CsGy1G013825 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G013825
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 9439897 .. 9440431 (+)
RNA-Seq ExpressionCsGy1G013825
SyntenyCsGy1G013825
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGAAGTTTGAGGCATTGATTTGCTTCCACAATATTTGTTTTTTTACATCAATTTTATTTATCTTAACAGTGTATCACAGAGCTACCTTGAATTTTCCAAACTCATTAGTTCGAGTTGAAGCAGCTTTATTAAAGGAATTGTTAGTTTGGGCTGCGAGCAATTTTGAGCGATTTTTTCTGGTAGTAAAATAAAACTTTTGGTTTGTTGGCAATTAGTACAAGGTGGTCTTGGTATTGGACCAATCAGTACAAACATATGAATTTGGTTCTAATCGGTCAAACAAATTTAACAGGCACACTAAGAGCAATTAGCATTCGAGTCTGGGTTAACATATCTACAATTTCAAAGATGTTTGTGTTGGTAGTTGCAGTTCATGTCTGTAACGGCAGACACATTATGTTCTGGAAGAAACCTTCATCAAATCAGATAAACAATTTCATGAAACTTGGATTTCTGATGACCTTCGCAGAAGTTAAACTTTCAAGTGTCCCTATTAGGCTTAATCTGGATATCTATGAAAGCTTTGACGGCTGA

mRNA sequence

ACGAAGTTTGAGGCATTGATTTGCTTCCACAATATTTGTTTTTTTACATCAATTTTATTTATCTTAACAGTGTATCACAGAGCTACCTTGAATTTTCCAAACTCATTAGTTCGAGTTGAAGCAGCTTTATTAAAGGAATTGTTAGTTTGGGCTGCGAGCAATTTTGAGCGATTTTTTCTGGTAGTAAAATAAAACTTTTGGTTTGTTGGCAATTAGTACAAGGTGGTCTTGGTATTGGACCAATCAGTACAAACATATGAATTTGGTTCTAATCGGTCAAACAAATTTAACAGGCACACTAAGAGCAATTAGCATTCGAGTCTGGGTTAACATATCTACAATTTCAAAGATGTTTGTGTTGGTAGTTGCAGTTCATGTCTGTAACGGCAGACACATTATGTTCTGGAAGAAACCTTCATCAAATCAGATAAACAATTTCATGAAACTTGGATTTCTGATGACCTTCGCAGAAGTTAAACTTTCAAGTGTCCCTATTAGGCTTAATCTGGATATCTATGAAAGCTTTGACGGCTGA

Coding sequence (CDS)

ATGAATTTGGTTCTAATCGGTCAAACAAATTTAACAGGCACACTAAGAGCAATTAGCATTCGAGTCTGGGTTAACATATCTACAATTTCAAAGATGTTTGTGTTGGTAGTTGCAGTTCATGTCTGTAACGGCAGACACATTATGTTCTGGAAGAAACCTTCATCAAATCAGATAAACAATTTCATGAAACTTGGATTTCTGATGACCTTCGCAGAAGTTAAACTTTCAAGTGTCCCTATTAGGCTTAATCTGGATATCTATGAAAGCTTTGACGGCTGA

Protein sequence

MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVLVVAVHVCNGRHIMFWKKPSSNQINNFMKLGFLMTFAEVKLSSVPIRLNLDIYESFDG*
Homology
[Close]
BLAST of CsGy1G013825 vs. NCBI nr
Match: KGN64841.1 (hypothetical protein Csa_022832 [Cucumis sativus])

HSP 1 Score: 183 bits (464), Expect = 4.33e-58
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVLVVAVHVCNGRHIMFWKKPSSNQINN 60
          MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVLVVAVHVCNGRHIMFWKKPSSNQINN
Sbjct: 1  MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVLVVAVHVCNGRHIMFWKKPSSNQINN 60

Query: 61 FMKLGFLMTFAEVKLSSVPIRLNLDIYESFDG 92
          FMKLGFLMTFAEVKLSSVPIRLNLDIYESFDG
Sbjct: 61 FMKLGFLMTFAEVKLSSVPIRLNLDIYESFDG 92

[Close]
BLAST of CsGy1G013825 vs. ExPASy TrEMBL
Match: A0A0A0LXX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126030 PE=4 SV=1)

HSP 1 Score: 183 bits (464), Expect = 2.10e-58
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVLVVAVHVCNGRHIMFWKKPSSNQINN 60
          MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVLVVAVHVCNGRHIMFWKKPSSNQINN
Sbjct: 1  MNLVLIGQTNLTGTLRAISIRVWVNISTISKMFVLVVAVHVCNGRHIMFWKKPSSNQINN 60

Query: 61 FMKLGFLMTFAEVKLSSVPIRLNLDIYESFDG 92
          FMKLGFLMTFAEVKLSSVPIRLNLDIYESFDG
Sbjct: 61 FMKLGFLMTFAEVKLSSVPIRLNLDIYESFDG 92

The following BLAST results are available for this feature:
BLAST of CsGy1G013825 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G013825 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64841.14.33e-58100.00hypothetical protein Csa_022832 [Cucumis sativus][more]
BLAST of CsGy1G013825 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXX92.10e-58100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126030 PE=4 SV=1[more]
BLAST of CsGy1G013825 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G013825.1CsGy1G013825.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane