CsGy1G014140 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G014140
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Pentatricopeptide repeat-containing protein
Location	Gy14Chr1: 9824887 .. 9832915 (+)
RNA-Seq Expression	CsGy1G014140
Synteny	CsGy1G014140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTGTACCCAACCGAACTGATTTTTATTTTAAAAGATAGGATTTTTCTCTTTCTTCTTCAAACTAACGGCCTCTCAATCTCTATTCTCAAATTGCATCTCTCTCACCCAGCTAAGTAACTCACGTTCACGTCTTCAACTTCACGCCGCCCATCGCTCCACTTCTCCATAGCTCATTATCTCACTCTCACATTTCATCTCTCTTGACTCAGACTCAGACTCACGTTCACGTCCTCCACCGGTGACCGACCACCGCTCCTCCTCTGTCTCACGCTCACCCCTCTGACTCTCATCTCACGCTCCGAAATCGCGGAGATTCATTCAGTAAAACGGTTTTTGCAACTTTTTTCTCCCTTCGGTTCCCCCCTTGAATGGAAGATTCTCGTGGGCATTTCTTGCTTTGAAGAATATCTTCAAATTTTGAATCTTATAATCAATTTTATTTATGGTATGGCTTCTTCTATATTGTCTTTCATAATCTTATTGAATATTGTTATTGATTTGCAACTTTTTTCATCATTGTGTTGCTTTGTAGTATATTCCTCAAAATGCAAGTTGAAAATGTCCATTGGATTTTGTTCGCATTTCGTACTTCACATGTGTTTTCAATATTGTTTACAGTCTGTTGCACTGCATTCTTGTTATTTCTGGGGTAGTTGAACAAATCCAAACCATGGTGAATTTGTGTATCTTTTATTAAATTAGAGTTGAAGTGTTTGGTGTTTGGTGGAGATGGTTATTTTATGTCATTTTCCTGTGAAATTCATGGTTTTTCCTTTCCTTTTTCTTTATTATTCCTTCCATAGGACAAATTCGAAGCAAGACCAAGGAGCCAGAGGAAGAAGTTAGAACGAGAGCAATGGGCTACAATGTATAAAAGAGACGAGAGAGAGATAAGATTGAAGGGAAACAGAGTGTATCACTGATACTACTAATTGGATAGGTTCTTGTAATTTTATTTTCACTTGTAAGGTCAACTTTTGGTAGAAAACTATTTTTATAACCCCGTGGAGTTTGTAATTTGCACCTTCAAAGCTTCTCACTCGGAATTATGGATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGAATACAATGGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCTAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTAACCCTGCCGTCAACCAATTCTTTAACAACAAAACCTCAGCCCCTTCCCCACCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTCATGACTATACTAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCGTCACTCTTCCAAGGGAGGATTCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAGTGGTGTCTTCCCGTGCTTTGCTGTCTAAGCAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGAGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAACACGTTCTGTTGGGCACAGGAACAACATCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCATGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTCGAGGCAATGATGCGAGGGTTTATCAGAGGTGGGAGCTTAAATCTTGCTTGGAAGCTCCTTGTAGCTGCAAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACATGTTGGTTCTTACCTTACTGGAAGAGCTAGGACAGAGAGAAGCCTTGAAGTTAAACCAACAAGATTGTACAACTATAGTTAAGGTCTGCACAAGGCTTGGTAAATTTGAAATTGCTGAGAAACTTTATAGCTGGTATGTTGAATCTGGACATGAACCGAGTATAGTTATGTATACTGCCTTGGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGGAAACTGTCCTTTTGATCTTCCTGCTTATAGTGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTCGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATAATGTATATAGGAATATGATCACCATTTATTTAGTCTCAGGGAGGTTAGCCAAGTGTAAGGAAATTTATAAGGAAGCAGAGAATGCTGGATTTATGATGGACAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGAATCACCTGTGGCAAGTGATATTTTTTATTATCTATCACTGAGTTGCACTATCGGTTTACCTATCATCTAGTAGGTGAGTTGTTCTCAATGTATTGGAATTGCATTTTCATCTGCACTAAATAAATTGTTAATGAATATTCTTTGTTTCCCTTCATCTACCACGTTCATATTGCATCTAATCTATGGATTTCAGTAGTACATCTTAAAAGGTACTTGGATTTTTGCTTTAGGATATATACATATGACTCACATAATGACTTATGCACTTTTTTTTTTTTTTGTTTGTTTTTTTCCTTTTGAAAACAAAGCATGAAGCTCAAATGCATTACGCCAGAAATCTCTGATTTGCCCCAATACATTGTGATATCCAATCTGGCACATCAGTAACCCAACAAGAGAAAACCTGACAAGAAAGAGAAAATTTGGCCGATTTGGCCGATAAATGGGCCACACTATTACTCGTTCTGGGCAATTAAGTAAAGTGAAAACATCCGTATAAATAACTCCATATACAGATAGATAACTCCTTATGCAGATAAGGAAAAGTTGAAAGAATGTCTCCTGGACTAATAATATACATTGTACAAATTCAACGAAGATTTTGACATATACTGACCAACAATTCTTATTCTCATCTAGCTTCTATATATTGTTAGTTCTATTATTCTATGAAGTAACTCAATGCTTTGTCCTTCCAAGTACCTGTTTCTAGATAAGTTTCATAAAAGTGTACCATTCCTGTTGTAGTTATAGTCAATACAGATGTGCTTCTGGTACCAAAACATCCCTGTGTTGAAATTTTTTAAAAAACTAAGTCAAAATTTCTGCTATGAATGAAATCAAATTGTATGCTTATCAGAGGGGTCTGAAATTGGACAAAGACAGAGCTTGTATTGTACTCCCAGTCAGGGGAGGATATATGAGGAAGTTTGCTTTCATCAATTTTTACATTGCCCCTCATTAATCTCTCATGGTATTTCACCTTCAGCATATATACGAAGCTGTTCATTAAATTTTAGCTTCAAGTGCTGCATCTGCATGTAAGTCAAAGCCTTCAGTCACTCTATTTTATTTTTCTTCACTTTTTCTTTCTTGCGGGTTCATTTGCCTTTTCACATGTGCCCATGTGTGTGTATTTGTAACCAATCTCCCCTTGTTGATGAATATACATTTGAACATTTTGGGACCAACGAAGAAAGTTATCCCATTAAGTTGAATGGTAGTTATTTGGACAGTGGGACTGTTGTTTAGGGTGCGGTTGTCTAAGACTTCAGTGGCAATGGGCTTGGTGTCTGACATATTGCTGAAAAAACACCAACCCAAAGAGAAAAACCAAAGATTTGGAAAGAAAACACCAGATTAAAGAAGAAAAAACAGGGGTGGCGGTGATTGGAGGTGTAACATGGCAGAAGGTGACGGAACACGACATTGGTGTGATAGAACACCAACTAGGAGTGATCTTATTCAATCGGTAAAAACGAAAGAAATTACAAGGATGAATCGATAGATTGTCAATTCGGTGAAATAAATGCAAGAATACAAGAAAATAGTTGATTGCTCTCCTTCTATCTCTCCTCTCTCTCAAGGATGAAGATAAAGGTCCTTCGAAAATATTTCCTCCCCTCTCACAGTGACTCTCCCCGCTATTTAAACCTCCCATTCTCTCCTAACTAACTGTGGGCCCAGTATTAGCACTCACACTCACTCCCCATTACACATGCTTTCTCTTTCTTTCCTCTCCTGCTATATTGCAATATTATTGGAGGTCTAACATTGTTGCAGACTTGACTGACCTATGGTAGGAGCTATCCTAAGCAAAAAGCGGCTCCTTCGGACAAGTTTCACTCGAGCGAAAGAAAAAAAAAAGCTTTGACGGCTCTGGCTCCGGGTTCAGCTTGGATTTGAAGGATTGACCACGATGGTAAACAAGGAAAAGTTGACGACCCTGGCAGCGGGGGGCAAATAGGGTGTTTTTAGTGTTTGAGAAATAAGGTGTTTTTAGAGTTTTAGGACAATTTAATCTCTGATACCATGTGTAAAAATGTGTTTTCTCTTATTTCCCTCGGAAAGAAAGGGGTTTTCTTAAATAGAAATACCCAATACAAAAAATGAAAAATATAAATAAGGAAAAAATAAATACAGAAATATATCTTAAATACAATGAAAATATTAACAATGAAGGAAATAATCAACAATAAACAAACTTCTTAACTAAGATTAGTTGATTTTAACATGATGGAAGTTTTCTTTCACGAAGAATTTGGCTGAAATCTTGCCTGAAGAATTCAGTTAAATTCTTCTATCATTATGAGATCCAATATAAAATGTAAATTTAAAAATAATAAATAAGTGAAACTTTTGGCATCTCTTTCTTGGAGGGAATATCGATATTACAAAAAGGGAGGGTGGGGGGATGAAAAGAAAATAATTAGTGATGTATATCAGTGGATTGAATTTCCTCTAATTGAAGGGGATATAGATAAGAAATAGAAATTGGGAAAAGAATTGGAGAAACGAGAGAGATTGATTTGAGAGAAGCCGAGGAAAAAACTGAATGACATTTTGTGTATGGAGTACTTGACCAGTTCCAGCTTTCTGAGTGGGATGGTATAATGTACTGTTGGCTCTGGCTTTATGTGGTGTCCTTGCAATGGCACTCTCCACTACATGTTCACAATGTTGAAAGCTAAAGAAAATGTGCAATGGGAGTCGACTATTGAAGGTACACCACATGACACCCTTGCACAAGGCAAGAAGATGGTTACGTGCCTCACCTTGCCTAGGACCATAAGCTTGCCTCAAAATGCACCTCAATAACACTGCTGAGTACCTTTTCAATTTATACTTTTCAGCCTGAAAGCTGGTTTGCTAATTGAAAGTGACCGGTGGTTTTAGCAAGAATGTGTTAGGTACTTAAGCACCTTGGAGAGCCACGGGGTTTCTGTTGGGGTAGTAGAGCCAAGCTACTTAGGGCCCGTTTGGTAACGTTCCCGTTTTCTGTTTCCCATTTCTTGTTTCTGGTTCTAATTTTTTAAGAAACGGATGTGTTTGGTAACGTTCCTGTTTCTTGTTCCCAAAATAATTAGAAATGTTTCTAATTTAATAAGAAATTTGTGGGAACAACAAAAAAGAGTTTCTCCTCGTTCCATTCTTGTTCTCTTCCCTTTGTTTCTCCTCTTTGTTCTTGGGCTTTCTTCTCCGGCTCTCTTTTTCTCTTCGTTCGTTCCTCTTCCGTTTCTCTTTGTTTAGTTCCTCTCCGATTACCTTTTCTCTCTTTGTTCTTCGTTTCTTCTCCGGCTTTCTTCTTTGCCTCTCTTCTAAAGTTATGGCTATAGCTTTCTCAAGCTTCCTCTTCATCAAACGTACAGCTACCTTTTCCTCTTCATCAATTTCCAAATTCATGATTTTCTTTGCTCCATCAACAGGAAGCTCTTCTCTTTCTCCTCACTCCCAAAGCGGAACTTGGGAACAGAAAGGTATTCCCTTAATTTTCTCCCATTTTCCTATCATTTCTGTTATGGGTTTCTCAAATTTTCAATCCTAAGATGAATTTTGTTAAGATTTAAACCTTTTTGTTATCTTTGTTTGGCAGGATTTTTGTTTTCTATAGTAAATTTCAGCTGTAGTTTAGTGGAAAGGTGGATATTGTTTTTGGAAATTGAATCTATGTATTTGCTACTTATTGTTATCATTGTTCATTATCAAATTAGAACTCCAATCCTCTGTTTTTGCCTTCAAAACCCCTTTCAGATTCCAGGCATTCCTTGATTTATACTGATTTTATGCCTCATTTAATGATAATTAGCCTTATGGGTACTCTTGGGTTATTTTAACAACATTGCCAAATTTTAGCCTTTGTGTTCTATGTATTAGTGACACATCAGTTTAAGCAAAATACTCTTTAATGATCTCAGGTTCTCAACATTTTTTTATACAGCTGTCTAGGAAGTGAAACCTTCAATGGCACAATATGCTAGTTTAGTCCATACTAGCCTCTTAAATTATGGCTTTACTCACAAAATGAATCCTTCATATTGGAGATATGATATGGTTAAATCACGACCTTCCCCTCAACGTAGCTTTCGTGTCAAAGTTGTGCAAGATACCGAAGGTCCTAGTAGGATAGTTGATATCATTAGACTCGTGCCTGAGCTCTCAAGAAATTACTTTAGAAGTCCTTCGAGGAGAGCCCTTTTTGGATGAATCTCATTGTTGGGTGGCTTTTATGTGGCACAAAATATCTCATTGTCATTTGGAGCTTTTGGAGTAAATGATGTTTTTGCTACTGTGGTATGCATTCTCCTCACCGATGTTTCAATTTTATTACAATCGACCAAAGGTAACTTTCCCCATTGCTCTACTGAACAACTTCAAAATGGGTTTCACTTGTGGTCTTTTCATTGATGCTTTCAAACTTGCTAGTTAACAGCACTTGAAAAAACCATTCTGGTGGTAGCTATAGCATTTCCATTTGTAAAGTTCTTTGAGCGATAATTTTGGTTTTACTCTCTATCTGTACAGCTTGTTCTAATTCTTTTTGTTGAATTTTTTTCCATTTTCCCCTTTGTTTCTTCTGTATATTTTCAACATACGGTTTTCATTGGAGAGTTAAATGTTCTATACACCCTCAAATCAAATATAGTAACAAATTTGAATGTAATTGATGACTTTTAAGAGTTTAATTTTTGTTTGTGTATTGAAATGCATCCCTTGCAATGGAGAATTGTTTGGAAACCATGAATCCAGTGTTGACTATCAGCGACAAATTTAAGATGGTAAGTTGTTAATAAGATACAAGCTTTCACCTAGTGTACTTCAACAGAACCATAATGTGTAGTCACTTGGCATTATTGTGTTTACTATTGTTGTTAAGAATATCTCTTATCTTTTGGTTTGATTCATAGATAAGCTTCAGATGTATTGAAATTTATGCTGATACATAATTTAAATGATATTGATCTTACCTTCTTATCTTTTGGTTTGATTCAAGGCTGTTGTAGTCTATATTTTTGTGAATAACTGGCATTTCTTTCAAACTTTCATATAAATATTTGTTTTAAATCTCTTTTGTAGATTGGAGAATATGAAGAAACCATAGGCACATGTCTTACACTGAAGTCATGTTCTCTAATGTAGAGGAAGTCCTTGTGGTTGAAGAAGCTCAGCCAACTGAAACAAATCATTGCACAAGAGAAGAAGTTGAACCAAAACAAGCTACCAAAAAGGAGTTGAAGCCCATTGCCTGTGTACATAAGATCCTTATATTTAACTTGATTCTGTTGTCCCAAAGCTCAATATCTTAGTGCATTAAAGGGACTAGTGTTTTCATATATGTATATATTGAGCTGTAAGTTTATGTATATGTAGATGCAATGGGACAGATAAGCTAAGAATTTAGATGAGTTGTCGGTAGTCATCCAAGAAGAACAAATATAGAGAATCATGAAGTTTGTAAAACAAAACAACCTTGAATGTTTGGTTTGTATTGTGAATTATCTATGCCTCTTTC

mRNA sequence

CACTGTACCCAACCGAACTGATTTTTATTTTAAAAGATAGGATTTTTCTCTTTCTTCTTCAAACTAACGGCCTCTCAATCTCTATTCTCAAATTGCATCTCTCTCACCCAGCTAAGTAACTCACGTTCACGTCTTCAACTTCACGCCGCCCATCGCTCCACTTCTCCATAGCTCATTATCTCACTCTCACATTTCATCTCTCTTGACTCAGACTCAGACTCACGTTCACGTCCTCCACCGGTGACCGACCACCGCTCCTCCTCTGTCTCACGCTCACCCCTCTGACTCTCATCTCACGCTCCGAAATCGCGGAGATTCATTCAGTAAAACGGTTTTTGCAACTTTTTTCTCCCTTCGGTTCCCCCCTTGAATGGAAGATTCTCGTGGGCATTTCTTGCTTTGAAGAATATCTTCAAATTTTGAATCTTATAATCAATTTTATTTATGGACAAATTCGAAGCAAGACCAAGGAGCCAGAGGAAGAAGTTAGAACGAGAGCAATGGGCTACAATGTATAAAAGAGACGAGAGAGAGATAAGATTGAAGGGAAACAGAGTGTATCACTGATACTACTAATTGGATAGGTTCTTGTAATTTTATTTTCACTTGTAAGGTCAACTTTTGGTAGAAAACTATTTTTATAACCCCGTGGAGTTTGTAATTTGCACCTTCAAAGCTTCTCACTCGGAATTATGGATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGAATACAATGGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCTAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTAACCCTGCCGTCAACCAATTCTTTAACAACAAAACCTCAGCCCCTTCCCCACCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTCATGACTATACTAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCGTCACTCTTCCAAGGGAGGATTCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAGTGGTGTCTTCCCGTGCTTTGCTGTCTAAGCAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGAGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAACACGTTCTGTTGGGCACAGGAACAACATCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCATGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTCGAGGCAATGATGCGAGGGTTTATCAGAGGTGGGAGCTTAAATCTTGCTTGGAAGCTCCTTGTAGCTGCAAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACATGTTGGTTCTTACCTTACTGGAAGAGCTAGGACAGAGAGAAGCCTTGAAGTTAAACCAACAAGATTGTACAACTATAGTTAAGGTCTGCACAAGGCTTGGTAAATTTGAAATTGCTGAGAAACTTTATAGCTGGTATGTTGAATCTGGACATGAACCGAGTATAGTTATGTATACTGCCTTGGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGGAAACTGTCCTTTTGATCTTCCTGCTTATAGTGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTCGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATAATGTATATAGGAATATGATCACCATTTATTTAGTCTCAGGGAGGTTAGCCAAGTGTAAGGAAATTTATAAGGAAGCAGAGAATGCTGGATTTATGATGGACAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGAATCACCTGTGGCAAGTGATATTTTTTATTATCTATCACTGAGTTGCACTATCGGTTTACCTATCATCTAGTAGATTGGAGAATATGAAGAAACCATAGGCACATGTCTTACACTGAAGTCATGTTCTCTAATGTAGAGGAAGTCCTTGTGGTTGAAGAAGCTCAGCCAACTGAAACAAATCATTGCACAAGAGAAGAAGTTGAACCAAAACAAGCTACCAAAAAGGAGTTGAAGCCCATTGCCTGTGTACATAAGATCCTTATATTTAACTTGATTCTGTTGTCCCAAAGCTCAATATCTTAGTGCATTAAAGGGACTAGTGTTTTCATATATGTATATATTGAGCTGTAAGTTTATGTATATGTAGATGCAATGGGACAGATAAGCTAAGAATTTAGATGAGTTGTCGGTAGTCATCCAAGAAGAACAAATATAGAGAATCATGAAGTTTGTAAAACAAAACAACCTTGAATGTTTGGTTTGTATTGTGAATTATCTATGCCTCTTTC

Coding sequence (CDS)

ATGGATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGAATACAATGGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCTAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTAACCCTGCCGTCAACCAATTCTTTAACAACAAAACCTCAGCCCCTTCCCCACCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTCATGACTATACTAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCGTCACTCTTCCAAGGGAGGATTCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAGTGGTGTCTTCCCGTGCTTTGCTGTCTAAGCAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGAGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAACACGTTCTGTTGGGCACAGGAACAACATCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCATGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTCGAGGCAATGATGCGAGGGTTTATCAGAGGTGGGAGCTTAAATCTTGCTTGGAAGCTCCTTGTAGCTGCAAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACATGTTGGTTCTTACCTTACTGGAAGAGCTAGGACAGAGAGAAGCCTTGAAGTTAAACCAACAAGATTGTACAACTATAGTTAAGGTCTGCACAAGGCTTGGTAAATTTGAAATTGCTGAGAAACTTTATAGCTGGTATGTTGAATCTGGACATGAACCGAGTATAGTTATGTATACTGCCTTGGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGGAAACTGTCCTTTTGATCTTCCTGCTTATAGTGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTCGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATAATGTATATAGGAATATGATCACCATTTATTTAGTCTCAGGGAGGTTAGCCAAGTGTAAGGAAATTTATAAGGAAGCAGAGAATGCTGGATTTATGATGGACAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGA

Protein sequence

MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQITSMLLQAKR*

Homology

[Close]

BLAST of CsGy1G014140 vs. ExPASy Swiss-Prot
Match: Q5XET4 (Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana OX=3702 GN=EMB975 PE=2 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.8e-140
Identity = 266/476 (55.88%), Postives = 341/476 (71.64%), Query Frame = 0


Query: 17  GNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLIS 76
           GN G+   N     + N  ++  KNL  PRR KLPP+  VN F       P         
Sbjct: 23  GNIGVTRVNAS---QRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEP--------- 82

Query: 77  SKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHK 136
             +  D+ E++       D  VVW+ +EIEAISSLFQ RIPQKP K +R RPLPLP PHK
Sbjct: 83  -LVIDDDDEQVQESVNDDDDAVVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHK 142

Query: 137 LRPPRLPNPKIRPTTVVSSRAL--LSKQVYKRPDFLIGLAREIRDL-SPEENVSKVLNRW 196
           LRP  LP PK     ++ S AL  +SKQVYK P FLIGLAREI+ L S + +VS VLN+W
Sbjct: 143 LRPLGLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKW 202

Query: 197 GPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKV 256
             FL+KGSLS TI+ELGHMGLP+RAL T+ WA++   L PD+R+LAST++VL+++HELK+
Sbjct: 203 VSFLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL 262

Query: 257 PVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGK 316
              L+    LAS+ V+EAM++G I GG LNLA KL++ +K   R+LD SVYVK+ILE+ K
Sbjct: 263 ---LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAK 322

Query: 317 NPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSI 376
           NPDK  LV+ LLEEL +RE LKL+QQDCT+I+K+C +LG+FE+ E L+ W+  S  EPS+
Sbjct: 323 NPDKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSV 382

Query: 377 VMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAK 436
           VMYT ++HSRYS++KYREA+S+VWEME  NC  DLPAY VVIKLFVAL DL RA+RY++K
Sbjct: 383 VMYTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSK 442

Query: 437 LKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQITSMLLQAKR 490
           LKEAGFSPTY++YR+MI++Y  SGRL KCKEI KE E+AG  +DK  +  LLQ ++
Sbjct: 443 LKEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479

[Close]

BLAST of CsGy1G014140 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-13
Identity = 72/290 (24.83%), Postives = 126/290 (43.45%), Query Frame = 0


Query: 197 LQKGSLSLTIKELGHMGLPDRALNTFCW---AQEQHRLFPDDRVLASTVEVLSRNHELKV 256
           L +  L   +K L   G  +RA+  F W   +     L  D +V+   V +L R  +  V
Sbjct: 134 LLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSV 193

Query: 257 ------PVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPS---VY 316
                  + L+E+  L        ++  + R G    A  L    K+    + PS   V 
Sbjct: 194 AAKLLDKIPLQEY--LLDVRAYTTILHAYSRTGKYEKAIDLFERMKE----MGPSPTLVT 253

Query: 317 VKLILEL-GKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSW 376
             +IL++ GK       +L +L+E+ + + LK ++  C+T++  C R G    A++ ++ 
Sbjct: 254 YNVILDVFGKMGRSWRKILGVLDEM-RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 313

Query: 377 YVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGD 436
               G+EP  V Y AL+        Y EALS++ EME  +CP D   Y+ ++  +V  G 
Sbjct: 314 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 373

Query: 437 LSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAG 474
              A      + + G  P    Y  +I  Y  +G+  +  +++   + AG
Sbjct: 374 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416

[Close]

BLAST of CsGy1G014140 vs. ExPASy Swiss-Prot
Match: Q66GP4 (Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g13770 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.6e-11
Identity = 61/237 (25.74%), Postives = 108/237 (45.57%), Query Frame = 0


Query: 257 LEEFTKLASRGVLEA------MMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILE 316
           LE   ++  +G+ E+      ++R F     + +  KL   A   K + DP + +K++L 
Sbjct: 268 LEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM 327

Query: 317 LGKNPDKNMLVLTLLEELGQREALKLNQQDC--TTIVKVCTRLGKFEIAEKLYSWYVESG 376
             +  +      T LE +      +L   DC    IV   ++   F  A K+Y W ++  
Sbjct: 328 YVREGNME----TTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEE 387

Query: 377 HEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAV 436
            E   V Y   +++     KY +A  L  EM        + AYS ++ ++     LS AV
Sbjct: 388 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 447

Query: 437 RYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDK-QITSML 485
           R  AK+K+ G  P   +Y ++I ++  +  L + ++I+KE + A  + DK   TSM+
Sbjct: 448 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMI 500

[Close]

BLAST of CsGy1G014140 vs. ExPASy Swiss-Prot
Match: Q8GZ63 (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX=3702 GN=At5g25630 PE=2 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 6.1e-11
Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 0


Query: 342 TTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMES 401
           T ++ V    G+   A+ ++    E+GH PS++ YT L+ +    ++Y    S+V E+E 
Sbjct: 49  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108

Query: 402 GNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAK 461
                D   ++ VI  F   G++  AV+   K+KE G +PT + Y  +I  Y ++G+  +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168

Query: 462 CKEI 466
             E+
Sbjct: 169 SSEL 172

[Close]

BLAST of CsGy1G014140 vs. ExPASy Swiss-Prot
Match: Q9ZUA2 (Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana OX=3702 GN=At2g01740 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 8.8e-10
Identity = 50/210 (23.81%), Postives = 90/210 (42.86%), Query Frame = 0


Query: 276 FIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALK 335
           F + G L LA K   + K+    L P+V     L  G     ++ V   L +  +R  + 
Sbjct: 173 FCKSGELQLALKSFHSMKRD--ALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS 232

Query: 336 LNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSL 395
           LN    T ++    + G+ + AE++YS  VE   EP+ ++YT ++   +       A+  
Sbjct: 233 LNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKF 292

Query: 396 VWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLV 455
           + +M +     D+ AY V+I      G L  A      ++++   P   ++  M+  Y  
Sbjct: 293 LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK 352

Query: 456 SGRLAKCKEIYKEAENAGFMMDKQITSMLL 486
           SGR+     +Y +    GF  D    S ++
Sbjct: 353 SGRMKAAVNMYHKLIERGFEPDVVALSTMI 380

[Close]

BLAST of CsGy1G014140 vs. NCBI nr
Match: XP_004139567.1 (pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >XP_011654198.1 pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >XP_031739920.1 pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >XP_031739926.1 pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >KGN64877.1 hypothetical protein Csa_022712 [Cucumis sativus])

HSP 1 Score: 966 bits (2496), Expect = 0.0
Identity = 488/489 (99.80%), Postives = 488/489 (99.80%), Query Frame = 0


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF
Sbjct: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKV VNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA
Sbjct: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480

Query: 481 TSMLLQAKR 489
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of CsGy1G014140 vs. NCBI nr
Match: XP_008462173.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_008462181.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_008462189.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_016902994.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_016902996.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo])

HSP 1 Score: 917 bits (2369), Expect = 0.0
Identity = 465/489 (95.09%), Postives = 475/489 (97.14%), Query Frame = 0


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           M SIVSATSVSSILVKGNGGIGCQ TMVHFKANSRRRPPKNLLCPRRAKLPP+PAVNQF 
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSP FTDLISSKIFQDEHEEIHA+DYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTT VSSRALLSK+VYKRPDFLIGLAR IRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRAL TFCW QEQ RLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFI+GGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKN+LVLTLLEELGQREALKLNQQD TTI+KVCTRL KFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           Y WYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEMES NCPFDLPAY+VVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTY+VYRNMITIYLVSGRLAK KEIYKEAENAGF+MDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480

Query: 481 TSMLLQAKR 489
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of CsGy1G014140 vs. NCBI nr
Match: XP_038893977.1 (pentatricopeptide repeat-containing protein At2g01860 [Benincasa hispida] >XP_038893978.1 pentatricopeptide repeat-containing protein At2g01860 [Benincasa hispida])

HSP 1 Score: 866 bits (2237), Expect = 4.66e-315
Identity = 443/495 (89.49%), Postives = 465/495 (93.94%), Query Frame = 0


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MDSI SATSVSSILVKGNGGIGCQ TM HFK NSRRR PKNLLCPRRAKLPP+PAVNQF 
Sbjct: 1   MDSIFSATSVSSILVKGNGGIGCQATMAHFKTNSRRRLPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPPFTDLISSKIFQ------DEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQG 120
            NKTSAPSP  TDLISS+IFQ      DEHEEIHA+DY KDTDVVWDSDEIEAISSLFQG
Sbjct: 61  KNKTSAPSPSLTDLISSEIFQLPKGEDDEHEEIHAYDY-KDTDVVWDSDEIEAISSLFQG 120

Query: 121 RIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLA 180
           RIPQKPGKLNR+RPLPLPLPHKLRP  LP+PKIRP  +VSSRALLSKQVYKRPDFLIGLA
Sbjct: 121 RIPQKPGKLNRDRPLPLPLPHKLRPSGLPDPKIRPRIMVSSRALLSKQVYKRPDFLIGLA 180

Query: 181 REIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPD 240
           R IRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRAL TF WAQEQ RLFPD
Sbjct: 181 RAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFSWAQEQPRLFPD 240

Query: 241 DRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKK 300
           DRVLASTVEVL+RNHELKVP++LEEFTKLASRGVLEAM+RGFI+GGSLNLAWKLLVAAKK
Sbjct: 241 DRVLASTVEVLARNHELKVPLDLEEFTKLASRGVLEAMVRGFIKGGSLNLAWKLLVAAKK 300

Query: 301 GKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKF 360
            KR+LDPSVYVKLILELGKNPDKN+LVLTLL+ELGQREAL LNQQD TTI+KVCTRLGKF
Sbjct: 301 RKRLLDPSVYVKLILELGKNPDKNVLVLTLLDELGQREALTLNQQDTTTIIKVCTRLGKF 360

Query: 361 EIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVV 420
           EIAEKLYSWYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEME+ NCPFDLPAYSV+
Sbjct: 361 EIAEKLYSWYVESGHEPSVVMYTALVHSRYSDRKYREALSLVWEMEAANCPFDLPAYSVM 420

Query: 421 IKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGF 480
           IKLFV LGDLSRAVRYFAKLKEAGF+PTY+VYR MITIYLVSGRLAKCKEIYKEAENAGF
Sbjct: 421 IKLFVTLGDLSRAVRYFAKLKEAGFAPTYDVYRKMITIYLVSGRLAKCKEIYKEAENAGF 480

Query: 481 MMDKQITSMLLQAKR 489
           +MDKQITSMLLQ+KR
Sbjct: 481 IMDKQITSMLLQSKR 494

[Close]

BLAST of CsGy1G014140 vs. NCBI nr
Match: KAA0052071.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK00686.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 860 bits (2222), Expect = 3.45e-312
Identity = 435/457 (95.19%), Postives = 444/457 (97.16%), Query Frame = 0


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           M SIVSATSVSSILVKGNGGIGCQ TMVHFKANSRRRPPKNLLCPRRAKLPP+PAVNQF 
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSP FTDLISSKIFQDEHEEIHA+DYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTT VSSRALLSK+VYKRPDFLIGLAR IRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRAL TFCW QEQ RLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFI+GGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKN+LVLTLLEELGQREALKLNQQD TTI+KVCTRL KFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           Y WYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEMES NCPFDLPAY+VVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSG 457
           LGDLSRAVRYFAKLKEAGFSPTY+VYRNMITIYLVSG
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSG 457

[Close]

BLAST of CsGy1G014140 vs. NCBI nr
Match: KAG7020726.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 791 bits (2042), Expect = 2.98e-285
Identity = 403/501 (80.44%), Postives = 441/501 (88.02%), Query Frame = 0


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MDS+ S T++SSILVK NGGI CQ  + HF+ NSRRRPPKNLL PRR KLPP+P VNQF 
Sbjct: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  NNKTSAPSPP--FTDLISSKIFQ------DEHEEIHAHDY----TKDTDVVWDSDEIEAI 120
             +TS P P   F DLISS+         DE EE  A +Y      D+DVVWDS+EIEAI
Sbjct: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120

Query: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPD 180
           +SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQ 240
           FLIGLAR IRDL PEEN+SKVLNRW PFLQKGSLSLTIKELGHMGL DRAL TFCW QEQ
Sbjct: 181 FLIGLARAIRDLKPEENMSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 HRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKL 300
            RL+PDDRVLASTVEVL+RNHELK+P NL+EFTKLASRGVLEAMMRGFI+GG L+LAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVC 360
           LVAAK GKRMLDPSVYVKLILE+GKNPDKNMLVL LL+ELGQREAL LNQQD + I+KV 
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDL 420
           TRLGKFEIAE+LYSWYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+ NCPFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420

Query: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKE 480
           PAYSVV+KLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAKCKEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGFMMDKQITSMLLQAKR 489
           AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of CsGy1G014140 vs. ExPASy TrEMBL
Match: A0A0A0LVM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G144300 PE=4 SV=1)

HSP 1 Score: 966 bits (2496), Expect = 0.0
Identity = 488/489 (99.80%), Postives = 488/489 (99.80%), Query Frame = 0


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF
Sbjct: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKV VNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA
Sbjct: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480

Query: 481 TSMLLQAKR 489
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of CsGy1G014140 vs. ExPASy TrEMBL
Match: A0A1S3CGD0 (pentatricopeptide repeat-containing protein At2g01860 OS=Cucumis melo OX=3656 GN=LOC103500594 PE=4 SV=1)

HSP 1 Score: 917 bits (2369), Expect = 0.0
Identity = 465/489 (95.09%), Postives = 475/489 (97.14%), Query Frame = 0


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           M SIVSATSVSSILVKGNGGIGCQ TMVHFKANSRRRPPKNLLCPRRAKLPP+PAVNQF 
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSP FTDLISSKIFQDEHEEIHA+DYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTT VSSRALLSK+VYKRPDFLIGLAR IRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRAL TFCW QEQ RLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFI+GGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKN+LVLTLLEELGQREALKLNQQD TTI+KVCTRL KFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           Y WYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEMES NCPFDLPAY+VVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTY+VYRNMITIYLVSGRLAK KEIYKEAENAGF+MDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480

Query: 481 TSMLLQAKR 489
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of CsGy1G014140 vs. ExPASy TrEMBL
Match: A0A5D3BQZ3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00260 PE=4 SV=1)

HSP 1 Score: 860 bits (2222), Expect = 1.67e-312
Identity = 435/457 (95.19%), Postives = 444/457 (97.16%), Query Frame = 0


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           M SIVSATSVSSILVKGNGGIGCQ TMVHFKANSRRRPPKNLLCPRRAKLPP+PAVNQF 
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSP FTDLISSKIFQDEHEEIHA+DYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTT VSSRALLSK+VYKRPDFLIGLAR IRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRAL TFCW QEQ RLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFI+GGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360
           PSVYVKLILELGKNPDKN+LVLTLLEELGQREALKLNQQD TTI+KVCTRL KFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420
           Y WYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEMES NCPFDLPAY+VVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSG 457
           LGDLSRAVRYFAKLKEAGFSPTY+VYRNMITIYLVSG
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSG 457

[Close]

BLAST of CsGy1G014140 vs. ExPASy TrEMBL
Match: A0A6J1GIP2 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454537 PE=4 SV=1)

HSP 1 Score: 788 bits (2035), Expect = 1.68e-284
Identity = 403/501 (80.44%), Postives = 440/501 (87.82%), Query Frame = 0


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MDS+ S T++SSILVK NGGI CQ  + HF+ NSRRRPPKNLL PRR KLPP+P VNQF 
Sbjct: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  NNKTSAPSPP--FTDLISSKIFQ------DEHEEIHAHDY----TKDTDVVWDSDEIEAI 120
             +TS P P   F DLISS+         DE EE  A +Y      D+DVVWDS+EIEAI
Sbjct: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120

Query: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPD 180
           +SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQ 240
           FLIGLAR IRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRAL TFCW QEQ
Sbjct: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 HRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKL 300
            RL+PDDRVLASTVEVL+RNHELK+P NL+EFTKLASRGVLEAMMRGFI+GG L+LAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVC 360
           LVAAK GKRMLDPSVYVKLILE+GKNPDKNMLVL LL+ELGQREAL LNQQD + I+KV 
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDL 420
           TRLGKFEIAE+LYSWYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+ N PFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420

Query: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKE 480
           PAYSVV+KLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAKCKEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGFMMDKQITSMLLQAKR 489
           AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of CsGy1G014140 vs. ExPASy TrEMBL
Match: A0A6J1KK31 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495984 PE=4 SV=1)

HSP 1 Score: 783 bits (2023), Expect = 1.13e-282
Identity = 401/501 (80.04%), Postives = 438/501 (87.43%), Query Frame = 0


Query: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
           MDS+ S T+VSSILVK NGGI CQ  M HF  NS+RRPPKNLL PRR KLPP+P VNQF 
Sbjct: 1   MDSLFSTTAVSSILVKRNGGISCQIPMAHFLTNSKRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  NNKTSAPSPP--FTDLISSKIFQ------DEHEEIHAHDY----TKDTDVVWDSDEIEAI 120
             +TS P P   + DLI S+         DE EE  A +Y      D+D+VWD +EIEAI
Sbjct: 61  KKRTSDPHPDTSYPDLIPSEKIGLPEEELDELEETAADNYFANDDNDSDIVWDPEEIEAI 120

Query: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPD 180
           +SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQ 240
           FLIGLAR IRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRAL TFCW QEQ
Sbjct: 181 FLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 HRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKL 300
            RL+PDDRVLASTVEVL+RNHELK+P NL+EFTKLASRGVLEAMMRGFI+GG L+LAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVC 360
           LVAAK GKRMLDPSV+VKLILE+GKNPDKNMLVL LL+ELGQREAL L+QQD + I+KV 
Sbjct: 301 LVAAKNGKRMLDPSVHVKLILEIGKNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVS 360

Query: 361 TRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDL 420
           TRLGKFEIAEKLYSWYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+ NCPFDL
Sbjct: 361 TRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420

Query: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKE 480
           PAYSVVIKLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAKCKEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGFMMDKQITSMLLQAKR 489
           AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of CsGy1G014140 vs. TAIR 10
Match: AT2G01860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 500.7 bits (1288), Expect = 1.3e-141
Identity = 266/476 (55.88%), Postives = 341/476 (71.64%), Query Frame = 0


Query: 17  GNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFFNNKTSAPSPPFTDLIS 76
           GN G+   N     + N  ++  KNL  PRR KLPP+  VN F       P         
Sbjct: 23  GNIGVTRVNAS---QRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEP--------- 82

Query: 77  SKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHK 136
             +  D+ E++       D  VVW+ +EIEAISSLFQ RIPQKP K +R RPLPLP PHK
Sbjct: 83  -LVIDDDDEQVQESVNDDDDAVVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHK 142

Query: 137 LRPPRLPNPKIRPTTVVSSRAL--LSKQVYKRPDFLIGLAREIRDL-SPEENVSKVLNRW 196
           LRP  LP PK     ++ S AL  +SKQVYK P FLIGLAREI+ L S + +VS VLN+W
Sbjct: 143 LRPLGLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKW 202

Query: 197 GPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLASTVEVLSRNHELKV 256
             FL+KGSLS TI+ELGHMGLP+RAL T+ WA++   L PD+R+LAST++VL+++HELK+
Sbjct: 203 VSFLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL 262

Query: 257 PVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGK 316
              L+    LAS+ V+EAM++G I GG LNLA KL++ +K   R+LD SVYVK+ILE+ K
Sbjct: 263 ---LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAK 322

Query: 317 NPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSWYVESGHEPSI 376
           NPDK  LV+ LLEEL +RE LKL+QQDCT+I+K+C +LG+FE+ E L+ W+  S  EPS+
Sbjct: 323 NPDKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSV 382

Query: 377 VMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAVRYFAK 436
           VMYT ++HSRYS++KYREA+S+VWEME  NC  DLPAY VVIKLFVAL DL RA+RY++K
Sbjct: 383 VMYTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSK 442

Query: 437 LKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQITSMLLQAKR 490
           LKEAGFSPTY++YR+MI++Y  SGRL KCKEI KE E+AG  +DK  +  LLQ ++
Sbjct: 443 LKEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479

[Close]

BLAST of CsGy1G014140 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 9.3e-15
Identity = 72/290 (24.83%), Postives = 126/290 (43.45%), Query Frame = 0


Query: 197 LQKGSLSLTIKELGHMGLPDRALNTFCW---AQEQHRLFPDDRVLASTVEVLSRNHELKV 256
           L +  L   +K L   G  +RA+  F W   +     L  D +V+   V +L R  +  V
Sbjct: 134 LLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSV 193

Query: 257 ------PVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLDPS---VY 316
                  + L+E+  L        ++  + R G    A  L    K+    + PS   V 
Sbjct: 194 AAKLLDKIPLQEY--LLDVRAYTTILHAYSRTGKYEKAIDLFERMKE----MGPSPTLVT 253

Query: 317 VKLILEL-GKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKLYSW 376
             +IL++ GK       +L +L+E+ + + LK ++  C+T++  C R G    A++ ++ 
Sbjct: 254 YNVILDVFGKMGRSWRKILGVLDEM-RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 313

Query: 377 YVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGD 436
               G+EP  V Y AL+        Y EALS++ EME  +CP D   Y+ ++  +V  G 
Sbjct: 314 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 373

Query: 437 LSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAG 474
              A      + + G  P    Y  +I  Y  +G+  +  +++   + AG
Sbjct: 374 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416

[Close]

BLAST of CsGy1G014140 vs. TAIR 10
Match: AT5G13770.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-12
Identity = 61/237 (25.74%), Postives = 108/237 (45.57%), Query Frame = 0


Query: 257 LEEFTKLASRGVLEA------MMRGFIRGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILE 316
           LE   ++  +G+ E+      ++R F     + +  KL   A   K + DP + +K++L 
Sbjct: 268 LEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM 327

Query: 317 LGKNPDKNMLVLTLLEELGQREALKLNQQDC--TTIVKVCTRLGKFEIAEKLYSWYVESG 376
             +  +      T LE +      +L   DC    IV   ++   F  A K+Y W ++  
Sbjct: 328 YVREGNME----TTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEE 387

Query: 377 HEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVALGDLSRAV 436
            E   V Y   +++     KY +A  L  EM        + AYS ++ ++     LS AV
Sbjct: 388 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 447

Query: 437 RYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDK-QITSML 485
           R  AK+K+ G  P   +Y ++I ++  +  L + ++I+KE + A  + DK   TSM+
Sbjct: 448 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMI 500

[Close]

BLAST of CsGy1G014140 vs. TAIR 10
Match: AT5G25630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 4.3e-12
Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 0


Query: 342 TTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMES 401
           T ++ V    G+   A+ ++    E+GH PS++ YT L+ +    ++Y    S+V E+E 
Sbjct: 49  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108

Query: 402 GNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAK 461
                D   ++ VI  F   G++  AV+   K+KE G +PT + Y  +I  Y ++G+  +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168

Query: 462 CKEI 466
             E+
Sbjct: 169 SSEL 172

[Close]

BLAST of CsGy1G014140 vs. TAIR 10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 4.3e-12
Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 0


Query: 342 TTIVKVCTRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMES 401
           T ++ V    G+   A+ ++    E+GH PS++ YT L+ +    ++Y    S+V E+E 
Sbjct: 49  TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108

Query: 402 GNCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAK 461
                D   ++ VI  F   G++  AV+   K+KE G +PT + Y  +I  Y ++G+  +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168

Query: 462 CKEI 466
             E+
Sbjct: 169 SSEL 172

The following BLAST results are available for this feature:

BLAST of CsGy1G014140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XET4	1.8e-140	55.88	Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana OX...	[more]
O64624	1.3e-13	24.83	Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop...	[more]
Q66GP4	3.6e-11	25.74	Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidop...	[more]
Q8GZ63	6.1e-11	28.23	Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX...	[more]
Q9ZUA2	8.8e-10	23.81	Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsGy1G014140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139567.1	0.0	99.80	pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >XP_0116...	[more]
XP_008462173.1	0.0	95.09	PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] ...	[more]
XP_038893977.1	4.66e-315	89.49	pentatricopeptide repeat-containing protein At2g01860 [Benincasa hispida] >XP_03...	[more]
KAA0052071.1	3.45e-312	95.19	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK00686...	[more]
KAG7020726.1	2.98e-285	80.44	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of CsGy1G014140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVM0	0.0	99.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G144300 PE=4 SV=1	[more]
A0A1S3CGD0	0.0	95.09	pentatricopeptide repeat-containing protein At2g01860 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3BQZ3	1.67e-312	95.19	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1GIP2	1.68e-284	80.44	pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1KK31	1.13e-282	80.04	pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita ma...	[more]

BLAST of CsGy1G014140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01860.1	1.3e-141	55.88	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G18940.1	9.3e-15	24.83	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G13770.1	2.5e-12	25.74	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G25630.1	4.3e-12	28.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G25630.2	4.3e-12	28.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 308..489 e-value: 1.0E-25 score: 92.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 172..296 e-value: 3.8E-5 score: 25.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 410..442 e-value: 0.001 score: 17.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 395..452 e-value: 0.0018 score: 18.3 coord: 330..380 e-value: 0.012 score: 15.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 337..371 score: 8.812943
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 407..441 score: 9.985802
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..148
None	No IPR available	PANTHER	PTHR46128	MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1	coord: 69..464
None	No IPR available	PANTHER	PTHR46128:SF179	TETRATRICOPEPTIDE REPEAT-LIKE SUPERFAMILY PROTEIN	coord: 69..464

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G014140.2	CsGy1G014140.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding