CsGy1G014900 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G014900
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Pentatricopeptide repeat-containing protein
Location	Gy14Chr1: 10808228 .. 10809862 (+)
RNA-Seq Expression	CsGy1G014900
Synteny	CsGy1G014900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAGAACGATGAGCAGCATTCCTTCCCACACAGCCACTCCTTCTCAACTCCAACTACCTCCTTTTACACCTTCTTCAATCCCACTTTCAAATCCAACAAAACTCAACTTCCCCCGCTCTCCCAACTCCCCTCATCGCAATATCTCCTCCAAATTCAACCCCAATTCTGTTGACCCCATTGTTCTATGGACCTCTTCTCTTGCTCGCTACTGCCGCAACGGCCAATTATCCGAAGCCGCTGCAGAGTTTACCCGCATGCGACTCGCCGGAGTTGAGCCCAACCACATCACATTTATTACGCTTCTCTCCGCCTGTGCTGATTTTCCGTCAGAAAGCTTCTTCTTCGCCTCTTCACTTCATGGCTACGCTTGTAAATATGGTCTGGATACTGGGCATGTAATGGTGGGGACTGCTCTCATTGATATGTATTCCAAATGTGCTCAATTGGGTCATGCTAGGAAGGTTTTTTATAACCTGGGTGTGAAAAACTCTGTCTCTTGGAACACTATGCTCAATGGTTTTATGAGGAATGGAGAGATTGAGTTGGCCATTCAACTGTTTGATGAAATGCCTACAAGAGATGCGATTTCTTGGACGGCTTTAATTAACGGTCTTTTGAAACATGGTTACTCGGAACAAGCATTGGAGTGCTTCCATCAGATGCAACGCTCGGGTGTCGCTGCTGATTATGTGTCTATAATTGCTGTTCTTGCTGCCTGTGCTGATTTGGGTGCTCTTACTTTGGGGTTGTGGGTTCATCGTTTTGTTATGCCGCAGGAGTTTAAGGATAATATTAAGATTAGTAATTCCTTGATAGATATGTATTCTAGATGTGGATGTATTGAGTTTGCCCGCCAAGTGTTTGTGAAAATGGCCAAACGAACTTTGGTATCTTGGAACTCTATCATTGTGGGGTTTGCAGTTAACGGATTTGCAGATGAATCTTTAGAGTTTTTTTATGCGATGCAGAAGGAAGGATTCAAGCCAGATGGAGTAAGCTACACGGGGGCTCTTACCGCGTGTAGCCATGCTGGCTTAGTGAATAAGGGCCTGGAATTGTTTGATAACATGAAGAGTGTACACAAAATTACTCCTAGGATTGAGCATTATGGGTGTATTGTCGATCTCTACGGTCGTGCTGGAAGGTTAGAGGATGCACTGAATATGATTGAGGAAATGCCGATGAAGCCGAATGAAGTTGTGTTGGGGTCGTTGCTTGCTGCTTGCAGGACTCATGGTGATGTGAACCTGGCTGAAAGGTTAATGAAACATCTCTTTAAGTTAGATCCAGAAGGCGATGCATATTATGTGCTTCTTTCAAACATATATGCAGCAATTGGGAAGTGGGATGGTGCTAACAATGTTAGGAGAACGATGAAAGCCCGAGGTGTGCAAAAAAAACCGGGTTATAGTTCTGTTGAAATTGATGGTAAGGTTCATGAATTTGTTGCAGGTGACAATTACCATGCTGATGCAGACAATATTTACTCAATGTTAGATTTGTTGTGTCATGAACTAAAGGTGTGTGGATATGTTCCTGGTAGTGATACCATTCTGAATACCAAAGAATCTAATAAGGACGATTGAAGCTTCTTTTGTGCTGTTAAAACCCTTATTTGATTCGTCCGTCTATGG

mRNA sequence

CTTAGAACGATGAGCAGCATTCCTTCCCACACAGCCACTCCTTCTCAACTCCAACTACCTCCTTTTACACCTTCTTCAATCCCACTTTCAAATCCAACAAAACTCAACTTCCCCCGCTCTCCCAACTCCCCTCATCGCAATATCTCCTCCAAATTCAACCCCAATTCTGTTGACCCCATTGTTCTATGGACCTCTTCTCTTGCTCGCTACTGCCGCAACGGCCAATTATCCGAAGCCGCTGCAGAGTTTACCCGCATGCGACTCGCCGGAGTTGAGCCCAACCACATCACATTTATTACGCTTCTCTCCGCCTGTGCTGATTTTCCGTCAGAAAGCTTCTTCTTCGCCTCTTCACTTCATGGCTACGCTTGTAAATATGGTCTGGATACTGGGCATGTAATGGTGGGGACTGCTCTCATTGATATGTATTCCAAATGTGCTCAATTGGGTCATGCTAGGAAGGTTTTTTATAACCTGGGTGTGAAAAACTCTGTCTCTTGGAACACTATGCTCAATGGTTTTATGAGGAATGGAGAGATTGAGTTGGCCATTCAACTGTTTGATGAAATGCCTACAAGAGATGCGATTTCTTGGACGGCTTTAATTAACGGTCTTTTGAAACATGGTTACTCGGAACAAGCATTGGAGTGCTTCCATCAGATGCAACGCTCGGGTGTCGCTGCTGATTATGTGTCTATAATTGCTGTTCTTGCTGCCTGTGCTGATTTGGGTGCTCTTACTTTGGGGTTGTGGGTTCATCGTTTTGTTATGCCGCAGGAGTTTAAGGATAATATTAAGATTAGTAATTCCTTGATAGATATGTATTCTAGATGTGGATGTATTGAGTTTGCCCGCCAAGTGTTTGTGAAAATGGCCAAACGAACTTTGGTATCTTGGAACTCTATCATTGTGGGGTTTGCAGTTAACGGATTTGCAGATGAATCTTTAGAGTTTTTTTATGCGATGCAGAAGGAAGGATTCAAGCCAGATGGAGTAAGCTACACGGGGGCTCTTACCGCGTGTAGCCATGCTGGCTTAGTGAATAAGGGCCTGGAATTGTTTGATAACATGAAGAGTGTACACAAAATTACTCCTAGGATTGAGCATTATGGGTGTATTGTCGATCTCTACGGTCGTGCTGGAAGGTTAGAGGATGCACTGAATATGATTGAGGAAATGCCGATGAAGCCGAATGAAGTTGTGTTGGGGTCGTTGCTTGCTGCTTGCAGGACTCATGGTGATGTGAACCTGGCTGAAAGGTTAATGAAACATCTCTTTAAGTTAGATCCAGAAGGCGATGCATATTATGTGCTTCTTTCAAACATATATGCAGCAATTGGGAAGTGGGATGGTGCTAACAATGTTAGGAGAACGATGAAAGCCCGAGGTGTGCAAAAAAAACCGGGTTATAGTTCTGTTGAAATTGATGGTAAGGTTCATGAATTTGTTGCAGGTGACAATTACCATGCTGATGCAGACAATATTTACTCAATGTTAGATTTGTTGTGTCATGAACTAAAGGTGTGTGGATATGTTCCTGGTAGTGATACCATTCTGAATACCAAAGAATCTAATAAGGACGATTGAAGCTTCTTTTGTGCTGTTAAAACCCTTATTTGATTCGTCCGTCTATGG

Coding sequence (CDS)

ATGAGCAGCATTCCTTCCCACACAGCCACTCCTTCTCAACTCCAACTACCTCCTTTTACACCTTCTTCAATCCCACTTTCAAATCCAACAAAACTCAACTTCCCCCGCTCTCCCAACTCCCCTCATCGCAATATCTCCTCCAAATTCAACCCCAATTCTGTTGACCCCATTGTTCTATGGACCTCTTCTCTTGCTCGCTACTGCCGCAACGGCCAATTATCCGAAGCCGCTGCAGAGTTTACCCGCATGCGACTCGCCGGAGTTGAGCCCAACCACATCACATTTATTACGCTTCTCTCCGCCTGTGCTGATTTTCCGTCAGAAAGCTTCTTCTTCGCCTCTTCACTTCATGGCTACGCTTGTAAATATGGTCTGGATACTGGGCATGTAATGGTGGGGACTGCTCTCATTGATATGTATTCCAAATGTGCTCAATTGGGTCATGCTAGGAAGGTTTTTTATAACCTGGGTGTGAAAAACTCTGTCTCTTGGAACACTATGCTCAATGGTTTTATGAGGAATGGAGAGATTGAGTTGGCCATTCAACTGTTTGATGAAATGCCTACAAGAGATGCGATTTCTTGGACGGCTTTAATTAACGGTCTTTTGAAACATGGTTACTCGGAACAAGCATTGGAGTGCTTCCATCAGATGCAACGCTCGGGTGTCGCTGCTGATTATGTGTCTATAATTGCTGTTCTTGCTGCCTGTGCTGATTTGGGTGCTCTTACTTTGGGGTTGTGGGTTCATCGTTTTGTTATGCCGCAGGAGTTTAAGGATAATATTAAGATTAGTAATTCCTTGATAGATATGTATTCTAGATGTGGATGTATTGAGTTTGCCCGCCAAGTGTTTGTGAAAATGGCCAAACGAACTTTGGTATCTTGGAACTCTATCATTGTGGGGTTTGCAGTTAACGGATTTGCAGATGAATCTTTAGAGTTTTTTTATGCGATGCAGAAGGAAGGATTCAAGCCAGATGGAGTAAGCTACACGGGGGCTCTTACCGCGTGTAGCCATGCTGGCTTAGTGAATAAGGGCCTGGAATTGTTTGATAACATGAAGAGTGTACACAAAATTACTCCTAGGATTGAGCATTATGGGTGTATTGTCGATCTCTACGGTCGTGCTGGAAGGTTAGAGGATGCACTGAATATGATTGAGGAAATGCCGATGAAGCCGAATGAAGTTGTGTTGGGGTCGTTGCTTGCTGCTTGCAGGACTCATGGTGATGTGAACCTGGCTGAAAGGTTAATGAAACATCTCTTTAAGTTAGATCCAGAAGGCGATGCATATTATGTGCTTCTTTCAAACATATATGCAGCAATTGGGAAGTGGGATGGTGCTAACAATGTTAGGAGAACGATGAAAGCCCGAGGTGTGCAAAAAAAACCGGGTTATAGTTCTGTTGAAATTGATGGTAAGGTTCATGAATTTGTTGCAGGTGACAATTACCATGCTGATGCAGACAATATTTACTCAATGTTAGATTTGTTGTGTCATGAACTAAAGGTGTGTGGATATGTTCCTGGTAGTGATACCATTCTGAATACCAAAGAATCTAATAAGGACGATTGA

Protein sequence

MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD*

Homology

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BLAST of CsGy1G014900 vs. ExPASy Swiss-Prot
Match: Q9MA50 (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PDE247 PE=2 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 1.5e-164
Identity = 277/463 (59.83%), Postives = 355/463 (76.67%), Query Frame = 0


Query: 48  KFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPS 107
           + N ++ +  V WTS +    RNG+L+EAA EF+ M LAGVEPNHITFI LLS C DF S
Sbjct: 27  RHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTS 86

Query: 108 ESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTM 167
            S      LHGYACK GLD  HVMVGTA+I MYSK  +   AR VF  +  KNSV+WNTM
Sbjct: 87  GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTM 146

Query: 168 LNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADY 227
           ++G+MR+G+++ A ++FD+MP RD ISWTA+ING +K GY E+AL  F +MQ SGV  DY
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206

Query: 228 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 287
           V+IIA L AC +LGAL+ GLWVHR+V+ Q+FK+N+++SNSLID+Y RCGC+EFARQVF  
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266

Query: 288 MAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKG 347
           M KRT+VSWNS+IVGFA NG A ESL +F  MQ++GFKPD V++TGALTACSH GLV +G
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326

Query: 348 LELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACR 407
           L  F  MK  ++I+PRIEHYGC+VDLY RAGRLEDAL +++ MPMKPNEVV+GSLLAAC 
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386

Query: 408 THG-DVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPG 467
            HG ++ LAERLMKHL  L+ +  + YV+LSN+YAA GKW+GA+ +RR MK  G++K+PG
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446

Query: 468 YSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYV 510
           +SS+EID  +H F+AGDN H +   I  +L+L+  +L++ G V
Sbjct: 447 FSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCV 489

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BLAST of CsGy1G014900 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 5.6e-103
Identity = 183/477 (38.36%), Postives = 293/477 (61.43%), Query Frame = 0


Query: 49  FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
           F+      + L  +  + Y R G   EA   F  M  +GV P+ I+ ++ +S+C+     
Sbjct: 294 FDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--R 353

Query: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTML 168
           +  +  S HGY  + G ++    +  ALIDMY KC +   A ++F  +  K  V+WN+++
Sbjct: 354 NILWGKSCHGYVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 413

Query: 169 NGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ-RSGVAADY 228
            G++ NGE++ A + F+ MP ++ +SW  +I+GL++    E+A+E F  MQ + GV AD 
Sbjct: 414 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 473

Query: 229 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 288
           V+++++ +AC  LGAL L  W++ ++     + ++++  +L+DM+SRCG  E A  +F  
Sbjct: 474 VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS 533

Query: 289 MAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKG 348
           +  R + +W + I   A+ G A+ ++E F  M ++G KPDGV++ GALTACSH GLV +G
Sbjct: 534 LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQG 593

Query: 349 LELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACR 408
            E+F +M  +H ++P   HYGC+VDL GRAG LE+A+ +IE+MPM+PN+V+  SLLAACR
Sbjct: 594 KEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACR 653

Query: 409 THGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGY 468
             G+V +A    + +  L PE    YVLLSN+YA+ G+W+    VR +MK +G++K PG 
Sbjct: 654 VQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGT 713

Query: 469 SSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPG-SDTILNTKESNK 524
           SS++I GK HEF +GD  H +  NI +MLD +       G+VP  S+ +++  E  K
Sbjct: 714 SSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767

[Close]

BLAST of CsGy1G014900 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.0e-100
Identity = 171/468 (36.54%), Postives = 291/468 (62.18%), Query Frame = 0


Query: 57  IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
           +V W S +  + + G   +A   F +M    V+ +H+T + +LSACA     +  F   +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI--RNLEFGRQV 256

Query: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGE 176
             Y  +  ++  ++ +  A++DMY+KC  +  A+++F  +  K++V+W TML+G+  + +
Sbjct: 257 CSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 316

Query: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ-RSGVAADYVSIIAVLA 236
            E A ++ + MP +D ++W ALI+   ++G   +AL  FH++Q +  +  + +++++ L+
Sbjct: 317 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 376

Query: 237 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVS 296
           ACA +GAL LG W+H ++     + N  ++++LI MYS+CG +E +R+VF  + KR +  
Sbjct: 377 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 436

Query: 297 WNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK 356
           W+++I G A++G  +E+++ FY MQ+   KP+GV++T    ACSH GLV++   LF  M+
Sbjct: 437 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 496

Query: 357 SVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLA 416
           S + I P  +HY CIVD+ GR+G LE A+  IE MP+ P+  V G+LL AC+ H ++NLA
Sbjct: 497 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 556

Query: 417 ERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGK 476
           E     L +L+P  D  +VLLSNIYA +GKW+  + +R+ M+  G++K+PG SS+EIDG 
Sbjct: 557 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 616

Query: 477 VHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNK 524
           +HEF++GDN H  ++ +Y  L  +  +LK  GY P    +L   E  +
Sbjct: 617 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEE 661

[Close]

BLAST of CsGy1G014900 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 4.1e-98
Identity = 178/454 (39.21%), Postives = 273/454 (60.13%), Query Frame = 0


Query: 57  IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
           +V W S +  + +NG   EA   F  M  + VEP+ +T  +++SACA     +      +
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASL--SAIKVGQEV 277

Query: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGE 176
           HG   K       +++  A +DMY+KC+++  AR +F ++ ++N ++  +M++G+     
Sbjct: 278 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 337

Query: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAA 236
            + A  +F +M  R+ +SW ALI G  ++G +E+AL  F  ++R  V   + S   +L A
Sbjct: 338 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 397

Query: 237 CADLGALTLGLWVHRFVMPQEFK------DNIKISNSLIDMYSRCGCIEFARQVFVKMAK 296
           CADL  L LG+  H  V+   FK      D+I + NSLIDMY +CGC+E    VF KM +
Sbjct: 398 CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 457

Query: 297 RTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLEL 356
           R  VSWN++I+GFA NG+ +E+LE F  M + G KPD ++  G L+AC HAG V +G   
Sbjct: 458 RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 517

Query: 357 FDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHG 416
           F +M     + P  +HY C+VDL GRAG LE+A +MIEEMPM+P+ V+ GSLLAAC+ H 
Sbjct: 518 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR 577

Query: 417 DVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSV 476
           ++ L + + + L +++P     YVLLSN+YA +GKW+   NVR++M+  GV K+PG S +
Sbjct: 578 NITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 637

Query: 477 EIDGKVHEFVAGDNYHADADNIYSMLDLLCHELK 505
           +I G  H F+  D  H     I+S+LD+L  E++
Sbjct: 638 KIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669

[Close]

BLAST of CsGy1G014900 vs. ExPASy Swiss-Prot
Match: Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 358.6 bits (919), Expect = 1.2e-97
Identity = 163/468 (34.83%), Postives = 277/468 (59.19%), Query Frame = 0


Query: 49  FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
           F+    + +  W   ++ Y R  +  E+      M    V P  +T + +LSAC+    +
Sbjct: 193 FDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK 252

Query: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTML 168
                  +H Y  +   +   + +  AL++ Y+ C ++  A ++F ++  ++ +SW +++
Sbjct: 253 D--LCKRVHEYVSECKTEPS-LRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIV 312

Query: 169 NGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYV 228
            G++  G ++LA   FD+MP RD ISWT +I+G L+ G   ++LE F +MQ +G+  D  
Sbjct: 313 KGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEF 372

Query: 229 SIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKM 288
           ++++VL ACA LG+L +G W+  ++   + K+++ + N+LIDMY +CGC E A++VF  M
Sbjct: 373 TMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 432

Query: 289 AKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGL 348
            +R   +W +++VG A NG   E+++ F+ MQ    +PD ++Y G L+AC+H+G+V++  
Sbjct: 433 DQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQAR 492

Query: 349 ELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRT 408
           + F  M+S H+I P + HYGC+VD+ GRAG +++A  ++ +MPM PN +V G+LL A R 
Sbjct: 493 KFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRL 552

Query: 409 HGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYS 468
           H D  +AE   K + +L+P+  A Y LL NIYA   +W     VRR +    ++K PG+S
Sbjct: 553 HNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFS 612

Query: 469 SVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTIL 517
            +E++G  HEFVAGD  H  ++ IY  L+ L  E     Y+P +  +L
Sbjct: 613 LIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELL 657

[Close]

BLAST of CsGy1G014900 vs. NCBI nr
Match: XP_004139593.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucumis sativus])

HSP 1 Score: 1066 bits (2756), Expect = 0.0
Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 0


Query: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
           MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW
Sbjct: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60

Query: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
           TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA
Sbjct: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120

Query: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
           CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA
Sbjct: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180

Query: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
           IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240

Query: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
           GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300

Query: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
           VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI
Sbjct: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
           TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420

Query: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
           HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV
Sbjct: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480

Query: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD 525
           AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD
Sbjct: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD 525

[Close]

BLAST of CsGy1G014900 vs. NCBI nr
Match: XP_008458940.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucumis melo] >KAA0054376.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12413.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 941 bits (2433), Expect = 0.0
Identity = 473/524 (90.27%), Postives = 488/524 (93.13%), Query Frame = 0


Query: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
           MSSIPSH A+PSQLQ PP   SSIPLSNPTK+NFPRSP SPH NI SKF  NSV PIV W
Sbjct: 1   MSSIPSHIASPSQLQQPPS--SSIPLSNPTKVNFPRSPKSPHCNIFSKFTANSVHPIVQW 60

Query: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
           TSS+ARYC NGQL EAAAEFTRMRLAGVEPNHITFITLLS CADFPSESFF ASSLHGYA
Sbjct: 61  TSSIARYCGNGQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSESFF-ASSLHGYA 120

Query: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
           CK+GLDTGHVMVGTALIDMYSKC+QLG A+KVF  LGVKNSVSWNTMLNGFMRNGEIELA
Sbjct: 121 CKFGLDTGHVMVGTALIDMYSKCSQLGLAKKVFDYLGVKNSVSWNTMLNGFMRNGEIELA 180

Query: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
           IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGV ADYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVVADYVSIIAVLAACADL 240

Query: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
           GALT GLWV+RFVM QEFKDN++ISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII
Sbjct: 241 GALTSGLWVNRFVMQQEFKDNVRISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300

Query: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
           VGFA NGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK VHKI
Sbjct: 301 VGFAFNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHKI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
           TP IEHYGCIVDLYGRAGRLEDA N+IEEMPMKPNEVVLGSLLAACRTHGDV LAERLMK
Sbjct: 361 TPGIEHYGCIVDLYGRAGRLEDASNVIEEMPMKPNEVVLGSLLAACRTHGDVRLAERLMK 420

Query: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
           H+FKLD  GD+ YVLLSNIYAAIGKW+GAN VRRTMKARGVQKK GYSSVEIDGKVHEFV
Sbjct: 421 HIFKLDSVGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKRGYSSVEIDGKVHEFV 480

Query: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 524
           AGD YHADADNIYSMLDLL HELKVCGYVP +D ILNTK+SNKD
Sbjct: 481 AGDKYHADADNIYSMLDLLFHELKVCGYVPDTDIILNTKDSNKD 521

[Close]

BLAST of CsGy1G014900 vs. NCBI nr
Match: XP_038877228.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Benincasa hispida])

HSP 1 Score: 909 bits (2349), Expect = 0.0
Identity = 453/524 (86.45%), Postives = 480/524 (91.60%), Query Frame = 0


Query: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
           MSS PS+TA PSQLQ  P  PSSIPLSNPTKLNFPRSPNS HRNISSKF  NS+DPIVLW
Sbjct: 1   MSSSPSYTAIPSQLQQYPNPPSSIPLSNPTKLNFPRSPNSSHRNISSKFPANSIDPIVLW 60

Query: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
           TSSLARYCRNGQLSEAA EFTRMRLAGVEPNH+TFITLLS C DFPSES FF SSLHGYA
Sbjct: 61  TSSLARYCRNGQLSEAATEFTRMRLAGVEPNHVTFITLLSGCTDFPSESLFFGSSLHGYA 120

Query: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
            K GLDTGHVMVGTAL+DMY+KCAQ   ARKVF  LG+KNSV+WNTML+G+ RNGEIELA
Sbjct: 121 RKLGLDTGHVMVGTALVDMYAKCAQSRLARKVFDYLGMKNSVTWNTMLDGYTRNGEIELA 180

Query: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
           I LFDEMPTRDAISWTALINGLLK G+SEQALECFHQMQ SG+  DYVSIIAVLAACADL
Sbjct: 181 IDLFDEMPTRDAISWTALINGLLKQGFSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240

Query: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
           GALTLGLWV+RFVM QEFKDNI+ISNSL+DMYSRCGCIEFARQVF KM KRTLVSWNSII
Sbjct: 241 GALTLGLWVNRFVMQQEFKDNIRISNSLVDMYSRCGCIEFARQVFEKMPKRTLVSWNSII 300

Query: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
           VGFAVNGFADESLEFF AMQ EGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK +HKI
Sbjct: 301 VGFAVNGFADESLEFFDAMQNEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRIHKI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
           TPRIEHYGCIVDLYGRAGRLEDALN+IEEMPMKPNEVVLGSLLAACRT+GDV+LAE+LMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTYGDVSLAEKLMK 420

Query: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
           HL KLDP GD+ YVLLSNIYAAIG+W+GAN VRRTMKARGVQKKPG SSVEIDGKVHEFV
Sbjct: 421 HLSKLDPRGDSNYVLLSNIYAAIGRWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV 480

Query: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 524
           AGD YHADADNIYSML+LL HELK+ GYVP ++ ILNTKE +KD
Sbjct: 481 AGDKYHADADNIYSMLELLFHELKIYGYVPDTNIILNTKEFSKD 524

[Close]

BLAST of CsGy1G014900 vs. NCBI nr
Match: XP_022142716.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Momordica charantia])

HSP 1 Score: 871 bits (2251), Expect = 0.0
Identity = 433/524 (82.63%), Postives = 471/524 (89.89%), Query Frame = 0


Query: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
           MSSIP++TA   QLQ  P   +SIPL NP  +NFPRS NS +R+ISSK   NS+DPIVLW
Sbjct: 1   MSSIPANTAAAVQLQQYPNPATSIPLPNPETINFPRSENSSNRHISSKSTGNSIDPIVLW 60

Query: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
           TSS+ARYCRNGQL+EAAAEFT MRLAGVEPNH+T ITLLS CADFPSES +F SSLHGYA
Sbjct: 61  TSSIARYCRNGQLAEAAAEFTSMRLAGVEPNHVTLITLLSGCADFPSESLYFGSSLHGYA 120

Query: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
            K GLDT HVMVGT+++DMY+KCAQLG AR+VF  L +KNSVSWNTML+G+ RNGEIELA
Sbjct: 121 RKLGLDTAHVMVGTSIVDMYAKCAQLGLARRVFDYLRMKNSVSWNTMLDGYTRNGEIELA 180

Query: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
           I LFDEMPTRDAISWTALINGLLK GYSEQALECFHQMQ SG+  DYVSIIAVLAACADL
Sbjct: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIKPDYVSIIAVLAACADL 240

Query: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
           G LTLGLWV+RFVM QEFKDNI+ISNSLIDMYSRCGCI FARQVF +M+KRTLVSWNSII
Sbjct: 241 GTLTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIGFARQVFERMSKRTLVSWNSII 300

Query: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
           VG+A NGFADESLEFF AMQKEGFKPD VSYTGALTACSHAGLVNKGLELFDNMK VH+I
Sbjct: 301 VGYAANGFADESLEFFDAMQKEGFKPDAVSYTGALTACSHAGLVNKGLELFDNMKRVHRI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
            PRIEHYGCIVDLYGRAGRLEDAL++IE+MPMKPNEVVLGSLLAACRTHGDV+LAERLMK
Sbjct: 361 IPRIEHYGCIVDLYGRAGRLEDALDVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420

Query: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
           HL KLDP GD+ YVLLSNIYAAIGKW+GAN VRRTMKARGVQKKPG+SSVEIDGKVHEFV
Sbjct: 421 HLSKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480

Query: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 524
           AGD YHADAD+IYSML LL HELK+CG VP ++T LNTKES+KD
Sbjct: 481 AGDKYHADADSIYSMLQLLVHELKICGSVPETETFLNTKESSKD 524

[Close]

BLAST of CsGy1G014900 vs. NCBI nr
Match: XP_023521260.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 838 bits (2164), Expect = 4.59e-303
Identity = 415/524 (79.20%), Postives = 459/524 (87.60%), Query Frame = 0


Query: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
           MSS+P+HTA P Q QL  ++      SNP+ LNFPR PNS           N + PIVLW
Sbjct: 1   MSSVPAHTAVPFQFQLQQYS-----NSNPSNLNFPRYPNS----------SNPIKPIVLW 60

Query: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
           TSS+ARYCRN QL EAAAEFTRMRLAGVEPNHITFITLLS CADFPS S  F +SLHGY 
Sbjct: 61  TSSIARYCRNDQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHGYV 120

Query: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
            K GLDTGHVMVGTALI MY+KCAQLG AR VF  L +KNSV+WNTML+G+MRNGEIELA
Sbjct: 121 RKLGLDTGHVMVGTALIAMYAKCAQLGLARNVFDYLDMKNSVTWNTMLDGYMRNGEIELA 180

Query: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
           I+LFDEMPTRDAISWTALING LK GYSEQALECFH+MQ SG+  DYVSIIAVLAACADL
Sbjct: 181 IELFDEMPTRDAISWTALINGFLKQGYSEQALECFHEMQCSGIEPDYVSIIAVLAACADL 240

Query: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
           GAL+ GLWV+RF+M QEFKDNI+ISNSLIDMYSRCGCIEFARQVF KM KRTLVSWNS+I
Sbjct: 241 GALSFGLWVNRFLMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFDKMPKRTLVSWNSMI 300

Query: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
           VGFA+NGFADESLEFF AMQKEGFK DGVSYTGALTACSHAGLVNKGLELFDNMK VH+I
Sbjct: 301 VGFAINGFADESLEFFDAMQKEGFKADGVSYTGALTACSHAGLVNKGLELFDNMKRVHRI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
           TPRIEHYGCIVDLY RAGRL++ALN+IE MPMKPNEVVLGSLLAACRTHGDV+LAERL+K
Sbjct: 361 TPRIEHYGCIVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERLIK 420

Query: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
           +LF+LDP GD+ YVLLSNIYAA+G+W+GAN VRRTMKARGVQKKPG+SS+EIDGKVHEFV
Sbjct: 421 YLFELDPGGDSSYVLLSNIYAAVGRWEGANKVRRTMKARGVQKKPGFSSIEIDGKVHEFV 480

Query: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 524
           AGD YHADADNIYSML++L HELK+CGYVP + T++N  ES+K+
Sbjct: 481 AGDKYHADADNIYSMLEVLFHELKICGYVPETATLMNGNESSKE 509

[Close]

BLAST of CsGy1G014900 vs. ExPASy TrEMBL
Match: A0A0A0LYD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169950 PE=4 SV=1)

HSP 1 Score: 1066 bits (2756), Expect = 0.0
Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 0


Query: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
           MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW
Sbjct: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60

Query: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
           TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA
Sbjct: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120

Query: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
           CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA
Sbjct: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180

Query: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
           IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240

Query: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
           GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300

Query: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
           VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI
Sbjct: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
           TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420

Query: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
           HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV
Sbjct: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480

Query: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD 525
           AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD
Sbjct: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD 525

[Close]

BLAST of CsGy1G014900 vs. ExPASy TrEMBL
Match: A0A5A7UJB6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G002000 PE=4 SV=1)

HSP 1 Score: 941 bits (2433), Expect = 0.0
Identity = 473/524 (90.27%), Postives = 488/524 (93.13%), Query Frame = 0


Query: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
           MSSIPSH A+PSQLQ PP   SSIPLSNPTK+NFPRSP SPH NI SKF  NSV PIV W
Sbjct: 1   MSSIPSHIASPSQLQQPPS--SSIPLSNPTKVNFPRSPKSPHCNIFSKFTANSVHPIVQW 60

Query: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
           TSS+ARYC NGQL EAAAEFTRMRLAGVEPNHITFITLLS CADFPSESFF ASSLHGYA
Sbjct: 61  TSSIARYCGNGQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSESFF-ASSLHGYA 120

Query: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
           CK+GLDTGHVMVGTALIDMYSKC+QLG A+KVF  LGVKNSVSWNTMLNGFMRNGEIELA
Sbjct: 121 CKFGLDTGHVMVGTALIDMYSKCSQLGLAKKVFDYLGVKNSVSWNTMLNGFMRNGEIELA 180

Query: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
           IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGV ADYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVVADYVSIIAVLAACADL 240

Query: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
           GALT GLWV+RFVM QEFKDN++ISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII
Sbjct: 241 GALTSGLWVNRFVMQQEFKDNVRISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300

Query: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
           VGFA NGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK VHKI
Sbjct: 301 VGFAFNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHKI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
           TP IEHYGCIVDLYGRAGRLEDA N+IEEMPMKPNEVVLGSLLAACRTHGDV LAERLMK
Sbjct: 361 TPGIEHYGCIVDLYGRAGRLEDASNVIEEMPMKPNEVVLGSLLAACRTHGDVRLAERLMK 420

Query: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
           H+FKLD  GD+ YVLLSNIYAAIGKW+GAN VRRTMKARGVQKK GYSSVEIDGKVHEFV
Sbjct: 421 HIFKLDSVGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKRGYSSVEIDGKVHEFV 480

Query: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 524
           AGD YHADADNIYSMLDLL HELKVCGYVP +D ILNTK+SNKD
Sbjct: 481 AGDKYHADADNIYSMLDLLFHELKVCGYVPDTDIILNTKDSNKD 521

[Close]

BLAST of CsGy1G014900 vs. ExPASy TrEMBL
Match: A0A1S3C956 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498199 PE=4 SV=1)

HSP 1 Score: 941 bits (2433), Expect = 0.0
Identity = 473/524 (90.27%), Postives = 488/524 (93.13%), Query Frame = 0


Query: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
           MSSIPSH A+PSQLQ PP   SSIPLSNPTK+NFPRSP SPH NI SKF  NSV PIV W
Sbjct: 1   MSSIPSHIASPSQLQQPPS--SSIPLSNPTKVNFPRSPKSPHCNIFSKFTANSVHPIVQW 60

Query: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
           TSS+ARYC NGQL EAAAEFTRMRLAGVEPNHITFITLLS CADFPSESFF ASSLHGYA
Sbjct: 61  TSSIARYCGNGQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSESFF-ASSLHGYA 120

Query: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
           CK+GLDTGHVMVGTALIDMYSKC+QLG A+KVF  LGVKNSVSWNTMLNGFMRNGEIELA
Sbjct: 121 CKFGLDTGHVMVGTALIDMYSKCSQLGLAKKVFDYLGVKNSVSWNTMLNGFMRNGEIELA 180

Query: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
           IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGV ADYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVVADYVSIIAVLAACADL 240

Query: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
           GALT GLWV+RFVM QEFKDN++ISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII
Sbjct: 241 GALTSGLWVNRFVMQQEFKDNVRISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300

Query: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
           VGFA NGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK VHKI
Sbjct: 301 VGFAFNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHKI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
           TP IEHYGCIVDLYGRAGRLEDA N+IEEMPMKPNEVVLGSLLAACRTHGDV LAERLMK
Sbjct: 361 TPGIEHYGCIVDLYGRAGRLEDASNVIEEMPMKPNEVVLGSLLAACRTHGDVRLAERLMK 420

Query: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
           H+FKLD  GD+ YVLLSNIYAAIGKW+GAN VRRTMKARGVQKK GYSSVEIDGKVHEFV
Sbjct: 421 HIFKLDSVGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKRGYSSVEIDGKVHEFV 480

Query: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 524
           AGD YHADADNIYSMLDLL HELKVCGYVP +D ILNTK+SNKD
Sbjct: 481 AGDKYHADADNIYSMLDLLFHELKVCGYVPDTDIILNTKDSNKD 521

[Close]

BLAST of CsGy1G014900 vs. ExPASy TrEMBL
Match: A0A6J1CN07 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012760 PE=4 SV=1)

HSP 1 Score: 871 bits (2251), Expect = 0.0
Identity = 433/524 (82.63%), Postives = 471/524 (89.89%), Query Frame = 0


Query: 1   MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
           MSSIP++TA   QLQ  P   +SIPL NP  +NFPRS NS +R+ISSK   NS+DPIVLW
Sbjct: 1   MSSIPANTAAAVQLQQYPNPATSIPLPNPETINFPRSENSSNRHISSKSTGNSIDPIVLW 60

Query: 61  TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
           TSS+ARYCRNGQL+EAAAEFT MRLAGVEPNH+T ITLLS CADFPSES +F SSLHGYA
Sbjct: 61  TSSIARYCRNGQLAEAAAEFTSMRLAGVEPNHVTLITLLSGCADFPSESLYFGSSLHGYA 120

Query: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
            K GLDT HVMVGT+++DMY+KCAQLG AR+VF  L +KNSVSWNTML+G+ RNGEIELA
Sbjct: 121 RKLGLDTAHVMVGTSIVDMYAKCAQLGLARRVFDYLRMKNSVSWNTMLDGYTRNGEIELA 180

Query: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
           I LFDEMPTRDAISWTALINGLLK GYSEQALECFHQMQ SG+  DYVSIIAVLAACADL
Sbjct: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIKPDYVSIIAVLAACADL 240

Query: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
           G LTLGLWV+RFVM QEFKDNI+ISNSLIDMYSRCGCI FARQVF +M+KRTLVSWNSII
Sbjct: 241 GTLTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIGFARQVFERMSKRTLVSWNSII 300

Query: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
           VG+A NGFADESLEFF AMQKEGFKPD VSYTGALTACSHAGLVNKGLELFDNMK VH+I
Sbjct: 301 VGYAANGFADESLEFFDAMQKEGFKPDAVSYTGALTACSHAGLVNKGLELFDNMKRVHRI 360

Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
            PRIEHYGCIVDLYGRAGRLEDAL++IE+MPMKPNEVVLGSLLAACRTHGDV+LAERLMK
Sbjct: 361 IPRIEHYGCIVDLYGRAGRLEDALDVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420

Query: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
           HL KLDP GD+ YVLLSNIYAAIGKW+GAN VRRTMKARGVQKKPG+SSVEIDGKVHEFV
Sbjct: 421 HLSKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480

Query: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 524
           AGD YHADAD+IYSML LL HELK+CG VP ++T LNTKES+KD
Sbjct: 481 AGDKYHADADSIYSMLQLLVHELKICGSVPETETFLNTKESSKD 524

[Close]

BLAST of CsGy1G014900 vs. ExPASy TrEMBL
Match: A0A6J1HU31 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466586 PE=4 SV=1)

HSP 1 Score: 835 bits (2158), Expect = 2.37e-302
Identity = 414/526 (78.71%), Postives = 460/526 (87.45%), Query Frame = 0


Query: 1   MSSIPSHTATPSQLQLPPFT--PSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIV 60
           MSS+PSHT  P Q QL  ++  PS IP SNP+ L+FPR+PNS           N + PIV
Sbjct: 1   MSSVPSHTGIPFQFQLQQYSNPPSPIPHSNPSNLSFPRTPNS----------SNPIKPIV 60

Query: 61  LWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHG 120
           LWTSS+ARYCRN QL+EAAAEFTRMRLAGVEPNHITFITLLS CADFPS S  F +SLHG
Sbjct: 61  LWTSSIARYCRNAQLAEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHG 120

Query: 121 YACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIE 180
           Y  K GLDTGHVMVGTALI MY+KCAQLG AR VF  L +KNSV+WNTML+G+MRNGEIE
Sbjct: 121 YVRKLGLDTGHVMVGTALIAMYAKCAQLGLARNVFDYLAMKNSVTWNTMLDGYMRNGEIE 180

Query: 181 LAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACA 240
           LAI+LFDEMPTRDAISWTALING LK GYSEQALECFH+MQ SG+  DYVSIIAVLAACA
Sbjct: 181 LAIELFDEMPTRDAISWTALINGFLKQGYSEQALECFHEMQCSGIEPDYVSIIAVLAACA 240

Query: 241 DLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNS 300
           DLGAL+ GLWV+RF+M QEFKDNI+ISNSLIDMYSRCGCIEFARQVF KM+K TLVSWNS
Sbjct: 241 DLGALSFGLWVNRFLMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFDKMSKHTLVSWNS 300

Query: 301 IIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVH 360
           +IVGFA+NGFADESLEFF AMQKEGF  DGVSYTGALTACSHAGLVNKGLELFDNMK VH
Sbjct: 301 MIVGFAINGFADESLEFFDAMQKEGFMADGVSYTGALTACSHAGLVNKGLELFDNMKRVH 360

Query: 361 KITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERL 420
           +ITPRIEHYGCIVDLY RAGRL++ALN+IE MPMKPNEVVLGSLLAACRTHGDV+LAERL
Sbjct: 361 RITPRIEHYGCIVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERL 420

Query: 421 MKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHE 480
           +K+LF+LDP GD+ YVLLSNIYAA+G+W+GAN VRRTMKARGVQKKPG+SS+EIDGKVHE
Sbjct: 421 IKYLFELDPGGDSSYVLLSNIYAAVGRWEGANKVRRTMKARGVQKKPGFSSIEIDGKVHE 480

Query: 481 FVAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 524
           FVAGD YH DADNIYSML++L HELK+ GYVP + T +N  ES+K+
Sbjct: 481 FVAGDKYHVDADNIYSMLEVLFHELKIYGYVPETATFMNGNESSKE 516

[Close]

BLAST of CsGy1G014900 vs. TAIR 10
Match: AT1G05750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 580.9 bits (1496), Expect = 1.1e-165
Identity = 277/463 (59.83%), Postives = 355/463 (76.67%), Query Frame = 0


Query: 48  KFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPS 107
           + N ++ +  V WTS +    RNG+L+EAA EF+ M LAGVEPNHITFI LLS C DF S
Sbjct: 27  RHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTS 86

Query: 108 ESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTM 167
            S      LHGYACK GLD  HVMVGTA+I MYSK  +   AR VF  +  KNSV+WNTM
Sbjct: 87  GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTM 146

Query: 168 LNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADY 227
           ++G+MR+G+++ A ++FD+MP RD ISWTA+ING +K GY E+AL  F +MQ SGV  DY
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206

Query: 228 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 287
           V+IIA L AC +LGAL+ GLWVHR+V+ Q+FK+N+++SNSLID+Y RCGC+EFARQVF  
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266

Query: 288 MAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKG 347
           M KRT+VSWNS+IVGFA NG A ESL +F  MQ++GFKPD V++TGALTACSH GLV +G
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326

Query: 348 LELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACR 407
           L  F  MK  ++I+PRIEHYGC+VDLY RAGRLEDAL +++ MPMKPNEVV+GSLLAAC 
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386

Query: 408 THG-DVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPG 467
            HG ++ LAERLMKHL  L+ +  + YV+LSN+YAA GKW+GA+ +RR MK  G++K+PG
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446

Query: 468 YSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYV 510
           +SS+EID  +H F+AGDN H +   I  +L+L+  +L++ G V
Sbjct: 447 FSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCV 489

[Close]

BLAST of CsGy1G014900 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )

HSP 1 Score: 376.3 bits (965), Expect = 3.9e-104
Identity = 183/477 (38.36%), Postives = 293/477 (61.43%), Query Frame = 0


Query: 49  FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
           F+      + L  +  + Y R G   EA   F  M  +GV P+ I+ ++ +S+C+     
Sbjct: 294 FDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--R 353

Query: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTML 168
           +  +  S HGY  + G ++    +  ALIDMY KC +   A ++F  +  K  V+WN+++
Sbjct: 354 NILWGKSCHGYVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 413

Query: 169 NGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ-RSGVAADY 228
            G++ NGE++ A + F+ MP ++ +SW  +I+GL++    E+A+E F  MQ + GV AD 
Sbjct: 414 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 473

Query: 229 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 288
           V+++++ +AC  LGAL L  W++ ++     + ++++  +L+DM+SRCG  E A  +F  
Sbjct: 474 VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS 533

Query: 289 MAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKG 348
           +  R + +W + I   A+ G A+ ++E F  M ++G KPDGV++ GALTACSH GLV +G
Sbjct: 534 LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQG 593

Query: 349 LELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACR 408
            E+F +M  +H ++P   HYGC+VDL GRAG LE+A+ +IE+MPM+PN+V+  SLLAACR
Sbjct: 594 KEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACR 653

Query: 409 THGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGY 468
             G+V +A    + +  L PE    YVLLSN+YA+ G+W+    VR +MK +G++K PG 
Sbjct: 654 VQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGT 713

Query: 469 SSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPG-SDTILNTKESNK 524
           SS++I GK HEF +GD  H +  NI +MLD +       G+VP  S+ +++  E  K
Sbjct: 714 SSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767

[Close]

BLAST of CsGy1G014900 vs. TAIR 10
Match: AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )

HSP 1 Score: 376.3 bits (965), Expect = 3.9e-104
Identity = 183/477 (38.36%), Postives = 293/477 (61.43%), Query Frame = 0


Query: 49  FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
           F+      + L  +  + Y R G   EA   F  M  +GV P+ I+ ++ +S+C+     
Sbjct: 294 FDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--R 353

Query: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTML 168
           +  +  S HGY  + G ++    +  ALIDMY KC +   A ++F  +  K  V+WN+++
Sbjct: 354 NILWGKSCHGYVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 413

Query: 169 NGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ-RSGVAADY 228
            G++ NGE++ A + F+ MP ++ +SW  +I+GL++    E+A+E F  MQ + GV AD 
Sbjct: 414 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 473

Query: 229 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 288
           V+++++ +AC  LGAL L  W++ ++     + ++++  +L+DM+SRCG  E A  +F  
Sbjct: 474 VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS 533

Query: 289 MAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKG 348
           +  R + +W + I   A+ G A+ ++E F  M ++G KPDGV++ GALTACSH GLV +G
Sbjct: 534 LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQG 593

Query: 349 LELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACR 408
            E+F +M  +H ++P   HYGC+VDL GRAG LE+A+ +IE+MPM+PN+V+  SLLAACR
Sbjct: 594 KEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACR 653

Query: 409 THGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGY 468
             G+V +A    + +  L PE    YVLLSN+YA+ G+W+    VR +MK +G++K PG 
Sbjct: 654 VQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGT 713

Query: 469 SSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPG-SDTILNTKESNK 524
           SS++I GK HEF +GD  H +  NI +MLD +       G+VP  S+ +++  E  K
Sbjct: 714 SSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767

[Close]

BLAST of CsGy1G014900 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 367.9 bits (943), Expect = 1.4e-101
Identity = 171/468 (36.54%), Postives = 291/468 (62.18%), Query Frame = 0


Query: 57  IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
           +V W S +  + + G   +A   F +M    V+ +H+T + +LSACA     +  F   +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI--RNLEFGRQV 256

Query: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGE 176
             Y  +  ++  ++ +  A++DMY+KC  +  A+++F  +  K++V+W TML+G+  + +
Sbjct: 257 CSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 316

Query: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ-RSGVAADYVSIIAVLA 236
            E A ++ + MP +D ++W ALI+   ++G   +AL  FH++Q +  +  + +++++ L+
Sbjct: 317 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 376

Query: 237 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVS 296
           ACA +GAL LG W+H ++     + N  ++++LI MYS+CG +E +R+VF  + KR +  
Sbjct: 377 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 436

Query: 297 WNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK 356
           W+++I G A++G  +E+++ FY MQ+   KP+GV++T    ACSH GLV++   LF  M+
Sbjct: 437 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 496

Query: 357 SVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLA 416
           S + I P  +HY CIVD+ GR+G LE A+  IE MP+ P+  V G+LL AC+ H ++NLA
Sbjct: 497 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 556

Query: 417 ERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGK 476
           E     L +L+P  D  +VLLSNIYA +GKW+  + +R+ M+  G++K+PG SS+EIDG 
Sbjct: 557 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 616

Query: 477 VHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNK 524
           +HEF++GDN H  ++ +Y  L  +  +LK  GY P    +L   E  +
Sbjct: 617 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEE 661

[Close]

BLAST of CsGy1G014900 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 360.1 bits (923), Expect = 2.9e-99
Identity = 178/454 (39.21%), Postives = 273/454 (60.13%), Query Frame = 0


Query: 57  IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
           +V W S +  + +NG   EA   F  M  + VEP+ +T  +++SACA     +      +
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASL--SAIKVGQEV 277

Query: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGE 176
           HG   K       +++  A +DMY+KC+++  AR +F ++ ++N ++  +M++G+     
Sbjct: 278 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 337

Query: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAA 236
            + A  +F +M  R+ +SW ALI G  ++G +E+AL  F  ++R  V   + S   +L A
Sbjct: 338 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 397

Query: 237 CADLGALTLGLWVHRFVMPQEFK------DNIKISNSLIDMYSRCGCIEFARQVFVKMAK 296
           CADL  L LG+  H  V+   FK      D+I + NSLIDMY +CGC+E    VF KM +
Sbjct: 398 CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 457

Query: 297 RTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLEL 356
           R  VSWN++I+GFA NG+ +E+LE F  M + G KPD ++  G L+AC HAG V +G   
Sbjct: 458 RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 517

Query: 357 FDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHG 416
           F +M     + P  +HY C+VDL GRAG LE+A +MIEEMPM+P+ V+ GSLLAAC+ H 
Sbjct: 518 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR 577

Query: 417 DVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSV 476
           ++ L + + + L +++P     YVLLSN+YA +GKW+   NVR++M+  GV K+PG S +
Sbjct: 578 NITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 637

Query: 477 EIDGKVHEFVAGDNYHADADNIYSMLDLLCHELK 505
           +I G  H F+  D  H     I+S+LD+L  E++
Sbjct: 638 KIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669

The following BLAST results are available for this feature:

BLAST of CsGy1G014900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA50	1.5e-164	59.83	Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidop...	[more]
Q9LUJ2	5.6e-103	38.36	Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX...	[more]
O82380	2.0e-100	36.54	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9SIT7	4.1e-98	39.21	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9LSB8	1.2e-97	34.83	Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th...	[more]

BLAST of CsGy1G014900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139593.1	0.0	100.00	pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucumis sa...	[more]
XP_008458940.1	0.0	90.27	PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic ...	[more]
XP_038877228.1	0.0	86.45	pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Benincasa ...	[more]
XP_022142716.1	0.0	82.63	pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Momordica ...	[more]
XP_023521260.1	4.59e-303	79.20	pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucurbita ...	[more]

BLAST of CsGy1G014900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYD6	0.0	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169950 PE=4 SV=1	[more]
A0A5A7UJB6	0.0	90.27	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C956	0.0	90.27	pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucumis ...	[more]
A0A6J1CN07	0.0	82.63	pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Momordic...	[more]
A0A6J1HU31	2.37e-302	78.71	pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucurbit...	[more]

BLAST of CsGy1G014900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05750.1	1.1e-165	59.83	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G22690.1	3.9e-104	38.36	CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012...	[more]
AT3G22690.2	3.9e-104	38.36	INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro...	[more]
AT2G29760.1	1.4e-101	36.54	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	2.9e-99	39.21	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 265..473 e-value: 3.4E-42 score: 146.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 125..245 e-value: 2.2E-28 score: 100.9 coord: 42..109 e-value: 9.9E-9 score: 36.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 171..450
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 191..238 e-value: 9.6E-9 score: 35.3 coord: 159..190 e-value: 6.1E-9 score: 35.9 coord: 57..103 e-value: 1.0E-7 score: 32.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 318..375 e-value: 1.4E-5 score: 25.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 367..390 e-value: 7.8E-4 score: 17.5 coord: 193..225 e-value: 1.1E-7 score: 29.6 coord: 294..327 e-value: 1.6E-5 score: 22.8 coord: 162..190 e-value: 9.0E-8 score: 29.8 coord: 329..356 e-value: 0.0029 score: 15.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 266..291 e-value: 0.0013 score: 18.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 56..90 score: 9.667924
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 160..190 score: 11.070971
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 292..326 score: 11.081932
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 191..225 score: 11.564229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 38..511
None	No IPR available	PANTHER	PTHR47926:SF65	BNAANNG25350D PROTEIN	coord: 38..511

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G014900.2	CsGy1G014900.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding