CsGy1G020980 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G020980
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Gy14Chr1: 19679594 .. 19680920 (+)
RNA-Seq Expression	CsGy1G020980
Synteny	CsGy1G020980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCTCAAGCATGGCTCTATCCTCCCCCTCTTTCGCCGGAAAGGTGGTGAAACTCACCCCTTCCTCCCCCGAGCTTTTCGGCAACAGCAGAGTCACCATGAGGAAATCTGCCACCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGACCTGACCGTGTTAAGTATTTGGGCCCATTCTCCGGCGAGCCTCCATCCTATCTTACTGGAGAATTCCCGGGTGACTATGGTTGGGATACTGCTGGACTTTCTGCTGATCCTGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCTAGGTAACTAATAATTAAAAGCAAAGCTTTTCATATTCTTTAATAAGACTTTTTATACATGTAATCTCGTTAAGTCAAGTATTTTGTTTTCATTTTCTCTTTCAAAATTTAGTTCCTAAATATTTATTCTTTTACGTTGTTATCTTTTTTTGAGATCAAAATTTGAATTTTTTTTGTACTTGAAAATTAAATTTAGAGGATGATTTCTTCTTTTAAGAGTTTTTTTTTTTTTTTAATCTACTCTCTAAACAATACTATTTTCTAAATTTGTTTAAGTTTCTTAAACTAAAAAAATAATATTATTTTTAAAAACTTACTTTTTATTTTGAAATTTGACTCGCAGAGTTTAAATTCTATTTTGAAAAATACAAAATTTATAAGAAAATATACAGAAACTTTAAAGTCTAAACTATTCAAAGGGAGTGTTTAGATATACAAAAACTCAAATTGAGTTTGATTTGAACTTAATTCTTGGGTTTCAAACAAATAAATTAGATGATGTTTCCCTTGTTGACTTGGTGGTTTGCTTCAGGTGGGCTATGCTTGGAGCATTGGGTTGCGTGTTCCCAGAGCTTCTTTCCCGCAACGGTGTGAAGTTCGGAGAAGCAGTATGGTTCAAAGCCGGTTCTCAGATTTTCAGCGAAGGTGGACTCGACTACTTAGGAAACCCAAGTTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCCCAAGTTGTTCTCATGGGGGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTAGGGGAGGTGACCGATCCCATCTACCCAGGCGGGAGCTTTGACCCATTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTAGCTATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATTGTCACTGGAAAGGGTCCACTAGAGAATCTTGCGGACCATCTTACTGACCCAGTCAACAACAATGCTTGGGCTTACGCTACCAACTTTGTTCCTGGAAAATGA

mRNA sequence

ATGGCAGCCTCAAGCATGGCTCTATCCTCCCCCTCTTTCGCCGGAAAGGTGGTGAAACTCACCCCTTCCTCCCCCGAGCTTTTCGGCAACAGCAGAGTCACCATGAGGAAATCTGCCACCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGACCTGACCGTGTTAAGTATTTGGGCCCATTCTCCGGCGAGCCTCCATCCTATCTTACTGGAGAATTCCCGGGTGACTATGGTTGGGATACTGCTGGACTTTCTGCTGATCCTGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCTAGGTGGGCTATGCTTGGAGCATTGGGTTGCGTGTTCCCAGAGCTTCTTTCCCGCAACGGTGTGAAGTTCGGAGAAGCAGTATGGTTCAAAGCCGGTTCTCAGATTTTCAGCGAAGGTGGACTCGACTACTTAGGAAACCCAAGTTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCCCAAGTTGTTCTCATGGGGGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTAGGGGAGGTGACCGATCCCATCTACCCAGGCGGGAGCTTTGACCCATTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTAGCTATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATTGTCACTGGAAAGGGTCCACTAGAGAATCTTGCGGACCATCTTACTGACCCAGTCAACAACAATGCTTGGGCTTACGCTACCAACTTTGTTCCTGGAAAATGA

Coding sequence (CDS)

ATGGCAGCCTCAAGCATGGCTCTATCCTCCCCCTCTTTCGCCGGAAAGGTGGTGAAACTCACCCCTTCCTCCCCCGAGCTTTTCGGCAACAGCAGAGTCACCATGAGGAAATCTGCCACCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGACCTGACCGTGTTAAGTATTTGGGCCCATTCTCCGGCGAGCCTCCATCCTATCTTACTGGAGAATTCCCGGGTGACTATGGTTGGGATACTGCTGGACTTTCTGCTGATCCTGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCTAGGTGGGCTATGCTTGGAGCATTGGGTTGCGTGTTCCCAGAGCTTCTTTCCCGCAACGGTGTGAAGTTCGGAGAAGCAGTATGGTTCAAAGCCGGTTCTCAGATTTTCAGCGAAGGTGGACTCGACTACTTAGGAAACCCAAGTTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCCCAAGTTGTTCTCATGGGGGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTAGGGGAGGTGACCGATCCCATCTACCCAGGCGGGAGCTTTGACCCATTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTAGCTATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATTGTCACTGGAAAGGGTCCACTAGAGAATCTTGCGGACCATCTTACTGACCCAGTCAACAACAATGCTTGGGCTTACGCTACCAACTTTGTTCCTGGAAAATGA

Protein sequence

MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK*

Homology

[Close]

BLAST of CsGy1G020980 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 1.1e-142
Identity = 247/264 (93.56%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 2   AASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPF 61
           AASSMALSSPS AGK VKL PS+PE+    RV+MRK+ TK VSSGSPWYGPDRVKYLGPF
Sbjct: 3   AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPF 62

Query: 62  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 121
           SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN
Sbjct: 63  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 122

Query: 122 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPL 181
           GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGPL
Sbjct: 123 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPL 182

Query: 182 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
           GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 183 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 242

Query: 242 LADHLTDPVNNNAWAYATNFVPGK 266
           LADHL  PVNNNAWAYATNFVPGK
Sbjct: 243 LADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of CsGy1G020980 vs. ExPASy Swiss-Prot
Match: P27495 (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 5.2e-142
Identity = 243/267 (91.01%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSAT--KSVSSGSPWYGPDRVKYL 60
           MAAS+MALSSPSFAGK VKL+PSS E+ GN +VTMRK+A+  K+VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLTDPVNNNAWAYATNFVPGK 266
           LENLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of CsGy1G020980 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 1.2e-141
Identity = 238/255 (93.33%), Postives = 249/255 (97.65%), Query Frame = 0


Query: 11  PSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 70
           P+ AG+ VKL+P++PE+ GN++ TMRK+A+KSVSSGSPWYGPDRVKYLGPFSGEPPSYLT
Sbjct: 1   PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 60

Query: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 130
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW
Sbjct: 61  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120

Query: 131 FKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYP 190
           FKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYP
Sbjct: 121 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180

Query: 191 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPV 250
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPV
Sbjct: 181 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240

Query: 251 NNNAWAYATNFVPGK 266
           NNNAWAYATNFVPGK
Sbjct: 241 NNNAWAYATNFVPGK 255

[Close]

BLAST of CsGy1G020980 vs. ExPASy Swiss-Prot
Match: P27493 (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB21 PE=2 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 3.4e-141
Identity = 237/265 (89.43%), Postives = 253/265 (95.47%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAA++MALSSPSFAG+ VKL+PS+PE+ GN RV+MRK+  K V+S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 266
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 9.9e-141
Identity = 242/267 (90.64%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKS--VSSGSPWYGPDRVKYL 60
           MA S+MALSS +FAGK VKL+PSS E+ GN RVTMRK+ATK+   SSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLTDPVNNNAWAYATNFVPGK 266
           LENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CsGy1G020980 vs. NCBI nr
Match: XP_004147416.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN65549.1 hypothetical protein Csa_019882 [Cucumis sativus])

HSP 1 Score: 540 bits (1390), Expect = 1.28e-193
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 265
           NLADHLTDPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLTDPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. NCBI nr
Match: XP_008444193.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0053968.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK20653.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 529 bits (1362), Expect = 2.39e-189
Identity = 259/265 (97.74%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKLTPSSPELFGNSRV MRKSA KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 265
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. NCBI nr
Match: XP_022142169.1 (chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia])

HSP 1 Score: 521 bits (1341), Expect = 3.80e-186
Identity = 254/265 (95.85%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKLTPSSPEL GN RV+MRK  +KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 265
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. NCBI nr
Match: XP_038877609.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 521 bits (1341), Expect = 3.94e-186
Identity = 256/266 (96.24%), Postives = 260/266 (97.74%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNS-RVTMRKSATKSVSSGSPWYGPDRVKYLG 60
           MAAS+MALSSPS AGK VKLTPSSPEL GN  RV+MRKSA+KS+SSGSPWYGPDRVKYLG
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGGRVSMRKSASKSISSGSPWYGPDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG 180
           RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG 180

Query: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
           PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLADHLTDPVNNNAWAYATNFVPGK 265
           ENLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAYATNFVPGK 266

[Close]

BLAST of CsGy1G020980 vs. NCBI nr
Match: XP_023001458.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima])

HSP 1 Score: 519 bits (1336), Expect = 2.20e-185
Identity = 255/265 (96.23%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKLTPSS EL GN RV+MRKSA KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPSLAGKAVKLTPSSSELVGNGRVSMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 265
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. ExPASy TrEMBL
Match: A0A0A0LX23 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G445860 PE=3 SV=1)

HSP 1 Score: 540 bits (1390), Expect = 6.22e-194
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 265
           NLADHLTDPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLTDPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. ExPASy TrEMBL
Match: A0A5D3DAQ5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00370 PE=3 SV=1)

HSP 1 Score: 529 bits (1362), Expect = 1.16e-189
Identity = 259/265 (97.74%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKLTPSSPELFGNSRV MRKSA KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 265
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. ExPASy TrEMBL
Match: A0A1S3BAK6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487605 PE=3 SV=1)

HSP 1 Score: 529 bits (1362), Expect = 1.16e-189
Identity = 259/265 (97.74%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKLTPSSPELFGNSRV MRKSA KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 265
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. ExPASy TrEMBL
Match: A0A6J1CKT5 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012353 PE=3 SV=1)

HSP 1 Score: 521 bits (1341), Expect = 1.84e-186
Identity = 254/265 (95.85%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKLTPSSPEL GN RV+MRK  +KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 265
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. ExPASy TrEMBL
Match: A0A6J1KQK6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495586 PE=3 SV=1)

HSP 1 Score: 519 bits (1336), Expect = 1.06e-185
Identity = 255/265 (96.23%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKLTPSS EL GN RV+MRKSA KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPSLAGKAVKLTPSSSELVGNGRVSMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 265
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 482.6 bits (1241), Expect = 2.0e-136
Identity = 230/266 (86.47%), Postives = 249/266 (93.61%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSP+  GK VKL+P++ E+FG  R+TMRK++  +  SGSPWYG DRVKYLGP
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-G 180
           NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180

Query: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLADHLTDPVNNNAWAYATNFVPGK 266
           ENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of CsGy1G020980 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 478.8 bits (1231), Expect = 2.9e-135
Identity = 231/267 (86.52%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLG 60
           MAAS+MALSSP+FAGK VKL+P++ E+ G+ RVTMRK+  K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLTDPVNNNAWAYATNFVPGK 266
           +ENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CsGy1G020980 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 476.9 bits (1226), Expect = 1.1e-134
Identity = 230/267 (86.14%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLG 60
           MAAS+MALSSP+FAGK V L+P++ E+ G+ RVTMRK+  K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLTDPVNNNAWAYATNFVPGK 266
           +ENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CsGy1G020980 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 476.9 bits (1226), Expect = 1.1e-134
Identity = 230/267 (86.14%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLG 60
           MAAS+MALSSP+FAGK V L+P++ E+ G+ RVTMRK+  K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLTDPVNNNAWAYATNFVPGK 266
           +ENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CsGy1G020980 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 473.8 bits (1218), Expect = 9.2e-134
Identity = 230/267 (86.14%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLG 60
           MA+S+MALSSP+FAGK VK  P++ ++ G+ RVTMRK+  K    SGSPWYG DRVKYLG
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLTDPVNNNAWAYATNFVPGK 266
           LENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of CsGy1G020980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P09756	1.1e-142	93.56	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
P27495	5.2e-142	91.01	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P08221	1.2e-141	93.33	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P27493	3.4e-141	89.43	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P07369	9.9e-141	90.64	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]

BLAST of CsGy1G020980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147416.1	1.28e-193	100.00	chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN65549...	[more]
XP_008444193.1	2.39e-189	97.74	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >...	[more]
XP_022142169.1	3.80e-186	95.85	chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia]	[more]
XP_038877609.1	3.94e-186	96.24	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]
XP_023001458.1	2.20e-185	96.23	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima]	[more]

BLAST of CsGy1G020980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX23	6.22e-194	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5D3DAQ5	1.16e-189	97.74	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BAK6	1.16e-189	97.74	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1CKT5	1.84e-186	95.85	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1KQK6	1.06e-185	96.23	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of CsGy1G020980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	2.0e-136	86.47	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT1G29930.1	2.9e-135	86.52	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	1.1e-134	86.14	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	1.1e-134	86.14	chlorophyll A/B-binding protein 2	[more]
AT2G34420.1	9.2e-134	86.14	photosystem II light harvesting complex gene B1B2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 56..258 e-value: 2.0E-90 score: 304.1
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 65..231 e-value: 2.1E-49 score: 168.1
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..265
None	No IPR available	PANTHER	PTHR21649:SF88	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 1..265
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 48..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G020980.1	CsGy1G020980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding