CsGy1G017980 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G017980
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptioneukaryotic translation initiation factor
LocationGy14Chr1: 16090860 .. 16091655 (-)
RNA-Seq ExpressionCsGy1G017980
SyntenyCsGy1G017980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCCTGAGAAGATTGTCCACCACATTGTCCAGGTCTTTATTTAAAGCATATCGGTATTATTGCTAATGTTTCACCCCTCCATAATATTTTGTAAAATGCTCTGCAATTTCTGATATCGTGTGATGTATCAGGAACTTTTAGGACCAGATAACAAAACCTGTCCTGCCGAAGAAAATGTCGAGGCAATCTGTCAATTCTTTAACACCATAGGTAAGCAGCTAGACGAGAACACTAAATCGCGCCGTATTAATGACATGTACTTTGGCCGATTGAAAGAACTGACCACACACACTCAGTTGGCCCCACGATTGAAATTCATGCTCCGTGATGTTCTTGATTTGCGTGCTAACAATTGGGTTCCTAGGCGTGAGGAGGTAGACCCTCGATCTCCCACTCTCTTTTCTGATGGGTCCAACAGAATGTTAGATCTTTTGTTCTAATGCTTTCACCCTTTTCTTCCTACAGGTTAAAGCCAAAACTATAACTGAAATACATTCAGAGGCAGAAAAAAATCTGGGACTACGCCCTGGTGCTACTGTTACTATCAGAAATAGTCGTGTTACGTCTGGTTCTGCCGGCAACACTAGCCCTGGAGGCTTTCCTATCAATCGTCCTGGTTTTGGGGGCATGATGCCTGGGATGCCTGGAACAAGGAAGATGCCTGGTATGCCAGGTATGGATAATGACAATTGGGAGGTACCTAGGGCTCGTTCTATAACAAGGGGGCAGACGGATCTGGTATCCAGTATGCTGGACGTGGTCAACCGTTGGTTGGCAAAGCACCAACATTAA

mRNA sequence

ATGGTGCCTGAGAAGATTGTCCACCACATTGTCCAGGAACTTTTAGGACCAGATAACAAAACCTGTCCTGCCGAAGAAAATGTCGAGGCAATCTGTCAATTCTTTAACACCATAGGTAAGCAGCTAGACGAGAACACTAAATCGCGCCGTATTAATGACATTCGTGTTACGTCTGGTTCTGCCGGCAACACTAGCCCTGGAGGCTTTCCTATCAATCGTCCTGGTTTTGGGGGCATGATGCCTGGGATGCCTGGAACAAGGAAGATGCCTGGTATGCCAGGTATGGATAATGACAATTGGGAGGTACCTAGGGCTCGTTCTATAACAAGGGGGCAGACGGATCTGGTATCCAGTATGCTGGACGTGGTCAACCGTTGGTTGGCAAAGCACCAACATTAA

Coding sequence (CDS)

ATGGTGCCTGAGAAGATTGTCCACCACATTGTCCAGGAACTTTTAGGACCAGATAACAAAACCTGTCCTGCCGAAGAAAATGTCGAGGCAATCTGTCAATTCTTTAACACCATAGGTAAGCAGCTAGACGAGAACACTAAATCGCGCCGTATTAATGACATTCGTGTTACGTCTGGTTCTGCCGGCAACACTAGCCCTGGAGGCTTTCCTATCAATCGTCCTGGTTTTGGGGGCATGATGCCTGGGATGCCTGGAACAAGGAAGATGCCTGGTATGCCAGGTATGGATAATGACAATTGGGAGGTACCTAGGGCTCGTTCTATAACAAGGGGGCAGACGGATCTGGTATCCAGTATGCTGGACGTGGTCAACCGTTGGTTGGCAAAGCACCAACATTAA

Protein sequence

MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDIRVTSGSAGNTSPGGFPINRPGFGGMMPGMPGTRKMPGMPGMDNDNWEVPRARSITRGQTDLVSSMLDVVNRWLAKHQH*
Homology
[Close]
BLAST of CsGy1G017980 vs. ExPASy Swiss-Prot
Match: Q84PB3 (Eukaryotic translation initiation factor isoform 4G-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0499300 PE=2 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 2.5e-36
Identity = 92/188 (48.94%), Postives = 101/188 (53.72%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELL--GPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRIND----- 60
           MVPEKIVHHIVQELL  GPD K CP EENVEAICQFFNTIGKQLDEN KSRRIND     
Sbjct: 348 MVPEKIVHHIVQELLGSGPDKKACPEEENVEAICQFFNTIGKQLDENPKSRRINDTYFIQ 407

Query: 61  ---------------------------------------------------IRVTSGSAG 114
                                                              + +  G+ G
Sbjct: 408 MKELTTNLQLAPRLRFMVRDVVDLRSNNWVPRREEIKAKTISEIHDEAMKTLGLRPGATG 467

[Close]
BLAST of CsGy1G017980 vs. ExPASy Swiss-Prot
Match: Q03387 (Eukaryotic translation initiation factor isoform 4G-1 OS=Triticum aestivum OX=4565 PE=1 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-35
Identity = 86/178 (48.31%), Postives = 96/178 (53.93%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRIND------- 60
           MVPEKIVHHIV+ELLG D K CP EE+VEAICQFFNTIGKQLDEN KSRRIND       
Sbjct: 351 MVPEKIVHHIVKELLGSDKKACPDEEHVEAICQFFNTIGKQLDENPKSRRINDTYFVQIR 410

Query: 61  -------------------------------------------------IRVTSGSAGN- 112
                                                            + +  G+  N 
Sbjct: 411 ELVANPQLTPRSKFMVRDLIDLRSNNWVPRRAEIKAKTISEIHTEAEKNLGLRPGATANM 470

[Close]
BLAST of CsGy1G017980 vs. ExPASy Swiss-Prot
Match: Q41583 (Eukaryotic translation initiation factor isoform 4G-2 OS=Triticum aestivum OX=4565 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-35
Identity = 86/178 (48.31%), Postives = 96/178 (53.93%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRIND------- 60
           MVPEKIVHHIV+ELLG D K CP EE+VEAICQFFNTIGKQLDEN KSRRIND       
Sbjct: 350 MVPEKIVHHIVKELLGSDKKACPDEEHVEAICQFFNTIGKQLDENPKSRRINDTYFVHLR 409

Query: 61  -------------------------------------------------IRVTSGSAGN- 112
                                                            + +  G+  N 
Sbjct: 410 ELVANPQLTPRSKFMVRDLIDLRSNNWVPRRAEIKAKTISEIHTEAEKNLGLRPGATANM 469

[Close]
BLAST of CsGy1G017980 vs. ExPASy Swiss-Prot
Match: Q93ZT6 (Eukaryotic translation initiation factor isoform 4G-1 OS=Arabidopsis thaliana OX=3702 GN=EIF(ISO)4G1 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 7.6e-33
Identity = 83/178 (46.63%), Postives = 91/178 (51.12%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLG D K CPAEENVEAIC FF TIGKQLD N KS+RIND+      
Sbjct: 356 MVPEKIVHHIVQELLGADEKVCPAEENVEAICHFFKTIGKQLDGNVKSKRINDVYFKRLQ 415

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 416 ALSKNPQLELRLRFMVQNIIDMRSNGWVPRREEMKARTITEIHTEAEKNLGLRPGATANM 475

[Close]
BLAST of CsGy1G017980 vs. ExPASy Swiss-Prot
Match: Q6K641 (Eukaryotic translation initiation factor isoform 4G-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0611500 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.4e-32
Identity = 79/179 (44.13%), Postives = 90/179 (50.28%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLG ++  CPAEENVEAICQFFNTIGKQLDEN KSRR ND+      
Sbjct: 348 MVPEKIVHHIVQELLGSESNRCPAEENVEAICQFFNTIGKQLDENPKSRRFNDVYFNRLK 407

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 408 DLTTNSQLASRLRFMARDVLDLRSNQWVPRREEMKAKKISEIHREAENNLGLRPGSTASI 467

[Close]
BLAST of CsGy1G017980 vs. NCBI nr
Match: XP_004146671.1 (eukaryotic translation initiation factor [Cucumis sativus] >KGN65177.1 hypothetical protein Csa_019681 [Cucumis sativus])

HSP 1 Score: 200 bits (508), Expect = 4.22e-57
Identity = 110/180 (61.11%), Postives = 111/180 (61.67%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRIND+      
Sbjct: 359 MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLK 418

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 419 ELTTHTQLAPRLKFMLRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATVTI 478

[Close]
BLAST of CsGy1G017980 vs. NCBI nr
Match: XP_008443845.1 (PREDICTED: eukaryotic translation initiation factor [Cucumis melo] >KAA0035101.1 eukaryotic translation initiation factor [Cucumis melo var. makuwa])

HSP 1 Score: 198 bits (503), Expect = 2.18e-56
Identity = 109/180 (60.56%), Postives = 110/180 (61.11%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRIND+      
Sbjct: 360 MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLK 419

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 420 ELTTHTQLAPRLKFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATVNI 479

[Close]
BLAST of CsGy1G017980 vs. NCBI nr
Match: TYJ95977.1 (eukaryotic translation initiation factor [Cucumis melo var. makuwa])

HSP 1 Score: 198 bits (503), Expect = 2.18e-56
Identity = 109/180 (60.56%), Postives = 110/180 (61.11%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRIND+      
Sbjct: 360 MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLK 419

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 420 ELTTHTQLAPRLKFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATVNI 479

[Close]
BLAST of CsGy1G017980 vs. NCBI nr
Match: XP_038878795.1 (eukaryotic translation initiation factor-like [Benincasa hispida])

HSP 1 Score: 187 bits (474), Expect = 2.79e-52
Identity = 101/180 (56.11%), Postives = 105/180 (58.33%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLGPDNK CPAEENVEAICQFFNTIGKQLDENTKSRRIND+      
Sbjct: 360 MVPEKIVHHIVQELLGPDNKNCPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLK 419

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 420 ELTTHTQLAPRLKFMVRDVLDLRANNWVPRREEVKAKTINEIHSEAEKNLGLRPGATVNI 479

[Close]
BLAST of CsGy1G017980 vs. NCBI nr
Match: XP_022135487.1 (eukaryotic translation initiation factor [Momordica charantia])

HSP 1 Score: 186 bits (472), Expect = 5.03e-52
Identity = 103/181 (56.91%), Postives = 106/181 (58.56%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDIR----- 60
           MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDEN KSRRIND+      
Sbjct: 356 MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENAKSRRINDMYFGRLK 415

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 416 ELTTHPQLAPRLKFMVRNVLDLRANNWVPXXXXXXAKTITEIHSEAERNLGLRPGATVNI 475

[Close]
BLAST of CsGy1G017980 vs. ExPASy TrEMBL
Match: A0A0A0LWG6 (MI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257340 PE=4 SV=1)

HSP 1 Score: 200 bits (508), Expect = 2.04e-57
Identity = 110/180 (61.11%), Postives = 111/180 (61.67%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRIND+      
Sbjct: 359 MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLK 418

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 419 ELTTHTQLAPRLKFMLRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATVTI 478

[Close]
BLAST of CsGy1G017980 vs. ExPASy TrEMBL
Match: A0A5A7T0H9 (Eukaryotic translation initiation factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G001760 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 1.05e-56
Identity = 109/180 (60.56%), Postives = 110/180 (61.11%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRIND+      
Sbjct: 360 MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLK 419

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 420 ELTTHTQLAPRLKFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATVNI 479

[Close]
BLAST of CsGy1G017980 vs. ExPASy TrEMBL
Match: A0A5D3BA27 (Eukaryotic translation initiation factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00470 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 1.05e-56
Identity = 109/180 (60.56%), Postives = 110/180 (61.11%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRIND+      
Sbjct: 360 MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLK 419

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 420 ELTTHTQLAPRLKFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATVNI 479

[Close]
BLAST of CsGy1G017980 vs. ExPASy TrEMBL
Match: A0A1S3B918 (eukaryotic translation initiation factor OS=Cucumis melo OX=3656 GN=LOC103487340 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 1.05e-56
Identity = 109/180 (60.56%), Postives = 110/180 (61.11%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRIND+      
Sbjct: 360 MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLK 419

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 420 ELTTHTQLAPRLKFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATVNI 479

[Close]
BLAST of CsGy1G017980 vs. ExPASy TrEMBL
Match: A0A6J1C2U4 (eukaryotic translation initiation factor OS=Momordica charantia OX=3673 GN=LOC111007430 PE=4 SV=1)

HSP 1 Score: 186 bits (472), Expect = 2.44e-52
Identity = 103/181 (56.91%), Postives = 106/181 (58.56%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDIR----- 60
           MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDEN KSRRIND+      
Sbjct: 356 MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENAKSRRINDMYFGRLK 415

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 416 ELTTHPQLAPRLKFMVRNVLDLRANNWVPXXXXXXAKTITEIHSEAERNLGLRPGATVNI 475

[Close]
BLAST of CsGy1G017980 vs. TAIR 10
Match: AT5G57870.1 (MIF4G domain-containing protein / MA3 domain-containing protein )

HSP 1 Score: 141.4 bits (355), Expect = 5.4e-34
Identity = 83/178 (46.63%), Postives = 91/178 (51.12%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLG D K CPAEENVEAIC FF TIGKQLD N KS+RIND+      
Sbjct: 356 MVPEKIVHHIVQELLGADEKVCPAEENVEAICHFFKTIGKQLDGNVKSKRINDVYFKRLQ 415

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 416 ALSKNPQLELRLRFMVQNIIDMRSNGWVPRREEMKARTITEIHTEAEKNLGLRPGATANM 475

[Close]
BLAST of CsGy1G017980 vs. TAIR 10
Match: AT5G57870.2 (MIF4G domain-containing protein / MA3 domain-containing protein )

HSP 1 Score: 141.4 bits (355), Expect = 5.4e-34
Identity = 83/178 (46.63%), Postives = 91/178 (51.12%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLG D K CPAEENVEAIC FF TIGKQLD N KS+RIND+      
Sbjct: 352 MVPEKIVHHIVQELLGADEKVCPAEENVEAICHFFKTIGKQLDGNVKSKRINDVYFKRLQ 411

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 412 ALSKNPQLELRLRFMVQNIIDMRSNGWVPRREEMKARTITEIHTEAEKNLGLRPGATANM 471

[Close]
BLAST of CsGy1G017980 vs. TAIR 10
Match: AT2G24050.1 (MIF4G domain-containing protein / MA3 domain-containing protein )

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-23
Identity = 72/189 (38.10%), Postives = 81/189 (42.86%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI------ 60
           MVPEKIVHHIVQELLG D K CPAE +VEA+CQFF TIGKQLD++ +SR IND       
Sbjct: 315 MVPEKIVHHIVQELLGDDTKACPAEGDVEALCQFFITIGKQLDDSPRSRGINDTYFGRLK 374

Query: 61  ------------------------------------------------------------ 117
                                                                       
Sbjct: 375 ELARHPQLELRLRFMVQNVVDLRANKWVPRREEVKAKKINEIHSEAERNLGMRPGAMASM 434

[Close]
BLAST of CsGy1G017980 vs. TAIR 10
Match: AT1G62410.1 (MIF4G domain-containing protein )

HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0 

Query: 1   MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDENTKSRRINDI 55
           M+ EK+V  I Q+LL    + CP+EE + AIC F NT+GK+LD +  S+ +N+I
Sbjct: 117 MLTEKVVLAIGQKLLEDAEQMCPSEEKIIAICLFLNTVGKKLD-SLNSKLMNEI 169

