CsGy1G021210 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G021210
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	cold-regulated 413 inner membrane protein 1, chloroplastic-like
Location	Gy14Chr1: 19910117 .. 19913268 (-)
RNA-Seq Expression	CsGy1G021210
Synteny	CsGy1G021210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACCTTATCAGAACTTAAAACAAATTCTCTTATCATTAACAAATGAGGTTTGGGATTAGTTGATTCCATTTGATCTTCATCTCTACTATCTATGTAGACCTCCTTTTCATCAATTACAACTCACTTGATCGGGCTTAAAGGACGCCTTCCATGAATTAATTGTGTTTTTTGATTCGTTATTTCTTGAAGTTTCTTTTTAAAATTTTATTTTTTTGTGATTTATTTTTCATAGTTTAGTAAAAAAAAATGTGGCGGTTTGATGAACACTTTCCTATCGGTTTCGGGGAGGATAGCCGGTTCCGGTTTTGGTTTTGTTGAAGTTCATCAGATGTACAGGCGACAGTTTGCTTGTTGAATCACAACTAGAGAATCAAGGTCACTGTTTCAATTTCATTTCCAAATCCGAGAAAAGATAAAGGCCGAATCAAGCAAAGGAAGAAGAGGGGAAATGGTTTGTGTATCTCTATCTTCTGCTGTTTCACTTTATATTCCTTCTTTCTACAAATCCAAACTCTCCGTTCCTCTCTCCCTAAGATCTTCACCGCCAAATGCAAAGCTCTCGTTAAATTCTGCCGCTAAACAGAGTTCAATCTGTTACAATCCGCTCAGGTAATTTCAATGACAGATTGATTGAGTAGTAGTGGTTTTGGTTTTAAAAATTTGAGAGTTTTGAAAAGAAAAGTTGTTTGATCAGGTTTGCTGTCGGTAGCGAGGGTATTAACAAGAAGAAGAGTCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTGTTAACACTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTGTAATTCTCTCTTCTTTCTATCTGAGTATTGTATAATTGGATATAAGCACCATCTCGTCTAATATATGATATTGTATTTTATGTGGAACTGTGCTTTTATTTATCGTTAGTAATTTGTGATACGTTTCTGTAGCATCAGCACAGAATGGTCAATTTTAACCAATACTCAGATGGGGTTCAAATGCTTTGCCACAATTCTTTTGATTCCGGTGGTTATTTAGTTTCGTTTAAGTCGGTAGCATTCAGTGGTTATATTTATACAGTCAACATGCCACCAGTTTCACCTTTATCTGCTGTTTCAGAGTCCATTCCACCTCCACGTATCAAAGTATAACTTTTAAAACCCTAGGTTTCTTCTTCAGGGTTTTAATGCTCGCAAAGGGAACTGGGATTCAGAAGTCATTTATCGTTCCGCTATTTGCACTTCAGGCGCCTGCAAGTGTTATCTCCTGGATTAAGTAAGCCTCGTGTAAAATCTCTATCAGTATATATCAACAGGATGCCAAGATCTATGAGTAATCAGTTCCACTTTCTAAATGGCTCAATTTTTTGGTTCTATCTTCTATATCAGAGGAGAGTACGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTATTCTATTCTGTCTTCTGATTTTCTTTACTTAGCTAATGAATTTAGTGCACTGTTTAGCATTCACTGTATTCGGGAGGAACTTAGTTCATAGCTTGGCTAGAAACGTGTTAGTTTGAGCCTCACTTAGTTCAATTAACTGAAAGGGTTCACTTCGTACAATCTCTTGAATGAATAGAAAATTCATAGGAAATCGAATGCTGGGTTCTTTTGGATGTAGGTGAATTGGAGATACCATTCATATCACTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGTAAACAACCTTTTAATCATATTTCACTTTATAATTTTTCCAATCTTAGCATTTGATCATGTTAGAATTAGCGGGCTTGTTGTATGTTGAAAGTCCCAGAGTTTGTTAAGATTTTATAGTGCCCTAATTATCTTTTATTATTTTTATTATGGGTTCTATAACCTATAAATAAATGCTCCCTATATCATTATGAGATAGAGAAAAATAATAAAAAAATAACATCGTGGTTTTTCTCCTAAAATGGTTTATCTTTCTATTTTTCTTCATTCAATAGATCATTATCTGTCATTTGCAGGGGAACTCAAGAAGGGTGCATTATCTCCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTCGTTTGTATTACCGCTGTTTCATTCCTGTTCGTGATCTGAGTTCCTTAGTCACTCCCAAGTAAACCTTATGGGTTAAATCTTCAATAAACACTATTGTTCGTCCTGTAATAGTTACACAATAGTTAGAATGTACAGACCTTCCTTTTCATGTTTATAAATACTATAAAGAAATGTTTATTTCTTTTTGCTTGTTTAATCTAATCATCATCCTGTGTCTGTTTTTAGTTATCACGAAATTGCATCGGATTGAACCTGAACAATTACTTGTTTCCCTTTCAAATAACATCAGCACTAACTAGTTATATATGGCAGTTTGTGAACTTGCTTTCTATCATCTGCGGTTTATTGAATAATTTGTACATTGTACAGCGAACAATCTTAAATTGGACAAAGTTGTCATTAATAGATAAAACTAAATGAACTCGTGCAAGCTGAAGCTCGAGTACAATGCCTCTTCCCTGGAAAACCAACCTAAAGAGCTTCCAAATGGAATTGACTTATCTATATTATTTGCTAACATTCATCCAAATTGGAGTTGACCTGTCTATATCTTTTTATTGGGTAACAATGTGAAATATCTTATGAATAGCATATGACCTATTTATTTCTTTAATCTACTGATGTATGTTCCTGTGGACTTCTTAGTTATCTAATGCATAACCTGATGTATAACAGCAATAACTTACTATATAATCTTTCTTTTACCATATTGATGTCTAACAATGCAAAAATGTGCAGCAAATAAGCGATTGCCATCTCTCTGTGGAGAAAAGAAACAATTTCTTCGGCTTACAGATGATTTGCCACGAGCAAACCCATAAGGTAAGTTATGATCCAAAGCAGCACCAATCGTTTTGATATCGAAGTGGCTGAGCTGGGCATGCCTGATGGTTCTGCACCATAAATTGATGGATCTGTGGGCGTATATGTTGGGTTTGTAGGTGTATATGTAGGGTTCGTGGTGGCTGGCGGTGGCGGTGTTTCAACTGTGG

mRNA sequence

TAACCTTATCAGAACTTAAAACAAATTCTCTTATCATTAACAAATGAGGTTTGGGATTAGTTGATTCCATTTGATCTTCATCTCTACTATCTATGTAGACCTCCTTTTCATCAATTACAACTCACTTGATCGGGCTTAAAGGACGCCTTCCATGAATTAATTGTGTTTTTTGATTCGTTATTTCTTGAAGTTTCTTTTTAAAATTTTATTTTTTTGTGATTTATTTTTCATAGTTTAGTAAAAAAAAATGTGGCGGTTTGATGAACACTTTCCTATCGGTTTCGGGGAGGATAGCCGGTTCCGGTTTTGGTTTTGTTGAAGTTCATCAGATGTACAGGCGACAGTTTGCTTGTTGAATCACAACTAGAGAATCAAGGTCACTGTTTCAATTTCATTTCCAAATCCGAGAAAAGATAAAGGCCGAATCAAGCAAAGGAAGAAGAGGGGAAATGGTTTGTGTATCTCTATCTTCTGCTGTTTCACTTTATATTCCTTCTTTCTACAAATCCAAACTCTCCGTTCCTCTCTCCCTAAGATCTTCACCGCCAAATGCAAAGCTCTCGTTAAATTCTGCCGCTAAACAGAGTTCAATCTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGTATTAACAAGAAGAAGAGTCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTGTTAACACTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTGGTTTTAATGCTCGCAAAGGGAACTGGGATTCAGAAGTCATTTATCGTTCCGCTATTTGCACTTCAGGCGCCTGCAAGTGTTATCTCCTGGATTAAAGGAGAGTACGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTGAATTGGAGATACCATTCATATCACTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGTGCATTATCTCCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTCGTTTGTATTACCGCTGTTTCATTCCTGTTCGTGATCTGAGTTCCTTAGTCACTCCCAACAAATAAGCGATTGCCATCTCTCTGTGGAGAAAAGAAACAATTTCTTCGGCTTACAGATGATTTGCCACGAGCAAACCCATAAGGTAAGTTATGATCCAAAGCAGCACCAATCGTTTTGATATCGAAGTGGCTGAGCTGGGCATGCCTGATGGTTCTGCACCATAAATTGATGGATCTGTGGGCGTATATGTTGGGTTTGTAGGTGTATATGTAGGGTTCGTGGTGGCTGGCGGTGGCGGTGTTTCAACTGTGG

Coding sequence (CDS)

ATGGTTTGTGTATCTCTATCTTCTGCTGTTTCACTTTATATTCCTTCTTTCTACAAATCCAAACTCTCCGTTCCTCTCTCCCTAAGATCTTCACCGCCAAATGCAAAGCTCTCGTTAAATTCTGCCGCTAAACAGAGTTCAATCTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGTATTAACAAGAAGAAGAGTCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTGTTAACACTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTGGTTTTAATGCTCGCAAAGGGAACTGGGATTCAGAAGTCATTTATCGTTCCGCTATTTGCACTTCAGGCGCCTGCAAGTGTTATCTCCTGGATTAAAGGAGAGTACGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTGAATTGGAGATACCATTCATATCACTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGTGCATTATCTCCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTCGTTTGTATTACCGCTGTTTCATTCCTGTTCGTGATCTGA

Protein sequence

MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI*

Homology

[Close]

BLAST of CsGy1G021210 vs. ExPASy Swiss-Prot
Match: F4I1G5 (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM2 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.2e-60
Identity = 131/231 (56.71%), Postives = 162/231 (70.13%), Query Frame = 0


Query: 2   VCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRF------ 61
           +C+S S  VSL     +  K  + L LR  P N           S +C+NPLR       
Sbjct: 4   LCLSSSRIVSL-----HHQKPFLALKLRPRPSNIS---GLGHSTSVVCFNPLRLSADRQR 63

Query: 62  -AVGSEGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFA 121
            A  S    K++ RG S VCYA P ++   LQWISTIS V LM A+GTGI KSF+VPLFA
Sbjct: 64  TATVSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFA 123

Query: 122 LQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQ 181
           LQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG Q
Sbjct: 124 LQAPMGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQ 183

Query: 182 EGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 225
           EG I+SL I+ +LAFQHFSRAG+ Q+AFDQNS++ATVA++ +T VSFLF+I
Sbjct: 184 EGAILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226

[Close]

BLAST of CsGy1G021210 vs. ExPASy Swiss-Prot
Match: Q94AL8 (Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM1 PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.1e-59
Identity = 123/231 (53.25%), Postives = 168/231 (72.73%), Query Frame = 0


Query: 2   VCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSS-ICYNPLRF----- 61
           +C+S S  VSL     +  K  + L LRS P +    L+   + +S +C+NPLR      
Sbjct: 4   LCLSSSRIVSL-----HHQKPFLSLKLRSRPSD----LSGLGRHTSPVCFNPLRLSGDRQ 63

Query: 62  --AVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFA 121
             A  S  + K++ RG S VCYA P++  +LQWISTIS + LMLA+GTGI KS +VPLFA
Sbjct: 64  RTATVSTRVEKRRKRGSSVVCYAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFA 123

Query: 122 LQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQ 181
           L AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG Q
Sbjct: 124 LHAPSSIVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQ 183

Query: 182 EGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 225
           EG II++ I+ +LAFQHFSRAGS ++A+++ S++ATVA++ +T VS L ++
Sbjct: 184 EGAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225

[Close]

BLAST of CsGy1G021210 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 6.6e-13
Identity = 47/143 (32.87%), Postives = 79/143 (55.24%), Query Frame = 0


Query: 81  TRTLQWISTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLA 140
           T  LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A
Sbjct: 47  TSVLQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIA 106

Query: 141 LLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGCIISLLIAAYLAFQHFSR 200
           ++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G +I L+IA YL  +H   
Sbjct: 107 IIVRLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKA 166

Query: 201 AGSFQRAFDQ-NSIVATVAVVCI 216
           +G F+ +F Q N I  T+ +V +
Sbjct: 167 SGGFKNSFTQKNGISNTIGIVAL 189

[Close]

BLAST of CsGy1G021210 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 40/127 (31.50%), Postives = 76/127 (59.84%), Query Frame = 0


Query: 84  LQWISTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLV 143
           L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++
Sbjct: 51  LKFLASFAAIYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVL 110

Query: 144 RLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGS 203
           RLFF    P  LE+P   +LL++V+P +   ++RGT  G +ISL I  YL  +H   +G 
Sbjct: 111 RLFFPKHFPDWLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGG 170

[Close]

BLAST of CsGy1G021210 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 45/143 (31.47%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 81  TRTLQWISTISSVVLMLAK----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLA 140
           T  L+W+++I+++ L++       T +  S ++P      P+ +    +GE G W AF+A
Sbjct: 45  TSVLEWVASIAAIYLLVLDRTNWKTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVA 104

Query: 141 LLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGCIISLLIAAYLAFQHFSR 200
           ++V+LFF       LE+P   +LL +VAP  +    R +  G  I L I  YL  +H   
Sbjct: 105 VVVQLFFPKHAREYLELPVALVLLAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRA 164

Query: 201 AGSFQRAFDQ-NSIVATVAVVCI 216
           +G F+ AF + N I  TV ++C+
Sbjct: 165 SGGFRNAFTKANGISNTVGIICL 187

[Close]

BLAST of CsGy1G021210 vs. NCBI nr
Match: XP_004147401.1 (cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus] >KGN65572.1 hypothetical protein Csa_019760 [Cucumis sativus])

HSP 1 Score: 417 bits (1073), Expect = 1.16e-146
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASV 120
           GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASV
Sbjct: 61  GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASV 120

Query: 121 ISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISL 180
           ISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISL
Sbjct: 121 ISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISL 180

Query: 181 LIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224
           LIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI
Sbjct: 181 LIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224

[Close]

BLAST of CsGy1G021210 vs. NCBI nr
Match: XP_008443932.1 (PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo] >KAA0057095.1 cold-regulated 413 inner membrane protein 2 [Cucumis melo var. makuwa] >TYK20630.1 cold-regulated 413 inner membrane protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 405 bits (1041), Expect = 1.05e-141
Identity = 219/229 (95.63%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY PSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQ 120
           GI     NKKK+RGLSA CYAMPVNTRTLQW+STISSVVLMLAKGTGIQKSFIVPLFALQ
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224
           CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAV+CITAVSFLFVI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

[Close]

BLAST of CsGy1G021210 vs. NCBI nr
Match: XP_038896035.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 376 bits (966), Expect = 2.82e-130
Identity = 204/229 (89.08%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY PS Y+SKLSVPLSLRSSPPNAKLS + AAKQSSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSE 60

Query: 61  GI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQ 120
           GI      KK+SRGLSA+CYAMPVN RTLQWISTISS VLMLAKGTGIQKSFIVPLFAL 
Sbjct: 61  GIATAAITKKRSRGLSAICYAMPVNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFALL 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASV+SWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG
Sbjct: 121 APASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQEG 180

Query: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224
            IISL+IAAYLAFQHFSRAGSF+RAFDQNSIVATVAV+C TAVSFL VI
Sbjct: 181 NIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 229

[Close]

BLAST of CsGy1G021210 vs. NCBI nr
Match: XP_022994881.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 352 bits (904), Expect = 7.57e-121
Identity = 192/229 (83.84%), Postives = 207/229 (90.39%), Query Frame = 0


Query: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60
           MVCV LSSA+SL+ P  +KSKLS PLSLRSS PNAKL+ N AAKQSSIC NP+RF  GS+
Sbjct: 1   MVCV-LSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSD 60

Query: 61  -----GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQ 120
                 INKK+ RGLSAVCYAMP++ R LQWISTISSV+LMLA+GTGIQKSFIVPLFALQ
Sbjct: 61  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224
            IISLLIAAYLAFQHFSRAGSF+RAFDQNSIVATVA++C+TAVSFL VI
Sbjct: 181 TIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

[Close]

BLAST of CsGy1G021210 vs. NCBI nr
Match: XP_022140053.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 352 bits (902), Expect = 1.58e-120
Identity = 190/229 (82.97%), Postives = 206/229 (89.96%), Query Frame = 0


Query: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60
           MVC+SLSSA SL+  S YK+KLS PLSLRS P +AKLSLN A K+SSICYNPLRFAVG+E
Sbjct: 1   MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNE 60

Query: 61  GI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQ 120
           GI     NK++SRGL+ VCYAMP+  R +QWISTIS VVLMLA+GTGIQKSFIVPLFALQ
Sbjct: 61  GIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISYVVLMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224
            IISLLIAA+LAFQHFSRAGSF+RAFDQNSIVAT AVVC+TA SFL VI
Sbjct: 181 SIISLLIAAFLAFQHFSRAGSFRRAFDQNSIVATAAVVCVTAASFLLVI 229

[Close]

BLAST of CsGy1G021210 vs. ExPASy TrEMBL
Match: A0A0A0LXM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G459500 PE=3 SV=1)

HSP 1 Score: 417 bits (1073), Expect = 5.64e-147
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASV 120
           GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASV
Sbjct: 61  GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASV 120

Query: 121 ISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISL 180
           ISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISL
Sbjct: 121 ISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISL 180

Query: 181 LIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224
           LIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI
Sbjct: 181 LIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224

[Close]

BLAST of CsGy1G021210 vs. ExPASy TrEMBL
Match: A0A5D3DB21 (Cold-regulated 413 inner membrane protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00120 PE=3 SV=1)

HSP 1 Score: 405 bits (1041), Expect = 5.09e-142
Identity = 219/229 (95.63%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY PSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQ 120
           GI     NKKK+RGLSA CYAMPVNTRTLQW+STISSVVLMLAKGTGIQKSFIVPLFALQ
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224
           CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAV+CITAVSFLFVI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

[Close]

BLAST of CsGy1G021210 vs. ExPASy TrEMBL
Match: A0A1S3B961 (cold-regulated 413 inner membrane protein 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487404 PE=3 SV=1)

HSP 1 Score: 405 bits (1041), Expect = 5.09e-142
Identity = 219/229 (95.63%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY PSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQ 120
           GI     NKKK+RGLSA CYAMPVNTRTLQW+STISSVVLMLAKGTGIQKSFIVPLFALQ
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224
           CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAV+CITAVSFLFVI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

[Close]

BLAST of CsGy1G021210 vs. ExPASy TrEMBL
Match: A0A6J1K0I6 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490472 PE=3 SV=1)

HSP 1 Score: 352 bits (904), Expect = 3.66e-121
Identity = 192/229 (83.84%), Postives = 207/229 (90.39%), Query Frame = 0


Query: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60
           MVCV LSSA+SL+ P  +KSKLS PLSLRSS PNAKL+ N AAKQSSIC NP+RF  GS+
Sbjct: 1   MVCV-LSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSD 60

Query: 61  -----GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQ 120
                 INKK+ RGLSAVCYAMP++ R LQWISTISSV+LMLA+GTGIQKSFIVPLFALQ
Sbjct: 61  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224
            IISLLIAAYLAFQHFSRAGSF+RAFDQNSIVATVA++C+TAVSFL VI
Sbjct: 181 TIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

[Close]

BLAST of CsGy1G021210 vs. ExPASy TrEMBL
Match: A0A6J1CH44 (cold-regulated 413 inner membrane protein 1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111010803 PE=3 SV=1)

HSP 1 Score: 352 bits (902), Expect = 7.65e-121
Identity = 190/229 (82.97%), Postives = 206/229 (89.96%), Query Frame = 0


Query: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60
           MVC+SLSSA SL+  S YK+KLS PLSLRS P +AKLSLN A K+SSICYNPLRFAVG+E
Sbjct: 1   MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNE 60

Query: 61  GI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQ 120
           GI     NK++SRGL+ VCYAMP+  R +QWISTIS VVLMLA+GTGIQKSFIVPLFALQ
Sbjct: 61  GIATAAINKRRSRGLTTVCYAMPLTARNIQWISTISYVVLMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWTAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224
            IISLLIAA+LAFQHFSRAGSF+RAFDQNSIVAT AVVC+TA SFL VI
Sbjct: 181 SIISLLIAAFLAFQHFSRAGSFRRAFDQNSIVATAAVVCVTAASFLLVI 229

[Close]

BLAST of CsGy1G021210 vs. TAIR 10
Match: AT1G29390.1 (cold regulated 314 thylakoid membrane 2 )

HSP 1 Score: 232.6 bits (592), Expect = 3.0e-61
Identity = 131/231 (56.71%), Postives = 162/231 (70.13%), Query Frame = 0


Query: 2   VCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRF------ 61
           +C+S S  VSL     +  K  + L LR  P N           S +C+NPLR       
Sbjct: 4   LCLSSSRIVSL-----HHQKPFLALKLRPRPSNIS---GLGHSTSVVCFNPLRLSADRQR 63

Query: 62  -AVGSEGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFA 121
            A  S    K++ RG S VCYA P ++   LQWISTIS V LM A+GTGI KSF+VPLFA
Sbjct: 64  TATVSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFA 123

Query: 122 LQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQ 181
           LQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG Q
Sbjct: 124 LQAPMGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQ 183

Query: 182 EGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 225
           EG I+SL I+ +LAFQHFSRAG+ Q+AFDQNS++ATVA++ +T VSFLF+I
Sbjct: 184 EGAILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226

[Close]

BLAST of CsGy1G021210 vs. TAIR 10
Match: AT1G29395.1 (COLD REGULATED 314 INNER MEMBRANE 1 )

HSP 1 Score: 230.3 bits (586), Expect = 1.5e-60
Identity = 123/231 (53.25%), Postives = 168/231 (72.73%), Query Frame = 0


Query: 2   VCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSS-ICYNPLRF----- 61
           +C+S S  VSL     +  K  + L LRS P +    L+   + +S +C+NPLR      
Sbjct: 4   LCLSSSRIVSL-----HHQKPFLSLKLRSRPSD----LSGLGRHTSPVCFNPLRLSGDRQ 63

Query: 62  --AVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFA 121
             A  S  + K++ RG S VCYA P++  +LQWISTIS + LMLA+GTGI KS +VPLFA
Sbjct: 64  RTATVSTRVEKRRKRGSSVVCYAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFA 123

Query: 122 LQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQ 181
           L AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG Q
Sbjct: 124 LHAPSSIVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQ 183

Query: 182 EGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 225
           EG II++ I+ +LAFQHFSRAGS ++A+++ S++ATVA++ +T VS L ++
Sbjct: 184 EGAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225

[Close]

BLAST of CsGy1G021210 vs. TAIR 10
Match: AT1G29390.2 (cold regulated 314 thylakoid membrane 2 )

HSP 1 Score: 224.6 bits (571), Expect = 8.2e-59
Identity = 114/172 (66.28%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 54  RFAVGSEGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLF 113
           R A  S    K++ RG S VCYA P ++   LQWISTIS V LM A+GTGI KSF+VPLF
Sbjct: 12  RTATVSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLF 71

Query: 114 ALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGT 173
           ALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG 
Sbjct: 72  ALQAPMGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGK 131

Query: 174 QEGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 225
           QEG I+SL I+ +LAFQHFSRAG+ Q+AFDQNS++ATVA++ +T VSFLF+I
Sbjct: 132 QEGAILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 183

[Close]

BLAST of CsGy1G021210 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 75.9 bits (185), Expect = 4.7e-14
Identity = 47/143 (32.87%), Postives = 79/143 (55.24%), Query Frame = 0


Query: 81  TRTLQWISTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLA 140
           T  LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A
Sbjct: 47  TSVLQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIA 106

Query: 141 LLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGCIISLLIAAYLAFQHFSR 200
           ++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G +I L+IA YL  +H   
Sbjct: 107 IIVRLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKA 166

Query: 201 AGSFQRAFDQ-NSIVATVAVVCI 216
           +G F+ +F Q N I  T+ +V +
Sbjct: 167 SGGFKNSFTQKNGISNTIGIVAL 189

[Close]

BLAST of CsGy1G021210 vs. TAIR 10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2 )

HSP 1 Score: 71.6 bits (174), Expect = 8.9e-13
Identity = 40/127 (31.50%), Postives = 76/127 (59.84%), Query Frame = 0


Query: 84  LQWISTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLV 143
           L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++
Sbjct: 51  LKFLASFAAIYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVL 110

Query: 144 RLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGS 203
           RLFF    P  LE+P   +LL++V+P +   ++RGT  G +ISL I  YL  +H   +G 
Sbjct: 111 RLFFPKHFPDWLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGG 170

The following BLAST results are available for this feature:

BLAST of CsGy1G021210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I1G5	4.2e-60	56.71	Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thalia...	[more]
Q94AL8	2.1e-59	53.25	Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thalia...	[more]
O23164	6.6e-13	32.87	Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SVL6	1.3e-11	31.50	Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9XIM7	1.1e-10	31.47	Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of CsGy1G021210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147401.1	1.16e-146	100.00	cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus] >KG...	[more]
XP_008443932.1	1.05e-141	95.63	PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucu...	[more]
XP_038896035.1	2.82e-130	89.08	cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispi...	[more]
XP_022994881.1	7.57e-121	83.84	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucu...	[more]
XP_022140053.1	1.58e-120	82.97	cold-regulated 413 inner membrane protein 1, chloroplastic-like [Momordica chara...	[more]

BLAST of CsGy1G021210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXM7	5.64e-147	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G459500 PE=3 SV=1	[more]
A0A5D3DB21	5.09e-142	95.63	Cold-regulated 413 inner membrane protein 2 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B961	5.09e-142	95.63	cold-regulated 413 inner membrane protein 2, chloroplastic-like OS=Cucumis melo ...	[more]
A0A6J1K0I6	3.66e-121	83.84	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cu...	[more]
A0A6J1CH44	7.65e-121	82.97	cold-regulated 413 inner membrane protein 1, chloroplastic-like OS=Momordica cha...	[more]

BLAST of CsGy1G021210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29390.1	3.0e-61	56.71	cold regulated 314 thylakoid membrane 2	[more]
AT1G29395.1	1.5e-60	53.25	COLD REGULATED 314 INNER MEMBRANE 1	[more]
AT1G29390.2	8.2e-59	66.28	cold regulated 314 thylakoid membrane 2	[more]
AT4G37220.1	4.7e-14	32.87	Cold acclimation protein WCOR413 family	[more]
AT3G50830.1	8.9e-13	31.50	cold-regulated 413-plasma membrane 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008892	Cold-regulated 413 protein	PFAM	PF05562	WCOR413	coord: 65..215 e-value: 4.8E-53 score: 179.8
IPR008892	Cold-regulated 413 protein	PANTHER	PTHR33596	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2	coord: 13..224
None	No IPR available	PANTHER	PTHR33596:SF17	COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 13..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G021210.2	CsGy1G021210.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane