CsGy1G023660 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G023660
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	6,7-dimethyl-8-ribityllumazine synthase
Location	Gy14Chr1: 22449323 .. 22449772 (-)
RNA-Seq Expression	CsGy1G023660
Synteny	CsGy1G023660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAATAGTTTAAAGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGATTTAATCAGAGTCGTTCATCTCAACGGCCTCGTCCAAGAGTTCTCTCCCCCCCTCACCGCCGCTCAGATTCTCCAAGCCAATCCCGGCCACCTCCTCACCACTCCCTCCTCCCACGACCACCGTCTCGTCCGCCGTGTCAACATTCTCTCACCCCAATCTCACCTCCGACGAGGCGCCATTTATTTCTTGATCCCCGCTGATCATTCCGACCACGGCCACCGCAAGCCACCTGCTAAAAAACAATCCTCCGCCGTCTCCGGTGCCGGCGTTTTCCCTGAATCTGAGGATGTGATTGTGTTGAAGAAGGATAAACCCAGGCGCCGAGATCGCCGGAGGAGTCGTAGCTACGGCGGGGCGTGGCAGCCTCATTTACACAGCATTAGTGAAGATTAG

mRNA sequence

ATGGGTAATAGTTTAAAGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGATTTAATCAGAGTCGTTCATCTCAACGGCCTCGTCCAAGAGTTCTCTCCCCCCCTCACCGCCGCTCAGATTCTCCAAGCCAATCCCGGCCACCTCCTCACCACTCCCTCCTCCCACGACCACCGTCTCGTCCGCCGTGTCAACATTCTCTCACCCCAATCTCACCTCCGACGAGGCGCCATTTATTTCTTGATCCCCGCTGATCATTCCGACCACGGCCACCGCAAGCCACCTGCTAAAAAACAATCCTCCGCCGTCTCCGGTGCCGGCGTTTTCCCTGAATCTGAGGATGTGATTGTGTTGAAGAAGGATAAACCCAGGCGCCGAGATCGCCGGAGGAGTCGTAGCTACGGCGGGGCGTGGCAGCCTCATTTACACAGCATTAGTGAAGATTAG

Coding sequence (CDS)

ATGGGTAATAGTTTAAAGCATTGTTTAGGTTGTATTCTTCCTTGTGGAGCTTTGGATTTAATCAGAGTCGTTCATCTCAACGGCCTCGTCCAAGAGTTCTCTCCCCCCCTCACCGCCGCTCAGATTCTCCAAGCCAATCCCGGCCACCTCCTCACCACTCCCTCCTCCCACGACCACCGTCTCGTCCGCCGTGTCAACATTCTCTCACCCCAATCTCACCTCCGACGAGGCGCCATTTATTTCTTGATCCCCGCTGATCATTCCGACCACGGCCACCGCAAGCCACCTGCTAAAAAACAATCCTCCGCCGTCTCCGGTGCCGGCGTTTTCCCTGAATCTGAGGATGTGATTGTGTTGAAGAAGGATAAACCCAGGCGCCGAGATCGCCGGAGGAGTCGTAGCTACGGCGGGGCGTGGCAGCCTCATTTACACAGCATTAGTGAAGATTAG

Protein sequence

MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED*

Homology

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BLAST of CsGy1G023660 vs. NCBI nr
Match: XP_011658739.1 (uncharacterized protein LOC105436080 [Cucumis sativus] >KGN65837.1 hypothetical protein Csa_023235 [Cucumis sativus])

HSP 1 Score: 310 bits (793), Expect = 1.92e-106
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR
Sbjct: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60

Query: 61  LVRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLK 120
           LVRRVNILSPQSHLRRG IYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLK
Sbjct: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLK 120

Query: 121 KDKPRRRDRRRSRSYGGAWQPHLHSISED 149
           KDKPRRRDRRRSRSYGGAWQPHLHSISED
Sbjct: 121 KDKPRRRDRRRSRSYGGAWQPHLHSISED 149

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BLAST of CsGy1G023660 vs. NCBI nr
Match: KAA0036509.1 (uncharacterized protein E6C27_scaffold6629G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 272 bits (695), Expect = 2.01e-91
Identity = 136/156 (87.18%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPL AA+ILQANPGH+LTTPSS DHR
Sbjct: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLAAAEILQANPGHVLTTPSSDDHR 60

Query: 61  LVRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPES------- 120
           LVRRVNILSP+SHLRRG IYFLIPADHSDH  R  PAKKQSSAVS  GVFPES       
Sbjct: 61  LVRRVNILSPESHLRRGGIYFLIPADHSDH--RTKPAKKQSSAVSSGGVFPESDDLSHRL 120

Query: 121 EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED 149
           EDVIVLKKDKP RRDRRRSRSYGGAWQPHLHSISED
Sbjct: 121 EDVIVLKKDKPSRRDRRRSRSYGGAWQPHLHSISED 154

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BLAST of CsGy1G023660 vs. NCBI nr
Match: XP_038895775.1 (uncharacterized protein LOC120083938 [Benincasa hispida])

HSP 1 Score: 234 bits (596), Expect = 2.02e-76
Identity = 120/156 (76.92%), Postives = 129/156 (82.69%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL++CLGCILPCGALDLIRVVHLNG VQEFSPPL+AA+IL ANPGH+LTTPSS DHR
Sbjct: 1   MGNSLRNCLGCILPCGALDLIRVVHLNGHVQEFSPPLSAAEILHANPGHVLTTPSSDDHR 60

Query: 61  LVRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPES------- 120
           LVRRV ILSP+SHLRRG IYFLIPAD SDH       +K +   SGAGVFPES       
Sbjct: 61  LVRRVTILSPESHLRRGGIYFLIPAD-SDH-------RKAAKKPSGAGVFPESDDLSHGL 120

Query: 121 EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED 149
           EDVIVLKK KP RRDRRRSRSYGG W+PHLHSISED
Sbjct: 121 EDVIVLKKAKPSRRDRRRSRSYGGTWRPHLHSISED 148

[Close]

BLAST of CsGy1G023660 vs. NCBI nr
Match: XP_022949253.1 (uncharacterized protein LOC111452664 [Cucurbita moschata])

HSP 1 Score: 209 bits (533), Expect = 7.23e-67
Identity = 112/150 (74.67%), Postives = 120/150 (80.00%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL HCLGC+LPCGALDLIRVVHLNG VQ FSPPL A +IL +NPGH+LTTPSS DH 
Sbjct: 1   MGNSLMHCLGCVLPCGALDLIRVVHLNGHVQRFSPPLLAGEILNSNPGHVLTTPSSDDHS 60

Query: 61  LVRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESE-DVIVL 120
           L+RR  +LSPQSHLRRG IYFLIPA  SDH  RKPP K  SS  S A  FP+S  DVIVL
Sbjct: 61  LLRRFTLLSPQSHLRRGRIYFLIPAS-SDH--RKPP-KNLSSPNSAA--FPDSNVDVIVL 120

Query: 121 KKDKPRRRDRRRSRSYGGAWQPHLHSISED 149
           KK K   R+RRRSRS GGAWQPHLHSISED
Sbjct: 121 KKPKSGSRNRRRSRSCGGAWQPHLHSISED 144

[Close]

BLAST of CsGy1G023660 vs. NCBI nr
Match: XP_022964962.1 (uncharacterized protein LOC111464913 [Cucurbita moschata])

HSP 1 Score: 208 bits (529), Expect = 3.70e-66
Identity = 108/156 (69.23%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+HCLGC+LPCGALDLIRVVHLNG VQEFSPP+ AA+IL ANPGH+LTTPS   H 
Sbjct: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60

Query: 61  LVRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPES------- 120
           LVR V ILSP+SHLRRG IYFLIPA  SDH   +  AK  SSA S   VFPE        
Sbjct: 61  LVRHVTILSPESHLRRGGIYFLIPAS-SDH---RKAAKNPSSATSSDAVFPEPNDLTHRM 120

Query: 121 EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED 149
           EDVIV KK KP RRDRR SR+  GAW+PHL SI+ED
Sbjct: 121 EDVIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 152

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BLAST of CsGy1G023660 vs. ExPASy TrEMBL
Match: A0A0A0LYB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533440 PE=4 SV=1)

HSP 1 Score: 310 bits (793), Expect = 9.28e-107
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR
Sbjct: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60

Query: 61  LVRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLK 120
           LVRRVNILSPQSHLRRG IYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLK
Sbjct: 61  LVRRVNILSPQSHLRRGGIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLK 120

Query: 121 KDKPRRRDRRRSRSYGGAWQPHLHSISED 149
           KDKPRRRDRRRSRSYGGAWQPHLHSISED
Sbjct: 121 KDKPRRRDRRRSRSYGGAWQPHLHSISED 149

[Close]

BLAST of CsGy1G023660 vs. ExPASy TrEMBL
Match: A0A5A7T586 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6629G00010 PE=4 SV=1)

HSP 1 Score: 272 bits (695), Expect = 9.72e-92
Identity = 136/156 (87.18%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPL AA+ILQANPGH+LTTPSS DHR
Sbjct: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLAAAEILQANPGHVLTTPSSDDHR 60

Query: 61  LVRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPES------- 120
           LVRRVNILSP+SHLRRG IYFLIPADHSDH  R  PAKKQSSAVS  GVFPES       
Sbjct: 61  LVRRVNILSPESHLRRGGIYFLIPADHSDH--RTKPAKKQSSAVSSGGVFPESDDLSHRL 120

Query: 121 EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED 149
           EDVIVLKKDKP RRDRRRSRSYGGAWQPHLHSISED
Sbjct: 121 EDVIVLKKDKPSRRDRRRSRSYGGAWQPHLHSISED 154

[Close]

BLAST of CsGy1G023660 vs. ExPASy TrEMBL
Match: A0A6J1GBI2 (uncharacterized protein LOC111452664 OS=Cucurbita moschata OX=3662 GN=LOC111452664 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 3.50e-67
Identity = 112/150 (74.67%), Postives = 120/150 (80.00%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL HCLGC+LPCGALDLIRVVHLNG VQ FSPPL A +IL +NPGH+LTTPSS DH 
Sbjct: 1   MGNSLMHCLGCVLPCGALDLIRVVHLNGHVQRFSPPLLAGEILNSNPGHVLTTPSSDDHS 60

Query: 61  LVRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESE-DVIVL 120
           L+RR  +LSPQSHLRRG IYFLIPA  SDH  RKPP K  SS  S A  FP+S  DVIVL
Sbjct: 61  LLRRFTLLSPQSHLRRGRIYFLIPAS-SDH--RKPP-KNLSSPNSAA--FPDSNVDVIVL 120

Query: 121 KKDKPRRRDRRRSRSYGGAWQPHLHSISED 149
           KK K   R+RRRSRS GGAWQPHLHSISED
Sbjct: 121 KKPKSGSRNRRRSRSCGGAWQPHLHSISED 144

[Close]

BLAST of CsGy1G023660 vs. ExPASy TrEMBL
Match: A0A6J1HJ26 (uncharacterized protein LOC111464913 OS=Cucurbita moschata OX=3662 GN=LOC111464913 PE=4 SV=1)

HSP 1 Score: 208 bits (529), Expect = 1.79e-66
Identity = 108/156 (69.23%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+HCLGC+LPCGALDLIRVVHLNG VQEFSPP+ AA+IL ANPGH+LTTPS   H 
Sbjct: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60

Query: 61  LVRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPES------- 120
           LVR V ILSP+SHLRRG IYFLIPA  SDH   +  AK  SSA S   VFPE        
Sbjct: 61  LVRHVTILSPESHLRRGGIYFLIPAS-SDH---RKAAKNPSSATSSDAVFPEPNDLTHRM 120

Query: 121 EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED 149
           EDVIV KK KP RRDRR SR+  GAW+PHL SI+ED
Sbjct: 121 EDVIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 152

[Close]

BLAST of CsGy1G023660 vs. ExPASy TrEMBL
Match: A0A6J1HZ69 (uncharacterized protein LOC111469438 OS=Cucurbita maxima OX=3661 GN=LOC111469438 PE=4 SV=1)

HSP 1 Score: 207 bits (527), Expect = 3.61e-66
Identity = 108/156 (69.23%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+HCLGC+LPCGALDLIRVVHLNG VQEFSPP+ AA+IL ANPGH+LTTPS   H 
Sbjct: 1   MGNSLRHCLGCVLPCGALDLIRVVHLNGHVQEFSPPIAAAEILDANPGHVLTTPSDDHHH 60

Query: 61  LVRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPES------- 120
           LVR V ILSP+S+LRRG IYFLIPA  SDH   +  AKK SSA S   VFPE        
Sbjct: 61  LVRHVTILSPESNLRRGGIYFLIPAS-SDH---RKAAKKPSSATSSDAVFPEPNDLTHRM 120

Query: 121 EDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED 149
           EDVIV KK KP RRDRR SR+  GAW+PHL SI+ED
Sbjct: 121 EDVIVFKKAKPGRRDRRSSRAGSGAWRPHLLSINED 152

[Close]

BLAST of CsGy1G023660 vs. TAIR 10
Match: AT1G06980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 128.3 bits (321), Expect = 5.3e-30
Identity = 76/169 (44.97%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+ CL C+LPCGALDLIR+VHLNG V+E +  +TA +ILQANP H+L+ P S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRSITAGEILQANPNHVLSKPCSQG-- 60

Query: 61  LVRRVNILSPQSHLRRGAIYFLIPAD--------HSDHGHRKPPAKKQSSAVSGAGVFPE 120
           +VR++ ILSP+S L+RG+IYFLIP            D   RK   +  S+  +G  +  +
Sbjct: 61  VVRKILILSPESELKRGSIYFLIPDSSLPEKKRRRKDTPRRKKNLQNPSADAAGREIKGD 120

Query: 121 SEDVIVLKK-----------DKPRRRDRRRSRSYG-GAWQPHLHSISED 150
            E V + +K            K  R  RR SRS     W+P L SISED
Sbjct: 121 EECVKLCEKYLEEVVSSASTGKEHRHRRRHSRSASVSTWRPLLDSISED 167

[Close]

BLAST of CsGy1G023660 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 125.6 bits (314), Expect = 3.5e-29
Identity = 78/178 (43.82%), Postives = 103/178 (57.87%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHR 60
           MGNSL+ CL C+LPCGALDLIR+VHLNG V E + P+TA +ILQANP H+L+ P S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCSQG-- 60

Query: 61  LVRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQ-----SSAVSGAGVFPES-- 120
           +VR++ ILSP+S L+RG+IYFLIP D S    +K   +K+         SG  +  +   
Sbjct: 61  VVRKILILSPESELKRGSIYFLIP-DTSMPEKKKTKKRKELRCRKKPLESGNDINSDHVS 120

Query: 121 -----------------EDVIVLKK----DKPRRRDRRRSRSYG-GAWQPHLHSISED 150
                            EDV++ +K     K  R  R+ SRS     W+PHL SI+ED
Sbjct: 121 TNKDLDGHCLTLCEKYLEDVMLSEKMSSAGKENRHRRKHSRSASVSTWRPHLDSITED 175

[Close]

BLAST of CsGy1G023660 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21
Identity = 67/190 (35.26%), Postives = 98/190 (51.58%), Query Frame = 0


Query: 1   MGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSS---- 60
           M  +++ C+ CILPCGALD+IR+VH NG V+E S  +TA++I++A+P H+L  PSS    
Sbjct: 1   MKETIRCCIACILPCGALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSD 60

Query: 61  HDHRLV---RRVNILSPQSHLRRGAIYFLIPADHSDH----GHRKPPAKKQSSAVSGAGV 120
           HD R V    ++ I+ P++ L+RG IYFL+PA  SD     G  +      ++ V     
Sbjct: 61  HDERDVISATKIVIVPPEAELQRGKIYFLMPATKSDKCAGGGKIRREKSNANAVVKKRSQ 120

Query: 121 F-------------PESEDV------------------IVLKKDKPRRRDRRRSRSYGGA 149
           +              ES DV                   +L +    ++DRR+ R   G 
Sbjct: 121 YRRQHRDGDEKCNGGESNDVKDKNYEKDLLISSDRYLTEILSEKVATQKDRRKGRV--GV 180

[Close]

BLAST of CsGy1G023660 vs. TAIR 10
Match: AT5G50090.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 2.2e-07
Identity = 45/148 (30.41%), Postives = 65/148 (43.92%), Query Frame = 0


Query: 15  CGALDLIRVV--HLNGLVQEFSPPLTAAQILQANPGH----------LLTTPSSHDHRL- 74
           C A+D  RVV  H NG  ++ S P++A+ +++ NPGH          L +  S H   L 
Sbjct: 4   CQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHGGPLR 63

Query: 75  VRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGAGVFPESEDVIVLKK 134
           + R+ +L P   L  G +Y LI       G       K      G+    + E V  +  
Sbjct: 64  LTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESKGSD--DKLEMVKAINS 123

Query: 135 DKPRRRDRRRSRS-YGGAWQPHLHSISE 149
            K    D+ + RS    +WQP L SISE
Sbjct: 124 TKLDNEDQEKERSRISRSWQPSLQSISE 149

[Close]

BLAST of CsGy1G023660 vs. TAIR 10
Match: AT5G50090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 8.3e-07
Identity = 48/158 (30.38%), Postives = 68/158 (43.04%), Query Frame = 0


Query: 15  CGALDLIRVV--HLNGLVQEFSPPLTAAQILQANPGH----------LLTTPSSHDHRL- 74
           C A+D  RVV  H NG  ++ S P++A+ +++ NPGH          L +  S H   L 
Sbjct: 4   CQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHGGPLR 63

Query: 75  VRRVNILSPQSHLRRGAIYFLIPADHSDHGHRKPPAKKQSSAVSGA-----------GVF 134
           + R+ +L P   L  G +Y LI       G       K      G+              
Sbjct: 64  LTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESKGSDDKLEMVKAINSTK 123

Query: 135 PESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISE 149
            ++ED + +KK +  R   R SRS    WQP L SISE
Sbjct: 124 LDNEDQLQMKKQEKER--SRISRS----WQPSLQSISE 155

The following BLAST results are available for this feature:

BLAST of CsGy1G023660 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G023660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658739.1	1.92e-106	99.33	uncharacterized protein LOC105436080 [Cucumis sativus] >KGN65837.1 hypothetical ...	[more]
KAA0036509.1	2.01e-91	87.18	uncharacterized protein E6C27_scaffold6629G00010 [Cucumis melo var. makuwa]	[more]
XP_038895775.1	2.02e-76	76.92	uncharacterized protein LOC120083938 [Benincasa hispida]	[more]
XP_022949253.1	7.23e-67	74.67	uncharacterized protein LOC111452664 [Cucurbita moschata]	[more]
XP_022964962.1	3.70e-66	69.23	uncharacterized protein LOC111464913 [Cucurbita moschata]	[more]

BLAST of CsGy1G023660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYB2	9.28e-107	99.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533440 PE=4 SV=1	[more]
A0A5A7T586	9.72e-92	87.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1GBI2	3.50e-67	74.67	uncharacterized protein LOC111452664 OS=Cucurbita moschata OX=3662 GN=LOC1114526...	[more]
A0A6J1HJ26	1.79e-66	69.23	uncharacterized protein LOC111464913 OS=Cucurbita moschata OX=3662 GN=LOC1114649...	[more]
A0A6J1HZ69	3.61e-66	69.23	uncharacterized protein LOC111469438 OS=Cucurbita maxima OX=3661 GN=LOC111469438...	[more]

BLAST of CsGy1G023660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06980.1	5.3e-30	44.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G30230.1	3.5e-29	43.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G29195.1	1.6e-21	35.26	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G50090.2	2.2e-07	30.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G50090.1	8.3e-07	30.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..148 e-value: 9.6E-28 score: 97.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..149
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..149
None	No IPR available	PANTHER	PTHR33052:SF26	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	coord: 1..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G023660.1	CsGy1G023660.1	mRNA