CsGy1G013840 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G013840
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	50S ribosomal protein L19, chloroplastic-like
Location	Gy14Chr1: 9452593 .. 9457540 (-)
RNA-Seq Expression	CsGy1G013840
Synteny	CsGy1G013840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTCGTAAAATCAAAATAACTCTTTCATCATCATCGTTTTCTTCTTCTTCTTCTTCATCTTCACGCCGTCTCCTCCTCTGTTTCAGCAGATCGGTTTCGCCGCCGCCGTCGTCTTTCTTACGCTCGTGCTGTCGAGCCCTCTTTTCCAGCGGTTTTGCACTGATTTCTTACTCCTTTGTTGTCACTGGTATTCTCCCAATCTTCATCTGCGTTTTCTCTGTCAATTGAAAACACACGAGTTTGAACTTGTCTAATGAAACAGTGGAAGAGTTGTTTGTTTTCTTTAATAACAAAATTGAAACGTGGTTTGTATTTGGCTGATCTGATTTGGACGTGAATCAATCATCCAGTGCTCTACTTTCTTTTTCTTTTTTGGTTCTGTTTTTCGAATTTCTTGTTTACTGGTGATCTAGGATAAGCTGACATTTCCAGAAATCTTGATCAGTGCAATGTATATTTAAGCTACATTATTTATACGCTGCTTCACTTCCATCATGTTTCTTCTCACCTGCTTGTTTTGTAACAATTCTATGGAGATTGTTTTATATTACTCAACGCTCATGGAGTTTCTGTGGATAATGCAGCTGGAAATCTAGTGCGAAAATGCAAGGTTTTCGCAGAATTAATCAATTGGTACGAAGGCAAATTCCTGATGCTAATTTCAAATTGATTAGAGGTTATCCTCTGAATGGGGATGCTGGCTGTAGCTGCTCGGCCCCAATGTCGATGGAAAACAGTTTTACTATTCCTTATCTTTTTGGGAAGTCATATGGGTCTTTGTGTGGTTCCTTCTTGAGGTCTTTCTCGAGGTCGGGCAATCAATATCCGGAAGCCTTCGTATGTATTTTTGTTCGTATACCTACTTTTCATCTTAGGTCGTTTACTAGTATGTTTCATTCTTGTGTTGTTTTGGGAGGTTCTATAACTATTCAGTAAATTCACTTTGGTTCATACTGCATATATAATTAATGACATTTAGTCTAGTTCAAATTGGAAGCTTTTATGAGTTTGTGCTTAATGTTTTAATTCATAAGTAGCGAGACAAGTAAATCTCGTGATATTGGTATTGGTATTGGCCAACACCTGACTGGTGGTTGGGGAGAGGGTAATATGTACAGTATTTGATCAATTATGTGTGTTATGAACATGCCTCTAATACTGACCAGACGTTATATGTGCTGAACGTCTTATTGCTATAAAGTAACGTAGAGTATGAATACATGAGCTAGAACTGGCTCTTGAACTTAATTATGGATCTGAGTCATTTGGTGTACCTGTGGGAATGCCTGCTCTCAAATTACCTTTTAGGTGGCAATTCTTTTTTGGGGGGTTATTGGGGGGATGGGTGTTCTTTGTTGGAGGGAAAGTGGTTTTGGAGTCCGCTTTTTTGGGAGAGGAGTGTTGTGGCAAGCAAGCTTCTTTGCTATTTTGTGGAGTATTTGGTTGGAGTGCAATAGTAGAATTTTTAGGGATGTGGAGAAATCTAGAGAGGTAGTTTGGTAGTTGGTGAGGACTGAAGTCTAATGCTTCCATTTGAGTTTCATTCACTAGATTGTTTTGTAATCATGATATTGATCTTGTTCTCTTGGATTGGATTTTTTTTTTTTTTTTTTTTTTTTGTAGCTTGTGTTGGTCTCTTGTTTTCAGGAGCTTTTTTTCCTTTTATTCTTTCATTTTTTCAATGTAAGGTTTTTGTGTCAAAAAAAATAAAAAACATAAACTTTACAATTATTGTCTTGTCTTAGACTCTTATTTATTATGTATATGATAGAACACCAAGAAGCTGTGTTCGTAATATATTGATATAAACTTTACAATTACAAGAGGAAATTGATAATCTCAATTCGGAATTGAGAATTGTAGAAAAACTAAGAACATAATAAAAAGAAACTACCCTCTCTGCCTTTCCTCTCTCTCAATGAAGTTTTGCAAAAATCCTTCACAAAATGATCCCCCTTCTCCGTGCCTGCAACTTCTCTATTTCACTCATTTTTCTCTGGCTAACTGTGGTCTCACCACTGTGGGACCCTTAGTGCTCACTCTCCCACTCGCACGTATGCTATCATTCTTCCCTTTCCTGCTATATTTAAATACAATTGGAGGTCTAACAATATCCTATTTTCCCTCTCAACAAAATATGTGTAGAGAACCACCTATTTATTCTGTAAGTAGTCTGTCTAAGCTGTATTTAGCTTGCGTCAAGCTGATGTAACTTTTCTAGGAAAACAATGTGGTTATAGTTCTTTTCTTCTATGATCCTTGATAATTGGTGCCTTTCTGTAATTTCCTTGCCATCATTGGAGATTGGTTATCTTCCTCTTATCTACCTCTTTTCTTTCAATGTTGCTGAAAATTAGAAAAAACTGTCAACTATCCTTGTGAGAATTTTTTTCAGAAACTGTGTATATCGGTACTCGTTGAGAAAGACAATATGCAAATGTTTTCTTTCATTGTTGCTGAAACTTAGCTTGCTATTGGTTTTTGGGTACTCATTGGAAGCAATATCTATTCATTAAGAGTCTGTTTTGTAACGTATCACTTTATAACAATTTACATCAATATTTAACAGAAAAATATGAGCTCTCAAATGGAATTTGTGCCTTTGAGAAAACATGCATCTTCAACTTTTTCAGCATTCCAAAGTTCTAGGCCACATTTTTTTCAGTTGGCAGAAACTGCAGCTCCTTTTTCTAGTAGGGGCATTGCTACGACAAGCTCGATGGAATCAGCTCTACAGGGATCCCCTGCAGTTGATTCTGTTATACCACCTCGCATCAAATTTAAGAGGCTTGATAAAACCTCAAGACACATAATGCAGGTATTCACATTTCTGAGTATTGTTGGAAAAGAATTAATTTCACCTCATCTTCCCTTCTGTATGCTTTCAATACATTGCTTTCTTCTACTCACAGATTTTAGATAAGGAAGCTGTTGAGGAGGTAAAAGCACGAAGAGAAATTCCAGATATAAAGCCAGGCTATATTGTGCAGCTCAAAGTGGTAGAGTTCATTACTCGTATTCTTTCATTATTTTTCTCTATGAAAGTACTTGTCTGTATAAAAAGAAGGGTAGAGTTCATTTCAGTCAAATCATATCATGTTGTTTCATTACCTTTAGACGTTTTTAATACCTAAAGGCAGTTGTAGATGAGTTTATTGAACAGCTTTTGGCTTTTGAACAGGAAGTACCTGAGAACAAGCGACGTATCTCAACATTGAAAGGTATTGTGATAGCCAGACGAAATGCCGGTCTAAACTCAACTTTTAGAATAAGGAGGGTAGTTGCTGGTGTTGGGATTGAGTCCCTCTTTCCTCTGTAAGTATTGCTGATTTTTTTATGTAATTATTTTCTGCAAACGCTACATTCCTAATTTGATTGTCTTTGGCCCTGCTCACCTTTGTGATGAAGAACTGAAGAATTGTGTATCCGGGAAAAAGGACTCGGATACATCTAGACATTCACCTGACACGTATCTGGGACACTAAAAAATGTTTCAAGATTATTATTATGATTATTATTTTCCTAATTTTGGACACGTCTTTCAAAAATATTTAACCTAGAAATGGGGTGGGGGTGGGGGTGGGAATGGAGATTTTATGATAGACTTTATCCATAAATATTGAATTATTGATCCATCCTAAAGTATTAGGACGACCTTTTCTTTCTTTGGTCACTGCCAACTAAAATTTCTACATCTTTTAAGATTTCAATATGATTAAATGACTAAACTTTTTATATTTGTATGATAAATTTATGTACTTTTATCTATAAAGCAGTGTCAATACTTCACGTATTTTATTTCATAAAGCGTGTCTGCAACATGTATGTGTCCTATTTTCTAGAAATTGACATGTCACCATGCATGTCTGTCATCTTTGTGCTTCTTAAAAATTTAATACAAATCATTAACCTTAAGGTGCAAATCTTTATGAATTTGAGTCTTAAATATAATTGGATTTTTAAACTGAAAACAAAGCCATCCTGTCGATCCAAACCAATATTAAAGTGAACTGACAGTGGTTTCGGTCAGTTTATTTCGGCTTTTAGAGTTTTTTGGTTTTCCCTTCACCCTTGATTCTAGTAAAATTGTATATGGTGATTGGTGAACAATACTTATTGAATGTTATGTATTAATATGGACATATATATGTATGGTCTTTCTCTATACAGTTGTTTCTTTAAATGATACTCGCCTCTGATAACTTTGTGCTTCTGACTAAAATAAGTGGTTTGTGCATGACAGATACTCACCGAACATAAAAGAGATTAAGGTATTGGAGAAGAAGAAAGTGCGCAGAGCTAAGCTTTACTATCTTAGGGACAAAATGAACGCGCTTAAGAAGCAGTAGCAAGTTTTCTATTCAATGGGATCAGAAGTGTTTCCGTAACATGGTGCGTTTAAATCCTTTTGAGCGAAAAATCTCACGAGCTTTCATGATTATTTTATCCTGTTTTATGCATGGAGGATCAGCGTGATAAACTAGTGGAGCTAAAATAAGAATAAACAAAAATGACTTCGCATCGATTGCCTCGAGAAGAAAATGTTCTTTCTTTTGTATGATTAGTTGCTCAAGCAAACCGTGTCATCATTTATCTTTTTGTTGGTCGGTTGCCGGATTTTGCCCCTTCCTTGAAATGCCAAAGAGCTTTCTGTTTATAATGTCTGTGGCTGATGAAATCTTCTTTTTGAACTAAGGATATATTTATTACTTTATCATTAACAGGGTTTCCATTCCTTACAAACCTTCCCCGTGCTGTTCATTTTAAATAGATGAAGTGTAGGGCTCAGGCTGTAAACTGCATTATTGGTCGGCAAATTTGTTGGACGAGTTGTATAATATTCTTAGCAGCTTATCCTTGGAGAAAATACCTATCTAGTACTGTGTATCTCTTCATTTAACAATTGTGTAGGACCATAGGTTAAAATAATACAATGTCTAATTCTA

mRNA sequence

CATTTCGTAAAATCAAAATAACTCTTTCATCATCATCGTTTTCTTCTTCTTCTTCTTCATCTTCACGCCGTCTCCTCCTCTGTTTCAGCAGATCGGTTTCGCCGCCGCCGTCGTCTTTCTTACGCTCGTGCTGTCGAGCCCTCTTTTCCAGCGGTTTTGCACTGATTTCTTACTCCTTTGTTGTCACTGCTGGAAATCTAGTGCGAAAATGCAAGGTTTTCGCAGAATTAATCAATTGGTACGAAGGCAAATTCCTGATGCTAATTTCAAATTGATTAGAGGTTATCCTCTGAATGGGGATGCTGGCTGTAGCTGCTCGGCCCCAATGTCGATGGAAAACAGTTTTACTATTCCTTATCTTTTTGGGAAGTCATATGGGTCTTTGTGTGGTTCCTTCTTGAGGTCTTTCTCGAGGTCGGGCAATCAATATCCGGAAGCCTTCTTGGCAGAAACTGCAGCTCCTTTTTCTAGTAGGGGCATTGCTACGACAAGCTCGATGGAATCAGCTCTACAGGGATCCCCTGCAGTTGATTCTGTTATACCACCTCGCATCAAATTTAAGAGGCTTGATAAAACCTCAAGACACATAATGCAGATTTTAGATAAGGAAGCTGTTGAGGAGGTAAAAGCACGAAGAGAAATTCCAGATATAAAGCCAGGCTATATTGTGCAGCTCAAAGTGGAAGTACCTGAGAACAAGCGACGTATCTCAACATTGAAAGGTATTGTGATAGCCAGACGAAATGCCGGTCTAAACTCAACTTTTAGAATAAGGAGGGTAGTTGCTGGTGTTGGGATTGAGTCCCTCTTTCCTCTATACTCACCGAACATAAAAGAGATTAAGGTATTGGAGAAGAAGAAAGTGCGCAGAGCTAAGCTTTACTATCTTAGGGACAAAATGAACGCGCTTAAGAAGCAGTAGCAAGTTTTCTATTCAATGGGATCAGAAGTGTTTCCGTAACATGGTGCGTTTAAATCCTTTTGAGCGAAAAATCTCACGAGCTTTCATGATTATTTTATCCTGTTTTATGCATGGAGGATCAGCGTGATAAACTAGTGGAGCTAAAATAAGAATAAACAAAAATGACTTCGCATCGATTGCCTCGAGAAGAAAATGTTCTTTCTTTTGTATGATTAGTTGCTCAAGCAAACCGTGTCATCATTTATCTTTTTGTTGGTCGGTTGCCGGATTTTGCCCCTTCCTTGAAATGCCAAAGAGCTTTCTGTTTATAATGTCTGTGGCTGATGAAATCTTCTTTTTGAACTAAGGATATATTTATTACTTTATCATTAACAGGGTTTCCATTCCTTACAAACCTTCCCCGTGCTGTTCATTTTAAATAGATGAAGTGTAGGGCTCAGGCTGTAAACTGCATTATTGGTCGGCAAATTTGTTGGACGAGTTGTATAATATTCTTAGCAGCTTATCCTTGGAGAAAATACCTATCTAGTACTGTGTATCTCTTCATTTAACAATTGTGTAGGACCATAGGTTAAAATAATACAATGTCTAATTCTA

Coding sequence (CDS)

ATGCAAGGTTTTCGCAGAATTAATCAATTGGTACGAAGGCAAATTCCTGATGCTAATTTCAAATTGATTAGAGGTTATCCTCTGAATGGGGATGCTGGCTGTAGCTGCTCGGCCCCAATGTCGATGGAAAACAGTTTTACTATTCCTTATCTTTTTGGGAAGTCATATGGGTCTTTGTGTGGTTCCTTCTTGAGGTCTTTCTCGAGGTCGGGCAATCAATATCCGGAAGCCTTCTTGGCAGAAACTGCAGCTCCTTTTTCTAGTAGGGGCATTGCTACGACAAGCTCGATGGAATCAGCTCTACAGGGATCCCCTGCAGTTGATTCTGTTATACCACCTCGCATCAAATTTAAGAGGCTTGATAAAACCTCAAGACACATAATGCAGATTTTAGATAAGGAAGCTGTTGAGGAGGTAAAAGCACGAAGAGAAATTCCAGATATAAAGCCAGGCTATATTGTGCAGCTCAAAGTGGAAGTACCTGAGAACAAGCGACGTATCTCAACATTGAAAGGTATTGTGATAGCCAGACGAAATGCCGGTCTAAACTCAACTTTTAGAATAAGGAGGGTAGTTGCTGGTGTTGGGATTGAGTCCCTCTTTCCTCTATACTCACCGAACATAAAAGAGATTAAGGTATTGGAGAAGAAGAAAGTGCGCAGAGCTAAGCTTTACTATCTTAGGGACAAAATGAACGCGCTTAAGAAGCAGTAG

Protein sequence

MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLCGSFLRSFSRSGNQYPEAFLAETAAPFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKKQ*

Homology

[Close]

BLAST of CsGy1G013840 vs. ExPASy Swiss-Prot
Match: P82413 (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 PE=1 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.6e-31
Identity = 87/207 (42.03%), Postives = 122/207 (58.94%), Query Frame = 0


Query: 39  PMSMENSFTIPYLFGKSYGSLCGSFLRSFSRSGNQYPEAFLAETAAP----FSSRGIATT 98
           P+  +  F I      S  S C S L     S N +   F +  + P    F  R  A  
Sbjct: 23  PLKKQLGFPIDSNRRFSLSSNCRSNLMVSRASSNLFSSNFSSIFSFPARNSFVVRSEAED 82

Query: 99  SSMESALQGSPAVDSVIPPRIKFKRLDKTSRH-------IMQILDKEAVEEVKARREIPD 158
           SS   A   +   +  +P   + +  ++  R        IM IL+K+AV   +  R +P 
Sbjct: 83  SSDAPAESVAVVAEEELPVESEAEAEERPPRQQRVKLGDIMGILNKKAVHAAEELRPVPG 142

Query: 159 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 218
           I+ G IVQ+++EVPENKRR+S  KGIVI+R+NAG+++T RIRR++AGVG+E +FPLYSPN
Sbjct: 143 IRTGDIVQIRLEVPENKRRLSVYKGIVISRQNAGIHTTIRIRRIIAGVGVEIVFPLYSPN 202

Query: 219 IKEIKVLEKKKVRRAKLYYLRDKMNAL 235
           IKEIKV+  +KVR+A+LYYLRDK+  L
Sbjct: 203 IKEIKVVSHRKVRKARLYYLRDKLPRL 229

[Close]

BLAST of CsGy1G013840 vs. ExPASy Swiss-Prot
Match: Q8W463 (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g17560 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-31
Identity = 75/159 (47.17%), Postives = 109/159 (68.55%), Query Frame = 0


Query: 76  EAFLAETAAPFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEA 135
           E F+AE A         T  ++E  ++  P       PRIK          +M IL+++A
Sbjct: 82  EEFVAEIA--------DTEGNVEEVVEAKP----TRKPRIKL-------GDVMGILNQKA 141

Query: 136 VEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGV 195
           +E  +  R +P+I+ G IV++K+EVPENKRR+S  KGIV++R+NAG+++T RIRR++AG+
Sbjct: 142 IEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGI 201

Query: 196 GIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNAL 235
           G+E +FP+YSPNIKEIKV+  +KVRRA+LYYLRDK+  L
Sbjct: 202 GVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 221

[Close]

BLAST of CsGy1G013840 vs. ExPASy Swiss-Prot
Match: Q8RXX5 (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g47190 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-31
Identity = 63/108 (58.33%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 127 IMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTF 186
           IM +L+K+A+E  +  R +P ++ G IV++K+EVPENKRR+S  KGIV++R+NAG+++T 
Sbjct: 118 IMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTI 177

Query: 187 RIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNAL 235
           RIRR++AG+G+E +FP+YSPNIKEIKV+  +KVRRA+LYYLRDK+  L
Sbjct: 178 RIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 225

[Close]

BLAST of CsGy1G013840 vs. ExPASy Swiss-Prot
Match: Q2VZV5 (50S ribosomal protein L19 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=rplS PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 50/106 (47.17%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 126 HIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPE-NKRRISTLKGIVIARRNAGLNS 185
           +I++ L+KE +E++ A R +P   PG  +++ V+V E N+ R+   +G+ IAR+N GLNS
Sbjct: 3   NIIEQLEKEQIEKLTADRGVPSFAPGDTLKVNVKVIEGNRERVQAYEGVCIARKNDGLNS 62

Query: 186 TFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDK 231
           +F +R++  G G+E +FPLYSPNI  I+V+ +  VRRAKLYYLRD+
Sbjct: 63  SFVVRKISYGEGVERIFPLYSPNIASIEVVRRGDVRRAKLYYLRDR 108

[Close]

BLAST of CsGy1G013840 vs. ExPASy Swiss-Prot
Match: Q2G8H1 (50S ribosomal protein L19 OS=Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199) OX=279238 GN=rplS PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.7e-20
Identity = 51/106 (48.11%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 126 HIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKR-RISTLKGIVIARRNAGLNS 185
           +++Q L+ EA+ E KA++EIPD + G  V++ V V E +R R+   +G+ IAR N GL S
Sbjct: 2   NLIQQLEAEAIAEFKAKKEIPDFRAGDTVRVGVRVVEGERTRVQAYEGVCIARSNRGLGS 61

Query: 186 TFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDK 231
            F +R++  G G+E +FPLYSPNI  I V+ +  VRRAKLYYLR +
Sbjct: 62  NFTVRKISFGEGVERVFPLYSPNIDSITVVRRGVVRRAKLYYLRGR 107

[Close]

BLAST of CsGy1G013840 vs. NCBI nr
Match: XP_011654048.1 (50S ribosomal protein L19-1, chloroplastic isoform X4 [Cucumis sativus])

HSP 1 Score: 459 bits (1180), Expect = 1.54e-162
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60
           MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC
Sbjct: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60

Query: 61  GSFLRSFSRSGNQYPEAFLAETAAPFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRL 120
           GSFLRSFSRSGNQYPEAFLAETAAPFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRL
Sbjct: 61  GSFLRSFSRSGNQYPEAFLAETAAPFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRL 120

Query: 121 DKTSRHIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNA 180
           DKTSRHIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNA
Sbjct: 121 DKTSRHIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNA 180

Query: 181 GLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 237
           GLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 181 GLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 237

[Close]

BLAST of CsGy1G013840 vs. NCBI nr
Match: XP_031743858.1 (50S ribosomal protein L19, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 453 bits (1165), Expect = 3.44e-160
Identity = 237/241 (98.34%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60
           MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC
Sbjct: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60

Query: 61  GSFLRSFSRSGNQYPEAF----LAETAAPFSSRGIATTSSMESALQGSPAVDSVIPPRIK 120
           GSFLRSFSRSGNQYPEAF    LAETAAPFSSRGIATTSSMESALQGSPAVDSVIPPRIK
Sbjct: 61  GSFLRSFSRSGNQYPEAFVCIFLAETAAPFSSRGIATTSSMESALQGSPAVDSVIPPRIK 120

Query: 121 FKRLDKTSRHIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIA 180
           FKRLDKTSRHIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIA
Sbjct: 121 FKRLDKTSRHIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIA 180

Query: 181 RRNAGLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 237
           RRNAGLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKK
Sbjct: 181 RRNAGLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 240

[Close]

BLAST of CsGy1G013840 vs. NCBI nr
Match: XP_031743853.1 (50S ribosomal protein L19-2, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 442 bits (1137), Expect = 1.75e-155
Identity = 237/269 (88.10%), Postives = 237/269 (88.10%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60
           MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC
Sbjct: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60

Query: 61  GSFLRSFSRSGNQYPEAF--------------------------------LAETAAPFSS 120
           GSFLRSFSRSGNQYPEAF                                LAETAAPFSS
Sbjct: 61  GSFLRSFSRSGNQYPEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETAAPFSS 120

Query: 121 RGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDI 180
           RGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDI
Sbjct: 121 RGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDI 180

Query: 181 KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI 237
           KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI
Sbjct: 181 KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI 240

[Close]

BLAST of CsGy1G013840 vs. NCBI nr
Match: XP_031743848.1 (50S ribosomal protein L19-2, chloroplastic isoform X1 [Cucumis sativus] >XP_031743849.1 50S ribosomal protein L19-2, chloroplastic isoform X1 [Cucumis sativus] >XP_031743851.1 50S ribosomal protein L19-2, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 441 bits (1133), Expect = 8.25e-155
Identity = 237/273 (86.81%), Postives = 237/273 (86.81%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60
           MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC
Sbjct: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60

Query: 61  GSFLRSFSRSGNQYPEAF------------------------------------LAETAA 120
           GSFLRSFSRSGNQYPEAF                                    LAETAA
Sbjct: 61  GSFLRSFSRSGNQYPEAFVCIFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETAA 120

Query: 121 PFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARRE 180
           PFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARRE
Sbjct: 121 PFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARRE 180

Query: 181 IPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLY 237
           IPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLY
Sbjct: 181 IPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLY 240

[Close]

BLAST of CsGy1G013840 vs. NCBI nr
Match: KAE8652777.1 (hypothetical protein Csa_022701 [Cucumis sativus])

HSP 1 Score: 442 bits (1137), Expect = 5.29e-152
Identity = 237/269 (88.10%), Postives = 237/269 (88.10%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60
           MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC
Sbjct: 232 MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 291

Query: 61  GSFLRSFSRSGNQYPEAF--------------------------------LAETAAPFSS 120
           GSFLRSFSRSGNQYPEAF                                LAETAAPFSS
Sbjct: 292 GSFLRSFSRSGNQYPEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETAAPFSS 351

Query: 121 RGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDI 180
           RGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDI
Sbjct: 352 RGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDI 411

Query: 181 KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI 237
           KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI
Sbjct: 412 KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI 471

[Close]

BLAST of CsGy1G013840 vs. ExPASy TrEMBL
Match: A0A0A0LV41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126060 PE=3 SV=1)

HSP 1 Score: 442 bits (1137), Expect = 1.07e-153
Identity = 237/269 (88.10%), Postives = 237/269 (88.10%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60
           MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC
Sbjct: 138 MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 197

Query: 61  GSFLRSFSRSGNQYPEAF--------------------------------LAETAAPFSS 120
           GSFLRSFSRSGNQYPEAF                                LAETAAPFSS
Sbjct: 198 GSFLRSFSRSGNQYPEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETAAPFSS 257

Query: 121 RGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDI 180
           RGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDI
Sbjct: 258 RGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDI 317

Query: 181 KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI 237
           KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI
Sbjct: 318 KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI 377

[Close]

BLAST of CsGy1G013840 vs. ExPASy TrEMBL
Match: A0A1S3CHY3 (50S ribosomal protein L19, chloroplastic-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500938 PE=3 SV=1)

HSP 1 Score: 425 bits (1093), Expect = 1.36e-149
Identity = 224/237 (94.51%), Postives = 225/237 (94.94%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60
           MQGFRRINQLVRRQ PDA+FKLIRGYPLNGDA CSCSAPM MENSFTIP LFGKSYGSL 
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSFLRSFSRSGNQYPEAFLAETAAPFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRL 120
           GS  RSFS SGNQYPEAFLAE AAPFSSRGIATTSSM SAL GSPAVDSVIPPRIKFKRL
Sbjct: 61  GSLWRSFSWSGNQYPEAFLAEIAAPFSSRGIATTSSMGSALLGSPAVDSVIPPRIKFKRL 120

Query: 121 DKTSRHIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNA 180
           DKTSRHIMQILDKEAVEEVKA REIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNA
Sbjct: 121 DKTSRHIMQILDKEAVEEVKAHREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNA 180

Query: 181 GLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 237
           GLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 181 GLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 237

[Close]

BLAST of CsGy1G013840 vs. ExPASy TrEMBL
Match: A0A1S3CHF9 (50S ribosomal protein L19-2, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500938 PE=3 SV=1)

HSP 1 Score: 409 bits (1050), Expect = 1.53e-142
Identity = 224/269 (83.27%), Postives = 225/269 (83.64%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60
           MQGFRRINQLVRRQ PDA+FKLIRGYPLNGDA CSCSAPM MENSFTIP LFGKSYGSL 
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSFLRSFSRSGNQYPEAF--------------------------------LAETAAPFSS 120
           GS  RSFS SGNQYPEAF                                LAE AAPFSS
Sbjct: 61  GSLWRSFSWSGNQYPEAFKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFSS 120

Query: 121 RGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDI 180
           RGIATTSSM SAL GSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKA REIPDI
Sbjct: 121 RGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDI 180

Query: 181 KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI 237
           KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI
Sbjct: 181 KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI 240

[Close]

BLAST of CsGy1G013840 vs. ExPASy TrEMBL
Match: A0A1S3CHC3 (50S ribosomal protein L19-2, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500938 PE=3 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 2.24e-142
Identity = 224/270 (82.96%), Postives = 225/270 (83.33%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60
           MQGFRRINQLVRRQ PDA+FKLIRGYPLNGDA CSCSAPM MENSFTIP LFGKSYGSL 
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSFLRSFSRSGNQYPEAF---------------------------------LAETAAPFS 120
           GS  RSFS SGNQYPEAF                                 LAE AAPFS
Sbjct: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120

Query: 121 SRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPD 180
           SRGIATTSSM SAL GSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKA REIPD
Sbjct: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180

Query: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 237
           IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN
Sbjct: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240

[Close]

BLAST of CsGy1G013840 vs. ExPASy TrEMBL
Match: A0A6J1CB38 (50S ribosomal protein L19, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111009074 PE=3 SV=1)

HSP 1 Score: 369 bits (947), Expect = 7.10e-127
Identity = 202/269 (75.09%), Postives = 214/269 (79.55%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60
           MQ FRRINQLVRRQ PDA+FK IRGYPLNGDAGCSCSAPMSMEN FTI   FG  YGSL 
Sbjct: 1   MQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLN 60

Query: 61  GSFLRSFSRSGNQYPEAF--------------------------------LAETAAPFSS 120
           GSFLRSFS+  NQYPEAF                                LAE A PFSS
Sbjct: 61  GSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFSS 120

Query: 121 RGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPDI 180
           RGIAT SS+ES  Q SP +   I PRIKFKRLDKTS+HIMQILDKEA+EEVKA+REIPDI
Sbjct: 121 RGIAT-SSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQILDKEAIEEVKAQREIPDI 180

Query: 181 KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI 237
           KPGYIVQLKVEVPENKRR+STLKGIVIARRNAGLN+TFR+RR+VAGVGIESLFPLYSPNI
Sbjct: 181 KPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNI 240

[Close]

BLAST of CsGy1G013840 vs. TAIR 10
Match: AT4G11630.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 229.9 bits (585), Expect = 2.1e-60
Identity = 116/151 (76.82%), Postives = 140/151 (92.72%), Query Frame = 0


Query: 86  FSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREI 145
           ++SR  +TT   +S++QGSP  D V+P RIKFKRLDKT++HIMQI+DKEAVEEV++ REI
Sbjct: 76  YASRCFSTTG--DSSVQGSPESDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRSLREI 135

Query: 146 PDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYS 205
           P+IKPGYIVQLKVEVPENKRR+S +KG+VIARRNAGLNSTFRIRR+VAGVG+ES+FPLYS
Sbjct: 136 PEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYS 195

Query: 206 PNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 237
           PN++EIKV++KKKVRRAKLYYLRDK+NALKK
Sbjct: 196 PNLREIKVVDKKKVRRAKLYYLRDKVNALKK 224

[Close]

BLAST of CsGy1G013840 vs. TAIR 10
Match: AT5G11750.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 228.0 bits (580), Expect = 7.9e-60
Identity = 117/152 (76.97%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 86  FSSRGIATT-SSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARRE 145
           +S R  +TT  S++S  QGSP  D V+P RIKFKRLDKT++HIMQI+DKEAVEEV+  RE
Sbjct: 77  YSLRCFSTTGDSVQSTPQGSPESDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRNLRE 136

Query: 146 IPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLY 205
           IP+IKPGYIVQLKVEVPENKRR+S +KG+VIARRNAGLNSTFRIRR+VAGVG+ES+FPLY
Sbjct: 137 IPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLY 196

Query: 206 SPNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 237
           SPN++EIKV++KKKVRRAKLYYLRDK+NALKK
Sbjct: 197 SPNLREIKVVDKKKVRRAKLYYLRDKVNALKK 228

[Close]

BLAST of CsGy1G013840 vs. TAIR 10
Match: AT1G24240.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 224.9 bits (572), Expect = 6.7e-59
Identity = 115/151 (76.16%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 86  FSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREI 145
           FSSR  +TT     ++QGSP  D V+P RIKFKRLDKT++HIMQI+DKEAVEEV+  REI
Sbjct: 74  FSSRCFSTTG---DSVQGSPESDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRTLREI 133

Query: 146 PDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYS 205
           P+IKPGYIVQLKVEVPENKRR+S +KG+VIARRNAGLNSTFRIRR+VAGVG+ES+FPLYS
Sbjct: 134 PEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYS 193

Query: 206 PNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 237
           PN++ IKV++KKKVRRAKLYYLR+K+NALKK
Sbjct: 194 PNLRVIKVVDKKKVRRAKLYYLREKVNALKK 221

[Close]

BLAST of CsGy1G013840 vs. TAIR 10
Match: AT4G17560.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 135.6 bits (340), Expect = 5.3e-32
Identity = 75/159 (47.17%), Postives = 109/159 (68.55%), Query Frame = 0


Query: 76  EAFLAETAAPFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEA 135
           E F+AE A         T  ++E  ++  P       PRIK          +M IL+++A
Sbjct: 82  EEFVAEIA--------DTEGNVEEVVEAKP----TRKPRIKL-------GDVMGILNQKA 141

Query: 136 VEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGV 195
           +E  +  R +P+I+ G IV++K+EVPENKRR+S  KGIV++R+NAG+++T RIRR++AG+
Sbjct: 142 IEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGI 201

Query: 196 GIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNAL 235
           G+E +FP+YSPNIKEIKV+  +KVRRA+LYYLRDK+  L
Sbjct: 202 GVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 221

[Close]

BLAST of CsGy1G013840 vs. TAIR 10
Match: AT5G47190.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 135.6 bits (340), Expect = 5.3e-32
Identity = 63/108 (58.33%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 127 IMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTF 186
           IM +L+K+A+E  +  R +P ++ G IV++K+EVPENKRR+S  KGIV++R+NAG+++T 
Sbjct: 118 IMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTI 177

Query: 187 RIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNAL 235
           RIRR++AG+G+E +FP+YSPNIKEIKV+  +KVRRA+LYYLRDK+  L
Sbjct: 178 RIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 225

The following BLAST results are available for this feature:

BLAST of CsGy1G013840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82413	2.6e-31	42.03	50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 P...	[more]
Q8W463	7.5e-31	47.17	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q8RXX5	7.5e-31	58.33	50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q2VZV5	1.2e-20	47.17	50S ribosomal protein L19 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 70...	[more]
Q2G8H1	7.7e-20	48.11	50S ribosomal protein L19 OS=Novosphingobium aromaticivorans (strain ATCC 700278...	[more]

BLAST of CsGy1G013840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654048.1	1.54e-162	100.00	50S ribosomal protein L19-1, chloroplastic isoform X4 [Cucumis sativus]	[more]
XP_031743858.1	3.44e-160	98.34	50S ribosomal protein L19, chloroplastic isoform X3 [Cucumis sativus]	[more]
XP_031743853.1	1.75e-155	88.10	50S ribosomal protein L19-2, chloroplastic isoform X2 [Cucumis sativus]	[more]
XP_031743848.1	8.25e-155	86.81	50S ribosomal protein L19-2, chloroplastic isoform X1 [Cucumis sativus] >XP_0317...	[more]
KAE8652777.1	5.29e-152	88.10	hypothetical protein Csa_022701 [Cucumis sativus]	[more]

BLAST of CsGy1G013840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV41	1.07e-153	88.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126060 PE=3 SV=1	[more]
A0A1S3CHY3	1.36e-149	94.51	50S ribosomal protein L19, chloroplastic-like isoform X3 OS=Cucumis melo OX=3656...	[more]
A0A1S3CHF9	1.53e-142	83.27	50S ribosomal protein L19-2, chloroplastic-like isoform X2 OS=Cucumis melo OX=36...	[more]
A0A1S3CHC3	2.24e-142	82.96	50S ribosomal protein L19-2, chloroplastic-like isoform X1 OS=Cucumis melo OX=36...	[more]
A0A6J1CB38	7.10e-127	75.09	50S ribosomal protein L19, chloroplastic-like OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of CsGy1G013840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11630.1	2.1e-60	76.82	Ribosomal protein L19 family protein	[more]
AT5G11750.1	7.9e-60	76.97	Ribosomal protein L19 family protein	[more]
AT1G24240.1	6.7e-59	76.16	Ribosomal protein L19 family protein	[more]
AT4G17560.1	5.3e-32	47.17	Ribosomal protein L19 family protein	[more]
AT5G47190.1	5.3e-32	58.33	Ribosomal protein L19 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PRINTS	PR00061	RIBOSOMALL19	coord: 191..214 score: 40.62 coord: 132..161 score: 21.53
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 135..231 e-value: 3.4E-32 score: 110.7
IPR001857	Ribosomal protein L19	TIGRFAM	TIGR01024	TIGR01024	coord: 136..231 e-value: 6.5E-30 score: 101.6
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 71..235
IPR038657	Ribosomal protein L19 superfamily	GENE3D	2.30.30.790		coord: 117..237 e-value: 1.0E-35 score: 124.3
None	No IPR available	PANTHER	PTHR15680:SF9	39S RIBOSOMAL PROTEIN L19, MITOCHONDRIAL	coord: 71..235
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 134..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G013840.2	CsGy1G013840.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome