Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCAACGTTGAATTCTGGAATTGTTTTCACTGAAGGTACGTAGAGAGATGTTTTTTTTTTTTTTTCTAATTTTGTGTTTTCTGTTCTTTCATGTGATTCAATTTTGTTGAGTTCTTTGGTGATGATGTTTCTGGCAGACATAGCCGACGGTAGTGATTCGGATACGAATTCAGCTGAAGGATCGGATTACTACGAGCCGATCTCGGCCATTGATGGTGAAGAATCGGATATAGCTGAATCAGAGGACGAAACCTACAGCTCCGATCCTCATTTCCACCAGTTACCTAACGGATGCGGTGTAGAGAATGCAGTTTCATCTCTTACCTTGAACGACGATGTGGAGAGAAGGTGTAGTGATGACGAAGAGGAGGAGAGGATGAGAGTTGCTTCTGATTCGGCGATAAGAATGGCTTTTAGAGAGGATGAAACTCGGCGGAATGCACCGCTGTCGCCGGAGAATACAACGAGAATTATGGAAGCCATGCGCGGCATTTCGTTTGATGGCTCTGCTCCAGATTGGACTCGGATTGTGTCCGAGGATCGTTGGATTGATCAGCTTCGAAGGCTTAGGCAAACGCCTACTGTTTCCAATAGTCTCGGGAACTGA
mRNA sequence
ATGAATGCAACGTTGAATTCTGGAATTGTTTTCACTGAAGACATAGCCGACGGTAGTGATTCGGATACGAATTCAGCTGAAGGATCGGATTACTACGAGCCGATCTCGGCCATTGATGGTGAAGAATCGGATATAGCTGAATCAGAGGACGAAACCTACAGCTCCGATCCTCATTTCCACCAGTTACCTAACGGATGCGGTGTAGAGAATGCAGTTTCATCTCTTACCTTGAACGACGATGTGGAGAGAAGGTGTAGTGATGACGAAGAGGAGGAGAGGATGAGAGTTGCTTCTGATTCGGCGATAAGAATGGCTTTTAGAGAGGATGAAACTCGGCGGAATGCACCGCTGTCGCCGGAGAATACAACGAGAATTATGGAAGCCATGCGCGGCATTTCGTTTGATGGCTCTGCTCCAGATTGGACTCGGATTGTGTCCGAGGATCGTTGGATTGATCAGCTTCGAAGGCTTAGGCAAACGCCTACTGTTTCCAATAGTCTCGGGAACTGA
Coding sequence (CDS)
ATGAATGCAACGTTGAATTCTGGAATTGTTTTCACTGAAGACATAGCCGACGGTAGTGATTCGGATACGAATTCAGCTGAAGGATCGGATTACTACGAGCCGATCTCGGCCATTGATGGTGAAGAATCGGATATAGCTGAATCAGAGGACGAAACCTACAGCTCCGATCCTCATTTCCACCAGTTACCTAACGGATGCGGTGTAGAGAATGCAGTTTCATCTCTTACCTTGAACGACGATGTGGAGAGAAGGTGTAGTGATGACGAAGAGGAGGAGAGGATGAGAGTTGCTTCTGATTCGGCGATAAGAATGGCTTTTAGAGAGGATGAAACTCGGCGGAATGCACCGCTGTCGCCGGAGAATACAACGAGAATTATGGAAGCCATGCGCGGCATTTCGTTTGATGGCTCTGCTCCAGATTGGACTCGGATTGTGTCCGAGGATCGTTGGATTGATCAGCTTCGAAGGCTTAGGCAAACGCCTACTGTTTCCAATAGTCTCGGGAACTGA
Protein sequence
MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFHQLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPENTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN*
Homology
BLAST of CsGy1G023730 vs. NCBI nr
Match:
XP_004153363.1 (uncharacterized protein LOC101214045 [Cucumis sativus] >KGN65844.1 hypothetical protein Csa_023255 [Cucumis sativus])
HSP 1 Score: 331 bits (849), Expect = 2.51e-114
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60
MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH
Sbjct: 1 MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60
Query: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120
QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN
Sbjct: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
BLAST of CsGy1G023730 vs. NCBI nr
Match:
XP_008457323.1 (PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo])
HSP 1 Score: 316 bits (810), Expect = 2.22e-108
Identity = 162/169 (95.86%), Postives = 164/169 (97.04%), Query Frame = 0
Query: 1 MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60
MNATLNSGIVF+EDI DGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSD HFH
Sbjct: 1 MNATLNSGIVFSEDIVDGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDTHFH 60
Query: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120
QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMR ASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
NTTRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQTPTVSNS+ N
Sbjct: 121 NTTRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 169
BLAST of CsGy1G023730 vs. NCBI nr
Match:
XP_038894769.1 (uncharacterized protein LOC120083197 [Benincasa hispida])
HSP 1 Score: 303 bits (776), Expect = 3.39e-103
Identity = 155/169 (91.72%), Postives = 161/169 (95.27%), Query Frame = 0
Query: 1 MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60
MNATLNSGIVF+E+IADGSDSDTNSAEGSDYYEPISAIDGEESD A SE+ETYSSDPHFH
Sbjct: 1 MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSENETYSSDPHFH 60
Query: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120
L NGCGVENAVSSL+LNDDVERRCSDDEEEERMR ASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61 HLSNGCGVENAVSSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
N TRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQTP+VSN+ GN
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNFGN 169
BLAST of CsGy1G023730 vs. NCBI nr
Match:
KAA0060014.1 (uncharacterized protein E6C27_scaffold340G00590 [Cucumis melo var. makuwa] >TYJ97272.1 uncharacterized protein E5676_scaffold194G00660 [Cucumis melo var. makuwa])
HSP 1 Score: 293 bits (751), Expect = 7.08e-99
Identity = 150/156 (96.15%), Postives = 151/156 (96.79%), Query Frame = 0
Query: 14 DIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFHQLPNGCGVENAVS 73
DI DGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSD HFHQLPNGCGVENAVS
Sbjct: 48 DIVDGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDTHFHQLPNGCGVENAVS 107
Query: 74 SLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPENTTRIMEAMRGIS 133
SLTLNDDVERRCSDDEEEERMR ASDSAIRMAFREDETRRNAPLSPENTTRIMEAMRGIS
Sbjct: 108 SLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPENTTRIMEAMRGIS 167
Query: 134 FDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
F GSAPDWTRIVSEDRWIDQLRRLRQTPTVSNS+ N
Sbjct: 168 FGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 203
BLAST of CsGy1G023730 vs. NCBI nr
Match:
XP_022970483.1 (uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970484.1 uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970485.1 uncharacterized protein LOC111469451 [Cucurbita maxima])
HSP 1 Score: 291 bits (744), Expect = 2.56e-98
Identity = 149/169 (88.17%), Postives = 156/169 (92.31%), Query Frame = 0
Query: 1 MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60
MNA+LNSG+VF+EDIADGSDSDTNSAEGSDYYEPISAIDGEESD A S+DETYSSD H H
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDETYSSDTHLH 60
Query: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120
LPNGC VENAVSSL+LNDDVERRCSD+EEEE MR ASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61 HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
N TRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQTPT N+ GN
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169
BLAST of CsGy1G023730 vs. ExPASy TrEMBL
Match:
A0A0A0LXQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533510 PE=4 SV=1)
HSP 1 Score: 331 bits (849), Expect = 1.21e-114
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60
MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH
Sbjct: 1 MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60
Query: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120
QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN
Sbjct: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
BLAST of CsGy1G023730 vs. ExPASy TrEMBL
Match:
A0A1S3C5C0 (uncharacterized protein LOC103497044 OS=Cucumis melo OX=3656 GN=LOC103497044 PE=4 SV=1)
HSP 1 Score: 316 bits (810), Expect = 1.07e-108
Identity = 162/169 (95.86%), Postives = 164/169 (97.04%), Query Frame = 0
Query: 1 MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60
MNATLNSGIVF+EDI DGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSD HFH
Sbjct: 1 MNATLNSGIVFSEDIVDGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDTHFH 60
Query: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120
QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMR ASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
NTTRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQTPTVSNS+ N
Sbjct: 121 NTTRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 169
BLAST of CsGy1G023730 vs. ExPASy TrEMBL
Match:
A0A5A7UY79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00660 PE=4 SV=1)
HSP 1 Score: 293 bits (751), Expect = 3.43e-99
Identity = 150/156 (96.15%), Postives = 151/156 (96.79%), Query Frame = 0
Query: 14 DIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFHQLPNGCGVENAVS 73
DI DGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSD HFHQLPNGCGVENAVS
Sbjct: 48 DIVDGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDTHFHQLPNGCGVENAVS 107
Query: 74 SLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPENTTRIMEAMRGIS 133
SLTLNDDVERRCSDDEEEERMR ASDSAIRMAFREDETRRNAPLSPENTTRIMEAMRGIS
Sbjct: 108 SLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPENTTRIMEAMRGIS 167
Query: 134 FDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
F GSAPDWTRIVSEDRWIDQLRRLRQTPTVSNS+ N
Sbjct: 168 FGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 203
BLAST of CsGy1G023730 vs. ExPASy TrEMBL
Match:
A0A6J1I3Z1 (uncharacterized protein LOC111469451 OS=Cucurbita maxima OX=3661 GN=LOC111469451 PE=4 SV=1)
HSP 1 Score: 291 bits (744), Expect = 1.24e-98
Identity = 149/169 (88.17%), Postives = 156/169 (92.31%), Query Frame = 0
Query: 1 MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60
MNA+LNSG+VF+EDIADGSDSDTNSAEGSDYYEPISAIDGEESD A S+DETYSSD H H
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDETYSSDTHLH 60
Query: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120
LPNGC VENAVSSL+LNDDVERRCSD+EEEE MR ASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61 HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
N TRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQTPT N+ GN
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169
BLAST of CsGy1G023730 vs. ExPASy TrEMBL
Match:
A0A6J1HLE1 (uncharacterized protein LOC111464656 OS=Cucurbita moschata OX=3662 GN=LOC111464656 PE=4 SV=1)
HSP 1 Score: 288 bits (738), Expect = 1.02e-97
Identity = 148/169 (87.57%), Postives = 155/169 (91.72%), Query Frame = 0
Query: 1 MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60
MNA+LNSG+VF+EDIADGSDSDTNSAEGSDYYEPISAIDGEESD A S+DE YSSD H H
Sbjct: 1 MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDEPYSSDTHLH 60
Query: 61 QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120
LPNGC VENAVSSL+LNDDVERRCSD+EEEE MR ASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61 HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120
Query: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169
N TRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQTPT N+ GN
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169
BLAST of CsGy1G023730 vs. TAIR 10
Match:
AT1G07020.1 (unknown protein; Has 39 Blast hits to 39 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 3; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )
HSP 1 Score: 111.7 bits (278), Expect = 5.9e-25
Identity = 75/148 (50.68%), Postives = 95/148 (64.19%), Query Frame = 0
Query: 18 GSDSDTNSAEGS-DYYEPISAIDGEESDIAESEDETYSSDPHFHQLPNG-CGVENA---V 77
GSDSD+NS E S DYYEPISA+D S+ + E+++Y L NG C + +A +
Sbjct: 8 GSDSDSNSVEDSQDYYEPISAVDLYNSN--DDEEDSYLPIGG-DGLSNGHCMIPDAEVGI 67
Query: 78 SSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPENTTRIMEAMRGI 137
SS+++ND+ +D EEE + IR AF EDE RR +PL EN R+MEAMR I
Sbjct: 68 SSISINDN-----TDSEEETETETGPE--IRRAFEEDERRRRSPLVEENAVRVMEAMRAI 127
Query: 138 SFDGSAPDWTRIVSEDRWIDQLRRLRQT 161
SF G+APDW V+EDRWIDQLRRLR T
Sbjct: 128 SFPGTAPDWASDVNEDRWIDQLRRLRTT 145
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_004153363.1 | 2.51e-114 | 100.00 | uncharacterized protein LOC101214045 [Cucumis sativus] >KGN65844.1 hypothetical ... | [more] |
XP_008457323.1 | 2.22e-108 | 95.86 | PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo] | [more] |
XP_038894769.1 | 3.39e-103 | 91.72 | uncharacterized protein LOC120083197 [Benincasa hispida] | [more] |
KAA0060014.1 | 7.08e-99 | 96.15 | uncharacterized protein E6C27_scaffold340G00590 [Cucumis melo var. makuwa] >TYJ9... | [more] |
XP_022970483.1 | 2.56e-98 | 88.17 | uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970484.1 uncharac... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LXQ6 | 1.21e-114 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533510 PE=4 SV=1 | [more] |
A0A1S3C5C0 | 1.07e-108 | 95.86 | uncharacterized protein LOC103497044 OS=Cucumis melo OX=3656 GN=LOC103497044 PE=... | [more] |
A0A5A7UY79 | 3.43e-99 | 96.15 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1I3Z1 | 1.24e-98 | 88.17 | uncharacterized protein LOC111469451 OS=Cucurbita maxima OX=3661 GN=LOC111469451... | [more] |
A0A6J1HLE1 | 1.02e-97 | 87.57 | uncharacterized protein LOC111464656 OS=Cucurbita moschata OX=3662 GN=LOC1114646... | [more] |
Match Name | E-value | Identity | Description | |
AT1G07020.1 | 5.9e-25 | 50.68 | unknown protein; Has 39 Blast hits to 39 proteins in 17 species: Archae - 0; Bac... | [more] |