CsGy1G018465 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G018465
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr1: 16602187 .. 16602351 (-)
RNA-Seq Expression	CsGy1G018465
Synteny	CsGy1G018465

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATATTGAAAGTGAAGAAGATGAACAAGGAAAAGAAGATAAAGATGAAGAAGGACAAGGAAAGACCACACTAAATGAGGAATCCAATTCATCAACAAAAGAGACAAGTGACCAAAATGAGGGATCCATGAATAATAAAAAGAGTAAAGAAAAGGGAAAGAAA

mRNA sequence

GAAGATATTGAAAGTGAAGAAGATGAACAAGGAAAAGAAGATAAAGATGAAGAAGGACAAGGAAAGACCACACTAAATGAGGAATCCAATTCATCAACAAAAGAGACAAGTGACCAAAATGAGGGATCCATGAATAATAAAAAGAGTAAAGAAAAGGGAAAGAAA

Coding sequence (CDS)

GAAGATATTGAAAGTGAAGAAGATGAACAAGGAAAAGAAGATAAAGATGAAGAAGGACAAGGAAAGACCACACTAAATGAGGAATCCAATTCATCAACAAAAGAGACAAGTGACCAAAATGAGGGATCCATGAATAATAAAAAGAGTAAAGAAAAGGGAAAGAAA

Protein sequence

EDIESEEDEQGKEDKDEEGQGKTTLNEESNSSTKETSDQNEGSMNNKKSKEKGKK

Homology

[Close]

BLAST of CsGy1G018465 vs. NCBI nr
Match: KGN65290.1 (hypothetical protein Csa_019923 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 3.71e-21
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  EDIESEEDEQGKEDKDEEGQGKTTLNEESNSSTKETSDQNEGSMNNKKSKEKGKK 55
          EDIESEEDEQGKEDKDEEGQGKTTLNEESNSSTKETSDQNEGSMNNKKSKEKGKK
Sbjct: 20 EDIESEEDEQGKEDKDEEGQGKTTLNEESNSSTKETSDQNEGSMNNKKSKEKGKK 74

[Close]

BLAST of CsGy1G018465 vs. ExPASy TrEMBL
Match: A0A0A0LTN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G302170 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.79e-21
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  EDIESEEDEQGKEDKDEEGQGKTTLNEESNSSTKETSDQNEGSMNNKKSKEKGKK 55
          EDIESEEDEQGKEDKDEEGQGKTTLNEESNSSTKETSDQNEGSMNNKKSKEKGKK
Sbjct: 20 EDIESEEDEQGKEDKDEEGQGKTTLNEESNSSTKETSDQNEGSMNNKKSKEKGKK 74

The following BLAST results are available for this feature:

BLAST of CsGy1G018465 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G018465 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65290.1	3.71e-21	100.00	hypothetical protein Csa_019923 [Cucumis sativus]	[more]

BLAST of CsGy1G018465 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTN1	1.79e-21	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G302170 PE=4 SV=1	[more]

BLAST of CsGy1G018465 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G018465.1	CsGy1G018465.1	mRNA