CsGy1G013600 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G013600
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr1: 9087598 .. 9087777 (-)
RNA-Seq Expression	CsGy1G013600
Synteny	CsGy1G013600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACGAACAGCAACAGCTTGGAAAAAATGGGCAACATGGGACGAAGCTCACTTGACTGGATGGAGGTCTTTGACTTCATCTGAGCAAGCGGTGAACAATGAAGAAATCGGTGAATGTTGGACGATCAACGACGAGGGACGGTGGCAGCAACTTAGGGTAATGCGAGAGGAAGAATAA

mRNA sequence

ATGGGACGAACAGCAACAGCTTGGAAAAAATGGGCAACATGGGACGAAGCTCACTTGACTGGATGGAGGTCTTTGACTTCATCTGAGCAAGCGGTGAACAATGAAGAAATCGGTGAATGTTGGACGATCAACGACGAGGGACGGTGGCAGCAACTTAGGGTAATGCGAGAGGAAGAATAA

Coding sequence (CDS)

ATGGGACGAACAGCAACAGCTTGGAAAAAATGGGCAACATGGGACGAAGCTCACTTGACTGGATGGAGGTCTTTGACTTCATCTGAGCAAGCGGTGAACAATGAAGAAATCGGTGAATGTTGGACGATCAACGACGAGGGACGGTGGCAGCAACTTAGGGTAATGCGAGAGGAAGAATAA

Protein sequence

MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE*

Homology

[Close]

BLAST of CsGy1G013600 vs. NCBI nr
Match: KGN64821.1 (hypothetical protein Csa_022836 [Cucumis sativus])

HSP 1 Score: 132 bits (333), Expect = 4.13e-39
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE 59
          MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE
Sbjct: 1  MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE 59

[Close]

BLAST of CsGy1G013600 vs. ExPASy TrEMBL
Match: A0A0A0LXV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G119390 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 2.00e-39
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE 59
          MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE
Sbjct: 1  MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE 59

The following BLAST results are available for this feature:

BLAST of CsGy1G013600 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G013600 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64821.1	4.13e-39	100.00	hypothetical protein Csa_022836 [Cucumis sativus]	[more]

BLAST of CsGy1G013600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXV9	2.00e-39	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G119390 PE=4 SV=1	[more]

BLAST of CsGy1G013600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G013600.2	CsGy1G013600.2	mRNA