[Close]
BLAST of CsGy1G017980 vs. TAIR 10
Match: AT3G60240.2 (eukaryotic translation initiation factor 4G )

HSP 1 Score: 45.4 bits (106), Expect = 4.0e-05
Identity = 21/45 (46.67%), Postives = 31/45 (68.89%), Query Frame = 0 

Query: 1    MVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDEN 46
            M+ EKI+H  +Q+LLG +    P EEN+EA+C+  +TIG  +D N
Sbjct: 1233 MLTEKIMHACIQKLLGYNQD--PHEENIEALCKLMSTIGVMIDHN 1275

The following BLAST results are available for this feature:
BLAST of CsGy1G017980 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84PB32.5e-3648.94Eukaryotic translation initiation factor isoform 4G-1 OS=Oryza sativa subsp. jap... [more]
Q033871.6e-3548.31Eukaryotic translation initiation factor isoform 4G-1 OS=Triticum aestivum OX=45... [more]
Q415831.6e-3548.31Eukaryotic translation initiation factor isoform 4G-2 OS=Triticum aestivum OX=45... [more]
Q93ZT67.6e-3346.63Eukaryotic translation initiation factor isoform 4G-1 OS=Arabidopsis thaliana OX... [more]
Q6K6416.4e-3244.13Eukaryotic translation initiation factor isoform 4G-2 OS=Oryza sativa subsp. jap... [more]
BLAST of CsGy1G017980 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146671.14.22e-5761.11eukaryotic translation initiation factor [Cucumis sativus] >KGN65177.1 hypotheti... [more]
XP_008443845.12.18e-5660.56PREDICTED: eukaryotic translation initiation factor [Cucumis melo] >KAA0035101.1... [more]
TYJ95977.12.18e-5660.56eukaryotic translation initiation factor [Cucumis melo var. makuwa][more]
XP_038878795.12.79e-5256.11eukaryotic translation initiation factor-like [Benincasa hispida][more]
XP_022135487.15.03e-5256.91eukaryotic translation initiation factor [Momordica charantia][more]
BLAST of CsGy1G017980 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWG62.04e-5761.11MI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257340 PE=4 SV=... [more]
A0A5A7T0H91.05e-5660.56Eukaryotic translation initiation factor OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3BA271.05e-5660.56Eukaryotic translation initiation factor OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3B9181.05e-5660.56eukaryotic translation initiation factor OS=Cucumis melo OX=3656 GN=LOC103487340... [more]
A0A6J1C2U42.44e-5256.91eukaryotic translation initiation factor OS=Momordica charantia OX=3673 GN=LOC11... [more]
BLAST of CsGy1G017980 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G57870.15.4e-3446.63MIF4G domain-containing protein / MA3 domain-containing protein [more]
AT5G57870.25.4e-3446.63MIF4G domain-containing protein / MA3 domain-containing protein [more]
AT2G24050.12.5e-2338.10MIF4G domain-containing protein / MA3 domain-containing protein [more]
AT1G62410.11.6e-0646.30MIF4G domain-containing protein [more]
AT3G60240.24.0e-0546.67eukaryotic translation initiation factor 4G [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003890MIF4G-like, type 3PFAMPF02854MIF4Gcoord: 1..53
e-value: 4.1E-10
score: 39.6
IPR016021MIF4G-like domain superfamilyGENE3D1.25.40.180coord: 1..65
e-value: 7.4E-11
score: 43.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..99
NoneNo IPR availablePANTHERPTHR23253:SF62MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2coord: 1..55
NoneNo IPR availablePANTHERPTHR23253:SF62MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2coord: 58..114
NoneNo IPR availablePANTHERPTHR23253EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMAcoord: 1..55
NoneNo IPR availablePANTHERPTHR23253EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMAcoord: 58..114
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G017980.2CsGy1G017980.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding