CsGy1G023610 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G023610
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	SAGA-associated factor 11
Location	Gy14Chr1: 22389023 .. 22394372 (-)
RNA-Seq Expression	CsGy1G023610
Synteny	CsGy1G023610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGCCCTCTTCTTTCTCGATGAAACTTCCCTCTTTCTGCAATCTTCTCCAGTCCTACTGTGTTTGGATTTGTACGCTCTCTCCATTTTTGCTTCGACTTCAACTTCATACAAGTACGTACGCCTAAACCTTTCTACATTTTTCAATTTTCCTCATTGATTTTGCCAATATTACGAACGTTTTTCCAGTAAAACAATTTCCAGAAATGTTGCGTTTGATGCCAGTTTGCAATATTTAGAATGTTAGAAGATTTCTTTTCTTTTTTTGTATTTTGTTTGATCGGTTAGTTTTACAAGTTTGATTCATTTCAGAATGTGTAAATCCTCTCGTTAGTCTATTATTCAACTTCTGTTTTTGATGATCCTTGAAATTGGATTTATTTTTTTTACTGTGTTGCTTTAAACTTGTTCAGTCGTTGTGTTTAATGACATTTGTTCTGGTTATTATGTTTCTAGGCTTATATTGAAACTCCTCCTGCTTCTAGATCCATGTCAATGCCTAATGAGGACAATGCATCTTCACAAACTCAGGTAGCTTTTCCCTTTATGTTTCTTTTTCATTTTCTTGTTTGCATTTAGCACCTCAGTATATGAATAATGGGAAATGACGGTAAAACCTATAATTGCTTTGTTTACGGTGAAGAATGAAAACTTGAATTAGTTGTATGGACTATGCGTGTTACAAGAGAAAAAATGGCATTATAATATTGATGTGCCTCAAAGTATTTCTAACCGCTGAAATCCGTTGGTTTCTTGAATTAGTTACTTCAGGAAAGAATGAACAATGGGACTATACCACTGTTATAAAACGGTTTACAAGCCAAATGGTCTAACTTGCTTAACTTTCAAGCTATTAAATAATCCTTACCTTATCAATCCAACTGGTTACTTGCCACAACGAAACTACTTAATCAGTGAGCTTTCTTTCACAGACTTCCCCCCCTCAGTTTAATGATACTCAACCAGATTGTTCCCCTGAAATTGGATTTTTATTTTTCTGTGAGATTTGTTGCAGTAAGTTTTCTTTATTGTCACTGGTATGTGCTAGAAATAGAATTGTAAAAAAATATTAAGTCATGTGTGTACAATATATGATATTTCTACCTGGATTATCAAGAAGGTTAAGATGCATCTAGCTGGTTCTTTTGAAAGGATCTTTAGCAATGGTCTGTCAGCACCAATGTTTTGAAAGTGTAAGGCGTCTCAAGCTTGTCCTCTTAAAGAGGCTAGGGATAAGCCGCAAGTTGAGACATTTGGTTCAATTTTAATAACAATTACACAAATACTAAATTTGTACATTCACATATATATAGTGTGGTAAGAAACCAACTTTTCGTTGAGAAAAATAGAAAATTATAAGGGCATACAACAAACAAACCCGAACAAAAGAGTCTTGAAGAAAAAAATTACAGGAAAGAACTCCAATCCAAAGAAGAAGAAAAAGAAGACAATGGTCATAATTACCAAGAGGTCTTGTAACTGAGGCCTAAAGGGAGATATTAAACCTAGTAGCCATCTCCCAAGCCTCTCACTCGAATGCTCAACCTCTATAAAGTCACAAGTGACCACTTAAATAAAACATAATAGTCATATAAGTACAAAAAAGATCACTCCGGTAAATGGACACTTTATTGAAAATTTTGACAGGTTATTCTCAATGCAACGACTATCATCACTAAGCCTAGGTTGCAAAGATAGCAATAGCCAATACAGCTCATGTATAAACATAATATCATTACATAAAAACTTATATCTTTCGTAATAACGGCCTAATGGGGCAAATTGATATCATTCGTCTGATTGATACATGGGACATAAAGACTTCAACATTTAGTGTGTTTGGCGTAGAGACATAAGGCCTCTTATGCTTCAAAGAAGGTGTAAGTTTCAAGGCTTAGTCTTAGTATGGGTAATGGTCAAACATGTCATGGAAACTCAAGAAGTATAGTCGTATTAGTTTTCAATTTTTGATTTCCTTATTAGAAGACACATAGCTAACTGGTATTTCTTTTCCTCATATTTGCAGCTTTCATCTAATTTGTTTGGGGATCTCCTGGATTCCGTGATTGTTGATATTGCATCGGAATGCCATCGAATAGCAAGGTTAGGTCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCAGCACAAGCACGAGTAAGAGTAGCAGATTCTAGCAATAGTAGTGAGGCAAACGGCAAATATGTAGTTGATATTTTTGGACAAACTCATCCATCTGTTGCCAACGAGATATTTGATTGCATGAATTGTGGTCGATCAATTATGGCTGGGAGATTTGCCCCTCATTTAGAGAAATGCATGGGAAGGGTAACTCTCTGCCCTGTAATTAATATATGTTTTTCAGAAACGTTCCGCTTCTTTTTTGTTAATCTCTTTTCACTTTGTCTCATCAACTGTCTACTCTACTATAGGGTAGAAAGGCTCGTCCCAAAGTAACAAGAAGTAGTACAGCGGCTCAGAGCCGGTATTCACGAGGCAATCCTGTTTCTGCATATTCCCCTTACCCCAATTCCACCAGCACGAATCGCTTACCTAATGGAACATCTAGTCTTGCAGGGGAGGAGTACTCAAATGGTACATCTGAAGACCCATGAACAGTGGAGCAATGGTTGAATGATTCCAATTTGAGAAAACATACTGTAATCTTAATATGCGCACAGGAATATAATGATATCTCCTGTCATGTTCAGTTTTTACATTACATGACTTCTTTGTATGAGTTATCATTACGTGGGAAAAAAATATATCATGTCTGGAATCTATACTATGAGTTCATTAATTTGAACTGTTCCAAATTTTGATGATGAAGATCTTGTACAGAAGTTCGAGGAAATGGAAGTTAAATGCAATTCTAATTTGGTGTCTTCAATTTCCATTATAAAATTGAGTGCAATTGGCCAATCAGGATGTTTTTTCGATGTGGGGTTCTATTTTTGTGGTTACCTAGTTAGAACATACATATTTTTTCCAAGTTCCAAATCTTGTAAAAATTGAGTAGTGGTTGAGGATGCTATCTCCTATTGTTTCAAACATTTCAATTTGCTTCCATAAAGCTTTAGTCCTTTTCATATTAGATCCTCTGAAAGGGGCCACAAAGATTTTAAAGGCAGTTAAACTCTTGCTTTGTTCATTTTCTGACAGTTCCTAAGATATTCAGCTCTTTTGCTAGAAATTCTATCAACAATTTTATGGAAGCAAATTGCAGGAAGGTGGTCCAAAAGGTTGCCAATCTATGCTCAGCCACTGGAAAACTAGAATGTTAGTTAAGTCTGCATCAGTGGTCTCCACGCTCCACTTTCATTTGCTCAAACATTTCAAGTATGATTGCAGGGACCATAGGGCAGTGCTTGGAAGCTTATGAGACCTGAATGGCTGATTTCTTCTATGAGCATATTGAACAAGAATTGTGCTCAGATACGTCTCTCTCACACAAACCCTTCTTTTTTCTGCCATATAATTGCTTTGAATTTCCGACTGCAATACTTCTCAATTCTTAGGTTAATATGAAAAGAAGTGTTAGATAATAGCTTCTTGAATTTGGCCATTAGTTTTTTAACCTTCTCGTGCACTTGTATATGAAAGCAAGTGAGGCTAGAGCCAATATTGCAAAAATTATTGAATGTTTTTGTTTCTAGTAAAATGTGGTTATTACTTTTATACTTTTTAGATAGAGGAATATATTGTAAAATATTTTTGGTTATGCTTCCAACTGTCATGAAGGTGGCGACTCTACTAAATAACCTTTTTCCAAAACAGGATCTCAAATAATGATTAATTTCTTTAATTCTTATAAACCACAAACATACCACTAATGAAGTGCAGGTGCTCCACTCAGCTATAATAAAGTAGTTTCTTTATAAGATTTGGAGAAAAAATACGCCCTACCTCTCTGTCCTCTCTCTCAAGCAGGAATAAACACATCATCAAACACCGAAGGTATGATTATTATCTTCATTTAATCATGATTAGAAACTTTATGAATTTCTTATAGTTGTTGCCACACATTCCCTTATTTGAAAAGGTTTATCATTATCACTAATAAAAAAGTGGGAGGTGAATTTCCTTCCTTGGCAGAAAGATACAGAATAATTCGTTACTCACTCTTTTCTACTTTTATTTCATTTTCTCCATTATATTATAGCCCCTATTCCTTCATATACTACTTTAGATACTTAGATGTCACTGGTGGTCCGATGGATCTCTGAAAAAATTTTAGTTAGAGGAATTAAATTAATAACTTACATGAAACTGATAAGCTTTTGTAAATTATAAACTATGTTACTTCTGAGAGTGTTGGGTTTGTGTATATTTTTGCAGATCATATCTATCTAAATATAAATGATTAATTAATTGGGGAGCAGTTTTTCTCCGGCCTTGAAAGCTCATGGTAACATAATTTCAAATATTTATAGTTTTCAACGTTATTTCTGATATTTATTTGCACCATAAACTATCTTAAATCCAATAACTGTTTTTTTTTTTTAAATATAGCATTATAGTTGTGGTGTGTGAATTTGAACTGTCAATTAATAACTAAGAGTACCAAGATTTTATCAGTTAAGTAATTGGTAGATACAATCAAATGAGATTAAGTTATAAATTTGGTCTGTATGGTTTGAAGAAAATTAGAATTTAGTCCCTACAATTTTGAAAGTTAGAATTTAGTGTTTATGGCTTGTTTAAACCATGTGAGTAGTTTCTTAAAAAAAAAAAAACCTTGTAAATGGTCTCTTATTTTATCAAACTATATAGACTAAATTCTAGCTATAAATCATAAGGACTAAATTCTAACATTTTCCAATTTATAAGGGACCACATTTGCAATTTAAACATCAAGTTGTTGGATCATCTTCATTTGATCTACCAAGTCTCATCTACTAAAGAAACGAAAAGATTATATTTATAATGTTGTGAATAATTTCATTTATGAAATGCATTCTTGACAAACAAGATGATTTGAAATCTATATGACCAAATTATAGAAGATTGTCTTTTTAGCTTTTAGGATTCCTCCTTGAATAACTCCCTATTTGAGTTAATTGATCCAATTTTTTAGACACATCATAATCCCAATCGAGTTTATGCCACTTTGTTTTTGGTTGACGAATATAACTACTTGGTTTCGTGTAGCTAGATCCTTTTGCTATATCAACTGATCTGATGGACATGAACTTGGAGCAAAACTAAAAAGACAAGATGAAATTATGCTTCAAAATTTCTTCGTCCCAGTCTGAATAGGACTCTGAGTATGATGTTTTTTTACTGCGGGAAAGAAAGAAAGAGGGTTGTAGCCAGGTGGAATAATTAAGAAAGGACCACC

mRNA sequence

GATGCCCTCTTCTTTCTCGATGAAACTTCCCTCTTTCTGCAATCTTCTCCAGTCCTACTGTGTTTGGATTTGTACGCTCTCTCCATTTTTGCTTCGACTTCAACTTCATACAAATCCATGTCAATGCCTAATGAGGACAATGCATCTTCACAAACTCAGCTTTCATCTAATTTGTTTGGGGATCTCCTGGATTCCGTGATTGTTGATATTGCATCGGAATGCCATCGAATAGCAAGGTTAGGTCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCAGCACAAGCACGAGTAAGAGTAGCAGATTCTAGCAATAGTAGTGAGGCAAACGGCAAATATGTAGTTGATATTTTTGGACAAACTCATCCATCTGTTGCCAACGAGATATTTGATTGCATGAATTGTGGTCGATCAATTATGGCTGGGAGATTTGCCCCTCATTTAGAGAAATGCATGGGAAGGGGTAGAAAGGCTCGTCCCAAAGTAACAAGAAGTAGTACAGCGGCTCAGAGCCGGTATTCACGAGGCAATCCTGTTTCTGCATATTCCCCTTACCCCAATTCCACCAGCACGAATCGCTTACCTAATGGAACATCTAGTCTTGCAGGGGAGGAGTACTCAAATGGTACATCTGAAGACCCATGAACAGTGGAGCAATGGTTGAATGATTCCAATTTGAGAAAACATACTGTAATCTTAATATGCGCACAGGAATATAATGATATCTCCTGTCATGTTCAGTTTTTACATTACATGACTTCTTTGTATGAGTTATCATTACGTGGGAAAAAAATATATCATGTCTGGAATCTATACTATGAGTTCATTAATTTGAACTGTTCCAAATTTTGATGATGAAGATCTTGTACAGAAGTTCGAGGAAATGGAAGTTAAATGCAATTCTAATTTGGTGTCTTCAATTTCCATTATAAAATTGAGTGCAATTGGCCAATCAGGATGTTTTTTCGATGTGGGGTTCTATTTTTGTGGTTACCTAGTTAGAACATACATATTTTTTCCAAGTTCCAAATCTTGTAAAAATTGAGTAGTGGTTGAGGATGCTATCTCCTATTGTTTCAAACATTTCAATTTGCTTCCATAAAGCTTTAGTCCTTTTCATATTAGATCCTCTGAAAGGGGCCACAAAGATTTTAAAGGCAGTTAAACTCTTGCTTTGTTCATTTTCTGACAGTTCCTAAGATATTCAGCTCTTTTGCTAGAAATTCTATCAACAATTTTATGGAAGCAAATTGCAGGAAGGTGGTCCAAAAGGTTGCCAATCTATGCTCAGCCACTGGAAAACTAGAATGTTAGTTAAGTCTGCATCAGTGGTCTCCACGCTCCACTTTCATTTGCTCAAACATTTCAAGTATGATTGCAGGGACCATAGGGCAGTGCTTGGAAGCTTATGAGACCTGAATGGCTGATTTCTTCTATGAGCATATTGAACAAGAATTGTGCTCAGATACGTCTCTCTCACACAAACCCTTCTTTTTTCTGCCATATAATTGCTTTGAATTTCCGACTGCAATACTTCTCAATTCTTAGGTTAATATGAAAAGAAGTGTTAGATAATAGCTTCTTGAATTTGGCCATTAGTTTTTTAACCTTCTCGTGCACTTGTATATGAAAGCAAGTGAGGCTAGAGCCAATATTGCAAAAATTATTGAATGTTTTTGTTTCTAGTAAAATGTGGTTATTACTTTTATACTTTTTAGATAGAGGAATATATTGTAAAATATTTTTGGTTATGCTTCCAACTGTCATGAAGGTGGCGACTCTACTAAATAACCTTTTTCCAAAACAGGATCTCAAATAATGATTAATTTCTTTAATTCTTATAAACCACAAACATACCACTAATGAAGTGCAGGTGCTCCACTCAGCTATAATAAAGTAGTTTCTTTATAAGATTTGGAGAAAAAATACGCCCTACCTCTCTGTCCTCTCTCTCAAGCAGGAATAAACACATCATCAAACACCGAAGATCATATCTATCTAAATATAAATGATTAATTAATTGGGGAGCAGTTTTTCTCCGGCCTTGAAAGCTCATGCTAGATCCTTTTGCTATATCAACTGATCTGATGGACATGAACTTGGAGCAAAACTAAAAAGACAAGATGAAATTATGCTTCAAAATTTCTTCGTCCCAGTCTGAATAGGACTCTGAGTATGATGTTTTTTTACTGCGGGAAAGAAAGAAAGAGGGTTGTAGCCAGGTGGAATAATTAAGAAAGGACCACC

Coding sequence (CDS)

ATGTCAATGCCTAATGAGGACAATGCATCTTCACAAACTCAGCTTTCATCTAATTTGTTTGGGGATCTCCTGGATTCCGTGATTGTTGATATTGCATCGGAATGCCATCGAATAGCAAGGTTAGGTCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCAGCACAAGCACGAGTAAGAGTAGCAGATTCTAGCAATAGTAGTGAGGCAAACGGCAAATATGTAGTTGATATTTTTGGACAAACTCATCCATCTGTTGCCAACGAGATATTTGATTGCATGAATTGTGGTCGATCAATTATGGCTGGGAGATTTGCCCCTCATTTAGAGAAATGCATGGGAAGGGGTAGAAAGGCTCGTCCCAAAGTAACAAGAAGTAGTACAGCGGCTCAGAGCCGGTATTCACGAGGCAATCCTGTTTCTGCATATTCCCCTTACCCCAATTCCACCAGCACGAATCGCTTACCTAATGGAACATCTAGTCTTGCAGGGGAGGAGTACTCAAATGGTACATCTGAAGACCCATGA

Protein sequence

MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP*

Homology

[Close]

BLAST of CsGy1G023610 vs. ExPASy Swiss-Prot
Match: Q94BV2 (SAGA-associated factor 11 OS=Arabidopsis thaliana OX=3702 GN=SGF11 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 6.4e-59
Identity = 115/169 (68.05%), Postives = 139/169 (82.25%), Query Frame = 0


Query: 6   EDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQARVRVA 65
           EDN SS  QLSS +F DL+DSVI D+ASECHR+ARLGLDR+L+  EEELRLS +AR ++A
Sbjct: 5   EDNKSSHAQLSSQIFLDLVDSVIADVASECHRVARLGLDRDLDIVEEELRLSVEARAKIA 64

Query: 66  DSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGRKARPK 125
           D SN+ E N KYVVDIFGQTHP VA+E+F+CMNCGR I+AGRFAPHLEKCMG+GRKAR K
Sbjct: 65  DPSNNLETNTKYVVDIFGQTHPPVASEVFNCMNCGRQIVAGRFAPHLEKCMGKGRKARAK 124

Query: 126 VTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGT 175
            TRS+TAAQ+R +R +P   YSPYPNS S N+L +G+  +AGE+ SN T
Sbjct: 125 TTRSTTAAQNRNARRSPNPRYSPYPNSASENQLASGSPGVAGEDCSNFT 173

[Close]

BLAST of CsGy1G023610 vs. ExPASy Swiss-Prot
Match: A1L209 (Ataxin-7-like protein 3 OS=Danio rerio OX=7955 GN=atxn7l3 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-08
Identity = 48/144 (33.33%), Postives = 67/144 (46.53%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60
           MS+   DN   +  L+ +++ DL++   + +  E HR  + G    L+E ++E       
Sbjct: 6   MSLSGLDNTKLEA-LAHDVYSDLVEDACLGLCFEVHRAVKQGY-FFLDETDQE------- 65

Query: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
                 S    E   +  VDIFGQ +    N+   C NC RSI A RFAPHLEKC+G GR
Sbjct: 66  ------SMKDFEIVDQPGVDIFGQVYNQWKNKECVCPNCSRSIAASRFAPHLEKCLGMGR 125

Query: 121 KARPKVTRSSTAAQSRYSRGNPVS 145
                   SS  A  R +  N  S
Sbjct: 126 -------NSSRIANRRIASSNNTS 127

[Close]

BLAST of CsGy1G023610 vs. ExPASy Swiss-Prot
Match: B3NHQ1 (SAGA-associated factor 11 homolog OS=Drosophila erecta OX=7220 GN=Sgf11 PE=3 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-06
Identity = 45/135 (33.33%), Postives = 63/135 (46.67%), Query Frame = 0


Query: 14  QLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEA 73
           + S+ LF  LLD  +V I +E H + + G    L+   E+      +  R+ +  N    
Sbjct: 42  EASNYLFQTLLDDAVVGIFNETHHLRKSGNLAALDGVPED------STYRMCEMPN---- 101

Query: 74  NGKYVVDIFGQTHPSVANEIFDCM--NCGRSIMAGRFAPHLEKCMGRGR-----KARPKV 133
                +DIFG    S A +  DC   NC R + A RFAPHLEKCMG GR      +R   
Sbjct: 102 -----LDIFG---ISTAKKPMDCTCPNCDRLVAAARFAPHLEKCMGMGRISSRIASRRLA 158

Query: 134 TRSSTAAQSRYSRGN 142
           T+    +   +S GN
Sbjct: 162 TKEGATSAHLHSAGN 158

[Close]

BLAST of CsGy1G023610 vs. ExPASy Swiss-Prot
Match: B4LDA6 (SAGA-associated factor 11 homolog OS=Drosophila virilis OX=7244 GN=Sgf11 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-06
Identity = 46/140 (32.86%), Postives = 64/140 (45.71%), Query Frame = 0


Query: 19  LFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYV 78
           LF  LLD V+  I  E H + + G    L+   EE   +A++  R+ +  N         
Sbjct: 32  LFQGLLDDVVAGIFIEIHHLRKTGNLTALDGVGEE---NAESAYRICEMPN--------- 91

Query: 79  VDIFGQTHPSVANEIFDCM--NCGRSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSR 138
           +DIFG    S A +  DC   NC R + A RFAPHLEKCMG GR +    +R     +  
Sbjct: 92  LDIFG---ISTAKKPMDCTCPNCDRLVAATRFAPHLEKCMGMGRISSRIASRRLATKEGS 151

Query: 139 YSRGNPVSAYSPYPNSTSTN 157
            +     S Y    N+  T+
Sbjct: 152 SASSTSTSTYLQSGNTGGTD 156

[Close]

BLAST of CsGy1G023610 vs. ExPASy Swiss-Prot
Match: B4PJ01 (SAGA-associated factor 11 homolog OS=Drosophila yakuba OX=7245 GN=Sgf11 PE=3 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-06
Identity = 45/135 (33.33%), Postives = 63/135 (46.67%), Query Frame = 0


Query: 14  QLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEA 73
           + S  LF  LLD  +V I +E H + + G    L+   E+      +  R+ +  N    
Sbjct: 42  EASKYLFQTLLDDAVVGIFNETHHLRKSGNLAALDGVPED------STYRMCEMPN---- 101

Query: 74  NGKYVVDIFGQTHPSVANEIFDCM--NCGRSIMAGRFAPHLEKCMGRGR-----KARPKV 133
                +DIFG    S A +  DC   NC R + A RFAPHLEKCMG GR      +R   
Sbjct: 102 -----LDIFG---ISTAKKPMDCTCPNCDRLVAAARFAPHLEKCMGMGRISSRIASRRLA 158

Query: 134 TRSSTAAQSRYSRGN 142
           T+   ++   +S GN
Sbjct: 162 TKEGASSAHLHSAGN 158

[Close]

BLAST of CsGy1G023610 vs. NCBI nr
Match: XP_004153719.1 (SAGA-associated factor 11 [Cucumis sativus] >XP_011658722.1 SAGA-associated factor 11 [Cucumis sativus] >KGN65832.1 hypothetical protein Csa_023220 [Cucumis sativus])

HSP 1 Score: 345 bits (884), Expect = 2.28e-119
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60
           MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA
Sbjct: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60

Query: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178
           KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Sbjct: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178

[Close]

BLAST of CsGy1G023610 vs. NCBI nr
Match: XP_008457340.1 (PREDICTED: ataxin-7-like protein 3 [Cucumis melo] >XP_008457341.1 PREDICTED: ataxin-7-like protein 3 [Cucumis melo])

HSP 1 Score: 344 bits (883), Expect = 3.25e-119
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60
           MSMPNEDNASSQTQLSSNLFGDLLDSVIVD+ASECHRIARLGLDRNLEEEEEELRLSAQA
Sbjct: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQA 60

Query: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178
           KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Sbjct: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178

[Close]

BLAST of CsGy1G023610 vs. NCBI nr
Match: XP_038893583.1 (SAGA-associated factor 11 [Benincasa hispida] >XP_038893584.1 SAGA-associated factor 11 [Benincasa hispida] >XP_038893585.1 SAGA-associated factor 11 [Benincasa hispida])

HSP 1 Score: 335 bits (860), Expect = 1.04e-115
Identity = 175/178 (98.31%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60
           MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA
Sbjct: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60

Query: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178
           KARPKVTRSSTAAQSRYSRGNPVSAYSPY NSTSTNRL NGTSSLAGEEYSNG SEDP
Sbjct: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYSNSTSTNRLLNGTSSLAGEEYSNGISEDP 178

[Close]

BLAST of CsGy1G023610 vs. NCBI nr
Match: XP_022970596.1 (ataxin-7-like protein 3 isoform X2 [Cucurbita maxima] >XP_022970597.1 ataxin-7-like protein 3 isoform X2 [Cucurbita maxima] >XP_022970598.1 ataxin-7-like protein 3 isoform X2 [Cucurbita maxima] >XP_022970599.1 ataxin-7-like protein 3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 324 bits (831), Expect = 2.66e-111
Identity = 169/178 (94.94%), Postives = 172/178 (96.63%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60
           MSMP+ED+ASS TQLS NLFGDLLDSVI D+ASECHRIARLGLDRNLEEEEEELRLSAQA
Sbjct: 1   MSMPHEDSASSHTQLSFNLFGDLLDSVIADVASECHRIARLGLDRNLEEEEEELRLSAQA 60

Query: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           R RVADS NSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  RERVADSCNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178
           KARPKVTRSSTAAQSRYSRGNPVS YSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Sbjct: 121 KARPKVTRSSTAAQSRYSRGNPVS-YSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 177

[Close]

BLAST of CsGy1G023610 vs. NCBI nr
Match: KAA0060025.1 (farnesol kinase [Cucumis melo var. makuwa] >TYJ97282.1 farnesol kinase [Cucumis melo var. makuwa])

HSP 1 Score: 332 bits (852), Expect = 2.79e-110
Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60
           MSMPNEDNASSQTQLSSNLFGDLLDSVIVD+ASECHRIARLGLDRNLEEEEEELRLSAQA
Sbjct: 247 MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQA 306

Query: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 307 RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 366

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN 172
           KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN
Sbjct: 367 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN 418

[Close]

BLAST of CsGy1G023610 vs. ExPASy TrEMBL
Match: A0A0A0LYA8 (SAGA-associated factor 11 OS=Cucumis sativus OX=3659 GN=Csa_1G533390 PE=3 SV=1)

HSP 1 Score: 345 bits (884), Expect = 1.11e-119
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60
           MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA
Sbjct: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60

Query: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178
           KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Sbjct: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178

[Close]

BLAST of CsGy1G023610 vs. ExPASy TrEMBL
Match: A0A1S3C599 (SAGA-associated factor 11 OS=Cucumis melo OX=3656 GN=LOC103497054 PE=3 SV=1)

HSP 1 Score: 344 bits (883), Expect = 1.57e-119
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60
           MSMPNEDNASSQTQLSSNLFGDLLDSVIVD+ASECHRIARLGLDRNLEEEEEELRLSAQA
Sbjct: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQA 60

Query: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178
           KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Sbjct: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178

[Close]

BLAST of CsGy1G023610 vs. ExPASy TrEMBL
Match: A0A6J1I624 (SAGA-associated factor 11 OS=Cucurbita maxima OX=3661 GN=LOC111469536 PE=3 SV=1)

HSP 1 Score: 324 bits (831), Expect = 1.29e-111
Identity = 169/178 (94.94%), Postives = 172/178 (96.63%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60
           MSMP+ED+ASS TQLS NLFGDLLDSVI D+ASECHRIARLGLDRNLEEEEEELRLSAQA
Sbjct: 1   MSMPHEDSASSHTQLSFNLFGDLLDSVIADVASECHRIARLGLDRNLEEEEEELRLSAQA 60

Query: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           R RVADS NSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  RERVADSCNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178
           KARPKVTRSSTAAQSRYSRGNPVS YSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Sbjct: 121 KARPKVTRSSTAAQSRYSRGNPVS-YSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 177

[Close]

BLAST of CsGy1G023610 vs. ExPASy TrEMBL
Match: A0A5D3BBT0 (SAGA-associated factor 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00760 PE=3 SV=1)

HSP 1 Score: 332 bits (852), Expect = 1.35e-110
Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60
           MSMPNEDNASSQTQLSSNLFGDLLDSVIVD+ASECHRIARLGLDRNLEEEEEELRLSAQA
Sbjct: 247 MSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQA 306

Query: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 307 RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 366

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN 172
           KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN
Sbjct: 367 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN 418

[Close]

BLAST of CsGy1G023610 vs. ExPASy TrEMBL
Match: A0A6J1DBL8 (SAGA-associated factor 11 OS=Momordica charantia OX=3673 GN=LOC111018988 PE=3 SV=1)

HSP 1 Score: 312 bits (799), Expect = 1.01e-106
Identity = 160/178 (89.89%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MSMPNEDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQA 60
           MSMPNE++ASS TQLSSN FGDLLDSVIVD+ASECHRIARLGLDRNLEEEEEELRLSAQA
Sbjct: 1   MSMPNEEHASSHTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQA 60

Query: 61  RVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120
           RVRVADSSNSSEANGKY+VDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR
Sbjct: 61  RVRVADSSNSSEANGKYIVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGR 120

Query: 121 KARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP 178
           KAR KVTRSSTAAQ RYSRG+PV AYSPY +S   NRLPNG S +AGEEYSNGTSEDP
Sbjct: 121 KARLKVTRSSTAAQGRYSRGSPVPAYSPYTSSPGANRLPNGMSGVAGEEYSNGTSEDP 178

[Close]

BLAST of CsGy1G023610 vs. TAIR 10
Match: AT5G58575.1 (CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 228.4 bits (581), Expect = 4.5e-60
Identity = 115/169 (68.05%), Postives = 139/169 (82.25%), Query Frame = 0


Query: 6   EDNASSQTQLSSNLFGDLLDSVIVDIASECHRIARLGLDRNLEEEEEELRLSAQARVRVA 65
           EDN SS  QLSS +F DL+DSVI D+ASECHR+ARLGLDR+L+  EEELRLS +AR ++A
Sbjct: 5   EDNKSSHAQLSSQIFLDLVDSVIADVASECHRVARLGLDRDLDIVEEELRLSVEARAKIA 64

Query: 66  DSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAPHLEKCMGRGRKARPK 125
           D SN+ E N KYVVDIFGQTHP VA+E+F+CMNCGR I+AGRFAPHLEKCMG+GRKAR K
Sbjct: 65  DPSNNLETNTKYVVDIFGQTHPPVASEVFNCMNCGRQIVAGRFAPHLEKCMGKGRKARAK 124

Query: 126 VTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGT 175
            TRS+TAAQ+R +R +P   YSPYPNS S N+L +G+  +AGE+ SN T
Sbjct: 125 TTRSTTAAQNRNARRSPNPRYSPYPNSASENQLASGSPGVAGEDCSNFT 173

The following BLAST results are available for this feature:

BLAST of CsGy1G023610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94BV2	6.4e-59	68.05	SAGA-associated factor 11 OS=Arabidopsis thaliana OX=3702 GN=SGF11 PE=1 SV=1	[more]
A1L209	1.8e-08	33.33	Ataxin-7-like protein 3 OS=Danio rerio OX=7955 GN=atxn7l3 PE=2 SV=1	[more]
B3NHQ1	1.3e-06	33.33	SAGA-associated factor 11 homolog OS=Drosophila erecta OX=7220 GN=Sgf11 PE=3 SV=...	[more]
B4LDA6	1.3e-06	32.86	SAGA-associated factor 11 homolog OS=Drosophila virilis OX=7244 GN=Sgf11 PE=3 SV...	[more]
B4PJ01	1.3e-06	33.33	SAGA-associated factor 11 homolog OS=Drosophila yakuba OX=7245 GN=Sgf11 PE=3 SV=...	[more]

BLAST of CsGy1G023610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004153719.1	2.28e-119	100.00	SAGA-associated factor 11 [Cucumis sativus] >XP_011658722.1 SAGA-associated fact...	[more]
XP_008457340.1	3.25e-119	99.44	PREDICTED: ataxin-7-like protein 3 [Cucumis melo] >XP_008457341.1 PREDICTED: ata...	[more]
XP_038893583.1	1.04e-115	98.31	SAGA-associated factor 11 [Benincasa hispida] >XP_038893584.1 SAGA-associated fa...	[more]
XP_022970596.1	2.66e-111	94.94	ataxin-7-like protein 3 isoform X2 [Cucurbita maxima] >XP_022970597.1 ataxin-7-l...	[more]
KAA0060025.1	2.79e-110	99.42	farnesol kinase [Cucumis melo var. makuwa] >TYJ97282.1 farnesol kinase [Cucumis ...	[more]

BLAST of CsGy1G023610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYA8	1.11e-119	100.00	SAGA-associated factor 11 OS=Cucumis sativus OX=3659 GN=Csa_1G533390 PE=3 SV=1	[more]
A0A1S3C599	1.57e-119	99.44	SAGA-associated factor 11 OS=Cucumis melo OX=3656 GN=LOC103497054 PE=3 SV=1	[more]
A0A6J1I624	1.29e-111	94.94	SAGA-associated factor 11 OS=Cucurbita maxima OX=3661 GN=LOC111469536 PE=3 SV=1	[more]
A0A5D3BBT0	1.35e-110	99.42	SAGA-associated factor 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1DBL8	1.01e-106	89.89	SAGA-associated factor 11 OS=Momordica charantia OX=3673 GN=LOC111018988 PE=3 SV...	[more]

BLAST of CsGy1G023610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58575.1	4.5e-60	68.05	CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR01324...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 93..121 e-value: 2.6E-10 score: 41.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..172
None	No IPR available	PANTHER	PTHR47674	SAGA-ASSOCIATED FACTOR 11	coord: 1..176
IPR013246	SAGA complex, Sgf11 subunit	PFAM	PF08209	Sgf11	coord: 91..121 e-value: 6.3E-17 score: 60.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G023610.2	CsGy1G023610.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0035616	histone H2B conserved C-terminal lysine deubiquitination
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0071819	DUBm complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0070461	SAGA-type complex
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding