CsGy1G020425 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G020425
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 19120039 .. 19120862 (+)
RNA-Seq ExpressionCsGy1G020425
SyntenyCsGy1G020425
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGGAGTTAAGTGGAGTTGGGATGGGGACTATGGGGCTGGAAAGGTAGAATTTCATATTGGGTTCCGATGGCACCACCATAATGGCAGTAAAGTGCTTAACACGAGGGCAAAAATTTGTCTTAGGAAGATTGTTGGTGGTATGATTTGTTTTGTGCACAGGTTTTTTTCAAAAGAGCAGAAGAGGAAAGGTGAAGAGAGAAGTAATTTGGACTGGATGAAGGAAGAAAATGCGTATGAGTGTATCTGATTGTGAAAGAGAGAATAAGTTGTATGAGTGTATCTGATTGTGAAAGAGAGAATAAGTTTGTCACCGAAGAGGCTGAAAGAGAAAGATGAGAAGACTTGTTCCGAGTGTAAATCAAAAGACGATGCATGGGATAAGTCAACAGTAGAGAGAGGTTATTGTTTGGGCAGAAAAATAGATGATAGTGAAAGCTGGTTGGAATCTTTAATTAGAAAGATGAATTTCAAACCTTCTTTTTCATTCCCTTGAGGGATGATGACTTTTTTAAGGCTCTATTAATGGCAAGCTTAACAACTTCTACACAATGTCCTTTCCGGTAGGTAAACTTTTTCAACTCATAGGTCGTATTCATCAAGACAACATTTTTGGAAGAACTTTTGGTGAACGGGGTTGTCAATCAATGCGACATAAACAAGGGCTATCCAACAACAAAACTCCTTCTGAGATGGACTGAAAGATCTCTCTTTCCAATCTTCATGATGCACAAGCCATGGTCAAGTTCAATGGAGAAGATCTTTTTTGTCGATAGTGAAGGACGGAAGTCGAGAGGAAAAAAGGGCGAGACATGTCATTGA

mRNA sequence

ATGAGGGGAGTTAAGTGGAGTTGGGATGGGGACTATGGGGCTGGAAAGGTAGAATTTCATATTGGGTTCCGATGGCACCACCATAATGGCAGTAAAGTGCTTAACACGAGGGCAAAAATTTGTCTTAGGAAGATTGTTGGTGAGAGAATAAGTTTGTCACCGAAGAGGCTGAAAGAGAAAGATGAGAAGACTTGTTCCGAGTGTAAATCAAAAGACGATGCATGGGATAAGTCAACAGTCGTATTCATCAAGACAACATTTTTGGAAGAACTTTTGGTGAACGGGGTTGTCAATCAATGCGACATAAACAAGGGCTATCCAACAACAAAACTCCTTCTGAGATGGACTGAAAGATCTCTCTTTCCAATCTTCATGATGCACAAGCCATGGTCAAGTTCAATGGAGAAGATCTTTTTTGTCGATAGTGAAGGACGGAAGTCGAGAGGAAAAAAGGGCGAGACATGTCATTGA

Coding sequence (CDS)

ATGAGGGGAGTTAAGTGGAGTTGGGATGGGGACTATGGGGCTGGAAAGGTAGAATTTCATATTGGGTTCCGATGGCACCACCATAATGGCAGTAAAGTGCTTAACACGAGGGCAAAAATTTGTCTTAGGAAGATTGTTGGTGAGAGAATAAGTTTGTCACCGAAGAGGCTGAAAGAGAAAGATGAGAAGACTTGTTCCGAGTGTAAATCAAAAGACGATGCATGGGATAAGTCAACAGTCGTATTCATCAAGACAACATTTTTGGAAGAACTTTTGGTGAACGGGGTTGTCAATCAATGCGACATAAACAAGGGCTATCCAACAACAAAACTCCTTCTGAGATGGACTGAAAGATCTCTCTTTCCAATCTTCATGATGCACAAGCCATGGTCAAGTTCAATGGAGAAGATCTTTTTTGTCGATAGTGAAGGACGGAAGTCGAGAGGAAAAAAGGGCGAGACATGTCATTGA

Protein sequence

MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEKDEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSLFPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH*
Homology
[Close]
BLAST of CsGy1G020425 vs. NCBI nr
Match: KGN65489.1 (hypothetical protein Csa_019800 [Cucumis sativus])

HSP 1 Score: 332 bits (852), Expect = 3.26e-115
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 1   MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEK 60
           MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEK
Sbjct: 1   MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEK 60

Query: 61  DEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSL 120
           DEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSL
Sbjct: 61  DEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSL 120

Query: 121 FPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH 156
           FPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH
Sbjct: 121 FPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH 156

[Close]
BLAST of CsGy1G020425 vs. ExPASy TrEMBL
Match: A0A0A0LWY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425930 PE=4 SV=1)

HSP 1 Score: 332 bits (852), Expect = 1.58e-115
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 1   MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEK 60
           MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEK
Sbjct: 1   MRGVKWSWDGDYGAGKVEFHIGFRWHHHNGSKVLNTRAKICLRKIVGERISLSPKRLKEK 60

Query: 61  DEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSL 120
           DEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSL
Sbjct: 61  DEKTCSECKSKDDAWDKSTVVFIKTTFLEELLVNGVVNQCDINKGYPTTKLLLRWTERSL 120

Query: 121 FPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH 156
           FPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH
Sbjct: 121 FPIFMMHKPWSSSMEKIFFVDSEGRKSRGKKGETCH 156

The following BLAST results are available for this feature:
BLAST of CsGy1G020425 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G020425 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65489.13.26e-115100.00hypothetical protein Csa_019800 [Cucumis sativus][more]
BLAST of CsGy1G020425 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWY41.58e-115100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425930 PE=4 SV=1[more]
BLAST of CsGy1G020425 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G020425.1CsGy1G020425.1mRNA