CsGy1G016970 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G016970
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Auxin-responsive protein
Location	Gy14Chr1: 14641342 .. 14642673 (-)
RNA-Seq Expression	CsGy1G016970
Synteny	CsGy1G016970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTCTTTGTCCCACACCCGCACGCACAACCCCTCTTCTCCTTTTAAACCCACATCCTCTTTCCAATTTCCATAATTCAAATTCATCTTTTGTTCTCACATTTTCTTCAATCAATCTCTTCCCCTACCTAATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTTGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCCCTGCGACATTTCGTCAAACACTTCCTCTGCTTCTTTGGAATGACCATCCCAATGATGGCGATGACGATGACCCTAATGACCCCCATTCTGCCTCCTCTAATGATTCGTATGCCACTATCTCTTACTTTTTCTGTCTTTGATTTGGAGTTTTGATTTGATTTGGGCTGAATTTTTTTGGTTTGGTTGATTGAACAGAGACGAGGAGGAGGAAGAGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGAGCGGTGATCCGCCGTCCAGCGGTGAAGAACGACGGCGTGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAAGATGTTTGGTGAGCTTGTGTTTGAAACATACATGCATCTAATGATCACTCAAACATTAACCCACTGTTTAATGTTACAACTTCAAAACACATTTCAAGCGATTTTCAAATTGTGTCTGTTAACAGATGAAACGAATTCGGAGGGTTACAAACTCACTTTCCAGAATACCAAGGGTGAATGGTTACTTGCTGAGAACGTAACTTGGAGGTAAAGATAAAAAAGATGTCTGACATTTTGATCCACAATGGACATTATTATAAAAGTTAAAATGGGGGTTTTGATGATATGGACAGGAATTTCATCGGAACTGTTCAACGGATCAATCTGGAAAAGAAGTCCGGGTGATGAGTGATGAGTGATGAGGGTTTACCGGCGGTGGGTTGTCAGAGAATCGGATGCTGTCTAATTAAAATATATCTCTTATGTTTTTTTGTTTTAAAATAGCAGTTTTTTAAGTTTGAATGACTGTATATGTAATGATATATTGAGAAAACTTAAACTTTAGATTATCTTTTTGACCTTATTTGTTTTTTTGTTGGGTAATACATGTTTAGGGATCTTAAATATATTAATTAATAAAAATAAAATATTATTACAA

mRNA sequence

CATTCTTTGTCCCACACCCGCACGCACAACCCCTCTTCTCCTTTTAAACCCACATCCTCTTTCCAATTTCCATAATTCAAATTCATCTTTTGTTCTCACATTTTCTTCAATCAATCTCTTCCCCTACCTAATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTTGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCCCTGCGACATTTCGTCAAACACTTCCTCTGCTTCTTTGGAATGACCATCCCAATGATGGCGATGACGATGACCCTAATGACCCCCATTCTGCCTCCTCTAATGATTCAGACGAGGAGGAGGAAGAGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGAGCGGTGATCCGCCGTCCAGCGGTGAAGAACGACGGCGTGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAAGATGTTTGGTGAGCTTGTGTTTGAAACATACATGCATCTAATGATCACTCAAACATTAACCCACTGTTTAATGTTACAACTTCAAAACACATTTCAAGCGATTTTCAAATTGTGTCTGTTAACAGATGAAACGAATTCGGAGGGTTACAAACTCACTTTCCAGAATACCAAGGGTGAATGGTTACTTGCTGAGAACGTAACTTGGAGGAATTTCATCGGAACTGTTCAACGGATCAATCTGGAAAAGAAGTCCGGGTGATGAGTGATGAGTGATGAGGGTTTACCGGCGGTGGGTTGTCAGAGAATCGGATGCTGTCTAATTAAAATATATCTCTTATGTTTTTTTGTTTTAAAATAGCAGTTTTTTAAGTTTGAATGACTGTATATGTAATGATATATTGAGAAAACTTAAACTTTAGATTATCTTTTTGACCTTATTTGTTTTTTTGTTGGGTAATACATGTTTAGGGATCTTAAATATATTAATTAATAAAAATAAAATATTATTACAA

Coding sequence (CDS)

ATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTTGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCCCTGCGACATTTCGTCAAACACTTCCTCTGCTTCTTTGGAATGACCATCCCAATGATGGCGATGACGATGACCCTAATGACCCCCATTCTGCCTCCTCTAATGATTCAGACGAGGAGGAGGAAGAGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGAGCGGTGATCCGCCGTCCAGCGGTGAAGAACGACGGCGTGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAAGATGTTTGGTGAGCTTGTGTTTGAAACATACATGCATCTAATGATCACTCAAACATTAACCCACTGTTTAATGTTACAACTTCAAAACACATTTCAAGCGATTTTCAAATTGTGTCTGTTAACAGATGAAACGAATTCGGAGGGTTACAAACTCACTTTCCAGAATACCAAGGGTGAATGGTTACTTGCTGAGAACGTAACTTGGAGGAATTTCATCGGAACTGTTCAACGGATCAATCTGGAAAAGAAGTCCGGGTGA

Protein sequence

MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLLWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELVFETYMHLMITQTLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG*

Homology

[Close]

BLAST of CsGy1G016970 vs. ExPASy Swiss-Prot
Match: Q93WC4 (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 2.6e-13
Identity = 79/286 (27.62%), Postives = 115/286 (40.21%), Query Frame = 0


Query: 3   MELQLGLALIPTNPIK---PFDLNTHNNNPISLVFDSINHKKRSRHLDSPATF------- 62
           MEL LGL+L P    K    FDLN H         +       +  L   ATF       
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKH------CAIEGAASCLGTEKLRFEATFGLGNVEE 60

Query: 63  ---RQTLPLLLWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFM 122
                   L   N  PN+ D+    DP  + S+   ++EEE + +VGWPP+    K+  +
Sbjct: 61  NCYMPKQRLFALNGQPNEEDE----DPLESESSIVYDDEEENSEVVGWPPV----KTCMI 120

Query: 123 KEGV-----------------GRRAVIRRPAVKNDGVFWRG------LDLNNSRYVKVKM 182
           K G                  GRR       + N      G      +   +S YVKVKM
Sbjct: 121 KYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKM 180

Query: 183 EGVGIARKVDLREHHSFDALRATLMKMFGELVFETYMHLMITQTLTHCLMLQLQNTFQAI 242
           +GV IARKVD++  +S+++L  +L+ MF E                              
Sbjct: 181 DGVAIARKVDIKLFNSYESLTNSLITMFTE------------------------------ 238

Query: 243 FKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINL 253
           ++ C    +     Y  TFQ  +G+WLL  +VTW+ F  +V RI++
Sbjct: 241 YEDC----DREDTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISI 238

[Close]

BLAST of CsGy1G016970 vs. ExPASy Swiss-Prot
Match: Q38829 (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.2e-11
Identity = 49/173 (28.32%), Postives = 79/173 (45.66%), Query Frame = 0


Query: 94  LVGWPPLKKRRKSLFMKEGVGR-----RAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEG 153
           +VGWPP++  R +  + +            I +   KN         + NS +VKV M+G
Sbjct: 89  VVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRS---DSTKMRNSMFVKVTMDG 148

Query: 154 VGIARKVDLREHHSFDALRATLMKMF-----GELVFETYMHLMITQTLTHCLMLQLQNTF 213
           + I RK+DL  H  +++L  TL +MF     G    ET  H+                  
Sbjct: 149 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMET---------------- 208

Query: 214 QAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKS 257
                + +L D   S G  LT+++ +G+W+L  +V W  FIG+V+R+ + K S
Sbjct: 209 ----PVKILPD--GSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]

BLAST of CsGy1G016970 vs. ExPASy Swiss-Prot
Match: Q38830 (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.5e-11
Identity = 54/183 (29.51%), Postives = 85/183 (46.45%), Query Frame = 0


Query: 80  SSNDSDEEEEEENGLVGWPPLKKRR----------KSLFMKEGVGRRAVIRRPAVKNDGV 139
           SS+         + +VGWPP+   R          K+   +EG G + V++   +K D  
Sbjct: 56  SSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELK-DVS 115

Query: 140 FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELVFETYMHLMITQ 199
                 +    +VKV M+GVGI RKVD+R H S++ L  TL +MF               
Sbjct: 116 MKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMF------------FGM 175

Query: 200 TLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQR 253
           T T C         + +  L LL     S  + LT+++ +G+W+L  +V WR FI +V+R
Sbjct: 176 TGTTCR--------EKVKPLRLL---DGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKR 214

[Close]

BLAST of CsGy1G016970 vs. ExPASy Swiss-Prot
Match: Q38828 (Auxin-responsive protein IAA10 OS=Arabidopsis thaliana OX=3702 GN=IAA10 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-09
Identity = 58/194 (29.90%), Postives = 88/194 (45.36%), Query Frame = 0


Query: 78  SASSNDSDEEEEEENGLVGWPPLKKRR--------KSLFMKEGVG-------RRAVIRRP 137
           SA S+ +          VGWPPL+  R        KSL  + G+         ++V+   
Sbjct: 78  SADSSPAAASNATRQVAVGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVV--V 137

Query: 138 AVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELVFETY 197
           A KND   +       S  VKV M+GV I RKVDL    S+ AL  TL  MF ++     
Sbjct: 138 AAKNDDACFI-KSSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSP-- 197

Query: 198 MHLMITQTLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTWRN 257
               +T++ T          ++ I + C       S  Y +T+Q+  G+W+L  +V W+ 
Sbjct: 198 ----VTRSNT--------QGYKTIKETCTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQM 254

[Close]

BLAST of CsGy1G016970 vs. ExPASy Swiss-Prot
Match: A2XLV9 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.7e-09
Identity = 48/187 (25.67%), Postives = 83/187 (44.39%), Query Frame = 0


Query: 76  PHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRR------AVIRRPAVKNDGV 135
           P  A++ D+++    +   VGWPP++  R+++   + V  +         ++PA    G 
Sbjct: 69  PAEAAAADAEKPPAPKAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASG- 128

Query: 136 FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELVFETYMHLMITQ 195
                  N+S +VKV M+G    RKVDL+ ++S+  L   L KMFG            T 
Sbjct: 129 ------SNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFG------------TF 188

Query: 196 TLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQR 255
           T T   M                 +E N      T+++  G+W+L  +V W+ F+ + +R
Sbjct: 189 TATGNNM-----------------NEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKR 219

Query: 256 INLEKKS 257
           + + K S
Sbjct: 249 LRIMKGS 219

[Close]

BLAST of CsGy1G016970 vs. NCBI nr
Match: XP_004150206.2 (auxin-responsive protein IAA29 [Cucumis sativus])

HSP 1 Score: 424 bits (1091), Expect = 6.36e-149
Identity = 218/257 (84.82%), Postives = 218/257 (84.82%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60

Query: 61  WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 120
           WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR
Sbjct: 61  WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 120

Query: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELVFE 180
           RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMF      
Sbjct: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMF------ 180

Query: 181 TYMHLMITQTLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTW 240
                                            DETNSEGYKLTFQNTKGEWLLAENVTW
Sbjct: 181 ---------------------------------DETNSEGYKLTFQNTKGEWLLAENVTW 218

Query: 241 RNFIGTVQRINLEKKSG 257
           RNFIGTVQRINLEKKSG
Sbjct: 241 RNFIGTVQRINLEKKSG 218

[Close]

BLAST of CsGy1G016970 vs. NCBI nr
Match: KGN65132.1 (hypothetical protein Csa_023489 [Cucumis sativus])

HSP 1 Score: 424 bits (1091), Expect = 1.20e-147
Identity = 218/257 (84.82%), Postives = 218/257 (84.82%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL
Sbjct: 83  MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 142

Query: 61  WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 120
           WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR
Sbjct: 143 WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 202

Query: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELVFE 180
           RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMF      
Sbjct: 203 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMF------ 262

Query: 181 TYMHLMITQTLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTW 240
                                            DETNSEGYKLTFQNTKGEWLLAENVTW
Sbjct: 263 ---------------------------------DETNSEGYKLTFQNTKGEWLLAENVTW 300

Query: 241 RNFIGTVQRINLEKKSG 257
           RNFIGTVQRINLEKKSG
Sbjct: 323 RNFIGTVQRINLEKKSG 300

[Close]

BLAST of CsGy1G016970 vs. NCBI nr
Match: XP_008443966.1 (PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo])

HSP 1 Score: 385 bits (990), Expect = 1.67e-133
Identity = 206/259 (79.54%), Postives = 207/259 (79.92%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATF-RQTLPLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDS  TF R TLPLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60

Query: 61  LWNDHPNDGDDDDPNDPHSASSNDSDEEEEE-ENGLVGWPPLKKRRKSLFMKEGVGRRAV 120
           LWNDHPNDGD DD NDP SASSNDSDEEEEE ENGLVGWPPLKKRRKSLFMKEGVGRRAV
Sbjct: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120

Query: 121 IRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELV 180
           IRRPAVKNDG FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLM MF    
Sbjct: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMF---- 180

Query: 181 FETYMHLMITQTLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENV 240
                                              DETNSEGY+LTFQNT GEWLLAENV
Sbjct: 181 -----------------------------------DETNSEGYRLTFQNTNGEWLLAENV 220

Query: 241 TWRNFIGTVQRINLEKKSG 257
           TWRNFIG VQRI LEKKSG
Sbjct: 241 TWRNFIGDVQRIKLEKKSG 220

[Close]

BLAST of CsGy1G016970 vs. NCBI nr
Match: XP_038879327.1 (auxin-responsive protein IAA29-like [Benincasa hispida])

HSP 1 Score: 334 bits (856), Expect = 4.36e-113
Identity = 177/260 (68.08%), Postives = 192/260 (73.85%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNP---ISLVFDSINHKKRSRHLDSPATFRQTLP 60
           MAMELQLGLAL PTNPIKPFDLNTH+NNP   +   FDSI HKKRSR  +  A FR+TLP
Sbjct: 1   MAMELQLGLALTPTNPIKPFDLNTHHNNPHNPLCFDFDSITHKKRSRDFNHSAAFRRTLP 60

Query: 61  LLLWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRA 120
           LLLWNDHPNDGDDDD NDPHSASSNDSDEEEE ENGLVGWPPLKKRRKSLFMK+ VGR A
Sbjct: 61  LLLWNDHPNDGDDDDSNDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMKKHVGRAA 120

Query: 121 VIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGEL 180
           VIRRP V+N G F+RGL+ N SRYVKVKMEGVGIARKVDL +HHSFDALRATLM MF   
Sbjct: 121 VIRRPMVENGGGFYRGLNSNYSRYVKVKMEGVGIARKVDLSQHHSFDALRATLMNMF--- 180

Query: 181 VFETYMHLMITQTLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAEN 240
                                               DET+S+ Y+LT+QN  G+WLLAEN
Sbjct: 181 ------------------------------------DETDSDDYRLTYQNIDGDWLLAEN 221

Query: 241 VTWRNFIGTVQRINLEKKSG 257
           VTWRNFIG VQR+ LEKKSG
Sbjct: 241 VTWRNFIGIVQRMKLEKKSG 221

[Close]

BLAST of CsGy1G016970 vs. NCBI nr
Match: KAG7023504.1 (Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272 bits (695), Expect = 1.14e-88
Identity = 146/257 (56.81%), Postives = 173/257 (67.32%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60
           MAMELQL L L PTNP KPFDLNTH+     L FDSI+ KKR   +D  + FR+TLPLLL
Sbjct: 1   MAMELQLSLGLFPTNPTKPFDLNTHHRALPCLDFDSISRKKRPLDIDPSSAFRRTLPLLL 60

Query: 61  WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 120
           WNDHPN+GDDD P +P+SASSN  D  EE+E  LVGWPPLKKRRK+LF+++ +GR   IR
Sbjct: 61  WNDHPNNGDDD-PKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAIR 120

Query: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELVFE 180
           RPA +NDG  +R L+ NNSRYVKVKMEGVGI RKVD+R+HH  DALRATLM MF      
Sbjct: 121 RPAAENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMF------ 180

Query: 181 TYMHLMITQTLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTW 240
                                            D+ +S+GY LT+Q+T G+WLLAE+VTW
Sbjct: 181 ---------------------------------DKPDSDGYNLTYQDTDGDWLLAEDVTW 217

Query: 241 RNFIGTVQRINLEKKSG 257
           R+FI TVQRI LEK  G
Sbjct: 241 RDFIRTVQRIKLEKNGG 217

[Close]

BLAST of CsGy1G016970 vs. ExPASy TrEMBL
Match: A0A0A0LWC5 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G231530 PE=3 SV=1)

HSP 1 Score: 424 bits (1091), Expect = 5.83e-148
Identity = 218/257 (84.82%), Postives = 218/257 (84.82%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL
Sbjct: 83  MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 142

Query: 61  WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 120
           WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR
Sbjct: 143 WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 202

Query: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELVFE 180
           RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMF      
Sbjct: 203 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMF------ 262

Query: 181 TYMHLMITQTLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTW 240
                                            DETNSEGYKLTFQNTKGEWLLAENVTW
Sbjct: 263 ---------------------------------DETNSEGYKLTFQNTKGEWLLAENVTW 300

Query: 241 RNFIGTVQRINLEKKSG 257
           RNFIGTVQRINLEKKSG
Sbjct: 323 RNFIGTVQRINLEKKSG 300

[Close]

BLAST of CsGy1G016970 vs. ExPASy TrEMBL
Match: A0A1S3B8T8 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103487427 PE=3 SV=1)

HSP 1 Score: 385 bits (990), Expect = 8.09e-134
Identity = 206/259 (79.54%), Postives = 207/259 (79.92%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATF-RQTLPLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDS  TF R TLPLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60

Query: 61  LWNDHPNDGDDDDPNDPHSASSNDSDEEEEE-ENGLVGWPPLKKRRKSLFMKEGVGRRAV 120
           LWNDHPNDGD DD NDP SASSNDSDEEEEE ENGLVGWPPLKKRRKSLFMKEGVGRRAV
Sbjct: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120

Query: 121 IRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELV 180
           IRRPAVKNDG FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLM MF    
Sbjct: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMF---- 180

Query: 181 FETYMHLMITQTLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENV 240
                                              DETNSEGY+LTFQNT GEWLLAENV
Sbjct: 181 -----------------------------------DETNSEGYRLTFQNTNGEWLLAENV 220

Query: 241 TWRNFIGTVQRINLEKKSG 257
           TWRNFIG VQRI LEKKSG
Sbjct: 241 TWRNFIGDVQRIKLEKKSG 220

[Close]

BLAST of CsGy1G016970 vs. ExPASy TrEMBL
Match: A0A6J1HA19 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461467 PE=3 SV=1)

HSP 1 Score: 271 bits (694), Expect = 1.97e-84
Identity = 146/254 (57.48%), Postives = 174/254 (68.50%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60
           MAMELQL LAL PTNP KPFDLNTH+     L FDSI+ KKR   +D  + FR+TLPLLL
Sbjct: 1   MAMELQLSLALFPTNPTKPFDLNTHHRALPCLDFDSISRKKRPLDIDPSSAFRRTLPLLL 60

Query: 61  WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 120
           WNDHPN+GDDD P +P+SASSN  D  EE+E  LVGWPPLKKRRK+LF+++ +GR   IR
Sbjct: 61  WNDHPNNGDDD-PKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAIR 120

Query: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELVFE 180
           RPA++NDG  +R L+ NNSRYVKVKMEGVGI RKVD+R+HH  DALRATLM MF      
Sbjct: 121 RPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMF------ 180

Query: 181 TYMHLMITQTLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTW 240
                                            D+ +S+GY LT+Q+T G+WLLAE+VTW
Sbjct: 181 ---------------------------------DKPDSDGYNLTYQDTDGDWLLAEDVTW 214

Query: 241 RNFIGTVQRINLEK 254
           R+FI TVQRI LEK
Sbjct: 241 RDFIRTVQRIKLEK 214

[Close]

BLAST of CsGy1G016970 vs. ExPASy TrEMBL
Match: A0A6J1JF88 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485214 PE=3 SV=1)

HSP 1 Score: 268 bits (684), Expect = 3.89e-82
Identity = 146/254 (57.48%), Postives = 173/254 (68.11%), Query Frame = 0


Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60
           MAMELQLGLAL PTNP KPF LNTH+     L FDSI+ KKR   +D  + FR+TLPLLL
Sbjct: 79  MAMELQLGLALFPTNPTKPFHLNTHHRALPCLDFDSISGKKRPLDIDPSSAFRRTLPLLL 138

Query: 61  WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 120
           WNDHPNDGDDD PNDP+SASSN  D  +E+E  LVGWPPLKKRRK+LF+++ + R  VIR
Sbjct: 139 WNDHPNDGDDD-PNDPNSASSNHPDNPKEQEIELVGWPPLKKRRKTLFVQKRIRRAVVIR 198

Query: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELVFE 180
           RPA++N G   R L+ NNS YVKVKMEGVGI RKVD+R+HH FDALRATLM MF      
Sbjct: 199 RPAMENGGGVHRELNSNNSLYVKVKMEGVGIGRKVDIRQHHCFDALRATLMNMF------ 258

Query: 181 TYMHLMITQTLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTW 240
                                            D+ +S+GY LT+Q+T G+WLLA++VTW
Sbjct: 259 ---------------------------------DKPDSDGYNLTYQDTDGDWLLADDVTW 292

Query: 241 RNFIGTVQRINLEK 254
           R+FI TVQRI LEK
Sbjct: 319 RDFIRTVQRIKLEK 292

[Close]

BLAST of CsGy1G016970 vs. ExPASy TrEMBL
Match: A0A6J1F6G3 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111441247 PE=3 SV=1)

HSP 1 Score: 231 bits (588), Expect = 8.02e-73
Identity = 136/258 (52.71%), Postives = 162/258 (62.79%), Query Frame = 0


Query: 3   MELQLGLALIPTNPIKPFDLNTH---NNNPISLVFDSINHKKRSRHLDSPATFRQTLPLL 62
           MELQLGL+LIP    KPFDLN     ++    L  +S   KKR  H+D    FR+TLPLL
Sbjct: 1   MELQLGLSLIPA---KPFDLNNSLLLHDTASCLDLNSTIRKKRPLHVDPSLAFRRTLPLL 60

Query: 63  LWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVI 122
           LWNDHPN+GDDDD NDPHSAS++  +EEEEE+N LVGWPPLKKR+    M++  GR    
Sbjct: 61  LWNDHPNNGDDDD-NDPHSASNDSDEEEEEEDNRLVGWPPLKKRKTRSLMQKRRGRG--- 120

Query: 123 RRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELVF 182
            RPAV   G+ W     +NSRYVKVKMEGVGI RKVDL ++H FD LRATLMKMFG L  
Sbjct: 121 -RPAVNGGGLNWN----SNSRYVKVKMEGVGIGRKVDLSQYHCFDELRATLMKMFGYLE- 180

Query: 183 ETYMHLMITQTLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVT 242
                                            TDE + +G +LT+Q+  G+WLLA++VT
Sbjct: 181 ---------------------------------TDEMDPDGQRLTYQDIDGDWLLADDVT 212

Query: 243 WRNFIGTVQRINLEKKSG 257
           WRNFIGTVQRI LEK  G
Sbjct: 241 WRNFIGTVQRIKLEKNRG 212

[Close]

BLAST of CsGy1G016970 vs. TAIR 10
Match: AT4G32280.1 (indole-3-acetic acid inducible 29 )

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-14
Identity = 79/286 (27.62%), Postives = 115/286 (40.21%), Query Frame = 0


Query: 3   MELQLGLALIPTNPIK---PFDLNTHNNNPISLVFDSINHKKRSRHLDSPATF------- 62
           MEL LGL+L P    K    FDLN H         +       +  L   ATF       
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKH------CAIEGAASCLGTEKLRFEATFGLGNVEE 60

Query: 63  ---RQTLPLLLWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFM 122
                   L   N  PN+ D+    DP  + S+   ++EEE + +VGWPP+    K+  +
Sbjct: 61  NCYMPKQRLFALNGQPNEEDE----DPLESESSIVYDDEEENSEVVGWPPV----KTCMI 120

Query: 123 KEGV-----------------GRRAVIRRPAVKNDGVFWRG------LDLNNSRYVKVKM 182
           K G                  GRR       + N      G      +   +S YVKVKM
Sbjct: 121 KYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKM 180

Query: 183 EGVGIARKVDLREHHSFDALRATLMKMFGELVFETYMHLMITQTLTHCLMLQLQNTFQAI 242
           +GV IARKVD++  +S+++L  +L+ MF E                              
Sbjct: 181 DGVAIARKVDIKLFNSYESLTNSLITMFTE------------------------------ 238

Query: 243 FKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINL 253
           ++ C    +     Y  TFQ  +G+WLL  +VTW+ F  +V RI++
Sbjct: 241 YEDC----DREDTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISI 238

[Close]

BLAST of CsGy1G016970 vs. TAIR 10
Match: AT4G28640.1 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 70.1 bits (170), Expect = 3.0e-12
Identity = 49/173 (28.32%), Postives = 79/173 (45.66%), Query Frame = 0


Query: 94  LVGWPPLKKRRKSLFMKEGVGR-----RAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEG 153
           +VGWPP++  R +  + +            I +   KN         + NS +VKV M+G
Sbjct: 89  VVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRS---DSTKMRNSMFVKVTMDG 148

Query: 154 VGIARKVDLREHHSFDALRATLMKMF-----GELVFETYMHLMITQTLTHCLMLQLQNTF 213
           + I RK+DL  H  +++L  TL +MF     G    ET  H+                  
Sbjct: 149 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMET---------------- 208

Query: 214 QAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKS 257
                + +L D   S G  LT+++ +G+W+L  +V W  FIG+V+R+ + K S
Sbjct: 209 ----PVKILPD--GSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]

BLAST of CsGy1G016970 vs. TAIR 10
Match: AT4G28640.2 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 70.1 bits (170), Expect = 3.0e-12
Identity = 49/173 (28.32%), Postives = 79/173 (45.66%), Query Frame = 0


Query: 94  LVGWPPLKKRRKSLFMKEGVGR-----RAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEG 153
           +VGWPP++  R +  + +            I +   KN         + NS +VKV M+G
Sbjct: 89  VVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRS---DSTKMRNSMFVKVTMDG 148

Query: 154 VGIARKVDLREHHSFDALRATLMKMF-----GELVFETYMHLMITQTLTHCLMLQLQNTF 213
           + I RK+DL  H  +++L  TL +MF     G    ET  H+                  
Sbjct: 149 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMET---------------- 208

Query: 214 QAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKS 257
                + +L D   S G  LT+++ +G+W+L  +V W  FIG+V+R+ + K S
Sbjct: 209 ----PVKILPD--GSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]

BLAST of CsGy1G016970 vs. TAIR 10
Match: AT4G28640.3 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 70.1 bits (170), Expect = 3.0e-12
Identity = 49/173 (28.32%), Postives = 79/173 (45.66%), Query Frame = 0


Query: 94  LVGWPPLKKRRKSLFMKEGVGR-----RAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEG 153
           +VGWPP++  R +  + +            I +   KN         + NS +VKV M+G
Sbjct: 89  VVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRS---DSTKMRNSMFVKVTMDG 148

Query: 154 VGIARKVDLREHHSFDALRATLMKMF-----GELVFETYMHLMITQTLTHCLMLQLQNTF 213
           + I RK+DL  H  +++L  TL +MF     G    ET  H+                  
Sbjct: 149 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMET---------------- 208

Query: 214 QAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKS 257
                + +L D   S G  LT+++ +G+W+L  +V W  FIG+V+R+ + K S
Sbjct: 209 ----PVKILPD--GSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]

BLAST of CsGy1G016970 vs. TAIR 10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.9e-12
Identity = 54/183 (29.51%), Postives = 85/183 (46.45%), Query Frame = 0


Query: 80  SSNDSDEEEEEENGLVGWPPLKKRR----------KSLFMKEGVGRRAVIRRPAVKNDGV 139
           SS+         + +VGWPP+   R          K+   +EG G + V++   +K D  
Sbjct: 56  SSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELK-DVS 115

Query: 140 FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFGELVFETYMHLMITQ 199
                 +    +VKV M+GVGI RKVD+R H S++ L  TL +MF               
Sbjct: 116 MKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMF------------FGM 175

Query: 200 TLTHCLMLQLQNTFQAIFKLCLLTDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQR 253
           T T C         + +  L LL     S  + LT+++ +G+W+L  +V WR FI +V+R
Sbjct: 176 TGTTCR--------EKVKPLRLL---DGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKR 214

The following BLAST results are available for this feature:

BLAST of CsGy1G016970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WC4	2.6e-13	27.62	Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=...	[more]
Q38829	4.2e-11	28.32	Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=...	[more]
Q38830	5.5e-11	29.51	Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=...	[more]
Q38828	1.8e-09	29.90	Auxin-responsive protein IAA10 OS=Arabidopsis thaliana OX=3702 GN=IAA10 PE=1 SV=...	[more]
A2XLV9	6.7e-09	25.67	Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 P...	[more]

BLAST of CsGy1G016970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150206.2	6.36e-149	84.82	auxin-responsive protein IAA29 [Cucumis sativus]	[more]
KGN65132.1	1.20e-147	84.82	hypothetical protein Csa_023489 [Cucumis sativus]	[more]
XP_008443966.1	1.67e-133	79.54	PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo]	[more]
XP_038879327.1	4.36e-113	68.08	auxin-responsive protein IAA29-like [Benincasa hispida]	[more]
KAG7023504.1	1.14e-88	56.81	Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]

BLAST of CsGy1G016970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWC5	5.83e-148	84.82	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G231530 PE=3 SV=1	[more]
A0A1S3B8T8	8.09e-134	79.54	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103487427 PE=3 SV=1	[more]
A0A6J1HA19	1.97e-84	57.48	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461467 PE=3 SV=1	[more]
A0A6J1JF88	3.89e-82	57.48	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485214 PE=3 SV=1	[more]
A0A6J1F6G3	8.02e-73	52.71	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111441247 PE=3 SV=1	[more]

BLAST of CsGy1G016970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32280.1	1.9e-14	27.62	indole-3-acetic acid inducible 29	[more]
AT4G28640.1	3.0e-12	28.32	indole-3-acetic acid inducible 11	[more]
AT4G28640.2	3.0e-12	28.32	indole-3-acetic acid inducible 11	[more]
AT4G28640.3	3.0e-12	28.32	indole-3-acetic acid inducible 11	[more]
AT1G04550.2	3.9e-12	29.51	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 135..257 e-value: 3.0E-20 score: 74.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..97
None	No IPR available	PANTHER	PTHR31734:SF38	AUXIN-RESPONSIVE PROTEIN IAA20	coord: 3..255
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 73..256 e-value: 2.7E-24 score: 86.4
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 3..255
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 139..255 score: 13.358849

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G016970.2	CsGy1G016970.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding