CsGy1G012280 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G012280
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionSquamosa promoter-binding-like protein
LocationGy14Chr1: 7739927 .. 7743630 (+)
RNA-Seq ExpressionCsGy1G012280
SyntenyCsGy1G012280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTCTACTTAAAAGTAAGAAGAAAAAAAACCCAAAAAAATTTGGAAATTGTGGTCCTCAATCCTCACCTTTAGTACTATACTACTACTACAAATGTCCTCTGCAAGAAACCAATTTTTTGTTTCTTCTTTCTTTCTCTTTACTTCTTCTTCTTAATTATTACTCTCTCACTATAATCTCTCTGCATCTTTGGTTCAGCTTTTTTGTAATGGCGACTGGAAAAGCTGATGGAAAAAGGAGGCTAAGTTATTACGAAATGGAGGAAGAAGATGAAGAAGATGAAGAAGAAGATGAAGATGAGGAACAAGAAATCGATGCAGAATTAGGGTTTTCAGGGGATTTTAATAAGAAAAAGAAAATTTTTACATCTGGGGGTTCTTCTAATAAAAAATCCGCATCTGCCTTCGGTGGAGCTCCTGCGGCGGCGCCACCGCCCCCGTGTCAGGCCGATAATTGCAATGCCGATCTGTCTTCTTCTAAGCGGTACCACCGCCGTCATAAGGTCTGTGAGTTTCATGCTAAAGCTCCCGTGGTTCCGGTGACCGGAATCGACCAGCGGTTCTGTCAACAATGTAGCAGGTATTTTGGCCTCAAAAAAACCCTAATTTTAGATCTGTTTTCTAAATTTCGAAGCTAACGTAAAAAAATGTTTAGTTTAATCTTAGCTTATGGTTTTGTATGTTTAATTAATTAAGATTATCTCTGGAATTTAGATGGTCTTAATTAATTAGTGCAATTTTTTCTTCATTTCTTTTGATGGGATAATGGAATTTTTGGTTGGTTCATTAAAAAATAAATTTACTGTTTATTCATCATAAGATTTCATTGGTGCTTAGAAAAAGTATATTTCAACTATGAAATAAATAAATTAGAATTTATAGTAATGTAAAAAATGGTTTTAAATGACTTTTTTTTTCTTAATGATTTTCCCAATTTTTAAGCTTTGTTAATATTTTTACTAAAATATCATCAATTTTTATTATTCATTGACGGCTTTTTATTCGATTTGTTCCATTTATATCAAAACTTTTCGATATATATATTGGTTTATAAAAAGTTCTATATATCTAATGAAAATATTTTTCTTTTCAAAATAGTTTATTACTGTGTTTATATTTTAATTAAACCTTCCAATATATATTGATATACTTTTGTACTAGATTTTATGAGGTTTTTAAGGGATTTATTTGTCCTTTAAAAATAGAAGGACAATAGAAATGGATAGCAGAACAACATCAATATTGACTATTGAGTTGTAAAAACTATTCAACACACATAATTTAACCAATATTAATTTTGCAAAATAATAAATAATAATAAAATCATCATTTGGTTGCACTGAAACCTAAAAAGATGTGATGAATTCAAAACCAAGAAGATAATAATGAAAGTAAAGTTAAAAGATTTAAACCTAACTCAATTCACAACTAGAAGAAAACAATTTGATTAATTTTTGTTCGTTCTAAAAATTTAAAATAAAGATGTGCGTTTGATTTCTGAATTTTCTGTACGCAGTCAACAAAATTTTATATAATATATTTGTTTAGTTTTTAAGTTTTCGAACTGTAACTCTTTTGTGATTGAGTATTCACTGTAGGTTTAAAAGGTCTTTTCGAAGTTTTTATTTTCTTATTATAAATAATTATACGTCAGTTTGATTTAGAAAAATAATTTCACGGACAAAAGATAATTTTATAAAAAAATTAGAAATGATTGTTAGACCTTTTAAATATGTTTTGAAAAATTTAAGTGAAAAAGATGAAATATACCTATTCTCCAAGACTCTGACTCTAAAAAATTGTCATTCTAAAACTCGAAATCAAAGGTAAATATTACTGAAAACAAGTTGGCATTAGGCTAAAAGATGATGAAGACGAGTTGGACAAAATTATTGGTTATTTATGAATTAGCTATAAATGCTCTCTTTTATATTATAATAAATTTAGTTGGTACCTTTGTGTCAAAAAAAAAAAAATGTTAGTCCTGGTTTCATGTAAGATCAAATCTTTGTCAATATTCATCGTTATTACATTAAATTTGTTTTTATACTTTTTGTCCATTGTTTAGGTAATTGAGGAAATCTAAAAAGAAAGAGGTTAGGGGTCAACAAGTTGGCAATTTGCCATATACACTAAATCAGCCAAACGCATTTAGTGAAGAATTCAAGGAAGCCTAACAATACTGATTGATGTCCTTGACCTAAATATTGAAACCCCCATTATTGATTCTTAAGCCTAAGATAATATATTAGGGTTAAATTATGTTCTCATCTAAAAATATTGGACAATTAGTTTTTTTTGGGTTTTAAACCCATTTTAACTTGTAGGCATTTTATTAAGAAAAAAAGAAGGGGAAGCTCGAGAATTGTTGAAAGTGTGGTGATCCTCAAATCTAGATAGAGAAAATGCATCTTTAACTTCACGAAACACCAAAAATATCCATTTGTTTGAAAGGGGAAAAGGAAAGAGAGAAAATTTGTAAGTTAGAGAATGGTAGAGCTAGTGTGAAAGAGCTGGAAAATTTTAAAGTAGTATTTAAGTTAACCTAGCTCTACTCTTGTTCCCTTCAAGAATCTGATTACCACGATAGCTTGATTGGATCCAACATCGGGTTTTTAGACTTGAAGTTGAGTTTTGGCTAGGGGAAGTTGAGTTGAAGACAAAACTCATACCGGAGGTCGGGGTCGACCTCAGCCCCTGACCCTTCTCGATCCTATGTTGGGTTCCATTTTCTTTTTTCTTTATTGTTATTGATTACATTTATTTGGTACAGTATGCACTGTGACAAATCTAAAACTACATTAAAGATAATTTTACATAACTAAACAAAGTTTTGTTTGAAGGGTGCATTTTTATTTTCGTAAGACTTGAATCACAATTTTTTTTTATTGCATAATTGAGAAAGATCAATGGGTATACATAATGTAATTAGAGTAACAATCTTCCAAATTTGCAAGCCATGCCTGATAATATATTGTGGAAACAAAATTTCTCCAGTGGAATATTAGGATCTTAATATGAGCCATTCGGCAAATGTTATGCTCACTTTGCCGATTAATTTGCTAGGGTGGAGCTTCTGGTTTAAGTTTATAAGCACAATGATTTACTGTCTTCATCTTTTTTTCATCTTCTAACTGGTATTGGCCAAAGCTGATCATGTATATATATAGTCCTAGTAGTCATCATAATTGATAACTAAATATTCACCATTTGTATTCCTTCCGTGAAATATGCAGATTTCATGGCCTACAAGAGTTCGATGAAACAAAAAGGAGTTGCCGGAAGCGGTTGGCTGGACACAACCAGCGGCGGCGGAAGAGCTCATCAGATCTCCATGGCGAAAGCTCAACCTAGCAATTAGCAGAATGATGAAAGAAGGGGAATTTTACATTAGCTCTCTTCATGTAACTTAGGCCCTTTCCCAATAATAATTTTCTATTGTTGGCCAATGCTCTTCCATTGACCATTATTACCAGATTTGCTTGCTCTCTCTCTTCTGTCAATCCCGTCTTTTGCTTTTGCTTTGTAGTTTGTACTAGAGACAATTAGTTGCACGTTTGTTAGGGAGGGTCTTGTGTATCTCAAACATTTCCATCCATAACCATTTGTGAAAATTATGGATGATTAATCCATTTGCAATGTCAAACAAGATTATGGGTTGCACTTGAACTTTGATTATTAATTCTTCATACATCATAAGATCA

mRNA sequence

ATTTTCTACTTAAAAGTAAGAAGAAAAAAAACCCAAAAAAATTTGGAAATTGTGGTCCTCAATCCTCACCTTTAGTACTATACTACTACTACAAATGTCCTCTGCAAGAAACCAATTTTTTGTTTCTTCTTTCTTTCTCTTTACTTCTTCTTCTTAATTATTACTCTCTCACTATAATCTCTCTGCATCTTTGGTTCAGCTTTTTTGTAATGGCGACTGGAAAAGCTGATGGAAAAAGGAGGCTAAGTTATTACGAAATGGAGGAAGAAGATGAAGAAGATGAAGAAGAAGATGAAGATGAGGAACAAGAAATCGATGCAGAATTAGGGTTTTCAGGGGATTTTAATAAGAAAAAGAAAATTTTTACATCTGGGGGTTCTTCTAATAAAAAATCCGCATCTGCCTTCGGTGGAGCTCCTGCGGCGGCGCCACCGCCCCCGTGTCAGGCCGATAATTGCAATGCCGATCTGTCTTCTTCTAAGCGGTACCACCGCCGTCATAAGGTCTGTGAGTTTCATGCTAAAGCTCCCGTGGTTCCGGTGACCGGAATCGACCAGCGGTTCTGTCAACAATGTAGCAGATTTCATGGCCTACAAGAGTTCGATGAAACAAAAAGGAGTTGCCGGAAGCGGTTGGCTGGACACAACCAGCGGCGGCGGAAGAGCTCATCAGATCTCCATGGCGAAAGCTCAACCTAGCAATTAGCAGAATGATGAAAGAAGGGGAATTTTACATTAGCTCTCTTCATGTAACTTAGGCCCTTTCCCAATAATAATTTTCTATTGTTGGCCAATGCTCTTCCATTGACCATTATTACCAGATTTGCTTGCTCTCTCTCTTCTGTCAATCCCGTCTTTTGCTTTTGCTTTGTAGTTTGTACTAGAGACAATTAGTTGCACGTTTGTTAGGGAGGGTCTTGTGTATCTCAAACATTTCCATCCATAACCATTTGTGAAAATTATGGATGATTAATCCATTTGCAATGTCAAACAAGATTATGGGTTGCACTTGAACTTTGATTATTAATTCTTCATACATCATAAGATCA

Coding sequence (CDS)

ATGGCGACTGGAAAAGCTGATGGAAAAAGGAGGCTAAGTTATTACGAAATGGAGGAAGAAGATGAAGAAGATGAAGAAGAAGATGAAGATGAGGAACAAGAAATCGATGCAGAATTAGGGTTTTCAGGGGATTTTAATAAGAAAAAGAAAATTTTTACATCTGGGGGTTCTTCTAATAAAAAATCCGCATCTGCCTTCGGTGGAGCTCCTGCGGCGGCGCCACCGCCCCCGTGTCAGGCCGATAATTGCAATGCCGATCTGTCTTCTTCTAAGCGGTACCACCGCCGTCATAAGGTCTGTGAGTTTCATGCTAAAGCTCCCGTGGTTCCGGTGACCGGAATCGACCAGCGGTTCTGTCAACAATGTAGCAGATTTCATGGCCTACAAGAGTTCGATGAAACAAAAAGGAGTTGCCGGAAGCGGTTGGCTGGACACAACCAGCGGCGGCGGAAGAGCTCATCAGATCTCCATGGCGAAAGCTCAACCTAG

Protein sequence

MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNKKSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST*
Homology
[Close]
BLAST of CsGy1G012280 vs. ExPASy Swiss-Prot
Match: Q38740 (Squamosa promoter-binding protein 2 OS=Antirrhinum majus OX=4151 GN=SBP2 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 9.3e-33
Identity = 80/143 (55.94%), Postives = 103/143 (72.03%), Query Frame = 0 

Query: 20  EDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFT---SGGSSNKKSASAFGGAPAAAPPP 79
           E+EE+ E++E+EEQE   ++ F+    KKKK+     SGG S +K  ++ GG  A    P
Sbjct: 27  EEEEEGEDEEEEEQERVVKVNFAESQLKKKKLNLGEGSGGKSGEKHTASGGGVVA---QP 86

Query: 80  PCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQQCSRFHGLQEFDETKR 139
            C  +NC ADL + K+Y++RH+VCE HAKAPVV V G+ QRFCQQCSRFH L EFD+TKR
Sbjct: 87  CCLVENCGADLRNCKKYYQRHRVCEVHAKAPVVSVEGLMQRFCQQCSRFHDLSEFDQTKR 146

Query: 140 SCRKRLAGHNQRRRKSSSDLHGE 160
           SCR+RLAGHN+RRRKSS + H E
Sbjct: 147 SCRRRLAGHNERRRKSSLESHKE 166

[Close]
BLAST of CsGy1G012280 vs. ExPASy Swiss-Prot
Match: P93015 (Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3 PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-30
Identity = 80/155 (51.61%), Postives = 102/155 (65.81%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK 60
           M   KA+GKR L     EEE+EE+E EDED  +E +A         KK+K          
Sbjct: 3   MRRSKAEGKRSLRELS-EEEEEEEETEDEDTFEEEEA-------LEKKQK---------G 62

Query: 61  KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ 120
           K+ S+ G          CQ ++C AD+S +K+YH+RHKVC+FHAKAP V ++G+ QRFCQ
Sbjct: 63  KATSSSG---------VCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQ 122

Query: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSD 156
           QCSRFH L EFDE KRSCR+RLAGHN+RRRKS++D
Sbjct: 123 QCSRFHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131

[Close]
BLAST of CsGy1G012280 vs. ExPASy Swiss-Prot
Match: Q38741 (Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.3e-29
Identity = 77/157 (49.04%), Postives = 97/157 (61.78%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK 60
           M T K +GKR +     +E+ EE+++  ED               +KK +  T  G    
Sbjct: 1   MDTSKGEGKRVIKLPGSQEQGEEEDDIGED---------------SKKTRALTPSG---- 60

Query: 61  KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ 120
           K AS        +    CQ +NC A+++++K YHRRHKVCEFHAKAPVV  +G+ QRFCQ
Sbjct: 61  KRAS-------GSTQRSCQVENCAAEMTNAKPYHRRHKVCEFHAKAPVVLHSGLQQRFCQ 120

Query: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLH 158
           QCSRFH L EFDE KRSCR+RLAGHN+RRRKSS D H
Sbjct: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSHDTH 131

[Close]
BLAST of CsGy1G012280 vs. ExPASy Swiss-Prot
Match: A2YFT9 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.1e-28
Identity = 62/89 (69.66%), Postives = 69/89 (77.53%), Query Frame = 0 

Query: 66  FGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQQCSRF 125
           FGG  A   PP CQA+ C ADLS +K YHRRHKVCE+HAKA VV  +G  QRFCQQCSRF
Sbjct: 171 FGG--AHHQPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRF 230

Query: 126 HGLQEFDETKRSCRKRLAGHNQRRRKSSS 155
           H L EFDE KRSCRKRLA HN+RRRK ++
Sbjct: 231 HVLTEFDEAKRSCRKRLAEHNRRRRKPAA 257

[Close]
BLAST of CsGy1G012280 vs. ExPASy Swiss-Prot
Match: Q0DAE8 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.1e-28
Identity = 62/89 (69.66%), Postives = 69/89 (77.53%), Query Frame = 0 

Query: 66  FGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQQCSRF 125
           FGG  A   PP CQA+ C ADLS +K YHRRHKVCE+HAKA VV  +G  QRFCQQCSRF
Sbjct: 171 FGG--AHHQPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRF 230

Query: 126 HGLQEFDETKRSCRKRLAGHNQRRRKSSS 155
           H L EFDE KRSCRKRLA HN+RRRK ++
Sbjct: 231 HVLTEFDEAKRSCRKRLAEHNRRRRKPAA 257

[Close]
BLAST of CsGy1G012280 vs. NCBI nr
Match: XP_011653273.1 (squamosa promoter-binding-like protein 3 [Cucumis sativus] >KGN64693.1 hypothetical protein Csa_013791 [Cucumis sativus])

HSP 1 Score: 313 bits (801), Expect = 3.08e-107
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK 60
           MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK
Sbjct: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK 60

Query: 61  KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ 120
           KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ
Sbjct: 61  KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ 120

Query: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162
           QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST
Sbjct: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162

[Close]
BLAST of CsGy1G012280 vs. NCBI nr
Match: XP_008442764.1 (PREDICTED: squamosa promoter-binding-like protein 3 [Cucumis melo])

HSP 1 Score: 272 bits (696), Expect = 3.73e-91
Identity = 146/167 (87.43%), Postives = 149/167 (89.22%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEE----DEDEEQEIDAE-LGFSGDFNKKKKIFTSG 60
           MATGKADGKRRL+YYEMEEEDEEDEEE    DEDEEQEID   LGFSGDFNKKKK+ TSG
Sbjct: 1   MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSG 60

Query: 61  GSSNKKSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGID 120
           GSSNKKS S FG  P AA PPPCQADNCNADLS SKRYHRRHKVCEFHAKAP V V GID
Sbjct: 61  GSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGID 120

Query: 121 QRFCQQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162
           QRFCQQCSRFHGLQEFD+TKRSCRKRLAGHNQRRRKSSSDLHGESST
Sbjct: 121 QRFCQQCSRFHGLQEFDDTKRSCRKRLAGHNQRRRKSSSDLHGESST 167

[Close]
BLAST of CsGy1G012280 vs. NCBI nr
Match: XP_038894994.1 (squamosa promoter-binding-like protein 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 252 bits (643), Expect = 3.88e-83
Identity = 136/166 (81.93%), Postives = 144/166 (86.75%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEE----QEIDAELGFSGDFNKKKKIFTSGG 60
           MATGKADGKRRL+YYEMEEE+EEDEEE+E+EE    Q+I  ELGF+GDFNKKKKI TSG 
Sbjct: 1   MATGKADGKRRLNYYEMEEEEEEDEEEEEEEEDHEEQQIHGELGFAGDFNKKKKILTSGT 60

Query: 61  SSNKKSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQ 120
           SSNKKS S +GGA AA   P CQADNCNADLS SKRYHRRHKVCEFHAKAP V V GI Q
Sbjct: 61  SSNKKSGSGYGGAAAA---PSCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIHQ 120

Query: 121 RFCQQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162
           RFCQQCSRFHGLQEFDE KRSCRKRLAGHNQRRRKSSSD+HGES T
Sbjct: 121 RFCQQCSRFHGLQEFDEAKRSCRKRLAGHNQRRRKSSSDVHGESPT 163

[Close]
BLAST of CsGy1G012280 vs. NCBI nr
Match: XP_022927387.1 (squamosa promoter-binding-like protein 3 isoform X1 [Cucurbita moschata] >KAG6583985.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235 bits (600), Expect = 1.09e-76
Identity = 128/162 (79.01%), Postives = 136/162 (83.95%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK 60
           MATGKADGKRRL+YY+MEEE+EE+EEE E     +D ELGF GDFNKKKK   SGG SNK
Sbjct: 1   MATGKADGKRRLNYYDMEEEEEEEEEEVE----VVDGELGFGGDFNKKKKTLCSGGGSNK 60

Query: 61  KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ 120
           KS S +GGA  AAP   CQADNCNADLSSSKRYH RHKVCEFHAKA  V V GI QRFCQ
Sbjct: 61  KSGSGYGGAATAAPS--CQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIHQRFCQ 120

Query: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162
           QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSD+HG +ST
Sbjct: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDVHGGTST 156

[Close]
BLAST of CsGy1G012280 vs. NCBI nr
Match: XP_023001757.1 (squamosa promoter-binding-like protein 3 [Cucurbita maxima])

HSP 1 Score: 234 bits (597), Expect = 3.01e-76
Identity = 126/162 (77.78%), Postives = 136/162 (83.95%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK 60
           MATGKADGKRRL+YY+MEEE+EE+EE      + +D ELGF GDFNKKKK  +SGG SNK
Sbjct: 1   MATGKADGKRRLNYYDMEEEEEEEEEV-----EVVDGELGFGGDFNKKKKTLSSGGGSNK 60

Query: 61  KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ 120
           KS S +GGA  AAP   CQADNCNADLSSSKRYH RHKVCEFHAKA  V V GI QRFCQ
Sbjct: 61  KSGSGYGGAATAAPS--CQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIHQRFCQ 120

Query: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162
           QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSD+HG +ST
Sbjct: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDVHGGTST 155

[Close]
BLAST of CsGy1G012280 vs. ExPASy TrEMBL
Match: A0A0A0LSD9 (Squamosa promoter-binding-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G074980 PE=4 SV=1)

HSP 1 Score: 313 bits (801), Expect = 1.49e-107
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK 60
           MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK
Sbjct: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK 60

Query: 61  KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ 120
           KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ
Sbjct: 61  KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ 120

Query: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162
           QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST
Sbjct: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162

[Close]
BLAST of CsGy1G012280 vs. ExPASy TrEMBL
Match: A0A1S3B6H6 (squamosa promoter-binding-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103486540 PE=4 SV=1)

HSP 1 Score: 272 bits (696), Expect = 1.80e-91
Identity = 146/167 (87.43%), Postives = 149/167 (89.22%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEE----DEDEEQEIDAE-LGFSGDFNKKKKIFTSG 60
           MATGKADGKRRL+YYEMEEEDEEDEEE    DEDEEQEID   LGFSGDFNKKKK+ TSG
Sbjct: 1   MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSG 60

Query: 61  GSSNKKSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGID 120
           GSSNKKS S FG  P AA PPPCQADNCNADLS SKRYHRRHKVCEFHAKAP V V GID
Sbjct: 61  GSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGID 120

Query: 121 QRFCQQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162
           QRFCQQCSRFHGLQEFD+TKRSCRKRLAGHNQRRRKSSSDLHGESST
Sbjct: 121 QRFCQQCSRFHGLQEFDDTKRSCRKRLAGHNQRRRKSSSDLHGESST 167

[Close]
BLAST of CsGy1G012280 vs. ExPASy TrEMBL
Match: A0A6J1EH14 (Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434224 PE=4 SV=1)

HSP 1 Score: 235 bits (600), Expect = 5.27e-77
Identity = 128/162 (79.01%), Postives = 136/162 (83.95%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK 60
           MATGKADGKRRL+YY+MEEE+EE+EEE E     +D ELGF GDFNKKKK   SGG SNK
Sbjct: 1   MATGKADGKRRLNYYDMEEEEEEEEEEVE----VVDGELGFGGDFNKKKKTLCSGGGSNK 60

Query: 61  KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ 120
           KS S +GGA  AAP   CQADNCNADLSSSKRYH RHKVCEFHAKA  V V GI QRFCQ
Sbjct: 61  KSGSGYGGAATAAPS--CQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIHQRFCQ 120

Query: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162
           QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSD+HG +ST
Sbjct: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDVHGGTST 156

[Close]
BLAST of CsGy1G012280 vs. ExPASy TrEMBL
Match: A0A6J1KHJ1 (Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC111495800 PE=4 SV=1)

HSP 1 Score: 234 bits (597), Expect = 1.46e-76
Identity = 126/162 (77.78%), Postives = 136/162 (83.95%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK 60
           MATGKADGKRRL+YY+MEEE+EE+EE      + +D ELGF GDFNKKKK  +SGG SNK
Sbjct: 1   MATGKADGKRRLNYYDMEEEEEEEEEV-----EVVDGELGFGGDFNKKKKTLSSGGGSNK 60

Query: 61  KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ 120
           KS S +GGA  AAP   CQADNCNADLSSSKRYH RHKVCEFHAKA  V V GI QRFCQ
Sbjct: 61  KSGSGYGGAATAAPS--CQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIHQRFCQ 120

Query: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162
           QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSD+HG +ST
Sbjct: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDVHGGTST 155

[Close]
BLAST of CsGy1G012280 vs. ExPASy TrEMBL
Match: A0A6J1GT00 (Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456848 PE=4 SV=1)

HSP 1 Score: 231 bits (590), Expect = 2.14e-75
Identity = 126/163 (77.30%), Postives = 135/163 (82.82%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK 60
           M TGKADGKRRL+YY++EEED+E+EEE  DEE++ D ELGF  DFNKKKKI   GGSSNK
Sbjct: 1   MVTGKADGKRRLNYYDVEEEDDEEEEE-ADEEEDGDGELGFGEDFNKKKKIVDGGGSSNK 60

Query: 61  KSASAFGGAPAAAP---PPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQR 120
            S S +GGA A A     P CQADNCNADLS SKRYHRRHKVCEFHAKAP V V GI QR
Sbjct: 61  GSGSGYGGAAATAAVAVAPSCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVVVAGIHQR 120

Query: 121 FCQQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGES 160
           FCQQCSRFHGL EFD TKRSCRKRLAGHNQRRRKSSSD+HGES
Sbjct: 121 FCQQCSRFHGLMEFDLTKRSCRKRLAGHNQRRRKSSSDVHGES 162

[Close]
BLAST of CsGy1G012280 vs. TAIR 10
Match: AT2G33810.1 (squamosa promoter binding protein-like 3 )

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 80/155 (51.61%), Postives = 102/155 (65.81%), Query Frame = 0 

Query: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNK 60
           M   KA+GKR L     EEE+EE+E EDED  +E +A         KK+K          
Sbjct: 3   MRRSKAEGKRSLRELS-EEEEEEEETEDEDTFEEEEA-------LEKKQK---------G 62

Query: 61  KSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQ 120
           K+ S+ G          CQ ++C AD+S +K+YH+RHKVC+FHAKAP V ++G+ QRFCQ
Sbjct: 63  KATSSSG---------VCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQ 122

Query: 121 QCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSD 156
           QCSRFH L EFDE KRSCR+RLAGHN+RRRKS++D
Sbjct: 123 QCSRFHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131

[Close]
BLAST of CsGy1G012280 vs. TAIR 10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8 )

HSP 1 Score: 120.9 bits (302), Expect = 9.3e-28
Identity = 58/92 (63.04%), Postives = 66/92 (71.74%), Query Frame = 0 

Query: 60  KKSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFC 119
           ++S     G   +   P CQA+ CNADLS +K YHRRHKVCEFH+KA  V   G+ QRFC
Sbjct: 170 RRSRPGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFC 229

Query: 120 QQCSRFHGLQEFDETKRSCRKRLAGHNQRRRK 152
           QQCSRFH L EFD  KRSCRKRLA HN+RRRK
Sbjct: 230 QQCSRFHLLSEFDNGKRSCRKRLADHNRRRRK 261

[Close]
BLAST of CsGy1G012280 vs. TAIR 10
Match: AT3G15270.1 (squamosa promoter binding protein-like 5 )

HSP 1 Score: 120.9 bits (302), Expect = 9.3e-28
Identity = 66/134 (49.25%), Postives = 82/134 (61.19%), Query Frame = 0 

Query: 28  DEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNKKSASAFGGAPAAAPPPPCQADNCNADL 87
           +E+ E  +D E    GD +K+KK+               G +    P   CQ D C  +L
Sbjct: 23  EEEMENGMDGEEEDGGDEDKRKKVM----------ERVRGPSTDRVPSRLCQVDRCTVNL 82

Query: 88  SSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQQCSRFHGLQEFDETKRSCRKRLAGHNQ 147
           + +K+Y+RRH+VCE HAKA    V G+ QRFCQQCSRFH L EFDE KRSCR+RLAGHN+
Sbjct: 83  TEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRSCRRRLAGHNE 142

Query: 148 RRRKSSSDLHGESS 162
           RRRK S D  GE S
Sbjct: 143 RRRKISGDSFGEGS 146

[Close]
BLAST of CsGy1G012280 vs. TAIR 10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-27
Identity = 78/159 (49.06%), Postives = 99/159 (62.26%), Query Frame = 0 

Query: 7   DGKRRLSYYEMEEED---EEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNKKSA 66
           +GKR      M+++    EED E D DEE+E+            + ++  S GS N+   
Sbjct: 2   EGKRSQGQGYMKKKSYLVEEDMETDTDEEEEVG-----------RDRVRGSRGSINR--- 61

Query: 67  SAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQQCS 126
              GG+        CQ D C AD+  +K YHRRHKVCE HAKA  V ++G++QRFCQQCS
Sbjct: 62  ---GGSLRL-----CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCS 121

Query: 127 RFHGLQEFDETKRSCRKRLAGHNQRRRKSSSD-LHGESS 162
           RFH LQEFDE KRSCR+RLAGHN+RRRKSS +  +GE S
Sbjct: 122 RFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGS 138

[Close]
BLAST of CsGy1G012280 vs. TAIR 10
Match: AT1G53160.1 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-27
Identity = 78/159 (49.06%), Postives = 99/159 (62.26%), Query Frame = 0 

Query: 7   DGKRRLSYYEMEEED---EEDEEEDEDEEQEIDAELGFSGDFNKKKKIFTSGGSSNKKSA 66
           +GKR      M+++    EED E D DEE+E+            + ++  S GS N+   
Sbjct: 2   EGKRSQGQGYMKKKSYLVEEDMETDTDEEEEVG-----------RDRVRGSRGSINR--- 61

Query: 67  SAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQRFCQQCS 126
              GG+        CQ D C AD+  +K YHRRHKVCE HAKA  V ++G++QRFCQQCS
Sbjct: 62  ---GGSLRL-----CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCS 121

Query: 127 RFHGLQEFDETKRSCRKRLAGHNQRRRKSSSD-LHGESS 162
           RFH LQEFDE KRSCR+RLAGHN+RRRKSS +  +GE S
Sbjct: 122 RFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGS 138

The following BLAST results are available for this feature:
BLAST of CsGy1G012280 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q387409.3e-3355.94Squamosa promoter-binding protein 2 OS=Antirrhinum majus OX=4151 GN=SBP2 PE=2 SV... [more]
P930151.9e-3051.61Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3... [more]
Q387416.3e-2949.04Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV... [more]
A2YFT93.1e-2869.66Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946... [more]
Q0DAE83.1e-2869.66Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=399... [more]
BLAST of CsGy1G012280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011653273.13.08e-107100.00squamosa promoter-binding-like protein 3 [Cucumis sativus] >KGN64693.1 hypotheti... [more]
XP_008442764.13.73e-9187.43PREDICTED: squamosa promoter-binding-like protein 3 [Cucumis melo][more]
XP_038894994.13.88e-8381.93squamosa promoter-binding-like protein 3 isoform X1 [Benincasa hispida][more]
XP_022927387.11.09e-7679.01squamosa promoter-binding-like protein 3 isoform X1 [Cucurbita moschata] >KAG658... [more]
XP_023001757.13.01e-7677.78squamosa promoter-binding-like protein 3 [Cucurbita maxima][more]
BLAST of CsGy1G012280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSD91.49e-107100.00Squamosa promoter-binding-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G07498... [more]
A0A1S3B6H61.80e-9187.43squamosa promoter-binding-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103486540... [more]
A0A6J1EH145.27e-7779.01Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A6J1KHJ11.46e-7677.78Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC1114958... [more]
A0A6J1GT002.14e-7577.30Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
BLAST of CsGy1G012280 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G33810.11.4e-3151.61squamosa promoter binding protein-like 3 [more]
AT1G02065.19.3e-2863.04squamosa promoter binding protein-like 8 [more]
AT3G15270.19.3e-2849.25squamosa promoter binding protein-like 5 [more]
AT1G53160.22.7e-2749.06squamosa promoter binding protein-like 4 [more]
AT1G53160.12.7e-2749.06squamosa promoter binding protein-like 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017238Squamosa promoter-binding proteinPIRSFPIRSF037575SBPcoord: 3..162
e-value: 7.1E-55
score: 183.0
IPR004333SBP domainPFAMPF03110SBPcoord: 78..151
e-value: 1.6E-32
score: 111.6
IPR004333SBP domainPROSITEPS51141ZF_SBPcoord: 75..152
score: 31.786667
IPR036893SBP domain superfamilyGENE3D4.10.1100.10coord: 71..139
e-value: 5.7E-33
score: 114.9
IPR036893SBP domain superfamilySUPERFAMILY103612SBT domaincoord: 76..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..85
NoneNo IPR availablePANTHERPTHR31251:SF134SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 3coord: 21..157
IPR044817Squamosa promoter-binding-like proteinPANTHERPTHR31251SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4coord: 21..157

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G012280.2CsGy1G012280.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009908 flower development
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046872 metal ion binding