CsGy1G017760 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G017760
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr1: 15925629 .. 15926020 (-)
RNA-Seq Expression	CsGy1G017760
Synteny	CsGy1G017760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTCAAAACTGGGAATGGCAGGATCAACCGCCATGATTCTGACACCTCCTCATCCTCGAGATCTATTGCTAACCGTCCGATTATTTCTTCAGTATCTGAGGAGAAAAATGTAATTTCGAAATCTCTCTCTCCCCCCCGCTATAAAATGGGCAAGAAGATGCAGAGAATCAAAGGGACGAAGAGCGAACCTCCGCCGGTGATTGGTGCTCTTTGAAGAAACCCTAGAAAAGAGAAACTTCATTTGGCTGTGAGATTTGAGAGGAGGCTCTCTCTTAGGGAATGCAGAGAGATGAGAGGAGATTGGTTTACAAGTTTCATCTCTAGTGGTCGAGCTGGCAACTCCATCGGGGGCCGGAACTGTCATCGGAAACACGTTGAAGACGGGTGA

mRNA sequence

ATGACGTCAAAACTGGGAATGGCAGGATCAACCGCCATGATTCTGACACCTCCTCATCCTCGAGATCTATTGCTAACCGTCCGATTATTTCTTCAGTATCTGAGGAGAAAAATAAACCCTAGAAAAGAGAAACTTCATTTGGCTGTGAGATTTGAGAGGAGGCTCTCTCTTAGGGAATGCAGAGAGATGAGAGGAGATTGGTTTACAAGTTTCATCTCTAGTGGTCGAGCTGGCAACTCCATCGGGGGCCGGAACTGTCATCGGAAACACGTTGAAGACGGGTGA

Coding sequence (CDS)

ATGACGTCAAAACTGGGAATGGCAGGATCAACCGCCATGATTCTGACACCTCCTCATCCTCGAGATCTATTGCTAACCGTCCGATTATTTCTTCAGTATCTGAGGAGAAAAATAAACCCTAGAAAAGAGAAACTTCATTTGGCTGTGAGATTTGAGAGGAGGCTCTCTCTTAGGGAATGCAGAGAGATGAGAGGAGATTGGTTTACAAGTTTCATCTCTAGTGGTCGAGCTGGCAACTCCATCGGGGGCCGGAACTGTCATCGGAAACACGTTGAAGACGGGTGA

Protein sequence

MTSKLGMAGSTAMILTPPHPRDLLLTVRLFLQYLRRKINPRKEKLHLAVRFERRLSLRECREMRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG*

Homology

[Close]

BLAST of CsGy1G017760 vs. NCBI nr
Match: KGN65247.1 (hypothetical protein Csa_019669 [Cucumis sativus])

HSP 1 Score: 183 bits (464), Expect = 5.01e-58
Identity = 92/94 (97.87%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 1  MTSKLGMAGSTAMILTPPHPRDLLLTVRLFLQYLRRKINPRKEKLHLAVRFERRLSLREC 60
          MTSKLGMAGSTAMILTP HPRDLLLTVRLFLQYLRRKINPRKEKL LAVRFERRLSLREC
Sbjct: 1  MTSKLGMAGSTAMILTPSHPRDLLLTVRLFLQYLRRKINPRKEKLQLAVRFERRLSLREC 60

Query: 61 REMRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG 94
          REMRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG
Sbjct: 61 REMRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG 94

[Close]

BLAST of CsGy1G017760 vs. NCBI nr
Match: KAA0035063.1 (hypothetical protein E6C27_scaffold57G001200 [Cucumis melo var. makuwa])

HSP 1 Score: 53.9 bits (128), Expect = 5.63e-07
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 1  MTSKLGMAGSTAMILTPPHPRDLLLTVRLF 30
          MTSKL MAGSTAMILTPPHP DLL TVRLF
Sbjct: 1  MTSKLAMAGSTAMILTPPHPPDLLPTVRLF 30

[Close]

BLAST of CsGy1G017760 vs. NCBI nr
Match: KAF7838156.1 (CBL-interacting serine/threonine-protein kinase 6 [Senna tora])

HSP 1 Score: 50.1 bits (118), Expect = 1.57e-05
Identity = 24/37 (64.86%), Postives = 24/37 (64.86%), Query Frame = 0


Query: 58 RECREMRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG 94
          RECREMRG   T     G     IGGRNCHRKHVEDG
Sbjct: 46 RECREMRGPALTRTEIGGPTKRKIGGRNCHRKHVEDG 82

[Close]

BLAST of CsGy1G017760 vs. NCBI nr
Match: CAB4110217.1 (unnamed protein product [Lactuca saligna])

HSP 1 Score: 50.8 bits (120), Expect = 9.72e-05
Identity = 25/38 (65.79%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 57 LRECREMRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG 94
          LRECREMRGD  +   + GR   S GGR CHRKHVEDG
Sbjct: 41 LRECREMRGD--SRLSNRGRVKKSTGGRTCHRKHVEDG 76

[Close]

BLAST of CsGy1G017760 vs. NCBI nr
Match: MBA0574289.1 (hypothetical protein [Gossypium lobatum] >MBA0603321.1 hypothetical protein [Gossypium raimondii] >MBA0633009.1 hypothetical protein [Gossypium davidsonii] >MBA0752492.1 hypothetical protein [Gossypium gossypioides] >MBA0844188.1 hypothetical protein [Gossypium armourianum])

HSP 1 Score: 46.6 bits (109), Expect = 1.23e-04
Identity = 21/32 (65.62%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 63 MRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG 94
          MRG W T+    G    SIGGRNCHRKHVEDG
Sbjct: 1  MRGAWLTTPELCGHGKRSIGGRNCHRKHVEDG 32

[Close]

BLAST of CsGy1G017760 vs. ExPASy TrEMBL
Match: A0A0A0LWM6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269890 PE=4 SV=1)

HSP 1 Score: 183 bits (464), Expect = 2.42e-58
Identity = 92/94 (97.87%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 1  MTSKLGMAGSTAMILTPPHPRDLLLTVRLFLQYLRRKINPRKEKLHLAVRFERRLSLREC 60
          MTSKLGMAGSTAMILTP HPRDLLLTVRLFLQYLRRKINPRKEKL LAVRFERRLSLREC
Sbjct: 1  MTSKLGMAGSTAMILTPSHPRDLLLTVRLFLQYLRRKINPRKEKLQLAVRFERRLSLREC 60

Query: 61 REMRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG 94
          REMRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG
Sbjct: 61 REMRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG 94

[Close]

BLAST of CsGy1G017760 vs. ExPASy TrEMBL
Match: A0A5A7SWZ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G001200 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.73e-07
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 1  MTSKLGMAGSTAMILTPPHPRDLLLTVRLF 30
          MTSKL MAGSTAMILTPPHP DLL TVRLF
Sbjct: 1  MTSKLAMAGSTAMILTPPHPPDLLPTVRLF 30

[Close]

BLAST of CsGy1G017760 vs. ExPASy TrEMBL
Match: A0A6S7P723 (Non-specific serine/threonine protein kinase OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS37083 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 4.71e-05
Identity = 25/38 (65.79%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 57 LRECREMRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG 94
          LRECREMRGD  +   + GR   S GGR CHRKHVEDG
Sbjct: 41 LRECREMRGD--SRLSNRGRVKKSTGGRTCHRKHVEDG 76

[Close]

BLAST of CsGy1G017760 vs. ExPASy TrEMBL
Match: A0A7J9CVN3 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_001323 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.97e-05
Identity = 21/32 (65.62%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 63 MRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG 94
          MRG W T+    G    SIGGRNCHRKHVEDG
Sbjct: 1  MRGAWLTTPELCGHGKRSIGGRNCHRKHVEDG 32

[Close]

BLAST of CsGy1G017760 vs. ExPASy TrEMBL
Match: A0A7J9KCM0 (Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_001304 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.97e-05
Identity = 21/32 (65.62%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 63 MRGDWFTSFISSGRAGNSIGGRNCHRKHVEDG 94
          MRG W T+    G    SIGGRNCHRKHVEDG
Sbjct: 1  MRGAWLTTPELCGHGKRSIGGRNCHRKHVEDG 32

The following BLAST results are available for this feature:

BLAST of CsGy1G017760 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G017760 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65247.1	5.01e-58	97.87	hypothetical protein Csa_019669 [Cucumis sativus]	[more]
KAA0035063.1	5.63e-07	90.00	hypothetical protein E6C27_scaffold57G001200 [Cucumis melo var. makuwa]	[more]
KAF7838156.1	1.57e-05	64.86	CBL-interacting serine/threonine-protein kinase 6 [Senna tora]	[more]
CAB4110217.1	9.72e-05	65.79	unnamed protein product [Lactuca saligna]	[more]
MBA0574289.1	1.23e-04	65.63	hypothetical protein [Gossypium lobatum] >MBA0603321.1 hypothetical protein [Gos...	[more]

BLAST of CsGy1G017760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWM6	2.42e-58	97.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269890 PE=4 SV=1	[more]
A0A5A7SWZ1	2.73e-07	90.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6S7P723	4.71e-05	65.79	Non-specific serine/threonine protein kinase OS=Lactuca saligna OX=75948 GN=LSAL...	[more]
A0A7J9CVN3	5.97e-05	65.63	Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_001323 PE=4 ...	[more]
A0A7J9KCM0	5.97e-05	65.63	Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_001304 PE=4 S...	[more]

BLAST of CsGy1G017760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G017760.2	CsGy1G017760.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0004672	protein kinase activity