CsGy1G011540 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G011540
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	B box-type domain-containing protein
Location	Gy14Chr1: 7239729 .. 7241440 (+)
RNA-Seq Expression	CsGy1G011540
Synteny	CsGy1G011540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGAGGATTATCAGGAAAAGATGTCGTTTTATTCAAAGATTTCTTCCCTGAAATGTTGGAGAAACTGGGAGCTAAAGGGTTCATTAAGGAATTGAGATATGGGTTTCGCTTGCTGATGGATAAAGAAAAAGGTGTCATAACTGCAGAGAGTTTGAGAAAAAACATGAGATTTTTTGGATTAGTATTAGAAGATGAAGAAGTGATGTGGATGGTTAAAGAAGGAGATTTGGATGGAGATGGAGCTTTGAGTGAAGCTGAATTTTTTATTCTTATGATCAAACTTAGCCCTGGATTCATGCATTTATCTTCATCTTTCTTTCATCAATCTCATTCGGATAGAAAGTTTACCAAATAATACAACTTTGTATATATTAATGTGTTTTCGTTTTCATTTACTTTTTTCCTCTCTCTCTCTCCTCTTGTTACATGTATATTATATTACCTAAATAAAGTTTGTTTGATATTTGAGTATTATTTAATCTATATGAGTTGTACTTTATTTATTTTTATATTAGATATGTTTTATCATATTCTTATAATAAAGTTTGTATTGCACGTTTTATGTGGATAGACATGAGAGGAAAAAGACTAAATTATTGTTTTAAGAAATCAATTAAAAGAGTAAGGAAAATATAACAACAAAAATTAGGAGACCAAAAAATTATTCTTTTTCCTATAATTAACTTACTTTAAAGTTTTGGGACATGTTTTAATTTAATTTAACCTATATTATCCACAACCGTTCTTTTATCCATACCAATATGTTTAGGGTTAAAAGCTAGTAGTGACACAATGAAGAAAGAACTATTGGACTAAGTGTGTATATATATATATACTGAAAAATAGGAAATGTAAAAAGTATTATGATGTGAGGAGAAATGTTTTATTTTTTGTAATTAGGTATAAACATGTGTGCATTTGGTAAAATTAGGAATGATGAGATGACACAAAACTGAAATCCATAATAAATCTTACAAAATAAGCAAATCGAATAATTTGAAAGTGAGAAAAAAATGAGAGAAATGAGACCCATATTCTATTATTAATAATAATAATCCATATCCCCCTGCTTCAATACATGGCAAACACACACAGGTTTCTCCATAATACAATTCTCCATATAATGGGACCCAAATTTCCCCTCTTATGTCCAATCATAAACACATTAATTATACACATTTCTTTAATTTAACAACCAACTTGCACACAAACCAAACCAAACCAAACCCCCTCCTCTCACCTCTGTTATTTTAAACCAGTGCCCCAAAAGGATCCAATGCCCTCCTCACAAGAGAATCTGAATCCAATCCCGGAGATTTGGAGTTGAAATTTATGAAGAACATCAAGTGCGAGCTTTGCGATTGTAGAGCCAATGCGTATTGTGAATCGGACGAATCCAGTTTGTGTTGGAGCTGCGATGCTAATGTTCACTCAGCTAATTTCATTGTTGAAAAGCATTCAAGGATTTTGCTTTGCCAAATTTGCCAATCTCCCACTCCTTGGACTGCCACTGGCCCCAAGCTTGGCCCTACTCTTTCTCTTTGTCAGCTTTGCGTTCTTCCTCAAAATGTTGCTTCCCTAAGATTTCGTCATCAGGATCCTCTCCATTCTGGCTCCTCTACTACCAGAGATTTTGATCATCATCCTAATGAGGATGATGAAGAGAATCAAGTGGTTCCACTGTCACCGCCGCCGGTTTCGAGCTAG

mRNA sequence

ATGGGAGGAGGATTATCAGGAAAAGATGTCGTTTTATTCAAAGATTTCTTCCCTGAAATGTTGGAGAAACTGGGAGCTAAAGGGTTCATTAAGGAATTGAGATATGGGTTTCGCTTGCTGATGGATAAAGAAAAAGGTGTCATAACTGCAGAGAGTTTGAGAAAAAACATGAGATTTTTTGGATTAGTATTAGAAGATGAAGAAGTGATGTGGATGGTTAAAGAAGGAGATTTGGATGGAGATGGAGCTTTGAGTGAAGCTGAATTTTTTATTCTTATGATCAAACTTAGCCCTGGATTCATGCATTTATCTTCATCTTTCTTTCATCAATCTCATTCGGATAGAAATGCCCCAAAAGGATCCAATGCCCTCCTCACAAGAGAATCTGAATCCAATCCCGGAGATTTGGAGTTGAAATTTATGAAGAACATCAAGTGCGAGCTTTGCGATTGTAGAGCCAATGCGTATTGTGAATCGGACGAATCCAGTTTGTGTTGGAGCTGCGATGCTAATGTTCACTCAGCTAATTTCATTGTTGAAAAGCATTCAAGGATTTTGCTTTGCCAAATTTGCCAATCTCCCACTCCTTGGACTGCCACTGGCCCCAAGCTTGGCCCTACTCTTTCTCTTTGTCAGCTTTGCGTTCTTCCTCAAAATGTTGCTTCCCTAAGATTTCGTCATCAGGATCCTCTCCATTCTGGCTCCTCTACTACCAGAGATTTTGATCATCATCCTAATGAGGATGATGAAGAGAATCAAGTGGTTCCACTGTCACCGCCGCCGGTTTCGAGCTAG

Coding sequence (CDS)

ATGGGAGGAGGATTATCAGGAAAAGATGTCGTTTTATTCAAAGATTTCTTCCCTGAAATGTTGGAGAAACTGGGAGCTAAAGGGTTCATTAAGGAATTGAGATATGGGTTTCGCTTGCTGATGGATAAAGAAAAAGGTGTCATAACTGCAGAGAGTTTGAGAAAAAACATGAGATTTTTTGGATTAGTATTAGAAGATGAAGAAGTGATGTGGATGGTTAAAGAAGGAGATTTGGATGGAGATGGAGCTTTGAGTGAAGCTGAATTTTTTATTCTTATGATCAAACTTAGCCCTGGATTCATGCATTTATCTTCATCTTTCTTTCATCAATCTCATTCGGATAGAAATGCCCCAAAAGGATCCAATGCCCTCCTCACAAGAGAATCTGAATCCAATCCCGGAGATTTGGAGTTGAAATTTATGAAGAACATCAAGTGCGAGCTTTGCGATTGTAGAGCCAATGCGTATTGTGAATCGGACGAATCCAGTTTGTGTTGGAGCTGCGATGCTAATGTTCACTCAGCTAATTTCATTGTTGAAAAGCATTCAAGGATTTTGCTTTGCCAAATTTGCCAATCTCCCACTCCTTGGACTGCCACTGGCCCCAAGCTTGGCCCTACTCTTTCTCTTTGTCAGCTTTGCGTTCTTCCTCAAAATGTTGCTTCCCTAAGATTTCGTCATCAGGATCCTCTCCATTCTGGCTCCTCTACTACCAGAGATTTTGATCATCATCCTAATGAGGATGATGAAGAGAATCAAGTGGTTCCACTGTCACCGCCGCCGGTTTCGAGCTAG

Protein sequence

MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSHSDRNAPKGSNALLTRESESNPGDLELKFMKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFDHHPNEDDEENQVVPLSPPPVSS*

Homology

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BLAST of CsGy1G011540 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-19
Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 0


Query: 13  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKN-MRFFGL-VLEDEEVM 72
           F+DFFP M  KLG +G I+E+  GF LLMDK+KGVIT ESLR+N     GL  L D++V 
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 73  WMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLS 105
           +M+ EGD D DGAL++ EF +LM +LSP  M  S
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEAS 112

[Close]

BLAST of CsGy1G011540 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.8e-18
Identity = 53/94 (56.38%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 13  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKN-MRFFGL-VLEDEEVM 72
           F DF P M   LG +G I EL  GF LLMD+EKGVIT ESLR+N     GL  L DE+V 
Sbjct: 19  FHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDVR 78

Query: 73  WMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLS 105
            M+KEGD D DGAL++ EF +LM +LSP  M  S
Sbjct: 79  CMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEAS 112

[Close]

BLAST of CsGy1G011540 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 8.9e-17
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 13  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLV-LEDEEVMW 72
           ++D  P M EK+  + F+ EL  GF LL D E+ +ITAESLR+N    G+  +  E+   
Sbjct: 22  YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81

Query: 73  MVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQS 112
           MV+EGDLDGDGAL++ EF +LM++LSP  M  + ++  ++
Sbjct: 82  MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKA 121

[Close]

BLAST of CsGy1G011540 vs. ExPASy Swiss-Prot
Match: P43645 (Caltractin (Fragment) OS=Spermatozopsis similis OX=3192 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.2e-10
Identity = 34/91 (37.36%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 7   GKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLED 66
           G   + F++F   M  K+G +   +E+   FRL  D + G IT ++L++  +  G  L D
Sbjct: 56  GSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDQTGKITFKNLKRVAKELGENLTD 115

Query: 67  EEVMWMVKEGDLDGDGALSEAEFFILMIKLS 98
           EE+  M+ E D DGDG ++E EFF +M K S
Sbjct: 116 EEIQEMIDEADRDGDGEINEEEFFRIMKKTS 146

[Close]

BLAST of CsGy1G011540 vs. ExPASy Swiss-Prot
Match: Q06827 (Caltractin OS=Scherffelia dubia OX=3190 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09
Identity = 33/91 (36.26%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 7   GKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLVLED 66
           G   + F++F   M  K+G +   +E+   FRL  D E G I+ ++L++  +  G  + D
Sbjct: 76  GSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTD 135

Query: 67  EEVMWMVKEGDLDGDGALSEAEFFILMIKLS 98
           EE+  M+ E D DGDG ++E EFF +M K S
Sbjct: 136 EELQEMIDEADRDGDGEVNEEEFFRIMKKTS 166

[Close]

BLAST of CsGy1G011540 vs. NCBI nr
Match: KAE8652697.1 (hypothetical protein Csa_014317 [Cucumis sativus])

HSP 1 Score: 544 bits (1401), Expect = 2.50e-195
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFF 60
           MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFF
Sbjct: 1   MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFF 60

Query: 61  GLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSHSDRNAPKG 120
           GLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSHSDRNAPKG
Sbjct: 61  GLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSHSDRNAPKG 120

Query: 121 SNALLTRESESNPGDLELKFMKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVE 180
           SNALLTRESESNPGDLELKFMKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVE
Sbjct: 121 SNALLTRESESNPGDLELKFMKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVE 180

Query: 181 KHSRILLCQICQSPTPWTATGPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRD 240
           KHSRILLCQICQSPTPWTATGPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRD
Sbjct: 181 KHSRILLCQICQSPTPWTATGPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRD 240

Query: 241 FDHHPNEDDEENQVVPLSPPPVSS 264
           FDHHPNEDDEENQVVPLSPPPVSS
Sbjct: 241 FDHHPNEDDEENQVVPLSPPPVSS 264

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BLAST of CsGy1G011540 vs. NCBI nr
Match: XP_008441923.1 (PREDICTED: B-box zinc finger protein 32-like [Cucumis melo] >KAA0056935.1 B-box zinc finger protein 32-like [Cucumis melo var. makuwa] >TYK26363.1 B-box zinc finger protein 32-like [Cucumis melo var. makuwa])

HSP 1 Score: 258 bits (659), Expect = 3.78e-84
Identity = 123/141 (87.23%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 126 TRESESNPGDLELKFMKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRI 185
           ++ESESNP DLELK MKNIKCELCDCRANAYCESDE+SLCWSCD+NVHSANFIVEKHSRI
Sbjct: 4   SQESESNPRDLELKIMKNIKCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKHSRI 63

Query: 186 LLCQICQSPTPWTATGPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFDH-- 245
           LLCQICQSPTPWTATGPKLGPTLSLCQ CV+PQNVASL+F HQD LHSGSSTTRDFDH  
Sbjct: 64  LLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDHLHSGSSTTRDFDHRH 123

Query: 246 HPNEDDEENQVVPLSPPPVSS 264
           H + DDEENQVVPLSPPP  S
Sbjct: 124 HHSGDDEENQVVPLSPPPPVS 144

[Close]

BLAST of CsGy1G011540 vs. NCBI nr
Match: XP_038895968.1 (zinc finger protein CONSTANS-LIKE 9-like [Benincasa hispida])

HSP 1 Score: 238 bits (608), Expect = 1.98e-76
Identity = 110/140 (78.57%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 126 TRESESNPGDLELKFMKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRI 185
           ++ES+SNP DLE K MK IKCELCDCRANAYCESD++SLCWSCDANVHSANFIVEKHSRI
Sbjct: 4   SQESDSNPRDLEFKIMKKIKCELCDCRANAYCESDQASLCWSCDANVHSANFIVEKHSRI 63

Query: 186 LLCQICQSPTPWTATGPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFDHHP 245
           LLCQICQSPTPWTATGPKLGPT+SLCQ CV+PQNV SL+  HQ+  HS SS++RDF HH 
Sbjct: 64  LLCQICQSPTPWTATGPKLGPTISLCQFCVIPQNVGSLQIHHQNHRHSASSSSRDFHHHH 123

Query: 246 NE-DDEENQVVPLSPPPVSS 264
           +  DDE+NQVVP+SPPP SS
Sbjct: 124 HAADDEQNQVVPMSPPPTSS 143

[Close]

BLAST of CsGy1G011540 vs. NCBI nr
Match: KAF9683447.1 (hypothetical protein SADUNF_Sadunf04G0014600 [Salix dunnii])

HSP 1 Score: 217 bits (553), Expect = 3.50e-66
Identity = 114/238 (47.90%), Postives = 154/238 (64.71%), Query Frame = 0


Query: 5   LSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLV- 64
           ++ +  ++F+DFFP M++KLGA+GF+KEL  GF+LL+D++KG+IT ESLR+N +  GL  
Sbjct: 1   MASRSGIVFEDFFPAMVDKLGAEGFMKELCNGFQLLVDEDKGLITFESLRRNSKLLGLQD 60

Query: 65  LEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSHSDR-------- 124
           + D+E+  M++EGDLDGDGAL+E EF  LM +LSPG M  S  +  ++ +          
Sbjct: 61  MTDDELRCMLREGDLDGDGALTEMEFCTLMFRLSPGLMMDSRKWLAEAIASEITLLCHVG 120

Query: 125 --------NAPK----------GSNALLTRESESNPGDLELKFMKNIKCELCDCRANAYC 184
                     P+          G +    RE +   G  + K MK  +CELCD  A  +C
Sbjct: 121 QTLTPWTGTGPELGPSLPVCDIGVDNSSCREEKRLGGRSKRKEMK--RCELCDSLAKMFC 180

Query: 185 ESDESSLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKLGPTLSLCQLCV 215
           ESD++SLCW CDANVHSANF+V KHSR LLC +CQS TPWT TGPKLGPTLS+C  C+
Sbjct: 181 ESDQASLCWDCDANVHSANFLVTKHSRTLLCHVCQSLTPWTGTGPKLGPTLSVCNNCI 236

[Close]

BLAST of CsGy1G011540 vs. NCBI nr
Match: KAA0056934.1 (calcium-binding protein PBP1 [Cucumis melo var. makuwa] >TYK26362.1 calcium-binding protein PBP1 [Cucumis melo var. makuwa])

HSP 1 Score: 210 bits (535), Expect = 1.15e-65
Identity = 104/117 (88.89%), Postives = 108/117 (92.31%), Query Frame = 0


Query: 3   GGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGL 62
           GG+SG  VV+FKDFFP+MLEKLG KGFIKELR GF LLMDKEKGVITAESLRKNMRFFGL
Sbjct: 5   GGVSGNGVVIFKDFFPDMLEKLGVKGFIKELRCGFGLLMDKEKGVITAESLRKNMRFFGL 64

Query: 63  VLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSHSDRNAPK 119
           VLEDEEVMWMV+EGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSH DR   K
Sbjct: 65  VLEDEEVMWMVREGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSHLDRKFTK 121

[Close]

BLAST of CsGy1G011540 vs. ExPASy TrEMBL
Match: A0A0A0LS80 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071810 PE=4 SV=1)

HSP 1 Score: 266 bits (680), Expect = 5.79e-88
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 141 MKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTAT 200
           MKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTAT
Sbjct: 1   MKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTAT 60

Query: 201 GPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFDHHPNEDDEENQVVPLSPP 260
           GPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFDHHPNEDDEENQVVPLSPP
Sbjct: 61  GPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFDHHPNEDDEENQVVPLSPP 120

Query: 261 PVSS 264
           PVSS
Sbjct: 121 PVSS 124

[Close]

BLAST of CsGy1G011540 vs. ExPASy TrEMBL
Match: A0A5A7UTR2 (B-box zinc finger protein 32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00230 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 1.83e-84
Identity = 123/141 (87.23%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 126 TRESESNPGDLELKFMKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRI 185
           ++ESESNP DLELK MKNIKCELCDCRANAYCESDE+SLCWSCD+NVHSANFIVEKHSRI
Sbjct: 4   SQESESNPRDLELKIMKNIKCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKHSRI 63

Query: 186 LLCQICQSPTPWTATGPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFDH-- 245
           LLCQICQSPTPWTATGPKLGPTLSLCQ CV+PQNVASL+F HQD LHSGSSTTRDFDH  
Sbjct: 64  LLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDHLHSGSSTTRDFDHRH 123

Query: 246 HPNEDDEENQVVPLSPPPVSS 264
           H + DDEENQVVPLSPPP  S
Sbjct: 124 HHSGDDEENQVVPLSPPPPVS 144

[Close]

BLAST of CsGy1G011540 vs. ExPASy TrEMBL
Match: A0A1S3B4I3 (B-box zinc finger protein 32-like OS=Cucumis melo OX=3656 GN=LOC103485915 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 1.83e-84
Identity = 123/141 (87.23%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 126 TRESESNPGDLELKFMKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRI 185
           ++ESESNP DLELK MKNIKCELCDCRANAYCESDE+SLCWSCD+NVHSANFIVEKHSRI
Sbjct: 4   SQESESNPRDLELKIMKNIKCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKHSRI 63

Query: 186 LLCQICQSPTPWTATGPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFDH-- 245
           LLCQICQSPTPWTATGPKLGPTLSLCQ CV+PQNVASL+F HQD LHSGSSTTRDFDH  
Sbjct: 64  LLCQICQSPTPWTATGPKLGPTLSLCQFCVVPQNVASLQFHHQDHLHSGSSTTRDFDHRH 123

Query: 246 HPNEDDEENQVVPLSPPPVSS 264
           H + DDEENQVVPLSPPP  S
Sbjct: 124 HHSGDDEENQVVPLSPPPPVS 144

[Close]

BLAST of CsGy1G011540 vs. ExPASy TrEMBL
Match: A0A0A0LV00 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071800 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 4.07e-75
Identity = 116/119 (97.48%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFF 60
           MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFF
Sbjct: 1   MGGGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFF 60

Query: 61  GLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSHSDRNAPK 119
           GLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSHSDR   K
Sbjct: 61  GLVLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSHSDRKFTK 119

[Close]

BLAST of CsGy1G011540 vs. ExPASy TrEMBL
Match: A0A5A7UNY8 (Calcium-binding protein PBP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00220 PE=4 SV=1)

HSP 1 Score: 210 bits (535), Expect = 5.56e-66
Identity = 104/117 (88.89%), Postives = 108/117 (92.31%), Query Frame = 0


Query: 3   GGLSGKDVVLFKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGL 62
           GG+SG  VV+FKDFFP+MLEKLG KGFIKELR GF LLMDKEKGVITAESLRKNMRFFGL
Sbjct: 5   GGVSGNGVVIFKDFFPDMLEKLGVKGFIKELRCGFGLLMDKEKGVITAESLRKNMRFFGL 64

Query: 63  VLEDEEVMWMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSHSDRNAPK 119
           VLEDEEVMWMV+EGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSH DR   K
Sbjct: 65  VLEDEEVMWMVREGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQSHLDRKFTK 121

[Close]

BLAST of CsGy1G011540 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein )

HSP 1 Score: 112.5 bits (280), Expect = 5.4e-25
Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 145 KCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 204
           KCELC   A  YCESD++SLCW CD  VH ANF+V KH R LLC  CQS TPW A+G  L
Sbjct: 5   KCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLNL 64

Query: 205 GPTLSLCQLCVL--PQNVASLRFRHQ-----DPLHSGSSTTRDFDHHPNEDDE----ENQ 257
           GPT+S+C+ C+     N +SL  R Q     + +   +     +D   +ED+E    ENQ
Sbjct: 65  GPTVSICESCLARKKNNNSSLAGRDQNLNQEEEIIGCNDGAESYDEESDEDEEEEEVENQ 124

[Close]

BLAST of CsGy1G011540 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein )

HSP 1 Score: 109.0 bits (271), Expect = 5.9e-24
Identity = 56/116 (48.28%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 145 KCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGPKL 204
           KC+LC+  A  YCESD++SLCW CD  VH ANF+V KH+R LLC  CQS TPW ATG +L
Sbjct: 4   KCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATGLRL 63

Query: 205 GPTLSLCQLCVLPQNVASLR-------FRHQDPLHS-GSSTTRDFDHHPNEDDEEN 253
           GPT S+C+ CV  +N    R        R Q+ ++S  S   R  + H + DD E+
Sbjct: 64  GPTFSVCESCVALKNAGGGRGNRVLSENRGQEEVNSFESEEDRIREDHGDGDDAES 119

[Close]

BLAST of CsGy1G011540 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 )

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-20
Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 0


Query: 13  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKN-MRFFGL-VLEDEEVM 72
           F+DFFP M  KLG +G I+E+  GF LLMDK+KGVIT ESLR+N     GL  L D++V 
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 73  WMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLS 105
           +M+ EGD D DGAL++ EF +LM +LSP  M  S
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEAS 112

[Close]

BLAST of CsGy1G011540 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-19
Identity = 53/94 (56.38%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 13  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKN-MRFFGL-VLEDEEVM 72
           F DF P M   LG +G I EL  GF LLMD+EKGVIT ESLR+N     GL  L DE+V 
Sbjct: 19  FHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDVR 78

Query: 73  WMVKEGDLDGDGALSEAEFFILMIKLSPGFMHLS 105
            M+KEGD D DGAL++ EF +LM +LSP  M  S
Sbjct: 79  CMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEAS 112

[Close]

BLAST of CsGy1G011540 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 89.0 bits (219), Expect = 6.3e-18
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 13  FKDFFPEMLEKLGAKGFIKELRYGFRLLMDKEKGVITAESLRKNMRFFGLV-LEDEEVMW 72
           ++D  P M EK+  + F+ EL  GF LL D E+ +ITAESLR+N    G+  +  E+   
Sbjct: 22  YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81

Query: 73  MVKEGDLDGDGALSEAEFFILMIKLSPGFMHLSSSFFHQS 112
           MV+EGDLDGDGAL++ EF +LM++LSP  M  + ++  ++
Sbjct: 82  MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKA 121

The following BLAST results are available for this feature:

BLAST of CsGy1G011540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSQ6	1.9e-19	55.32	Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1	[more]
O81831	2.8e-18	56.38	Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1	[more]
Q9ZPX9	8.9e-17	44.00	Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2	[more]
P43645	6.2e-10	37.36	Caltractin (Fragment) OS=Spermatozopsis similis OX=3192 PE=2 SV=1	[more]
Q06827	3.1e-09	36.26	Caltractin OS=Scherffelia dubia OX=3190 PE=1 SV=1	[more]

BLAST of CsGy1G011540 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652697.1	2.50e-195	100.00	hypothetical protein Csa_014317 [Cucumis sativus]	[more]
XP_008441923.1	3.78e-84	87.23	PREDICTED: B-box zinc finger protein 32-like [Cucumis melo] >KAA0056935.1 B-box ...	[more]
XP_038895968.1	1.98e-76	78.57	zinc finger protein CONSTANS-LIKE 9-like [Benincasa hispida]	[more]
KAF9683447.1	3.50e-66	47.90	hypothetical protein SADUNF_Sadunf04G0014600 [Salix dunnii]	[more]
KAA0056934.1	1.15e-65	88.89	calcium-binding protein PBP1 [Cucumis melo var. makuwa] >TYK26362.1 calcium-bind...	[more]

BLAST of CsGy1G011540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS80	5.79e-88	100.00	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071810 ...	[more]
A0A5A7UTR2	1.83e-84	87.23	B-box zinc finger protein 32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B4I3	1.83e-84	87.23	B-box zinc finger protein 32-like OS=Cucumis melo OX=3656 GN=LOC103485915 PE=4 S...	[more]
A0A0A0LV00	4.07e-75	97.48	EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071800 PE=...	[more]
A0A5A7UNY8	5.56e-66	88.89	Calcium-binding protein PBP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of CsGy1G011540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54470.1	5.4e-25	47.97	B-box type zinc finger family protein	[more]
AT4G27310.1	5.9e-24	48.28	B-box type zinc finger family protein	[more]
AT5G54490.1	1.4e-20	55.32	pinoid-binding protein 1	[more]
AT4G27280.1	2.0e-19	56.38	Calcium-binding EF-hand family protein	[more]
AT2G46600.1	6.3e-18	44.00	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 141..187 e-value: 1.5E-7 score: 41.1
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 142..185 e-value: 2.3E-5 score: 24.5
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 141..187 score: 9.186067
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 44..93 e-value: 8.1E-14 score: 51.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 64..99 score: 10.022245
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 32..89 e-value: 3.30218E-8 score: 47.1573
None	No IPR available	GENE3D	1.10.238.10		coord: 11..121 e-value: 1.3E-16 score: 62.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..264
None	No IPR available	PANTHER	PTHR47319:SF5	CALCIUM-BINDING PROTEIN PBP1-LIKE	coord: 8..112
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 145..187 e-value: 3.27162E-12 score: 57.6927
IPR044205	Calcium-binding protein KIC/PBP1/KRP1	PANTHER	PTHR47319	CALCIUM-BINDING PROTEIN KIC	coord: 8..112
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 77..89
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 7..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G011540.2	CsGy1G011540.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0008270	zinc ion binding