATGGCTGTGACTCCGAAGAGGCTTTAGTAAGGTCGTCGCGAATAGCTTGCAACTCGGAATTTAACTCTTTCTTGACGGCACTCAGCCTCTGTATATCCGCCCGTATTTGAACGAGCTCCGCCATCATAGCGTCCATCGCACGAACCTCGGCGTCCATCTTCAGCGATTTCTCATAAACCTCCCTGACCTCAGCGTCTCTCTCGGCCTTGACTTTAGCCGCAGTGGCCGATAAGTGCCGGAGCTCTTGCTCAGCCGAGGCCAGCTCTTGCTTGAGCGCCACGTGAGTGGCAGCAAGGTGTTGGTTATCAGAGAGGAGAGTTTGAATCTCTCGGCGCTGGGCAGATATCCGATCTTCGAGAAGGATTGCCTGGTGAGCCCTGGAAGAAGCGCCGACGGAAGATGAGTGAGAAAGACGATGATGGGATCGACGATCATCAGGCGGGCTTCGGCTCAACGGAACTTCGCGCCGTTTCAAGGCATTCGGCTGATGACTTCGTCCGGCCATGCCTGTGGATAGAGCGTTCTTCCACCTTCGATTGGAGGTCAAAACGATTTGAGAAATCGAATTTTCTCGACAGCAGTTTTCGTTTCGGTTCCTTATTTGGAAGGGTTCCGTCCGCTCGTCGTTTCGTTGGCCGGCTACCGGATTTCTAACGGCGGCGAGATTGTTTACTAATGGGCTTTAATTTTAGGCCCATTTTGATTATACAGTTATTAGCCCAACTTAAATATGAAGCCTTTATTAAGTAAATAGACTGAAT

mRNA sequence

CTTTATCTTGAAGTCGCGTAGGATGTATACGCCCTCACAAATTATTCAACCCTAATCCATCTTCTTCCCTCTCTCTCTCTCGCTCTGAAGTTAGCCCTAAAAAAAAGCTAATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCGTCTTACGGAGCCCCTGGAGGCGGTGGAGGATACGGTGGCGGAGGTGGAGGCGGTGGATACGGAGGCGGTGGTGGTGCAGGCTATGGAGGGAAGGGCGGTGATGGTGGATATGGAGGCGGAGGCCGTGGAGGCGGCGGCGGCGGCGGCGGTGGTAGAGGATATGGAGGACGAGGTGGCGGCGGAGGCTATGGTGGTCGTGGCGGCGGTGGCGGATATCAAGGAGGAGATCGCGGAGGCGGATATCAAGGAGGAGATCGAGGAGGACGAGGCGCTGGACGTGGTGGCGGGGGTGGTCGTGGCGGAAGCGGCAGAGATGGGGATTGGGTCTGCCCTAATCCTGGCTGTGGAAATTTGAACTTTGCTAGAAGAGTAGAGTGTAACAAGTGTGGTGCACCCTCACCCGGTGGTGCTAGTGATCGAAGTGGTGGTGGTGGTGGTGGTGGTGGTTATAATAGAGGTGGAGGTGACAGTGGCTATGGTGGCAGTCGTAATGGCAGAGGTGGTAGTTTCCACGGTGGTAGAAGTGGAACTCATGATGGAGGTCGAAATGAAGGAGGGAGCAGAGGTGGTAATTCTTATGGTGGTCACCAGGGAGGAGAAGATAGCGGGTACGGTCAAGTTCCCCCATCCTCAGCACCGTCATCTGGTGGTCTTGCTGGCTCTTATCCACCATCTTACCATGGTGGAAGTTCAGATTACGGGACTGATGCGGTTCCTCCTCCCGCAAGCTATAGTGGAACAACATACCCTCCAACTTATGGTGGTCCCACAGGTGGCTATGGTGGTGACAGTTTAGGTGATGGGCGTGGTGCTGCTGCTCGGGGTGGGCCATCAGCTGGATATGATGGGGGCTACAATGCGGGTGGTAGAGGTGGCTATAATGCTGGTGGTAGAGGAGGAAGCTATAATGCGAGTGGTGGTAGAGCTGGTGGTTATGGAAGTACACCGGCAGCAGAGCCAGCACAGGTTAAACAGTGTGATGATAATTGCGACGATTCATGTGATAACTCTAGAATCTATGTATCCAATTTGCCACCAGATGTGACCACTGATGAATTGAGAGAATTATTTGGTGGAATTGGTCAAATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAATGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAGGACCCCTCAGCAGCGCATTCTGCTGGCGGTTTCTATAACAATTATGATTTGAGAGGTTATAGCATCAATGTTGCAATGGCTGAGAAGTCTGCACCGAGGGCTCCACCTGCATATAACCATGGTGGTGGTGGTAGAGGTGGATATGGAGGTGGTGGAGATAGGCGCAGAGATAGCTACAGGGACGGAGGCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCACGTCCTTACTGAGAGATTCGGCATTGAGCATTTTATGTAATGGGAATTGTGATCTTAAGTGTTTTAGTTTTGTTCCATGGCTGGATTCTTGAATTGGAGACCAAAGAGAGGCAGGCGGATAATCTCCAAACTGCTTGTTGCTAAGGTAGGTGTTGATGTTTTCAGGTGAGTGCTTCTCTTTCCATAACCATTCTTAGAATTATGCACTTGGTGCTCTGATGTATAAAGCTCCACCTGATCTCTCAGCTACATCCTTGTTGGATCTGATGCAAGCATATCTTAGCCTTTGATCATAATTCTGCATTCATAATTTAATTATTAAATATTTACTTGCCATGTTCTTTACTCTTTAACGCCCTTTATTGTTATTTATTATCTATTTGCTAGGGATGGTCTGAATTCTTTTCTTATTCATCTCACATGTGTGTTCAAGGCTGCTTGTGATCATATGATGTTTGATTTAGCTTGTTATTATCATAAAGAAGACCATCATATTAGTAAGTCAACCTAGGTTTTACGTTGTGGTGGTAAGTTACTTCTGTCAAGTACAACTGTCAACTGTCAACTGTCGCCCCCATCGAACTTTGGAATCGTTCCTTTTTTGGATTGGGGTTTTATGTCGGACCTTCAAGTTAGAAGTAGGGACAATTCATATCCAATATAGGAACTTCACCTTTTTACTGTGTTTTTGGGGTGGGGGTAATGGGATGTCAGATTGGGTTTTTGGCAATGTTGCATATTTCTTCTGGGAACGCTGTGGTGCAACAATGTCTTGACACTCCAAATGTTGTAAAGATTTATTTTAGTTGGGTCTTAAGGCAAACACTAAAGTCATGGATTCTGATGCCGTGGTGCTGCCATTTACATTCTGCACATTCGTTTGCTGCGTTAGGCTTCTTTGGAGCTCTGCCGAGGTTCCAATGAGATCAAGGAAGTACCAGCGCTGCACTAAATTGTTGGGCCATGGAACTAATACAGTCATAGAGGATATACCTGATGCATGCCATAAGGGTCTGGGGGATATGAGCTTCCACCATATCTTATGTCTGGATGGCCATAAGCTGCAGTATAACCGGAAACTGTATGAAAGTGCAATATAAGAGTCAGTGGAAAAAACAGGATGATGGATAAGTTACCAAGGGCAAAAAGACAGGCTTACAAGGACTCGTTACAGCTGCTGCAGCCCTTGCTCTCTTCTCTGCATTGGCCAGTTCAGCACGCAATTTTTCAACTTCCTGAGACATGGAAACCATACCCTTTTCCATTGCCTCAGCCTGCTCAAGATTACTAGCGTGTGTTCTTTTCTCATATTCGATAGCAGCCCTGTTCAGATCAACAACAAATAGGCAGAGCTTTAATAGACGGCAATGGCTGTGACTCCGAAGAGGCTTTAGTAAGGTCGTCGCGAATAGCTTGCAACTCGGAATTTAACTCTTTCTTGACGGCACTCAGCCTCTGTATATCCGCCCGTATTTGAACGAGCTCCGCCATCATAGCGTCCATCGCACGAACCTCGGCGTCCATCTTCAGCGATTTCTCATAAACCTCCCTGACCTCAGCGTCTCTCTCGGCCTTGACTTTAGCCGCAGTGGCCGATAAGTGCCGGAGCTCTTGCTCAGCCGAGGCCAGCTCTTGCTTGAGCGCCACGTGAGTGGCAGCAAGGTGTTGGTTATCAGAGAGGAGAGTTTGAATCTCTCGGCGCTGGGCAGATATCCGATCTTCGAGAAGGATTGCCTGGTGAGCCCTGGAAGAAGCGCCGACGGAAGATGAGTGAGAAAGACGATGATGGGATCGACGATCATCAGGCGGGCTTCGGCTCAACGGAACTTCGCGCCGTTTCAAGGCATTCGGCTGATGACTTCGTCCGGCCATGCCTGTGGATAGAGCGTTCTTCCACCTTCGATTGGAGGTCAAAACGATTTGAGAAATCGAATTTTCTCGACAGCAGTTTTCGTTTCGGTTCCTTATTTGGAAGGGTTCCGTCCGCTCGTCGTTTCGTTGGCCGGCTACCGGATTTCTAACGGCGGCGAGATTGTTTACTAATGGGCTTTAATTTTAGGCCCATTTTGATTATACAGTTATTAGCCCAACTTAAATATGAAGCCTTTATTAAGTAAATAGACTGAAT

Coding sequence (CDS)

ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCGTCTTACGGAGCCCCTGGAGGCGGTGGAGGATACGGTGGCGGAGGTGGAGGCGGTGGATACGGAGGCGGTGGTGGTGCAGGCTATGGAGGGAAGGGCGGTGATGGTGGATATGGAGGCGGAGGCCGTGGAGGCGGCGGCGGCGGCGGCGGTGGTAGAGGATATGGAGGACGAGGTGGCGGCGGAGGCTATGGTGGTCGTGGCGGCGGTGGCGGATATCAAGGAGGAGATCGCGGAGGCGGATATCAAGGAGGAGATCGAGGAGGACGAGGCGCTGGACGTGGTGGCGGGGGTGGTCGTGGCGGAAGCGGCAGAGATGGGGATTGGGTCTGCCCTAATCCTGGCTGTGGAAATTTGAACTTTGCTAGAAGAGTAGAGTGTAACAAGTGTGGTGCACCCTCACCCGGTGGTGCTAGTGATCGAAGTGGTGGTGGTGGTGGTGGTGGTGGTTATAATAGAGGTGGAGGTGACAGTGGCTATGGTGGCAGTCGTAATGGCAGAGGTGGTAGTTTCCACGGTGGTAGAAGTGGAACTCATGATGGAGGTCGAAATGAAGGAGGGAGCAGAGGTGGTAATTCTTATGGTGGTCACCAGGGAGGAGAAGATAGCGGGTACGGTCAAGTTCCCCCATCCTCAGCACCGTCATCTGGTGGTCTTGCTGGCTCTTATCCACCATCTTACCATGGTGGAAGTTCAGATTACGGGACTGATGCGGTTCCTCCTCCCGCAAGCTATAGTGGAACAACATACCCTCCAACTTATGGTGGTCCCACAGGTGGCTATGGTGGTGACAGTTTAGGTGATGGGCGTGGTGCTGCTGCTCGGGGTGGGCCATCAGCTGGATATGATGGGGGCTACAATGCGGGTGGTAGAGGTGGCTATAATGCTGGTGGTAGAGGAGGAAGCTATAATGCGAGTGGTGGTAGAGCTGGTGGTTATGGAAGTACACCGGCAGCAGAGCCAGCACAGGTTAAACAGTGTGATGATAATTGCGACGATTCATGTGATAACTCTAGAATCTATGTATCCAATTTGCCACCAGATGTGACCACTGATGAATTGAGAGAATTATTTGGTGGAATTGGTCAAATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAATGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAGGACCCCTCAGCAGCGCATTCTGCTGGCGGTTTCTATAACAATTATGATTTGAGAGGTTATAGCATCAATGTTGCAATGGCTGAGAAGTCTGCACCGAGGGCTCCACCTGCATATAACCATGGTGGTGGTGGTAGAGGTGGATATGGAGGTGGTGGAGATAGGCGCAGAGATAGCTACAGGGACGGAGGCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCACGTCCTTACTGA

Protein sequence

MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGGGGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNAGGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY*

Homology

[Close]

BLAST of CsGy1G023820 vs. ExPASy Swiss-Prot
Match: Q94KD0 (Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=3702 GN=TAF15B PE=1 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 8.3e-93
Identity = 290/497 (58.35%), Postives = 325/497 (65.39%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60
           M+GMY+Q           GGGG      GG GYGGGGG G    GGD GYGG G  GGG 
Sbjct: 1   MAGMYNQ----------DGGGGAPIPSYGGDGYGGGGGYG----GGDAGYGGRGASGGGS 60

Query: 61  GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120
            GG  GY   GGGGG G RGGG        GGGYQGGDRGGRG+        GG GRDGD
Sbjct: 61  YGGRGGY---GGGGGRGNRGGG--------GGGYQGGDRGGRGS--------GGGGRDGD 120

Query: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRG 180
           W CPNP CGN+NFARRVECNKCGA +P G S       GGGGY+RGGGDS  GG R GR 
Sbjct: 121 WRCPNPSCGNVNFARRVECNKCGALAPSGTSS-GANDRGGGGYSRGGGDSDRGGGRGGRN 180

Query: 181 GSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSA--PSSGGLAGSYPPS 240
            S   GRS  ++  R +GGSR G SYG     E+  YGQ PP +A  PS  G +GSYPP 
Sbjct: 181 DS---GRS--YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDG-SGSYPP- 240

Query: 241 YHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGY 300
                + YG +AVPPP SYSG   PP+YGGP GGYG D+   G     RGG S GYDGG 
Sbjct: 241 ----PTGYGMEAVPPPTSYSGG--PPSYGGPRGGYGSDAPSTG----GRGGRSGGYDGG- 300

Query: 301 NAGGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLP 360
                            +A   +   Y     A   +VKQCD +CDD+CDN+RIY+SNLP
Sbjct: 301 -----------------SAPRRQEASYED---AATEKVKQCDADCDDNCDNARIYISNLP 360

Query: 361 PDVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAH 420
           PDVTTDEL++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN KGDAC++YEDPSAAH
Sbjct: 361 PDVTTDELKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAH 420

Query: 421 SAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHG---GGGRGGY-GGGGDRRRDSYRDG 480
           SAGGF+NNY++RG  I+V MAEKSAPRAP     G   GGG GGY GGGGDRRRD+Y   
Sbjct: 421 SAGGFFNNYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYGGGGGDRRRDNY--- 422

Query: 481 GSGPDRHQHGGNRSRPY 492
            SGPDR+ HGGNRSRPY
Sbjct: 481 SSGPDRNHHGGNRSRPY 422

[Close]

BLAST of CsGy1G023820 vs. NCBI nr
Match: XP_011658817.1 (transcription initiation factor TFIID subunit 15b [Cucumis sativus])

HSP 1 Score: 860 bits (2223), Expect = 6.07e-313
Identity = 491/491 (100.00%), Postives = 491/491 (100.00%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60

Query: 61  GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120
           GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD
Sbjct: 61  GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120

Query: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRG 180
           WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRG
Sbjct: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRG 180

Query: 181 GSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYH 240
           GSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYH
Sbjct: 181 GSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYH 240

Query: 241 GGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNA 300
           GGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNA
Sbjct: 241 GGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNA 300

Query: 301 GGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD 360
           GGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD
Sbjct: 301 GGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD 360

Query: 361 VTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA 420
           VTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA
Sbjct: 361 VTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA 420

Query: 421 GGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR 480
           GGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR
Sbjct: 421 GGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR 480

Query: 481 HQHGGNRSRPY 491
           HQHGGNRSRPY
Sbjct: 481 HQHGGNRSRPY 491

[Close]

BLAST of CsGy1G023820 vs. NCBI nr
Match: XP_008457317.1 (PREDICTED: transcription initiation factor TFIID subunit 15b isoform X1 [Cucumis melo])

HSP 1 Score: 825 bits (2132), Expect = 4.23e-299
Identity = 480/494 (97.17%), Postives = 481/494 (97.37%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGG-AGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGG AGYGGKGGDGGYGGGGRGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGGGRGYGGRGGGGG--YGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGR 120
           GGG  RGYGGRGGGGG  YGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGR
Sbjct: 61  GGG--RGYGGRGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGR 120

Query: 121 DGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRN 180
           DGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR  GGGGGGGYNRGGGDSGYGGSRN
Sbjct: 121 DGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR--GGGGGGGYNRGGGDSGYGGSRN 180

Query: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240
           GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP
Sbjct: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240

Query: 241 SYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGG 300
           SYHGGS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGG
Sbjct: 241 SYHGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGG 300

Query: 301 YNAGGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360
           YNAGGRGGYNAGGRGGSYNASGGR GGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNL
Sbjct: 301 YNAGGRGGYNAGGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360

Query: 361 PPDVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420
           PPDVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA
Sbjct: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420

Query: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSG 480
           HSAGGFYNNYDLRGYSINVAMAEKSAPRAPP YNHGGGGRGGYGGGGDRRRDSYRDGGSG
Sbjct: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSG 480

Query: 481 PDRHQHGGNRSRPY 491
           PDRHQHGGNRSRPY
Sbjct: 481 PDRHQHGGNRSRPY 490

[Close]

BLAST of CsGy1G023820 vs. NCBI nr
Match: KGN66282.2 (hypothetical protein Csa_023345 [Cucumis sativus])

HSP 1 Score: 791 bits (2043), Expect = 1.59e-286
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0


Query: 66  GYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPN 125
           GYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPN
Sbjct: 5   GYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPN 64

Query: 126 PGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRGGSFHG 185
           PGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRGGSFHG
Sbjct: 65  PGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRGGSFHG 124

Query: 186 GRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSSD 245
           GRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSSD
Sbjct: 125 GRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSSD 184

Query: 246 YGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNAGGRGG 305
           YGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNAGGRGG
Sbjct: 185 YGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNAGGRGG 244

Query: 306 YNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTTDE 365
           YNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTTDE
Sbjct: 245 YNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTTDE 304

Query: 366 LRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYN 425
           LRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYN
Sbjct: 305 LRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYN 364

Query: 426 NYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGG 485
           NYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGG
Sbjct: 365 NYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGG 424

Query: 486 NRSRPY 491
           NRSRPY
Sbjct: 425 NRSRPY 430

[Close]

BLAST of CsGy1G023820 vs. NCBI nr
Match: XP_016902120.1 (PREDICTED: transcription initiation factor TFIID subunit 15b isoform X2 [Cucumis melo])

HSP 1 Score: 790 bits (2041), Expect = 9.89e-286
Identity = 452/492 (91.87%), Postives = 453/492 (92.07%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGG-AGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGG AGYGGKGGDGGYGGGGRGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120
           GG                              GGYQGGDRGGRGAGRGGGGGRGGSGRDG
Sbjct: 61  GG------------------------------GGYQGGDRGGRGAGRGGGGGRGGSGRDG 120

Query: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGR 180
           DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR  GGGGGGGYNRGGGDSGYGGSRNGR
Sbjct: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR--GGGGGGGYNRGGGDSGYGGSRNGR 180

Query: 181 GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY 240
           GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY
Sbjct: 181 GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY 240

Query: 241 HGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYN 300
           HGGS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGGYN
Sbjct: 241 HGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYN 300

Query: 301 AGGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP 360
           AGGRGGYNAGGRGGSYNASGGR GGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPP
Sbjct: 301 AGGRGGYNAGGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP 360

Query: 361 DVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS 420
           DVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS
Sbjct: 361 DVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS 420

Query: 421 AGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPD 480
           AGGFYNNYDLRGYSINVAMAEKSAPRAPP YNHGGGGRGGYGGGGDRRRDSYRDGGSGPD
Sbjct: 421 AGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPD 460

Query: 481 RHQHGGNRSRPY 491
           RHQHGGNRSRPY
Sbjct: 481 RHQHGGNRSRPY 460

[Close]

BLAST of CsGy1G023820 vs. NCBI nr
Match: XP_016902121.1 (PREDICTED: transcription initiation factor TFIID subunit 15b isoform X3 [Cucumis melo])

HSP 1 Score: 788 bits (2035), Expect = 7.25e-285
Identity = 449/492 (91.26%), Postives = 450/492 (91.46%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGG-AGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGG AGYGGKGGDGGYGGGGRGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120
           G                                 YQGGDRGGRGAGRGGGGGRGGSGRDG
Sbjct: 61  G---------------------------------YQGGDRGGRGAGRGGGGGRGGSGRDG 120

Query: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGR 180
           DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR  GGGGGGGYNRGGGDSGYGGSRNGR
Sbjct: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR--GGGGGGGYNRGGGDSGYGGSRNGR 180

Query: 181 GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY 240
           GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY
Sbjct: 181 GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY 240

Query: 241 HGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYN 300
           HGGS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGGYN
Sbjct: 241 HGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYN 300

Query: 301 AGGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP 360
           AGGRGGYNAGGRGGSYNASGGR GGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPP
Sbjct: 301 AGGRGGYNAGGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP 360

Query: 361 DVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS 420
           DVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS
Sbjct: 361 DVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS 420

Query: 421 AGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPD 480
           AGGFYNNYDLRGYSINVAMAEKSAPRAPP YNHGGGGRGGYGGGGDRRRDSYRDGGSGPD
Sbjct: 421 AGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPD 457

Query: 481 RHQHGGNRSRPY 491
           RHQHGGNRSRPY
Sbjct: 481 RHQHGGNRSRPY 457

[Close]

BLAST of CsGy1G023820 vs. ExPASy TrEMBL
Match: A0A0A0LYC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533590 PE=4 SV=1)

HSP 1 Score: 860 bits (2223), Expect = 2.94e-313
Identity = 491/491 (100.00%), Postives = 491/491 (100.00%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60

Query: 61  GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120
           GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD
Sbjct: 61  GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120

Query: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRG 180
           WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRG
Sbjct: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRG 180

Query: 181 GSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYH 240
           GSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYH
Sbjct: 181 GSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYH 240

Query: 241 GGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNA 300
           GGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNA
Sbjct: 241 GGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNA 300

Query: 301 GGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD 360
           GGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD
Sbjct: 301 GGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD 360

Query: 361 VTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA 420
           VTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA
Sbjct: 361 VTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA 420

Query: 421 GGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR 480
           GGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR
Sbjct: 421 GGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR 480

Query: 481 HQHGGNRSRPY 491
           HQHGGNRSRPY
Sbjct: 481 HQHGGNRSRPY 491

[Close]

BLAST of CsGy1G023820 vs. ExPASy TrEMBL
Match: A0A1S3C4S9 (transcription initiation factor TFIID subunit 15b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 825 bits (2132), Expect = 2.05e-299
Identity = 480/494 (97.17%), Postives = 481/494 (97.37%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGG-AGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGG AGYGGKGGDGGYGGGGRGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGGGRGYGGRGGGGG--YGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGR 120
           GGG  RGYGGRGGGGG  YGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGR
Sbjct: 61  GGG--RGYGGRGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGR 120

Query: 121 DGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRN 180
           DGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR  GGGGGGGYNRGGGDSGYGGSRN
Sbjct: 121 DGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR--GGGGGGGYNRGGGDSGYGGSRN 180

Query: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240
           GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP
Sbjct: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240

Query: 241 SYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGG 300
           SYHGGS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGG
Sbjct: 241 SYHGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGG 300

Query: 301 YNAGGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360
           YNAGGRGGYNAGGRGGSYNASGGR GGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNL
Sbjct: 301 YNAGGRGGYNAGGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360

Query: 361 PPDVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420
           PPDVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA
Sbjct: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420

Query: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSG 480
           HSAGGFYNNYDLRGYSINVAMAEKSAPRAPP YNHGGGGRGGYGGGGDRRRDSYRDGGSG
Sbjct: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSG 480

Query: 481 PDRHQHGGNRSRPY 491
           PDRHQHGGNRSRPY
Sbjct: 481 PDRHQHGGNRSRPY 490

[Close]

BLAST of CsGy1G023820 vs. ExPASy TrEMBL
Match: A0A1S4E2C0 (transcription initiation factor TFIID subunit 15b isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 790 bits (2041), Expect = 4.79e-286
Identity = 452/492 (91.87%), Postives = 453/492 (92.07%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGG-AGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGG AGYGGKGGDGGYGGGGRGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120
           GG                              GGYQGGDRGGRGAGRGGGGGRGGSGRDG
Sbjct: 61  GG------------------------------GGYQGGDRGGRGAGRGGGGGRGGSGRDG 120

Query: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGR 180
           DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR  GGGGGGGYNRGGGDSGYGGSRNGR
Sbjct: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR--GGGGGGGYNRGGGDSGYGGSRNGR 180

Query: 181 GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY 240
           GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY
Sbjct: 181 GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY 240

Query: 241 HGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYN 300
           HGGS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGGYN
Sbjct: 241 HGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYN 300

Query: 301 AGGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP 360
           AGGRGGYNAGGRGGSYNASGGR GGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPP
Sbjct: 301 AGGRGGYNAGGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP 360

Query: 361 DVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS 420
           DVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS
Sbjct: 361 DVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS 420

Query: 421 AGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPD 480
           AGGFYNNYDLRGYSINVAMAEKSAPRAPP YNHGGGGRGGYGGGGDRRRDSYRDGGSGPD
Sbjct: 421 AGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPD 460

Query: 481 RHQHGGNRSRPY 491
           RHQHGGNRSRPY
Sbjct: 481 RHQHGGNRSRPY 460

[Close]

BLAST of CsGy1G023820 vs. ExPASy TrEMBL
Match: A0A1S4E1L8 (transcription initiation factor TFIID subunit 15b isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 788 bits (2035), Expect = 3.51e-285
Identity = 449/492 (91.26%), Postives = 450/492 (91.46%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGG-AGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGG AGYGGKGGDGGYGGGGRGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120
           G                                 YQGGDRGGRGAGRGGGGGRGGSGRDG
Sbjct: 61  G---------------------------------YQGGDRGGRGAGRGGGGGRGGSGRDG 120

Query: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGR 180
           DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR  GGGGGGGYNRGGGDSGYGGSRNGR
Sbjct: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR--GGGGGGGYNRGGGDSGYGGSRNGR 180

Query: 181 GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY 240
           GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY
Sbjct: 181 GGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSY 240

Query: 241 HGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYN 300
           HGGS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGGYN
Sbjct: 241 HGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYN 300

Query: 301 AGGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP 360
           AGGRGGYNAGGRGGSYNASGGR GGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPP
Sbjct: 301 AGGRGGYNAGGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP 360

Query: 361 DVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS 420
           DVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS
Sbjct: 361 DVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS 420

Query: 421 AGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPD 480
           AGGFYNNYDLRGYSINVAMAEKSAPRAPP YNHGGGGRGGYGGGGDRRRDSYRDGGSGPD
Sbjct: 421 AGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPD 457

Query: 481 RHQHGGNRSRPY 491
           RHQHGGNRSRPY
Sbjct: 481 RHQHGGNRSRPY 457

[Close]

BLAST of CsGy1G023820 vs. ExPASy TrEMBL
Match: A0A6J1HM15 (transcription initiation factor TFIID subunit 15b-like OS=Cucurbita moschata OX=3662 GN=LOC111464812 PE=4 SV=1)

HSP 1 Score: 749 bits (1933), Expect = 4.05e-269
Identity = 441/513 (85.96%), Postives = 450/513 (87.72%), Query Frame = 0


Query: 1   MSGMYDQGGDAAP-SYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAP SYGAPGGGGGYGGGG            YGGKGGDGGYGGGGRGGGG
Sbjct: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGG------------YGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGGGRGYGGRGGGGG--YGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGR 120
           G    RGYGGRGGGGG  YGGR       GG  GGGYQGGDRGGRG+GRGGGGGRGGSGR
Sbjct: 61  G----RGYGGRGGGGGGGYGGR-------GGSGGGGYQGGDRGGRGSGRGGGGGRGGSGR 120

Query: 121 DGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGG--------------- 180
           DGDWVCPNPGCGNLNFARRVECNKCGAPSPGGAS   GGGGGGGG               
Sbjct: 121 DGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASGGGGGGGGGGGFNRGGADGGYNRGGG 180

Query: 181 ---YNRGGGDSGYGGSRNGRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQ 240
              YNRGGGD GYGG+RNGRGGSFHGGRSGTHDGGRNEGG+RGGNSYGGHQGGEDSGY Q
Sbjct: 181 DGGYNRGGGDGGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQ 240

Query: 241 VPPSSAPSSGGLAGSYPPSYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLG 300
           VPPSSAPSSGGLAGSYPPSYHGGS+DYGTDAVPPPASYSGTTYPPTYGGP+GGY GDSLG
Sbjct: 241 VPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYSGDSLG 300

Query: 301 DGRGAAARGGPSAGYDGGYNAGGRGGYNAGGRGG-SYNASGGRAGGYGSTPAAEPAQVKQ 360
           DGR +A RGGPSAGYDGGYNAGGRGGYN+GGRGG SYN  GGR GGYGSTPAAEPAQVKQ
Sbjct: 301 DGRSSAGRGGPSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQ 360

Query: 361 CDDNCDDSCDNSRIYVSNLPPDVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTD 420
           CDDNCDDSCDNSRIYVSNLP DVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTD
Sbjct: 361 CDDNCDDSCDNSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTD 420

Query: 421 EMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRG 480
           EMGNNKGDACVSYEDP AAHSAGGFYNNYDLRGY+I+VAMAEKSAPRAPP YNHGGGGRG
Sbjct: 421 EMGNNKGDACVSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPTYNHGGGGRG 480

Query: 481 GYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 491
           GYGGGGDRRRDSYRDG SGPDRHQHGGNRSRPY
Sbjct: 481 GYGGGGDRRRDSYRDGASGPDRHQHGGNRSRPY 490

[Close]

BLAST of CsGy1G023820 vs. TAIR 10
Match: AT5G58470.1 (TBP-associated factor 15B )

HSP 1 Score: 342.4 bits (877), Expect = 5.9e-94
Identity = 290/497 (58.35%), Postives = 325/497 (65.39%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60
           M+GMY+Q           GGGG      GG GYGGGGG G    GGD GYGG G  GGG 
Sbjct: 1   MAGMYNQ----------DGGGGAPIPSYGGDGYGGGGGYG----GGDAGYGGRGASGGGS 60

Query: 61  GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120
            GG  GY   GGGGG G RGGG        GGGYQGGDRGGRG+        GG GRDGD
Sbjct: 61  YGGRGGY---GGGGGRGNRGGG--------GGGYQGGDRGGRGS--------GGGGRDGD 120

Query: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRG 180
           W CPNP CGN+NFARRVECNKCGA +P G S       GGGGY+RGGGDS  GG R GR 
Sbjct: 121 WRCPNPSCGNVNFARRVECNKCGALAPSGTSS-GANDRGGGGYSRGGGDSDRGGGRGGRN 180

Query: 181 GSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSA--PSSGGLAGSYPPS 240
            S   GRS  ++  R +GGSR G SYG     E+  YGQ PP +A  PS  G +GSYPP 
Sbjct: 181 DS---GRS--YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDG-SGSYPP- 240

Query: 241 YHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGY 300
                + YG +AVPPP SYSG   PP+YGGP GGYG D+   G     RGG S GYDGG 
Sbjct: 241 ----PTGYGMEAVPPPTSYSGG--PPSYGGPRGGYGSDAPSTG----GRGGRSGGYDGG- 300

Query: 301 NAGGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLP 360
                            +A   +   Y     A   +VKQCD +CDD+CDN+RIY+SNLP
Sbjct: 301 -----------------SAPRRQEASYED---AATEKVKQCDADCDDNCDNARIYISNLP 360

Query: 361 PDVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAH 420
           PDVTTDEL++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN KGDAC++YEDPSAAH
Sbjct: 361 PDVTTDELKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAH 420

Query: 421 SAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHG---GGGRGGY-GGGGDRRRDSYRDG 480
           SAGGF+NNY++RG  I+V MAEKSAPRAP     G   GGG GGY GGGGDRRRD+Y   
Sbjct: 421 SAGGFFNNYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYGGGGGDRRRDNY--- 422

Query: 481 GSGPDRHQHGGNRSRPY 492
            SGPDR+ HGGNRSRPY
Sbjct: 481 SSGPDRNHHGGNRSRPY 422

[Close]

BLAST of CsGy1G023820 vs. TAIR 10
Match: AT5G58470.2 (TBP-associated factor 15B )

HSP 1 Score: 342.4 bits (877), Expect = 5.9e-94
Identity = 290/497 (58.35%), Postives = 325/497 (65.39%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60
           M+GMY+Q           GGGG      GG GYGGGGG G    GGD GYGG G  GGG 
Sbjct: 1   MAGMYNQ----------DGGGGAPIPSYGGDGYGGGGGYG----GGDAGYGGRGASGGGS 60

Query: 61  GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120
            GG  GY   GGGGG G RGGG        GGGYQGGDRGGRG+        GG GRDGD
Sbjct: 61  YGGRGGY---GGGGGRGNRGGG--------GGGYQGGDRGGRGS--------GGGGRDGD 120

Query: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRG 180
           W CPNP CGN+NFARRVECNKCGA +P G S       GGGGY+RGGGDS  GG R GR 
Sbjct: 121 WRCPNPSCGNVNFARRVECNKCGALAPSGTSS-GANDRGGGGYSRGGGDSDRGGGRGGRN 180

Query: 181 GSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSA--PSSGGLAGSYPPS 240
            S   GRS  ++  R +GGSR G SYG     E+  YGQ PP +A  PS  G +GSYPP 
Sbjct: 181 DS---GRS--YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDG-SGSYPP- 240

Query: 241 YHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGY 300
                + YG +AVPPP SYSG   PP+YGGP GGYG D+   G     RGG S GYDGG 
Sbjct: 241 ----PTGYGMEAVPPPTSYSGG--PPSYGGPRGGYGSDAPSTG----GRGGRSGGYDGG- 300

Query: 301 NAGGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLP 360
                            +A   +   Y     A   +VKQCD +CDD+CDN+RIY+SNLP
Sbjct: 301 -----------------SAPRRQEASYED---AATEKVKQCDADCDDNCDNARIYISNLP 360

Query: 361 PDVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAH 420
           PDVTTDEL++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN KGDAC++YEDPSAAH
Sbjct: 361 PDVTTDELKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAH 420

Query: 421 SAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHG---GGGRGGY-GGGGDRRRDSYRDG 480
           SAGGF+NNY++RG  I+V MAEKSAPRAP     G   GGG GGY GGGGDRRRD+Y   
Sbjct: 421 SAGGFFNNYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYGGGGGDRRRDNY--- 422

Query: 481 GSGPDRHQHGGNRSRPY 492
            SGPDR+ HGGNRSRPY
Sbjct: 481 SSGPDRNHHGGNRSRPY 422

The following BLAST results are available for this feature:

BLAST of CsGy1G023820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94KD0	8.3e-93	58.35	Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CsGy1G023820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658817.1	6.07e-313	100.00	transcription initiation factor TFIID subunit 15b [Cucumis sativus]	[more]
XP_008457317.1	4.23e-299	97.17	PREDICTED: transcription initiation factor TFIID subunit 15b isoform X1 [Cucumis...	[more]
KGN66282.2	1.59e-286	100.00	hypothetical protein Csa_023345 [Cucumis sativus]	[more]
XP_016902120.1	9.89e-286	91.87	PREDICTED: transcription initiation factor TFIID subunit 15b isoform X2 [Cucumis...	[more]
XP_016902121.1	7.25e-285	91.26	PREDICTED: transcription initiation factor TFIID subunit 15b isoform X3 [Cucumis...	[more]

BLAST of CsGy1G023820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYC4	2.94e-313	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533590 PE=4 SV=1	[more]
A0A1S3C4S9	2.05e-299	97.17	transcription initiation factor TFIID subunit 15b isoform X1 OS=Cucumis melo OX=...	[more]
A0A1S4E2C0	4.79e-286	91.87	transcription initiation factor TFIID subunit 15b isoform X2 OS=Cucumis melo OX=...	[more]
A0A1S4E1L8	3.51e-285	91.26	transcription initiation factor TFIID subunit 15b isoform X3 OS=Cucumis melo OX=...	[more]
A0A6J1HM15	4.05e-269	85.96	transcription initiation factor TFIID subunit 15b-like OS=Cucurbita moschata OX=...	[more]

BLAST of CsGy1G023820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58470.1	5.9e-94	58.35	TBP-associated factor 15B	[more]
AT5G58470.2	5.9e-94	58.35	TBP-associated factor 15B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 119..145 e-value: 1.8E-7 score: 40.8
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 117..148 e-value: 3.7E-8 score: 32.5
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 121..142
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 117..148 score: 10.150199
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 351..437 e-value: 4.2E-9 score: 46.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 352..381 e-value: 6.3E-7 score: 29.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 350..441 score: 14.28293
None	No IPR available	GENE3D	4.10.1060.10		coord: 115..149 e-value: 3.1E-15 score: 57.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 462..491
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..491
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR12999	ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED	coord: 301..491 coord: 2..299
None	No IPR available	PANTHER	PTHR12999:SF20	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B	coord: 301..491 coord: 2..299
None	No IPR available	CDD	cd12280	RRM_FET	coord: 352..438 e-value: 5.41206E-36 score: 126.273
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 330..485 e-value: 2.4E-20 score: 74.9
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 348..469
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 110..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G023820.2	CsGy1G023820.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003676	nucleic acid binding