CsGy1G020835 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G020835
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Cotton fiber protein
Location	Gy14Chr1: 19487891 .. 19488601 (+)
RNA-Seq Expression	CsGy1G020835
Synteny	CsGy1G020835

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACCTAATTCAATTTCACGGCCTCAAAATCTAGTAGTAGTAGAAAATAGTATTCCATTTCTTCCTTATGACAAACCCAAACCACAACCTTATAACAAATATACAAATGATTACTTGTTAGCCTTCTTCTCTTCCCTATTATTCCTTCTCTCCATCTTCATTATTTTCATTTCCATCTTCAAAAACCTCTCTTTTTCATCTCTCTTCAACAGCACCGTTTTTTGGTTCTTCATTTCTAACACTCTCATCTTCATAATTGCTGTTGATTATGGTCTTTTCTCTCTCTCCCAACACAAAAGTTTCCATCTTTATGAAGATTATTATTACTCACCACCAAACCCAAAGTTAACTCATTTTCAACTTCAAACCTCTTCATTAGTAGTATTTGATGAAAAGAGAGAAACCCCAGATGAGAAATTGGAAACTGTGGTTCAAAGTCAACGACTCGACTCCCCATCGAAGAACACAACGACACCGGTGAGAACTTACCTGCGGAGGAAGTCGGAGAAACCGAAAAGAATTGTGTCAATGGAGATCAGCAAGAAAATGATGGGGAAGAGACGATCAGAAAGTGTAAAGAATGAAGGAAAGGAATTAGAAGATGAAAATGAGTTTGCAAAGATGACGGACGAAGAATTGAATAGAAGAGTGGAGGAGTTTATTCAAAGATTTAATAAACAAATGAGACTTCAAACTAAACTCAACTGA

mRNA sequence

ATGTCACCTAATTCAATTTCACGGCCTCAAAATCTAGTAGTAGTAGAAAATAGTATTCCATTTCTTCCTTATGACAAACCCAAACCACAACCTTATAACAAATATACAAATGATTACTTGTTAGCCTTCTTCTCTTCCCTATTATTCCTTCTCTCCATCTTCATTATTTTCATTTCCATCTTCAAAAACCTCTCTTTTTCATCTCTCTTCAACAGCACCGTTTTTTGGTTCTTCATTTCTAACACTCTCATCTTCATAATTGCTGTTGATTATGGTCTTTTCTCTCTCTCCCAACACAAAAGTTTCCATCTTTATGAAGATTATTATTACTCACCACCAAACCCAAAGTTAACTCATTTTCAACTTCAAACCTCTTCATTAGTAGTATTTGATGAAAAGAGAGAAACCCCAGATGAGAAATTGGAAACTGTGGTTCAAAGTCAACGACTCGACTCCCCATCGAAGAACACAACGACACCGGTGAGAACTTACCTGCGGAGGAAGTCGGAGAAACCGAAAAGAATTGTGTCAATGGAGATCAGCAAGAAAATGATGGGGAAGAGACGATCAGAAAGTGTAAAGAATGAAGGAAAGGAATTAGAAGATGAAAATGAGTTTGCAAAGATGACGGACGAAGAATTGAATAGAAGAGTGGAGGAGTTTATTCAAAGATTTAATAAACAAATGAGACTTCAAACTAAACTCAACTGA

Coding sequence (CDS)

ATGTCACCTAATTCAATTTCACGGCCTCAAAATCTAGTAGTAGTAGAAAATAGTATTCCATTTCTTCCTTATGACAAACCCAAACCACAACCTTATAACAAATATACAAATGATTACTTGTTAGCCTTCTTCTCTTCCCTATTATTCCTTCTCTCCATCTTCATTATTTTCATTTCCATCTTCAAAAACCTCTCTTTTTCATCTCTCTTCAACAGCACCGTTTTTTGGTTCTTCATTTCTAACACTCTCATCTTCATAATTGCTGTTGATTATGGTCTTTTCTCTCTCTCCCAACACAAAAGTTTCCATCTTTATGAAGATTATTATTACTCACCACCAAACCCAAAGTTAACTCATTTTCAACTTCAAACCTCTTCATTAGTAGTATTTGATGAAAAGAGAGAAACCCCAGATGAGAAATTGGAAACTGTGGTTCAAAGTCAACGACTCGACTCCCCATCGAAGAACACAACGACACCGGTGAGAACTTACCTGCGGAGGAAGTCGGAGAAACCGAAAAGAATTGTGTCAATGGAGATCAGCAAGAAAATGATGGGGAAGAGACGATCAGAAAGTGTAAAGAATGAAGGAAAGGAATTAGAAGATGAAAATGAGTTTGCAAAGATGACGGACGAAGAATTGAATAGAAGAGTGGAGGAGTTTATTCAAAGATTTAATAAACAAATGAGACTTCAAACTAAACTCAACTGA

Protein sequence

MSPNSISRPQNLVVVENSIPFLPYDKPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISIFKNLSFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHFQLQTSSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEISKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTKLN*

Homology

[Close]

BLAST of CsGy1G020835 vs. NCBI nr
Match: KAE8653186.1 (hypothetical protein Csa_020019 [Cucumis sativus])

HSP 1 Score: 438 bits (1126), Expect = 2.43e-154
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MSPNSISRPQNLVVVENSIPFLPYDKPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISI 60
           MSPNSISRPQNLVVVENSIPFLPYDKPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISI
Sbjct: 1   MSPNSISRPQNLVVVENSIPFLPYDKPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISI 60

Query: 61  FKNLSFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHF 120
           FKNLSFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHF
Sbjct: 61  FKNLSFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHF 120

Query: 121 QLQTSSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEI 180
           QLQTSSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEI
Sbjct: 121 QLQTSSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEI 180

Query: 181 SKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTKLN 236
           SKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTKLN
Sbjct: 181 SKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTKLN 236

[Close]

BLAST of CsGy1G020835 vs. NCBI nr
Match: XP_038877172.1 (uncharacterized protein LOC120069472 [Benincasa hispida])

HSP 1 Score: 301 bits (772), Expect = 1.44e-100
Identity = 187/237 (78.90%), Postives = 201/237 (84.81%), Query Frame = 0


Query: 1   MSPNSISRPQNLVVVENSIPFLPYDKPKPQP-YNKYTNDYLLAFFSSLLFLLSIFIIFIS 60
           MS NSIS PQNL+VV+NS  FLPY+KPK Q  YNKY NDY+LAFFSSLLFLLSIFIIFIS
Sbjct: 1   MSSNSIS-PQNLLVVDNS--FLPYNKPKSQSNYNKYANDYILAFFSSLLFLLSIFIIFIS 60

Query: 61  IFKNLSFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTH 120
           IFKNLS  SLFNST+FWFFISNTLIFIIAVDYG+FSL QHKSFHLYED+  SP NPKL H
Sbjct: 61  IFKNLSLPSLFNSTIFWFFISNTLIFIIAVDYGVFSLPQHKSFHLYEDF--SPSNPKLNH 120

Query: 121 FQLQTSSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSME 180
           F+L +SSLVVFDEK+ET  EKLE VVQ ++LDSP K   TP RT  RRKSEKPK IVS E
Sbjct: 121 FRLPSSSLVVFDEKKETTREKLELVVQGRQLDSPWK--MTPARTCRRRKSEKPKGIVSKE 180

Query: 181 ISKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTKLN 236
            S KMMGKR SESVK E KELE ENEF KMTDEELNRRVEEFIQRFN+QMRLQTK+N
Sbjct: 181 -SNKMMGKR-SESVKYEAKELE-ENEFEKMTDEELNRRVEEFIQRFNRQMRLQTKIN 227

[Close]

BLAST of CsGy1G020835 vs. NCBI nr
Match: XP_023001467.1 (uncharacterized protein LOC111495593 [Cucurbita maxima])

HSP 1 Score: 259 bits (663), Expect = 6.46e-84
Identity = 162/230 (70.43%), Postives = 178/230 (77.39%), Query Frame = 0


Query: 6   ISRPQNLVVVENSIPFLPYD-KPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISIFKNL 65
           +S   NLV ++N  PF+PY  KPKP  YNKYTND +LAFFSSLLFLLS    F  IFKNL
Sbjct: 1   MSSHSNLVSLDN--PFMPYKPKPKPNTYNKYTNDCILAFFSSLLFLLS----FCIIFKNL 60

Query: 66  SFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHFQLQT 125
           SFSSLFNST+FWFFISNTLIFIIA DY  FSLSQ+K  H YE  +YSPPNPK+THFQ QT
Sbjct: 61  SFSSLFNSTIFWFFISNTLIFIIAADYAYFSLSQYKRSHFYE--HYSPPNPKITHFQHQT 120

Query: 126 SSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEISKKM 185
           SS VVF+EKRE PD  L+ +VQ  R DS     TTPVRTY R KSEKPKR VS E  KKM
Sbjct: 121 SSFVVFEEKREYPDGNLQNIVQD-RCDSLPPLKTTPVRTYQRSKSEKPKRTVSKESKKKM 180

Query: 186 MGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTK 234
              +RSES K EGKELE ENE++KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 181 A--KRSESGKYEGKELE-ENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 218

[Close]

BLAST of CsGy1G020835 vs. NCBI nr
Match: XP_022927149.1 (uncharacterized protein LOC111434084 [Cucurbita moschata])

HSP 1 Score: 252 bits (644), Expect = 4.94e-81
Identity = 161/230 (70.00%), Postives = 175/230 (76.09%), Query Frame = 0


Query: 6   ISRPQNLVVVENSIPFLPYD-KPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISIFKNL 65
           +S   NLV V+N  PF+PY  KPKP   NKYTNDY+LAFFSSLL LLS    F  IFKNL
Sbjct: 1   MSSHSNLVSVDN--PFMPYKPKPKPNTCNKYTNDYILAFFSSLLLLLS----FCIIFKNL 60

Query: 66  SFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHFQLQT 125
           SFSSLFNST+FWFFISN LIFIIA DY  FSLSQ+K  HLYE  +YSPPNPK+THFQ QT
Sbjct: 61  SFSSLFNSTMFWFFISNALIFIIAADYAYFSLSQYKRSHLYE--HYSPPNPKMTHFQHQT 120

Query: 126 SSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEISKKM 185
           SS VVFDEKRE PD  L+  V  +R DS     TTPVRTY R KSEKPKR VS E  KKM
Sbjct: 121 SSFVVFDEKREYPDGNLQNFVP-ERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKM 180

Query: 186 MGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTK 234
              +RSES K E KELE ENE++KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 181 A--KRSESGKYEEKELE-ENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 218

[Close]

BLAST of CsGy1G020835 vs. NCBI nr
Match: XP_023520225.1 (uncharacterized protein LOC111783530 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214 bits (546), Expect = 1.08e-66
Identity = 138/195 (70.77%), Postives = 149/195 (76.41%), Query Frame = 0


Query: 40  LLAFFSSLLFLLSIFIIFISIFKNLSFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQH 99
           +LAFFSSLLFLL     F  IFKNLSFSSLFNST+FWFFISN LIFIIA DY  FSL+Q+
Sbjct: 1   MLAFFSSLLFLL----FFCIIFKNLSFSSLFNSTMFWFFISNALIFIIAADYAYFSLTQY 60

Query: 100 KSFHLYEDYYYSPPNPKLTHFQLQTSSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTT 159
           K  HLYE  +YSPPNPK+THFQ QTSS VVFDEKRE PD  L   VQ +R DS     TT
Sbjct: 61  KRSHLYE--HYSPPNPKMTHFQRQTSSFVVFDEKREYPDGNLRNFVQ-ERCDSMPLLKTT 120

Query: 160 PVRTYLRRKSEKPKRIVSMEISKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVE 219
           PVRTY R KSEKPKR VS E  KKM   +R ES   E KELE ENE++KMTDEELNRRVE
Sbjct: 121 PVRTYERSKSEKPKRSVSKESKKKMA--KRLESGMYEEKELE-ENEYSKMTDEELNRRVE 180

Query: 220 EFIQRFNKQMRLQTK 234
           EFIQRFN QMRL+TK
Sbjct: 181 EFIQRFNTQMRLETK 185

[Close]

BLAST of CsGy1G020835 vs. ExPASy TrEMBL
Match: A0A0A0M033 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435810 PE=4 SV=1)

HSP 1 Score: 370 bits (951), Expect = 1.75e-128
Identity = 203/236 (86.02%), Postives = 203/236 (86.02%), Query Frame = 0


Query: 1   MSPNSISRPQNLVVVENSIPFLPYDKPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISI 60
           MSPNSISRPQNLVVVENSIPFLPYDKPKPQPYNKYTNDY                     
Sbjct: 1   MSPNSISRPQNLVVVENSIPFLPYDKPKPQPYNKYTNDYF-------------------- 60

Query: 61  FKNLSFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHF 120
                       TVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHF
Sbjct: 61  ------------TVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHF 120

Query: 121 QLQTSSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEI 180
           QLQTSSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEI
Sbjct: 121 QLQTSSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEI 180

Query: 181 SKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTKLN 236
           SKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTKLN
Sbjct: 181 SKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTKLN 204

[Close]

BLAST of CsGy1G020835 vs. ExPASy TrEMBL
Match: A0A6J1KGM0 (uncharacterized protein LOC111495593 OS=Cucurbita maxima OX=3661 GN=LOC111495593 PE=4 SV=1)

HSP 1 Score: 259 bits (663), Expect = 3.13e-84
Identity = 162/230 (70.43%), Postives = 178/230 (77.39%), Query Frame = 0


Query: 6   ISRPQNLVVVENSIPFLPYD-KPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISIFKNL 65
           +S   NLV ++N  PF+PY  KPKP  YNKYTND +LAFFSSLLFLLS    F  IFKNL
Sbjct: 1   MSSHSNLVSLDN--PFMPYKPKPKPNTYNKYTNDCILAFFSSLLFLLS----FCIIFKNL 60

Query: 66  SFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHFQLQT 125
           SFSSLFNST+FWFFISNTLIFIIA DY  FSLSQ+K  H YE  +YSPPNPK+THFQ QT
Sbjct: 61  SFSSLFNSTIFWFFISNTLIFIIAADYAYFSLSQYKRSHFYE--HYSPPNPKITHFQHQT 120

Query: 126 SSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEISKKM 185
           SS VVF+EKRE PD  L+ +VQ  R DS     TTPVRTY R KSEKPKR VS E  KKM
Sbjct: 121 SSFVVFEEKREYPDGNLQNIVQD-RCDSLPPLKTTPVRTYQRSKSEKPKRTVSKESKKKM 180

Query: 186 MGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTK 234
              +RSES K EGKELE ENE++KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 181 A--KRSESGKYEGKELE-ENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 218

[Close]

BLAST of CsGy1G020835 vs. ExPASy TrEMBL
Match: A0A6J1EH73 (uncharacterized protein LOC111434084 OS=Cucurbita moschata OX=3662 GN=LOC111434084 PE=4 SV=1)

HSP 1 Score: 252 bits (644), Expect = 2.39e-81
Identity = 161/230 (70.00%), Postives = 175/230 (76.09%), Query Frame = 0


Query: 6   ISRPQNLVVVENSIPFLPYD-KPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISIFKNL 65
           +S   NLV V+N  PF+PY  KPKP   NKYTNDY+LAFFSSLL LLS    F  IFKNL
Sbjct: 1   MSSHSNLVSVDN--PFMPYKPKPKPNTCNKYTNDYILAFFSSLLLLLS----FCIIFKNL 60

Query: 66  SFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHFQLQT 125
           SFSSLFNST+FWFFISN LIFIIA DY  FSLSQ+K  HLYE  +YSPPNPK+THFQ QT
Sbjct: 61  SFSSLFNSTMFWFFISNALIFIIAADYAYFSLSQYKRSHLYE--HYSPPNPKMTHFQHQT 120

Query: 126 SSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEISKKM 185
           SS VVFDEKRE PD  L+  V  +R DS     TTPVRTY R KSEKPKR VS E  KKM
Sbjct: 121 SSFVVFDEKREYPDGNLQNFVP-ERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKM 180

Query: 186 MGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTK 234
              +RSES K E KELE ENE++KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 181 A--KRSESGKYEEKELE-ENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 218

[Close]

BLAST of CsGy1G020835 vs. ExPASy TrEMBL
Match: A0A7N2LQF9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 105 bits (261), Expect = 8.37e-24
Identity = 98/245 (40.00%), Postives = 135/245 (55.10%), Query Frame = 0


Query: 9   PQNLVVVENSIPFLPYDKPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISIFKNLSFSS 68
           P NLV  E+SI   PY   K  P       +  + FS  +++  ++I       NLS S+
Sbjct: 5   PPNLV--EDSIK--PYISSKNYPQKAKGLSFYASLFSIFIYISVLYIF------NLSPSA 64

Query: 69  LFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYY----------YSPPNPKLT 128
           LF +T FWFF+SNTLI IIAVDYG +S S  K   LY++Y           + P   K+ 
Sbjct: 65  LFYNTKFWFFLSNTLILIIAVDYGAYSSSNEKQ-DLYQEYVKRTQVKNVPSFVPQYQKIV 124

Query: 129 HFQLQTSSLVVFDEKRET--------PDEKLETVVQSQRLDSPSKNTTTPVR--TYLRRK 188
                   +  F EKRE         P+  L+ V++S   + PS++    ++  TY R K
Sbjct: 125 KQSTPKQKVDSFQEKREVIVQEVQVFPERNLQVVIKSD-SEKPSEDLREKIKAKTYRRSK 184

Query: 189 SEKPKRIVSMEISKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQ 233
           SE+ KR+V  E SK ++  R SE+ KNE      ENEF+ M+DEELNRRVEEFIQRFN++
Sbjct: 185 SEQAKRVVIDE-SKNIIT-RSSETEKNE------ENEFSTMSDEELNRRVEEFIQRFNRE 229

[Close]

BLAST of CsGy1G020835 vs. ExPASy TrEMBL
Match: A0A6J5UKK6 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS25575 PE=4 SV=1)

HSP 1 Score: 101 bits (251), Expect = 4.14e-22
Identity = 103/257 (40.08%), Postives = 137/257 (53.31%), Query Frame = 0


Query: 6   ISRPQNLVVVENSIPFLPYDKPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISIFKNLS 65
           +++P +  +V++S+   PY KPK     K      LAFF S+ F +SIF IF     NLS
Sbjct: 1   MAKPPSTNLVQDSMK--PY-KPKKYYPEKAKGVSFLAFFVSICFYISIFYIF-----NLS 60

Query: 66  FSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQH--KSFHLYEDYYYSPPNPKLTHFQLQ 125
            S+LF++T FWF ISNTLI IIA DYG FS S    +  HLY++Y        ++ F  Q
Sbjct: 61  LSTLFHNTKFWFAISNTLILIIAADYGAFSSSNDNIQDQHLYQEYMIYRQARSVSSFVSQ 120

Query: 126 T--------------SSLVVFDEK---RETPDEKLETVVQSQRLDSPSKNTT-------- 185
                          S + V D K    E  D + + VVQ + +   SK           
Sbjct: 121 YPEIAFKKSSCPNKHSEVDVDDMKAKNEEVADTQNKEVVQEKSVVHVSKGDVQNKGCARE 180

Query: 186 -TPVRTYLRRKSEKPK-RIVSMEISKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNR 233
               +TY R KSEK K +   ++  KK + KR  +  K E   +ED NEF+ M+DEELNR
Sbjct: 181 NVAAKTYQRSKSEKTKTKGAVIDERKKDILKRSEDEKKYEPNTVED-NEFSVMSDEELNR 240

[Close]

BLAST of CsGy1G020835 vs. TAIR 10
Match: AT1G30190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34610.1); Has 56 Blast hits to 56 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-11
Identity = 89/276 (32.25%), Postives = 127/276 (46.01%), Query Frame = 0


Query: 19  IPFLPYDKPKPQP-YNKYTNDYLLAFFSSLLFLLSIFIIFISIFKNLSFSSLFNSTVFWF 78
           +P    + PK +P   +Y +  +L  F  +   + IF +F      +S SS+F  T   F
Sbjct: 4   MPSYMIENPKFEPKKRRYYSSSMLTIFLPIFTYIMIFHVF-----EVSLSSVFKDTKVLF 63

Query: 79  FISNTLIFIIAVDYGLFSLSQHKSFHLYEDY------------YYSP------------- 138
           FISNTLI IIA DYG FS  + + F  Y +Y             YSP             
Sbjct: 64  FISNTLILIIAADYGSFSDKESQDF--YGEYTVAAATMRNRADNYSPIPVLTYRENTKDG 123

Query: 139 --PNPKLTHFQLQTSS-----------------LVVFDEKRETPDEKLETV--VQSQRLD 198
              NPK   F+                      + V  EK++  D  +E    V  Q L 
Sbjct: 124 EIKNPKDVEFRNPEEEDEPMVKDIICVSPPEKIVRVVSEKKQRDDVAMEEYKPVTEQTLA 183

Query: 199 SP----SKNTTTPVRTYLRRKSEKPKR---IVSMEISK-KMMGKRRSE----SVKNEGKE 234
           S     ++N   P + Y R KS+KP+R    V  E +K K  G+++S+     V  E  E
Sbjct: 184 SEEACNTRNHVNPNKPYGRSKSDKPRRKRLSVDTETTKRKSYGRKKSDCSRWMVIPEKWE 243

[Close]

BLAST of CsGy1G020835 vs. TAIR 10
Match: AT2G34610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits to 279 proteins in 74 species: Archae - 0; Bacteria - 7; Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-05
Identity = 90/296 (30.41%), Postives = 125/296 (42.23%), Query Frame = 0


Query: 14  VVENSIPFLPYDKPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISIFKNLSFS--SLFN 73
           VVE  + F PY KPK Q Y  Y+        S L  +LSIF  +I IF  L  S  S+FN
Sbjct: 8   VVETPL-FEPY-KPKKQ-YKLYS--------SLLPIILSIF-TYILIFHVLDVSPLSIFN 67

Query: 74  STVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDY-------YYSPPNPKLTHFQLQT 133
            T   F ISN LI IIA DYG F+  ++  F  Y +Y           P P+ + + +  
Sbjct: 68  DTKILFVISNALIIIIAADYGAFTDKENLDF--YGEYTAAMRRDAQENPRPEKSVYGVSM 127

Query: 134 SSLVVFDEKRETP-------DEKL--------ETVVQSQRLDSPSKNT---TTPV----- 193
           +      EK+E P       D+ L        E ++Q+   + P         PV     
Sbjct: 128 AEETKNREKQEGPVGARDLQDQYLPNKKAKVTERIIQAVSKNQPRNKAIEKCEPVTEQNV 187

Query: 194 ------------------RTYLRRKSEKPKRIV-------------------SMEISKKM 233
                             + Y R KS+K +  V                   S   S K 
Sbjct: 188 HIIAAKEETCNASNLMNSKAYGRSKSDKARGSVISKERRRQEIKHRHKSYDRSQSDSSKW 247

The following BLAST results are available for this feature:

BLAST of CsGy1G020835 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G020835 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653186.1	2.43e-154	100.00	hypothetical protein Csa_020019 [Cucumis sativus]	[more]
XP_038877172.1	1.44e-100	78.90	uncharacterized protein LOC120069472 [Benincasa hispida]	[more]
XP_023001467.1	6.46e-84	70.43	uncharacterized protein LOC111495593 [Cucurbita maxima]	[more]
XP_022927149.1	4.94e-81	70.00	uncharacterized protein LOC111434084 [Cucurbita moschata]	[more]
XP_023520225.1	1.08e-66	70.77	uncharacterized protein LOC111783530 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy1G020835 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M033	1.75e-128	86.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435810 PE=4 SV=1	[more]
A0A6J1KGM0	3.13e-84	70.43	uncharacterized protein LOC111495593 OS=Cucurbita maxima OX=3661 GN=LOC111495593...	[more]
A0A6J1EH73	2.39e-81	70.00	uncharacterized protein LOC111434084 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]
A0A7N2LQF9	8.37e-24	40.00	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A6J5UKK6	4.14e-22	40.08	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS25575 PE=4 S...	[more]

BLAST of CsGy1G020835 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30190.1	3.9e-11	32.25	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G34610.1	4.2e-05	30.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 190..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..207
None	No IPR available	PANTHER	PTHR35997	COTTON FIBER PROTEIN-RELATED	coord: 44..234
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 211..232 e-value: 8.3E-8 score: 31.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G020835.1	CsGy1G020835.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane