CsGy1G013415 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G013415
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 8798777 .. 8799067 (+)
RNA-Seq ExpressionCsGy1G013415
SyntenyCsGy1G013415
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCCACTATGAAGATGGAGGTATATAATAATTTTCATTCCTCCATTTTTGTTTCGGTGGAGGTCTCGGAGATCCGGTGCTCTCGCGCTCGCATACCGGAACCGGACGTCAATCCCTTCTCACCATTTTTCGAGGGCCAGGGTTCTTCTTTCCCATCTCTCGTTCGGGTCCTCCTCCCGGTGCTTGTAGCCTTCTTCCCAATCCCAATCACTCCTTTTCATTTCTATGTATTTTGTTCTTTAACCGGATTTTTGGGATTTCCTTCTCCTCCTCCTACCTCCTGCTAA

mRNA sequence

ATGGAGGCCACTATGAAGATGGAGGTATATAATAATTTTCATTCCTCCATTTTTGTTTCGGTGGAGGTCTCGGAGATCCGGTGCTCTCGCGCTCGCATACCGGAACCGGACGTCAATCCCTTCTCACCATTTTTCGAGGGCCAGGGTTCTTCTTTCCCATCTCTCGTTCGGGTCCTCCTCCCGGTGCTTGTAGCCTTCTTCCCAATCCCAATCACTCCTTTTCATTTCTATGTATTTTGTTCTTTAACCGGATTTTTGGGATTTCCTTCTCCTCCTCCTACCTCCTGCTAA

Coding sequence (CDS)

ATGGAGGCCACTATGAAGATGGAGGTATATAATAATTTTCATTCCTCCATTTTTGTTTCGGTGGAGGTCTCGGAGATCCGGTGCTCTCGCGCTCGCATACCGGAACCGGACGTCAATCCCTTCTCACCATTTTTCGAGGGCCAGGGTTCTTCTTTCCCATCTCTCGTTCGGGTCCTCCTCCCGGTGCTTGTAGCCTTCTTCCCAATCCCAATCACTCCTTTTCATTTCTATGTATTTTGTTCTTTAACCGGATTTTTGGGATTTCCTTCTCCTCCTCCTACCTCCTGCTAA

Protein sequence

MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLLPVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC*
Homology
[Close]
BLAST of CsGy1G013415 vs. NCBI nr
Match: KGN64804.1 (hypothetical protein Csa_013690 [Cucumis sativus])

HSP 1 Score: 200 bits (508), Expect = 1.12e-64
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 1  MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL 60
          MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL
Sbjct: 1  MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL 60

Query: 61 PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC 96
          PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC
Sbjct: 61 PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC 96

[Close]
BLAST of CsGy1G013415 vs. ExPASy TrEMBL
Match: A0A0A0LUY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G108290 PE=4 SV=1)

HSP 1 Score: 200 bits (508), Expect = 5.41e-65
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 1  MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL 60
          MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL
Sbjct: 1  MEATMKMEVYNNFHSSIFVSVEVSEIRCSRARIPEPDVNPFSPFFEGQGSSFPSLVRVLL 60

Query: 61 PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC 96
          PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC
Sbjct: 61 PVLVAFFPIPITPFHFYVFCSLTGFLGFPSPPPTSC 96

The following BLAST results are available for this feature:
BLAST of CsGy1G013415 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G013415 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64804.11.12e-64100.00hypothetical protein Csa_013690 [Cucumis sativus][more]
BLAST of CsGy1G013415 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUY95.41e-65100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G108290 PE=4 SV=1[more]
BLAST of CsGy1G013415 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G013415.1CsGy1G013415.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane