CsGy1G010490 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G010490
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionglycine-rich protein 5-like
LocationGy14Chr1: 6616756 .. 6617121 (-)
RNA-Seq ExpressionCsGy1G010490
SyntenyCsGy1G010490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCTTCGGCTTTCAAATATCTCTGGCTGGTGGTTCTGTGTGCACTAATTTGGGCCTCAGAGCCCAGAAAACTTGTAATTACAAATGGGGGAGAGATTGAGAGTGAAAAGACATTGCCTTTCCAGTTCTTTCCTGGATACGGAGGCGGGCTCGGCGGTGGCGGAGGGTTCGGTGGCGGCGGCGGCGGTGGGTTAGGTGGTGGTTCGGGCTTCGGCAGTGGAGGTGGAGGGGGTTTCGGATCTGGCATTGGAGGTCTAGGGAGTGGCGGTGGCGGAGGGTTTGGCGGCGGCGGTGGTGGTGGCATTTTAGGTGGTGGAGCTGGCGGAGGAGCAGGTGGTGGATTTGGAGGTGGACTGCCTTGA

mRNA sequence

ATGGGTTCTTCGGCTTTCAAATATCTCTGGCTGGTGGTTCTGTGTGCACTAATTTGGGCCTCAGAGCCCAGAAAACTTGTAATTACAAATGGGGGAGAGATTGAGAGTGAAAAGACATTGCCTTTCCAGTTCTTTCCTGGATACGGAGGCGGGCTCGGCGGTGGCGGAGGGTTCGGTGGCGGCGGCGGCGGTGGGTTAGGTGGTGGTTCGGGCTTCGGCAGTGGAGGTGGAGGGGGTTTCGGATCTGGCATTGGAGGTCTAGGGAGTGGCGGTGGCGGAGGGTTTGGCGGCGGCGGTGGTGGTGGCATTTTAGGTGGTGGAGCTGGCGGAGGAGCAGGTGGTGGATTTGGAGGTGGACTGCCTTGA

Coding sequence (CDS)

ATGGGTTCTTCGGCTTTCAAATATCTCTGGCTGGTGGTTCTGTGTGCACTAATTTGGGCCTCAGAGCCCAGAAAACTTGTAATTACAAATGGGGGAGAGATTGAGAGTGAAAAGACATTGCCTTTCCAGTTCTTTCCTGGATACGGAGGCGGGCTCGGCGGTGGCGGAGGGTTCGGTGGCGGCGGCGGCGGTGGGTTAGGTGGTGGTTCGGGCTTCGGCAGTGGAGGTGGAGGGGGTTTCGGATCTGGCATTGGAGGTCTAGGGAGTGGCGGTGGCGGAGGGTTTGGCGGCGGCGGTGGTGGTGGCATTTTAGGTGGTGGAGCTGGCGGAGGAGCAGGTGGTGGATTTGGAGGTGGACTGCCTTGA

Protein sequence

MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGLP*
Homology
[Close]
BLAST of CsGy1G010490 vs. NCBI nr
Match: XP_011648421.1 (glycine-rich cell wall structural protein [Cucumis sativus] >KGN64508.1 hypothetical protein Csa_013856 [Cucumis sativus])

HSP 1 Score: 173 bits (439), Expect = 2.28e-53
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG
Sbjct: 1   MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 120

[Close]
BLAST of CsGy1G010490 vs. NCBI nr
Match: XP_008446362.1 (PREDICTED: glycine-rich cell wall structural protein [Cucumis melo] >ADN34062.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0056845.1 glycine-rich cell wall structural protein [Cucumis melo var. makuwa] >TYJ99348.1 glycine-rich cell wall structural protein [Cucumis melo var. makuwa])

HSP 1 Score: 163 bits (413), Expect = 2.08e-49
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0 

Query: 1   MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGS AFKYLWLVVLCALI ASEPR+LVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG
Sbjct: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG GGGFGGGL
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120

[Close]
BLAST of CsGy1G010490 vs. NCBI nr
Match: XP_038895952.1 (glycine-rich cell wall structural protein-like [Benincasa hispida])

HSP 1 Score: 159 bits (401), Expect = 1.49e-47
Identity = 116/123 (94.31%), Postives = 119/123 (96.75%), Query Frame = 0 

Query: 1   MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGS AFK+LWLVVLCALIWASEPRKLVITNGGEIESEKTL FQFFPG+GGGLGGGGG+GG
Sbjct: 1   MGSLAFKFLWLVVLCALIWASEPRKLVITNGGEIESEKTLAFQFFPGFGGGLGGGGGYGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGG--ILGGGAGGGAGGGFGG 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGG  ILGGGAGGGAGGGFGG
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGGGILGGGAGGGAGGGFGG 120

[Close]
BLAST of CsGy1G010490 vs. NCBI nr
Match: XP_022140151.1 (glycine-rich protein 5-like [Momordica charantia])

HSP 1 Score: 129 bits (324), Expect = 8.46e-36
Identity = 105/121 (86.78%), Postives = 111/121 (91.74%), Query Frame = 0 

Query: 5   AFKYLWLVVLCALIWASEPRKLVITNGGEI----ESEKTLPFQFFPGYGGGLGGGGGFGG 64
           A K LWLV+L ALI ASEPRK+V  NGG+I    E+EKTLPFQFFPG+GGGLGGGGGFGG
Sbjct: 7   ASKVLWLVLLGALICASEPRKIV-RNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGFGG 66

Query: 65  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 121
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG+GGGFGGGL
Sbjct: 67  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGGGL 126

[Close]
BLAST of CsGy1G010490 vs. NCBI nr
Match: XP_022994117.1 (glycine-rich protein 5 [Cucurbita maxima])

HSP 1 Score: 116 bits (290), Expect = 1.13e-30
Identity = 103/124 (83.06%), Postives = 107/124 (86.29%), Query Frame = 0 

Query: 1   MGSS-AFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFG 60
           MGS  A K+LWL+VL ALI ASEPR+LV T GG   SEKT  FQFFPGYGGGLGGGGGFG
Sbjct: 1   MGSFLALKFLWLLVLFALICASEPRRLVGTGGG-FGSEKTGYFQFFPGYGGGLGGGGGFG 60

Query: 61  GGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGG--ILGGGAGGGAGGGFG 120
           GGGGGGLGGGSGFGSGGG GFGSGIGGLG GGGGGFGGGGG G  +LGGGAGGGAGGGFG
Sbjct: 61  GGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGGSGSGVLGGGAGGGAGGGFG 120

[Close]
BLAST of CsGy1G010490 vs. ExPASy TrEMBL
Match: A0A0A0LS00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062340 PE=4 SV=1)

HSP 1 Score: 173 bits (439), Expect = 1.10e-53
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG
Sbjct: 1   MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 120

[Close]
BLAST of CsGy1G010490 vs. ExPASy TrEMBL
Match: A0A5D3BMG3 (Glycine-rich cell wall structural protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005650 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 1.01e-49
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0 

Query: 1   MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGS AFKYLWLVVLCALI ASEPR+LVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG
Sbjct: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG GGGFGGGL
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120

[Close]
BLAST of CsGy1G010490 vs. ExPASy TrEMBL
Match: E5GC63 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 1.01e-49
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0 

Query: 1   MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGS AFKYLWLVVLCALI ASEPR+LVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG
Sbjct: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG GGGFGGGL
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120

[Close]
BLAST of CsGy1G010490 vs. ExPASy TrEMBL
Match: A0A1S3BEW4 (glycine-rich cell wall structural protein OS=Cucumis melo OX=3656 GN=LOC103489125 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 1.01e-49
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0 

Query: 1   MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGS AFKYLWLVVLCALI ASEPR+LVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG
Sbjct: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG GGGFGGGL
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120

[Close]
BLAST of CsGy1G010490 vs. ExPASy TrEMBL
Match: A0A6J1CF04 (glycine-rich protein 5-like OS=Momordica charantia OX=3673 GN=LOC111010881 PE=4 SV=1)

HSP 1 Score: 129 bits (324), Expect = 4.10e-36
Identity = 105/121 (86.78%), Postives = 111/121 (91.74%), Query Frame = 0 

Query: 5   AFKYLWLVVLCALIWASEPRKLVITNGGEI----ESEKTLPFQFFPGYGGGLGGGGGFGG 64
           A K LWLV+L ALI ASEPRK+V  NGG+I    E+EKTLPFQFFPG+GGGLGGGGGFGG
Sbjct: 7   ASKVLWLVLLGALICASEPRKIV-RNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGFGG 66

Query: 65  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 121
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG+GGGFGGGL
Sbjct: 67  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGGGL 126

The following BLAST results are available for this feature:
BLAST of CsGy1G010490 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G010490 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011648421.12.28e-53100.00glycine-rich cell wall structural protein [Cucumis sativus] >KGN64508.1 hypothet... [more]
XP_008446362.12.08e-4996.69PREDICTED: glycine-rich cell wall structural protein [Cucumis melo] >ADN34062.1 ... [more]
XP_038895952.11.49e-4794.31glycine-rich cell wall structural protein-like [Benincasa hispida][more]
XP_022140151.18.46e-3686.78glycine-rich protein 5-like [Momordica charantia][more]
XP_022994117.11.13e-3083.06glycine-rich protein 5 [Cucurbita maxima][more]
BLAST of CsGy1G010490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LS001.10e-53100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062340 PE=4 SV=1[more]
A0A5D3BMG31.01e-4996.69Glycine-rich cell wall structural protein OS=Cucumis melo var. makuwa OX=1194695... [more]
E5GC631.01e-4996.69Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A1S3BEW41.01e-4996.69glycine-rich cell wall structural protein OS=Cucumis melo OX=3656 GN=LOC10348912... [more]
A0A6J1CF044.10e-3686.78glycine-rich protein 5-like OS=Momordica charantia OX=3673 GN=LOC111010881 PE=4 ... [more]
BLAST of CsGy1G010490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G010490.2CsGy1G010490.2mRNA