CsGy1G013125 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G013125
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 8519642 .. 8520896 (-)
RNA-Seq ExpressionCsGy1G013125
SyntenyCsGy1G013125
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGAAGAGGAAATTTCTCTCTATATAATATTAATGGTTACTTCTTAATTGAAACGACGATATTTTGTTTAATCTCATTTTAAATTACTCTTAGTGGTGAAAAAGAACATAGCTCATTTTTCATATATCAAAGTGTATTAGCCCCGTGAAGTTTGTAGTTTGAATTTTCCTACTCAATTATACTTTAAAAAAAGTTACTTTATTAATATATTATTTTGTTGAGTAATATTTAAATATAAAAAGACAACAATATAATCGTTACACGTGCAAATGCATGTTAATATTTTATAGTATTGAAAAATGAAAATATACATTAAATGATTTAGTTATTAATTTCAAATATATCAAATATAATTATAATGAATTTTAATAAGTTAGGGAGTAGTAAGAATTAGAAAAAAAAAAAATAGAAAACTTCAAATTTTGGTGAACTTGAGACGCGAGACCGACCCGTTAGAAATCACACTCCCTTTCTTCATCTCTCGTTGCTGCAGTACCGCCGCTGCTGGGTGTTTCTGTTTCTCCTTCTCTTTCTTACAGCTCTCTCTTTCTCACTGTTCGCTGGTGGGTTTAATTTATTTGGTGTCATCTAACTGTCACCTCATTTACAATCAGCACATTATCCTACAAATTTTCTCATTTTTTATGTTCAACCTACAGTTTTAGAGAAATTATTTGATGGAATTCTTTCCTTGGGTACAAAGAACGGTCTTCTTATTTTGGGTCCATAGTATATTGCATTCTTAGCATAATCATATACCAAAGCATACCCAATAGATTTTCCACCACCAAGGGAAGTTCGAAACTTGAAAACAAAGATTGCATGTGGTGAAGGTTGTAATATCTTTAGAACTACTCTGTTTGTAGCTTTAGGTTGTTATTGGATTCATTTGAACACCATTCTGAAAGTTCCAAGTCTATTTTGCAACTCTTGGGAACTCTCTTGGTTGTAGTTTGGGACCAATTCACAGTATTTGAATTGAGGTTTAGGGGCAACTCTGAATGAAGTTTTGAGCTAAGGTTTTAGGGAAACCTTGTTTTCATCGTTTCATTAGTCTTTTGAATAGCTTAGAAGCACTCCAAAACGTCAATTGATTAGTTCTTTCTTGTAGAGTCTAATTACTTGTGTGCTAGCATGCTACGTGCTTCATTTATGTTGTGTTATATGACTTACACGAACTCATTTATAGGATCACTACGTGCGGTGATATTTGTGTTTTGTTATACGACTTCTCTTCGACTATTGTCATAG

mRNA sequence

ATGGTTGAAGAGGAAATTTCTCTCTATATAATATTAATGAAAACTTCAAATTTTGGTGAACTTGAGACGCGAGACCGACCCGTTAGAAATCACACTCCCTTTCTTCATCTCTCGTTGCTGCAGTACCGCCGCTGCTGGGTGTTTCTGTTTCTCCTTCTCTTTCTTACAGCTCTCTCTTTCTCACTGTTCGCTGGATCACTACGTGCGGTGATATTTGTGTTTTGTTATACGACTTCTCTTCGACTATTGTCATAG

Coding sequence (CDS)

ATGGTTGAAGAGGAAATTTCTCTCTATATAATATTAATGAAAACTTCAAATTTTGGTGAACTTGAGACGCGAGACCGACCCGTTAGAAATCACACTCCCTTTCTTCATCTCTCGTTGCTGCAGTACCGCCGCTGCTGGGTGTTTCTGTTTCTCCTTCTCTTTCTTACAGCTCTCTCTTTCTCACTGTTCGCTGGATCACTACGTGCGGTGATATTTGTGTTTTGTTATACGACTTCTCTTCGACTATTGTCATAG

Protein sequence

MVEEEISLYIILMKTSNFGELETRDRPVRNHTPFLHLSLLQYRRCWVFLFLLLFLTALSFSLFAGSLRAVIFVFCYTTSLRLLS*
Homology
[Close]
BLAST of CsGy1G013125 vs. NCBI nr
Match: KGN64771.1 (hypothetical protein Csa_013162 [Cucumis sativus])

HSP 1 Score: 159 bits (403), Expect = 4.95e-49
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0 

Query: 1  MVEEEISLYIILMKTSNFGELETRDRPVRNHTPFLHLSLLQYRRCWVFLFLLLFLTALSF 60
          MVEEEISLYIILMKTSNFGELETRDRPVRNHTPFLHLSLLQYRRCWVFLFL LFLTALSF
Sbjct: 1  MVEEEISLYIILMKTSNFGELETRDRPVRNHTPFLHLSLLQYRRCWVFLFLPLFLTALSF 60

Query: 61 SLFAGSLRAVIFVFCYTTSLRLLS 84
          SLFAGSLRAVIFVFCYTTSLRLLS
Sbjct: 61 SLFAGSLRAVIFVFCYTTSLRLLS 84

[Close]
BLAST of CsGy1G013125 vs. ExPASy TrEMBL
Match: A0A0A0LXP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096060 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 2.40e-49
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0 

Query: 1  MVEEEISLYIILMKTSNFGELETRDRPVRNHTPFLHLSLLQYRRCWVFLFLLLFLTALSF 60
          MVEEEISLYIILMKTSNFGELETRDRPVRNHTPFLHLSLLQYRRCWVFLFL LFLTALSF
Sbjct: 1  MVEEEISLYIILMKTSNFGELETRDRPVRNHTPFLHLSLLQYRRCWVFLFLPLFLTALSF 60

Query: 61 SLFAGSLRAVIFVFCYTTSLRLLS 84
          SLFAGSLRAVIFVFCYTTSLRLLS
Sbjct: 61 SLFAGSLRAVIFVFCYTTSLRLLS 84

The following BLAST results are available for this feature:
BLAST of CsGy1G013125 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G013125 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64771.14.95e-4998.81hypothetical protein Csa_013162 [Cucumis sativus][more]
BLAST of CsGy1G013125 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXP52.40e-4998.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096060 PE=4 SV=1[more]
BLAST of CsGy1G013125 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G013125.1CsGy1G013125.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane