CsGy1G018640 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G018640
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	zinc finger Ran-binding domain-containing protein 2-like
Location	Gy14Chr1: 16793583 .. 16795402 (+)
RNA-Seq Expression	CsGy1G018640
Synteny	CsGy1G018640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAGGCAAGGGAATAAAAGAAAAACCACCATAAAATGGACCCCAAAGCTAAGAGAACTTGGCCAACTATATAAACCCCTCGTCCCCCCATCAAACAAATTCAACAAACTCTCACTTCTAACCAAATTTAAATTCAAATTCACCTATTACCCAACAAGAACCATTCATTATTCCATCCATTTTATTTTCTTCATCAAGGTGAGCTTCCTACTTCAGCAATCAAACTTTTTTTTTCCCACTCTTTTAGCGTTCTCTTATTATCTAGCTTTTAGGATTCAATCTTTTCAAAGAAAAAAAAATGTTAGCCATCCATACTAGCCTTTGGGGAAAAAGGAGTATTTAAATTTTGAATTCTTAAGTTTCATTTCCTCCCTTCTTTTTTGTTTTGTACTCCAAAGCTTGAACATTGCTGAAGATTATGACAGAGTTTTAAATTCTTTACGCAGTTTTTTATTTGTTTATCTCTCATCTTATGAGTAATGTGATTTTTATATATAGAAGGGAATGAGTTGGTCAGCAGGAGATTGGATATGCAACGTTTGCCAGAACGTAAACTTTAAAAAAAGAGAAGCATGCCATCGATGTGGTTACCCCAAGTATGGAGGTCCAGACCCATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCCAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCGGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATTTGCCCTAGGTACATACAGAACATTAATAAACTTAGAGTTGAAGTTGTTATTGTATGCTATGAAATTACATAGTTCGTAATCATTAAAATCCTTTCTCATTGACAATCACTCTGAAACATTTTTGTAATCAATAAAAATCCATTTGGATAGTATAAAAGTCGAGTTTCCAAACGTAGTAAACAATCCAACATTAATAAACAATCCAACTTACCAAGTTCGATAATGTTATTTAAATTCATACCAGCACTAAATATGCTAATTTAAAAGTTAATGTTATGCTGTACAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTAAGTTTATATCAATTAAAACTTCTCTGTTTATTTGCCCCTAAAAAGTGGTTAGTAAAATTAACCAGTGGATGGGGTTTAATTTCTTTGTAGGTCACTTGGGTGTGTGATACAATTTTGGGTGCTCTATCTTTCAGGTGGTGCAGTGTAAAGCGGGAAGGAATTTTGGAAGGCTCTCCTTATGCGATATATCGTCTTCCTTGGCATCTAATCCCTATCCAAATGCTGCCTTTTTCTTTTTTTCTTTTTTTCTTTTTAAATGACTAACAACAATAATGTTAAGCCCTTAGAATGATCCTCAATTTAGATATCATGGGTGAAGGCCCATTTTTCCATTCAAGCATTGCAATATAGCTAGCTACTCTCTCTATCTCTCTCTCTAATCGGTGCGCAGAACGGGAACAAACATATCCGAATACTGAATTTGGATGGTCCTTCATGGAATGTCAATGGTTGCTTTATAAACAAAGAATATAATCAAATTGAAATGAGAACTATTAAGGCTTGAACTTAGGTCAGCATAAAGAGCTCTTTCAGATAGAACCAGAAGGTTAAACAGGAGGAAAAGATTGTGAAAGAGAATTGGGGGAATTGTGGGGTATTGATTAAGATTCAGAATCTGTGTG

mRNA sequence

ATGAAAAGGCAAGGGAATAAAAGAAAAACCACCATAAAATGGACCCCAAAGCTAAGAGAACTTGGCCAACTATATAAACCCCTCGTCCCCCCATCAAACAAATTCAACAAACTCTCACTTCTAACCAAATTTAAATTCAAATTCACCTATTACCCAACAAGAACCATTCATTATTCCATCCATTTTATTTTCTTCATCAAGAAGGGAATGAGTTGGTCAGCAGGAGATTGGATATGCAACGTTTGCCAGAACGTAAACTTTAAAAAAAGAGAAGCATGCCATCGATGTGGTTACCCCAAGTATGGAGGTCCAGACCCATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCCAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCGGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATTTGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTCACTTGGGTGTGTGATACAATTTTGGGTGCTCTATCTTTCAGGTGGTGCAGTGTAAAGCGGGAAGGAATTTTGGAAGGCTCTCCTTATGCGATATATCGTCTTCCTTGGCATCTAATCCCTATCCAAATGCTGCCTTTTTCTTTTTTTCTTTTTTTCTTTTTAAATGACTAACAACAATAATGTTAAGCCCTTAGAATGATCCTCAATTTAGATATCATGGGTGAAGGCCCATTTTTCCATTCAAGCATTGCAATATAGCTAGCTACTCTCTCTATCTCTCTCTCTAATCGGTGCGCAGAACGGGAACAAACATATCCGAATACTGAATTTGGATGGTCCTTCATGGAATGTCAATGGTTGCTTTATAAACAAAGAATATAATCAAATTGAAATGAGAACTATTAAGGCTTGAACTTAGGTCAGCATAAAGAGCTCTTTCAGATAGAACCAGAAGGTTAAACAGGAGGAAAAGATTGTGAAAGAGAATTGGGGGAATTGTGGGGTATTGATTAAGATTCAGAATCTGTGTG

Coding sequence (CDS)

ATGAAAAGGCAAGGGAATAAAAGAAAAACCACCATAAAATGGACCCCAAAGCTAAGAGAACTTGGCCAACTATATAAACCCCTCGTCCCCCCATCAAACAAATTCAACAAACTCTCACTTCTAACCAAATTTAAATTCAAATTCACCTATTACCCAACAAGAACCATTCATTATTCCATCCATTTTATTTTCTTCATCAAGAAGGGAATGAGTTGGTCAGCAGGAGATTGGATATGCAACGTTTGCCAGAACGTAAACTTTAAAAAAAGAGAAGCATGCCATCGATGTGGTTACCCCAAGTATGGAGGTCCAGACCCATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCCAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCGGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATTTGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTCACTTGGGTGTGTGA

Protein sequence

MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSIHFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV*

Homology

[Close]

BLAST of CsGy1G018640 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.1e-07
Identity = 34/130 (26.15%), Postives = 51/130 (39.23%), Query Frame = 0


Query: 75  GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYN-KTEALAGDWYCTTVSCGAHNY 134
           GDW C +C   NF++R +C RC +P       +T S     +   G+ Y    S    NY
Sbjct: 345 GDWNCPMCGFSNFQRRTSCFRCSFPGPTHVSAATGSNTFSPDFPYGNSYGNGSSHFIANY 404

Query: 135 ASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASR 194
               +       +S      G   +              +++GDW C   GCG HN+A  
Sbjct: 405 GGSVHHSNENTMQSDLQHQNGNNAVNHHHSSRSFGGNVPFRAGDWKCGSEGCGYHNFAKN 464

Query: 195 MECFKCKTPR 204
           + C +C   R
Sbjct: 465 VCCLRCGASR 474

[Close]

BLAST of CsGy1G018640 vs. ExPASy Swiss-Prot
Match: Q5ZLX5 (Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.4e-06
Identity = 34/89 (38.20%), Postives = 42/89 (47.19%), Query Frame = 0


Query: 119 GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WK 178
           GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + 
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNRCGREKTT-----EAKMMKAGGTEIGKTLAEKSRGLFS 70

Query: 179 SGDWICPRMGCGVHNYASRMECFKCKTPR 204
           + DW C    CG  N+A R EC  C TP+
Sbjct: 71  ANDWQCKT--CGNVNWARRSECNMCNTPK 92

[Close]

BLAST of CsGy1G018640 vs. ExPASy Swiss-Prot
Match: O95218 (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 3.7e-05
Identity = 33/89 (37.08%), Postives = 41/89 (46.07%), Query Frame = 0


Query: 119 GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WK 178
           GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + 
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNRCGREKTT-----EAKMMKAGGTEIGKTLAEKSRGLFS 70

Query: 179 SGDWICPRMGCGVHNYASRMECFKCKTPR 204
           + DW C    C   N+A R EC  C TP+
Sbjct: 71  ANDWQCKT--CSNVNWARRSECNMCNTPK 92

[Close]

BLAST of CsGy1G018640 vs. ExPASy Swiss-Prot
Match: Q9R020 (Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 3.7e-05
Identity = 33/89 (37.08%), Postives = 41/89 (46.07%), Query Frame = 0


Query: 119 GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WK 178
           GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + 
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNRCGREKTT-----EAKMMKAGGTEIGKTLAEKSRGLFS 70

Query: 179 SGDWICPRMGCGVHNYASRMECFKCKTPR 204
           + DW C    C   N+A R EC  C TP+
Sbjct: 71  ANDWQCKT--CSNVNWARRSECNMCNTPK 92

[Close]

BLAST of CsGy1G018640 vs. ExPASy Swiss-Prot
Match: Q19QU3 (Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.7e-05
Identity = 33/89 (37.08%), Postives = 41/89 (46.07%), Query Frame = 0


Query: 119 GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WK 178
           GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + 
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNRCGREKTT-----EAKMMKAGGTEIGKTLAEKSRGLFS 70

Query: 179 SGDWICPRMGCGVHNYASRMECFKCKTPR 204
           + DW C    C   N+A R EC  C TP+
Sbjct: 71  ANDWQCKT--CSNVNWARRSECNMCNTPK 92

[Close]

BLAST of CsGy1G018640 vs. NCBI nr
Match: XP_008465019.2 (PREDICTED: uncharacterized protein LOC103502740 isoform X1 [Cucumis melo])

HSP 1 Score: 470 bits (1210), Expect = 5.08e-168
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60
           MKRQGNKRKTT KWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI
Sbjct: 1   MKRQGNKRKTTTKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60

Query: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120
           HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD
Sbjct: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120

Query: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180
           WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC
Sbjct: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180

Query: 181 PRMGCGVHNYASRMECFKCKTPRDFGHLGV 210
           PRMGCGVHNYASRMECFKCKTPRDFGHLGV
Sbjct: 181 PRMGCGVHNYASRMECFKCKTPRDFGHLGV 210

[Close]

BLAST of CsGy1G018640 vs. NCBI nr
Match: KAE8653078.1 (hypothetical protein Csa_020050 [Cucumis sativus])

HSP 1 Score: 465 bits (1197), Expect = 4.71e-166
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60
           MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI
Sbjct: 1   MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60

Query: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120
           HFIFFIK GMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD
Sbjct: 61  HFIFFIK-GMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120

Query: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180
           WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC
Sbjct: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180

Query: 181 PRMGCGVHNYASRMECFKCKTPRDFGHLGV 210
           PRMGCGVHNYASRMECFKCKTPRDFGHLGV
Sbjct: 181 PRMGCGVHNYASRMECFKCKTPRDFGHLGV 209

[Close]

BLAST of CsGy1G018640 vs. NCBI nr
Match: XP_008465020.2 (PREDICTED: uncharacterized protein LOC103502740 isoform X3 [Cucumis melo])

HSP 1 Score: 463 bits (1192), Expect = 2.73e-165
Identity = 208/210 (99.05%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60
           MKRQGNKRKTT KWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI
Sbjct: 1   MKRQGNKRKTTTKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60

Query: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120
           HFIFFIK GMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD
Sbjct: 61  HFIFFIK-GMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120

Query: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180
           WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC
Sbjct: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180

Query: 181 PRMGCGVHNYASRMECFKCKTPRDFGHLGV 210
           PRMGCGVHNYASRMECFKCKTPRDFGHLGV
Sbjct: 181 PRMGCGVHNYASRMECFKCKTPRDFGHLGV 209

[Close]

BLAST of CsGy1G018640 vs. NCBI nr
Match: XP_008465021.2 (PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo])

HSP 1 Score: 461 bits (1186), Expect = 2.24e-164
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60
           MKRQGNKRKTT KWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI
Sbjct: 1   MKRQGNKRKTTTKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60

Query: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120
           HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD
Sbjct: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120

Query: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180
           WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC
Sbjct: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180

Query: 181 PRMGCGVHNYASRMECFKCKTPRDFG 206
           PRMGCGVHNYASRMECFKCKTPRDFG
Sbjct: 181 PRMGCGVHNYASRMECFKCKTPRDFG 206

[Close]

BLAST of CsGy1G018640 vs. NCBI nr
Match: XP_011656267.2 (zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus] >XP_011656275.1 zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 333 bits (853), Expect = 1.21e-114
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 70  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 129
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60

Query: 130 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 189
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120

Query: 190 YASRMECFKCKTPRDFGHLGV 210
           YASRMECFKCKTPRDFGHLGV
Sbjct: 121 YASRMECFKCKTPRDFGHLGV 141

[Close]

BLAST of CsGy1G018640 vs. ExPASy TrEMBL
Match: A0A1S3CNB1 (uncharacterized protein LOC103502740 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 470 bits (1210), Expect = 2.46e-168
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60
           MKRQGNKRKTT KWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI
Sbjct: 1   MKRQGNKRKTTTKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60

Query: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120
           HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD
Sbjct: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120

Query: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180
           WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC
Sbjct: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180

Query: 181 PRMGCGVHNYASRMECFKCKTPRDFGHLGV 210
           PRMGCGVHNYASRMECFKCKTPRDFGHLGV
Sbjct: 181 PRMGCGVHNYASRMECFKCKTPRDFGHLGV 210

[Close]

BLAST of CsGy1G018640 vs. ExPASy TrEMBL
Match: A0A1S3CPF6 (uncharacterized protein LOC103502740 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 463 bits (1192), Expect = 1.32e-165
Identity = 208/210 (99.05%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60
           MKRQGNKRKTT KWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI
Sbjct: 1   MKRQGNKRKTTTKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60

Query: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120
           HFIFFIK GMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD
Sbjct: 61  HFIFFIK-GMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120

Query: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180
           WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC
Sbjct: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180

Query: 181 PRMGCGVHNYASRMECFKCKTPRDFGHLGV 210
           PRMGCGVHNYASRMECFKCKTPRDFGHLGV
Sbjct: 181 PRMGCGVHNYASRMECFKCKTPRDFGHLGV 209

[Close]

BLAST of CsGy1G018640 vs. ExPASy TrEMBL
Match: A0A0A0LWE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G306810 PE=4 SV=1)

HSP 1 Score: 463 bits (1191), Expect = 1.88e-165
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60
           MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI
Sbjct: 1   MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60

Query: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120
           HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD
Sbjct: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120

Query: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180
           WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC
Sbjct: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180

Query: 181 PRMGCGVHNYASRMECFKCKTPRDFG 206
           PRMGCGVHNYASRMECFKCKTPRDFG
Sbjct: 181 PRMGCGVHNYASRMECFKCKTPRDFG 206

[Close]

BLAST of CsGy1G018640 vs. ExPASy TrEMBL
Match: A0A1S3CMY6 (uncharacterized protein LOC103502740 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 461 bits (1186), Expect = 1.09e-164
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MKRQGNKRKTTIKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60
           MKRQGNKRKTT KWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI
Sbjct: 1   MKRQGNKRKTTTKWTPKLRELGQLYKPLVPPSNKFNKLSLLTKFKFKFTYYPTRTIHYSI 60

Query: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120
           HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD
Sbjct: 61  HFIFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGD 120

Query: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180
           WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC
Sbjct: 121 WYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWIC 180

Query: 181 PRMGCGVHNYASRMECFKCKTPRDFG 206
           PRMGCGVHNYASRMECFKCKTPRDFG
Sbjct: 181 PRMGCGVHNYASRMECFKCKTPRDFG 206

[Close]

BLAST of CsGy1G018640 vs. ExPASy TrEMBL
Match: A0A5D3E0T0 (Zinc finger Ran-binding domain-containing protein 2-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00450 PE=4 SV=1)

HSP 1 Score: 323 bits (829), Expect = 2.59e-111
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 70  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 129
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60

Query: 130 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 189
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120

Query: 190 YASRMECFKCKTPRDFG 206
           YASRMECFKCKTPRDFG
Sbjct: 121 YASRMECFKCKTPRDFG 137

[Close]

BLAST of CsGy1G018640 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 219.2 bits (557), Expect = 3.2e-57
Identity = 90/139 (64.75%), Postives = 110/139 (79.14%), Query Frame = 0


Query: 70  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 129
           MSW+ GDW+C  CQ+ NFKKRE+C +CGYPK+GG D STY YN+TE +AGDWYC  ++CG
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEVMAGDWYCGALNCG 60

Query: 130 AHNYASRPNCFRCGAFKSVYPGD-YGAYMMGSDQYGSD-ASIPPGWKSGDWICPRMGCGV 189
           +HNYASR +C+RCG  K  Y    YGA M+    YG+D A+ PPGWK+GDW+CPR+GCGV
Sbjct: 61  SHNYASRTSCYRCGMIKVEYTEQYYGAQMVA---YGNDGAACPPGWKTGDWVCPRVGCGV 120

Query: 190 HNYASRMECFKCKTPRDFG 207
           HNYASR ECFKCKT RD+G
Sbjct: 121 HNYASRAECFKCKTTRDYG 136

[Close]

BLAST of CsGy1G018640 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 8.6e-34
Identity = 66/156 (42.31%), Postives = 88/156 (56.41%), Query Frame = 0


Query: 75  GDWICNVCQNVNFKKREACHRCG-------------YPKYGGPDPSTYSYNK-TEALAGD 134
           GDW C  C ++NF++R++C RCG             +  +GG   S + +   ++   GD
Sbjct: 5   GDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRPGD 64

Query: 135 WYCTTVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMMGSDQYGSD--ASIPPG----- 194
           WYCT  +CG HN+ASR  CF+CG FK     G  G  + G   + +D   S  PG     
Sbjct: 65  WYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRS 124

Query: 195 -WKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGH 208
            WKSGDWIC R+GC  HN+ASRMECF+C  PRDF +
Sbjct: 125 SWKSGDWICTRIGCNEHNFASRMECFRCNAPRDFSN 160

[Close]

BLAST of CsGy1G018640 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 5.2e-31
Identity = 59/159 (37.11%), Postives = 82/159 (51.57%), Query Frame = 0


Query: 75  GDWICNVCQNVNFKKREACHRCGYPKYGG------------PDPSTYSYNK-TEALAGDW 134
           GDW C +C ++NF++R++C RC  P+ GG            P  S++ +N   +   GDW
Sbjct: 5   GDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDW 64

Query: 135 YCTTVSCGAHNYASRPNCFRCGAFKSVYPGD----------------YGAYMMGSDQYGS 194
           YC    CG HN+A+R +CF+CGA K  +                    G +  G    G 
Sbjct: 65  YCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGG 124

Query: 195 DASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD 205
             +    WKSGDWICPR GC  HN+ASR ECF+C  P++
Sbjct: 125 GGTGRSPWKSGDWICPRSGCNEHNFASRSECFRCNAPKE 163

[Close]

BLAST of CsGy1G018640 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.9e-18
Identity = 53/149 (35.57%), Postives = 69/149 (46.31%), Query Frame = 0


Query: 75  GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYA 134
           GDW C  C+N N+  R  C+RC  P+    D +T   +K     GDW CT   C  +NYA
Sbjct: 7   GDWECLGCRNRNYAFRSFCNRCKQPRL-IMDNNTSPNSKWLPRIGDWICT--GCTNNNYA 66

Query: 135 SRPNCFRCGAFKSV-------YPG-----------------DYGAYMMGSDQYGSDASIP 194
           SR  C +CG  K V        PG                 D    ++      + AS+ 
Sbjct: 67  SREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPGSLLAFSNATNQASVH 126

Query: 195 PGWKSGDWICPRMGCGVHNYASRMECFKC 200
             W+SGDWIC    CG HNY+SR++C KC
Sbjct: 127 KEWRSGDWIC---RCGFHNYSSRIQCKKC 149

[Close]

BLAST of CsGy1G018640 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 4.2e-04
Identity = 23/83 (27.71%), Postives = 34/83 (40.96%), Query Frame = 0


Query: 75  GDWICNVCQNVNFKKREACHRCG-YPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNY 134
           GDW C  C+ +NF K   C RC  + +           +      GDW C T  C   N+
Sbjct: 236 GDWYCTECKFLNFAKNIRCLRCDVFSEERLKQLKEEQKDHLPLKKGDWICQT--CNFLNF 295

Query: 135 ASRPNCFRC---GAFKSVYPGDY 154
           +    C RC      + + PG++
Sbjct: 296 SKNTRCLRCKDKPTLRQINPGEW 316

The following BLAST results are available for this feature:

BLAST of CsGy1G018640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13801	5.1e-07	26.15	Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra...	[more]
Q5ZLX5	7.4e-06	38.20	Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=...	[more]
O95218	3.7e-05	37.08	Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=Z...	[more]
Q9R020	3.7e-05	37.08	Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=...	[more]
Q19QU3	3.7e-05	37.08	Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRA...	[more]

BLAST of CsGy1G018640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465019.2	5.08e-168	99.52	PREDICTED: uncharacterized protein LOC103502740 isoform X1 [Cucumis melo]	[more]
KAE8653078.1	4.71e-166	99.52	hypothetical protein Csa_020050 [Cucumis sativus]	[more]
XP_008465020.2	2.73e-165	99.05	PREDICTED: uncharacterized protein LOC103502740 isoform X3 [Cucumis melo]	[more]
XP_008465021.2	2.24e-164	99.51	PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo]	[more]
XP_011656267.2	1.21e-114	100.00	zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus]...	[more]

BLAST of CsGy1G018640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CNB1	2.46e-168	99.52	uncharacterized protein LOC103502740 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CPF6	1.32e-165	99.05	uncharacterized protein LOC103502740 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LWE1	1.88e-165	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G306810 PE=4 SV=1	[more]
A0A1S3CMY6	1.09e-164	99.51	uncharacterized protein LOC103502740 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3E0T0	2.59e-111	100.00	Zinc finger Ran-binding domain-containing protein 2-like isoform X3 OS=Cucumis m...	[more]

BLAST of CsGy1G018640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26695.1	3.2e-57	64.75	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	8.6e-34	42.31	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	5.2e-31	37.11	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G17975.1	3.9e-18	35.57	zinc finger (Ran-binding) family protein	[more]
AT1G70650.1	4.2e-04	27.71	Ran BP2/NZF zinc finger-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 119..145 e-value: 1.3E-4 score: 31.3 coord: 176..202 e-value: 2.7E-8 score: 43.6 coord: 75..99 e-value: 3.3E-6 score: 36.6
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 73..101 e-value: 5.2E-7 score: 28.9 coord: 174..203 e-value: 9.3E-9 score: 34.5 coord: 118..146 e-value: 1.3E-6 score: 27.6
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 121..142
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 178..199
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 77..96
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 117..148 score: 9.145193
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 174..205 score: 10.138906
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 73..102 score: 9.235531
None	No IPR available	GENE3D	4.10.1060.10		coord: 169..205 e-value: 4.2E-13 score: 50.3 coord: 66..104 e-value: 1.3E-11 score: 45.5 coord: 109..148 e-value: 1.3E-10 score: 42.3
None	No IPR available	PANTHER	PTHR23111:SF41	ZINC FINGER, RANBP2-TYPE-RELATED	coord: 35..207
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 35..207
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 68..103
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 170..205
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 115..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G018640.2	CsGy1G018640.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding