CsGy1G021800 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G021800
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Dof zinc finger protein
Location	Gy14Chr1: 20533970 .. 20534607 (+)
RNA-Seq Expression	CsGy1G021800
Synteny	CsGy1G021800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAAACCAATAATTCTCTCTGGGTTTTCCTTTTTCTTTTTCTCTTTTCCTCTCTGTTCTGATATATCTCTATTCATCTTTCCCTATAATGATGGGAGAGAGAAAACATGATAAGAATAATGAAGATCAACATGAAGGTGGAATTAAGCTGTTTGGGGCAACAATTATGCTACAAAATAAAAGGCAAATCATCAAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGCCAATAAATCAGATCAACAATCACTAGAGAAAAGGCCTGAGAAGATCATCCCTTGCCCAAGATGCAAAAGTATGGATACAAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCTAGGCATTTCTGTAAGGGCTGCCAGAGGTATTGGACTGCCGGCGGGGCCCTTCGCAACGTTCCCATCGGAGCCGGCCGTCGTAAAACCAAGCCCCCTTGTCGAACCTTTGGTGGGTTGCCGGAGAATTGTGTGTTTGATTCTTCAGGGATTAATGTCACGGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGAAGTGGCATGTCGTCGCTGCCGCCGCCACACAAGGTGGTTTTCGGCAAATTTTACCGGTAAAGAGGCGGAGGGATTGTCCTGATGGTCAAACTTGTTGA

mRNA sequence

CCAAAAACCAATAATTCTCTCTGGGTTTTCCTTTTTCTTTTTCTCTTTTCCTCTCTGTTCTGATATATCTCTATTCATCTTTCCCTATAATGATGGGAGAGAGAAAACATGATAAGAATAATGAAGATCAACATGAAGGTGGAATTAAGCTGTTTGGGGCAACAATTATGCTACAAAATAAAAGGCAAATCATCAAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGCCAATAAATCAGATCAACAATCACTAGAGAAAAGGCCTGAGAAGATCATCCCTTGCCCAAGATGCAAAAGTATGGATACAAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCTAGGCATTTCTGTAAGGGCTGCCAGAGGTATTGGACTGCCGGCGGGGCCCTTCGCAACGTTCCCATCGGAGCCGGCCGTCGTAAAACCAAGCCCCCTTGTCGAACCTTTGGTGGGTTGCCGGAGAATTGTGTGTTTGATTCTTCAGGGATTAATGTCACGGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGAAGTGGCATGTCGTCGCTGCCGCCGCCACACAAGGTGGTTTTCGGCAAATTTTACCGGTAAAGAGGCGGAGGGATTGTCCTGATGGTCAAACTTGTTGA

Coding sequence (CDS)

ATGATGGGAGAGAGAAAACATGATAAGAATAATGAAGATCAACATGAAGGTGGAATTAAGCTGTTTGGGGCAACAATTATGCTACAAAATAAAAGGCAAATCATCAAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGCCAATAAATCAGATCAACAATCACTAGAGAAAAGGCCTGAGAAGATCATCCCTTGCCCAAGATGCAAAAGTATGGATACAAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCTAGGCATTTCTGTAAGGGCTGCCAGAGGTATTGGACTGCCGGCGGGGCCCTTCGCAACGTTCCCATCGGAGCCGGCCGTCGTAAAACCAAGCCCCCTTGTCGAACCTTTGGTGGGTTGCCGGAGAATTGTGTGTTTGATTCTTCAGGGATTAATGTCACGGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGAAGTGGCATGTCGTCGCTGCCGCCGCCACACAAGGTGGTTTTCGGCAAATTTTACCGGTAAAGAGGCGGAGGGATTGTCCTGATGGTCAAACTTGTTGA

Protein sequence

MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQTC*

Homology

[Close]

BLAST of CsGy1G021800 vs. ExPASy Swiss-Prot
Match: P68350 (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.8e-45
Identity = 101/179 (56.42%), Postives = 119/179 (66.48%), Query Frame = 0


Query: 14  QHEGGIKLFGATIMLQ-NKRQIIKEEEEEEEEEE--------ANKSDQQSLEKRPEKIIP 73
           Q   GIKLFG TI    N  Q IK+EE++++++          + S   + EKRP+KIIP
Sbjct: 4   QDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIP 63

Query: 74  CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFGG 133
           CPRCKSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRK+KPP R  GG
Sbjct: 64  CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV-GG 123

Query: 134 LPENCVFDSSGINVTVQPFELEG-MVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQTC 183
             E            V   EL+  +VE+W   AA A+ GGFR   PVKR R   DGQ+C
Sbjct: 124 FAELL----GAATGAVDQVELDALLVEEWR--AATASHGGFRHDFPVKRLRCYTDGQSC 175

[Close]

BLAST of CsGy1G021800 vs. ExPASy Swiss-Prot
Match: O22967 (Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 7.7e-44
Identity = 100/176 (56.82%), Postives = 116/176 (65.91%), Query Frame = 0


Query: 14  QHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEA------NKSDQQSLEKRPEKIIPCPR 73
           Q   GIKLFG TI   N R I  EEE    E+EA      + S   + EKRP+KII CPR
Sbjct: 4   QDSQGIKLFGKTIAF-NTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPR 63

Query: 74  CKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFGGLPE 133
           CKSM+TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVP+GAGRRK+KPP R   G+  
Sbjct: 64  CKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGM-- 123

Query: 134 NCVFDSSGINVTVQPFELEG-MVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQTC 183
             + D +G+    Q   + G +VE+W   AAAA  G FR   P+KR R   DGQ+C
Sbjct: 124 --LGDGNGVR---QVELINGLLVEEWQ-HAAAAAHGSFRHDFPMKRLRCYSDGQSC 170

[Close]

BLAST of CsGy1G021800 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 7.0e-29
Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 0


Query: 19  IKLFGATIMLQNKRQIIKEEEEEEEEEE-ANKSDQQSLEKRPEKIIPCPRCKSMDTKFCY 78
           IKLFG  I      ++  EEEE+ + +   ++S++    K+P KI+PCPRC SM+TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 79  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTK 117
           +NNYNVNQPRHFCK CQRYWT+GG +R+VPIGAGRRK K
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

[Close]

BLAST of CsGy1G021800 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 3.9e-27
Identity = 62/119 (52.10%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 4   ERKHDKNNEDQHEG----GIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRP 63
           ++K +K++E Q E        +   T  +  K +  K  +  EE      S +  L K+P
Sbjct: 76  DKKEEKDSECQEESLRNESNDVTTTTSGITEKTETTKAAKTNEESGGTACSQEGKL-KKP 135

Query: 64  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPP 119
           +KI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVP+GAGRRK K P
Sbjct: 136 DKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of CsGy1G021800 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 37  EEEEEEEEEEANKSDQQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRY 96
           E  +  E+ +    D ++L K+P KI+PCPRCKSM+TKFCY+NNYN+NQPRHFCK CQRY
Sbjct: 85  ESSDTPEDNQQTTPDGKTL-KKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRY 144

Query: 97  WTAGGALRNVPIGAGRRKTK 117
           WTAGG +RNVP+GAGRRK K
Sbjct: 145 WTAGGTMRNVPVGAGRRKNK 163

[Close]

BLAST of CsGy1G021800 vs. NCBI nr
Match: XP_011657769.2 (dof zinc finger protein DOF1.5 [Cucumis sativus])

HSP 1 Score: 385 bits (989), Expect = 3.01e-135
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60
           MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE
Sbjct: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120

Query: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 180
           TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ
Sbjct: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 180

Query: 181 TC 182
           TC
Sbjct: 181 TC 182

[Close]

BLAST of CsGy1G021800 vs. NCBI nr
Match: XP_008443229.1 (PREDICTED: dof zinc finger protein DOF1.5 [Cucumis melo] >KAA0057037.1 dof zinc finger protein DOF1.5 [Cucumis melo var. makuwa])

HSP 1 Score: 361 bits (926), Expect = 1.06e-125
Identity = 174/182 (95.60%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60
           MMGERKHDKNNEDQH GGIKLFGATIMLQNKRQIIKEEEEEEE   ANKSDQQ+LEKRPE
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQIIKEEEEEEE---ANKSDQQTLEKRPE 60

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120

Query: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 180
           TFGGLPENCVFDSSGI VTVQPFELEGMVEKWH VAAAATQGGFRQILPVKRRRDC DGQ
Sbjct: 121 TFGGLPENCVFDSSGI-VTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDGQ 178

Query: 181 TC 182
           TC
Sbjct: 181 TC 178

[Close]

BLAST of CsGy1G021800 vs. NCBI nr
Match: XP_038895022.1 (dof zinc finger protein DOF1.5-like [Benincasa hispida])

HSP 1 Score: 334 bits (856), Expect = 4.50e-115
Identity = 161/182 (88.46%), Postives = 168/182 (92.31%), Query Frame = 0


Query: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60
           MMGER      E+ +EGGIKLFG TIMLQN RQIIKEEE+EEEEEE NKSDQQSLEKRPE
Sbjct: 1   MMGER------ENNNEGGIKLFGTTIMLQNNRQIIKEEEDEEEEEEPNKSDQQSLEKRPE 60

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCR
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCR 120

Query: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 180
           TF GLPENCVFDSSG+ V VQPFELEGMVE+WHVVAAAATQGGFRQ+LPVKRRRDC DGQ
Sbjct: 121 TFAGLPENCVFDSSGM-VAVQPFELEGMVEEWHVVAAAATQGGFRQMLPVKRRRDCQDGQ 175

Query: 181 TC 182
           TC
Sbjct: 181 TC 175

[Close]

BLAST of CsGy1G021800 vs. NCBI nr
Match: KAE8653218.1 (hypothetical protein Csa_019835 [Cucumis sativus])

HSP 1 Score: 308 bits (790), Expect = 2.03e-105
Identity = 148/182 (81.32%), Postives = 148/182 (81.32%), Query Frame = 0


Query: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60
           MMGERKHDKNNEDQHE                                  DQQSLEKRPE
Sbjct: 1   MMGERKHDKNNEDQHE----------------------------------DQQSLEKRPE 60

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120

Query: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 180
           TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ
Sbjct: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 148

Query: 181 TC 182
           TC
Sbjct: 181 TC 148

[Close]

BLAST of CsGy1G021800 vs. NCBI nr
Match: XP_023519982.1 (dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294 bits (752), Expect = 2.60e-99
Identity = 150/182 (82.42%), Postives = 156/182 (85.71%), Query Frame = 0


Query: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60
           MM ERK  KN+EDQ EGGIKLFGATIML N R I+KEE         N SDQQS EKRP+
Sbjct: 2   MMAERK--KNDEDQ-EGGIKLFGATIMLHNNR-ILKEE--------PNDSDQQSTEKRPD 61

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPC+
Sbjct: 62  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQ 121

Query: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 180
           TFGGLPENCVFDSSGI V VQPFELEGMVE+WHVVAAAA Q GFRQILPVKRRR   DGQ
Sbjct: 122 TFGGLPENCVFDSSGI-VAVQPFELEGMVEEWHVVAAAA-QDGFRQILPVKRRRGYQDGQ 169

Query: 181 TC 182
            C
Sbjct: 182 IC 169

[Close]

BLAST of CsGy1G021800 vs. ExPASy TrEMBL
Match: A0A0A0LV52 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G475990 PE=4 SV=1)

HSP 1 Score: 377 bits (968), Expect = 2.16e-132
Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60
           MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEE  NKSDQQSLEKRPE
Sbjct: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEE--NKSDQQSLEKRPE 60

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120

Query: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 180
           TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ
Sbjct: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 180

Query: 181 TC 182
           TC
Sbjct: 181 TC 180

[Close]

BLAST of CsGy1G021800 vs. ExPASy TrEMBL
Match: A0A5A7UQX1 (Dof zinc finger protein DOF1.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002240 PE=4 SV=1)

HSP 1 Score: 361 bits (926), Expect = 5.13e-126
Identity = 174/182 (95.60%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60
           MMGERKHDKNNEDQH GGIKLFGATIMLQNKRQIIKEEEEEEE   ANKSDQQ+LEKRPE
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQIIKEEEEEEE---ANKSDQQTLEKRPE 60

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120

Query: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 180
           TFGGLPENCVFDSSGI VTVQPFELEGMVEKWH VAAAATQGGFRQILPVKRRRDC DGQ
Sbjct: 121 TFGGLPENCVFDSSGI-VTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDGQ 178

Query: 181 TC 182
           TC
Sbjct: 181 TC 178

[Close]

BLAST of CsGy1G021800 vs. ExPASy TrEMBL
Match: A0A1S3B895 (dof zinc finger protein DOF1.5 OS=Cucumis melo OX=3656 GN=LOC103486868 PE=4 SV=1)

HSP 1 Score: 361 bits (926), Expect = 5.13e-126
Identity = 174/182 (95.60%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60
           MMGERKHDKNNEDQH GGIKLFGATIMLQNKRQIIKEEEEEEE   ANKSDQQ+LEKRPE
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQIIKEEEEEEE---ANKSDQQTLEKRPE 60

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120

Query: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 180
           TFGGLPENCVFDSSGI VTVQPFELEGMVEKWH VAAAATQGGFRQILPVKRRRDC DGQ
Sbjct: 121 TFGGLPENCVFDSSGI-VTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDGQ 178

Query: 181 TC 182
           TC
Sbjct: 181 TC 178

[Close]

BLAST of CsGy1G021800 vs. ExPASy TrEMBL
Match: A0A6J1EH23 (dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC111434231 PE=4 SV=1)

HSP 1 Score: 292 bits (747), Expect = 7.28e-99
Identity = 149/182 (81.87%), Postives = 156/182 (85.71%), Query Frame = 0


Query: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60
           MM ERK  KN+ED HEGGIKLFGATIML + R I+KEE         N SDQQS EKRP+
Sbjct: 2   MMAERK--KNDED-HEGGIKLFGATIMLHDNR-ILKEE--------PNVSDQQSPEKRPD 61

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPC+
Sbjct: 62  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQ 121

Query: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 180
           TFGGLPENCVFDSSGI V VQPFELEGMVE+WHVVAAAA Q GFRQILPVKRRR   DGQ
Sbjct: 122 TFGGLPENCVFDSSGI-VAVQPFELEGMVEEWHVVAAAA-QDGFRQILPVKRRRGYQDGQ 169

Query: 181 TC 182
            C
Sbjct: 182 IC 169

[Close]

BLAST of CsGy1G021800 vs. ExPASy TrEMBL
Match: A0A6J1KLC9 (cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495221 PE=4 SV=1)

HSP 1 Score: 291 bits (745), Expect = 1.47e-98
Identity = 149/182 (81.87%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60
           MM ERK  KN+EDQ EGGIKLFGATIML N R I+KEE         N SDQQS EKRP+
Sbjct: 2   MMAERK--KNDEDQ-EGGIKLFGATIMLHNNR-ILKEE--------PNDSDQQSPEKRPD 61

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPC+
Sbjct: 62  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQ 121

Query: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQ 180
           TFGGLPENCVFDSSGI V VQPFELEGMVE+WHVVAAAA   GFRQILPVKRRR   DGQ
Sbjct: 122 TFGGLPENCVFDSSGI-VAVQPFELEGMVEEWHVVAAAA-HDGFRQILPVKRRRGYQDGQ 169

Query: 181 TC 182
            C
Sbjct: 182 IC 169

[Close]

BLAST of CsGy1G021800 vs. TAIR 10
Match: AT1G29160.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-46
Identity = 101/179 (56.42%), Postives = 119/179 (66.48%), Query Frame = 0


Query: 14  QHEGGIKLFGATIMLQ-NKRQIIKEEEEEEEEEE--------ANKSDQQSLEKRPEKIIP 73
           Q   GIKLFG TI    N  Q IK+EE++++++          + S   + EKRP+KIIP
Sbjct: 4   QDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIP 63

Query: 74  CPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFGG 133
           CPRCKSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRK+KPP R  GG
Sbjct: 64  CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV-GG 123

Query: 134 LPENCVFDSSGINVTVQPFELEG-MVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQTC 183
             E            V   EL+  +VE+W   AA A+ GGFR   PVKR R   DGQ+C
Sbjct: 124 FAELL----GAATGAVDQVELDALLVEEWR--AATASHGGFRHDFPVKRLRCYTDGQSC 175

[Close]

BLAST of CsGy1G021800 vs. TAIR 10
Match: AT2G34140.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 178.3 bits (451), Expect = 5.5e-45
Identity = 100/176 (56.82%), Postives = 116/176 (65.91%), Query Frame = 0


Query: 14  QHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEA------NKSDQQSLEKRPEKIIPCPR 73
           Q   GIKLFG TI   N R I  EEE    E+EA      + S   + EKRP+KII CPR
Sbjct: 4   QDSQGIKLFGKTIAF-NTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPR 63

Query: 74  CKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFGGLPE 133
           CKSM+TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVP+GAGRRK+KPP R   G+  
Sbjct: 64  CKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGM-- 123

Query: 134 NCVFDSSGINVTVQPFELEG-MVEKWHVVAAAATQGGFRQILPVKRRRDCPDGQTC 183
             + D +G+    Q   + G +VE+W   AAAA  G FR   P+KR R   DGQ+C
Sbjct: 124 --LGDGNGVR---QVELINGLLVEEWQ-HAAAAAHGSFRHDFPMKRLRCYSDGQSC 170

[Close]

BLAST of CsGy1G021800 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 128.6 bits (322), Expect = 5.0e-30
Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 0


Query: 19  IKLFGATIMLQNKRQIIKEEEEEEEEEE-ANKSDQQSLEKRPEKIIPCPRCKSMDTKFCY 78
           IKLFG  I      ++  EEEE+ + +   ++S++    K+P KI+PCPRC SM+TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 79  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTK 117
           +NNYNVNQPRHFCK CQRYWT+GG +R+VPIGAGRRK K
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

[Close]

BLAST of CsGy1G021800 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-28
Identity = 62/119 (52.10%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 4   ERKHDKNNEDQHEG----GIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRP 63
           ++K +K++E Q E        +   T  +  K +  K  +  EE      S +  L K+P
Sbjct: 76  DKKEEKDSECQEESLRNESNDVTTTTSGITEKTETTKAAKTNEESGGTACSQEGKL-KKP 135

Query: 64  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPP 119
           +KI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVP+GAGRRK K P
Sbjct: 136 DKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of CsGy1G021800 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-28
Identity = 62/119 (52.10%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 4   ERKHDKNNEDQHEG----GIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRP 63
           ++K +K++E Q E        +   T  +  K +  K  +  EE      S +  L K+P
Sbjct: 76  DKKEEKDSECQEESLRNESNDVTTTTSGITEKTETTKAAKTNEESGGTACSQEGKL-KKP 135

Query: 64  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPP 119
           +KI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVP+GAGRRK K P
Sbjct: 136 DKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSP 193

The following BLAST results are available for this feature:

BLAST of CsGy1G021800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68350	1.8e-45	56.42	Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV...	[more]
O22967	7.7e-44	56.82	Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1	[more]
Q8W1E3	7.0e-29	59.60	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q93ZL5	3.9e-27	52.10	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8LFV3	1.1e-26	66.25	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]

BLAST of CsGy1G021800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657769.2	3.01e-135	100.00	dof zinc finger protein DOF1.5 [Cucumis sativus]	[more]
XP_008443229.1	1.06e-125	95.60	PREDICTED: dof zinc finger protein DOF1.5 [Cucumis melo] >KAA0057037.1 dof zinc ...	[more]
XP_038895022.1	4.50e-115	88.46	dof zinc finger protein DOF1.5-like [Benincasa hispida]	[more]
KAE8653218.1	2.03e-105	81.32	hypothetical protein Csa_019835 [Cucumis sativus]	[more]
XP_023519982.1	2.60e-99	82.42	dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy1G021800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV52	2.16e-132	98.90	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G475990 PE...	[more]
A0A5A7UQX1	5.13e-126	95.60	Dof zinc finger protein DOF1.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3B895	5.13e-126	95.60	dof zinc finger protein DOF1.5 OS=Cucumis melo OX=3656 GN=LOC103486868 PE=4 SV=1	[more]
A0A6J1EH23	7.28e-99	81.87	dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC11143423...	[more]
A0A6J1KLC9	1.47e-98	81.87	cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495221 PE=4 SV=1	[more]

BLAST of CsGy1G021800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29160.1	1.3e-46	56.42	Dof-type zinc finger DNA-binding family protein	[more]
AT2G34140.1	5.5e-45	56.82	Dof-type zinc finger DNA-binding family protein	[more]
AT5G62430.1	5.0e-30	59.60	cycling DOF factor 1	[more]
AT5G39660.1	2.7e-28	52.10	cycling DOF factor 2	[more]
AT5G39660.2	2.7e-28	52.10	cycling DOF factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 15..175
None	No IPR available	PANTHER	PTHR31089:SF49	DOF ZINC FINGER PROTEIN DOF1.5-LIKE	coord: 15..175
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 61..116 e-value: 6.9E-32 score: 109.4
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 65..101
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 63..117 score: 28.360073

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G021800.1	CsGy1G021800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity