CsGy1G010010 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G010010
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 6215590 .. 6215937 (+)
RNA-Seq ExpressionCsGy1G010010
SyntenyCsGy1G010010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAGAAGAGTGAGAGAGATAAGAAAGAAGAAGGCAAGGAAGAAAAGGAATCAATCGCTCAAGAGGCGCAAAGCGACCACCTAAGGAATCAGACAGTGTTAGAATTCCTAGATGAGGAGGTAAATAGGGAGAAAATAGGTGGAAGTCCTTTGGATTTCCGAATGAATGCGGCTAGCAGCAAAAAGAAGGTACGGCACCGCGACGCTCAATGCTATGCCTGCGCCAGACATCTGCTTCAAGTTCGGAGTGTCACGGCACCCAAGAGCAACGTCGTGACGCTTGGCCAATTATGCAAAGACAAAGGCATTTTGCCTTTTCGGCGTCGTGGCATCGAAGCTTCATAG

mRNA sequence

ATGAAAGAGAAGAGTGAGAGAGATAAGAAAGAAGAAGGCAAGGAAGAAAAGGAATCAATCGCTCAAGAGGCGCAAAGCGACCACCTAAGGAATCAGACAGTGTTAGAATTCCTAGATGAGGAGGTAAATAGGGAGAAAATAGGTGGAAGTCCTTTGGATTTCCGAATGAATGCGGCTAGCAGCAAAAAGAAGGTACGGCACCGCGACGCTCAATGCTATGCCTGCGCCAGACATCTGCTTCAAGTTCGGAGTGTCACGGCACCCAAGAGCAACGTCGTGACGCTTGGCCAATTATGCAAAGACAAAGGCATTTTGCCTTTTCGGCGTCGTGGCATCGAAGCTTCATAG

Coding sequence (CDS)

ATGAAAGAGAAGAGTGAGAGAGATAAGAAAGAAGAAGGCAAGGAAGAAAAGGAATCAATCGCTCAAGAGGCGCAAAGCGACCACCTAAGGAATCAGACAGTGTTAGAATTCCTAGATGAGGAGGTAAATAGGGAGAAAATAGGTGGAAGTCCTTTGGATTTCCGAATGAATGCGGCTAGCAGCAAAAAGAAGGTACGGCACCGCGACGCTCAATGCTATGCCTGCGCCAGACATCTGCTTCAAGTTCGGAGTGTCACGGCACCCAAGAGCAACGTCGTGACGCTTGGCCAATTATGCAAAGACAAAGGCATTTTGCCTTTTCGGCGTCGTGGCATCGAAGCTTCATAG

Protein sequence

MKEKSERDKKEEGKEEKESIAQEAQSDHLRNQTVLEFLDEEVNREKIGGSPLDFRMNAASSKKKVRHRDAQCYACARHLLQVRSVTAPKSNVVTLGQLCKDKGILPFRRRGIEAS*
Homology
[Close]
BLAST of CsGy1G010010 vs. NCBI nr
Match: KAE8652637.1 (hypothetical protein Csa_013487 [Cucumis sativus])

HSP 1 Score: 219 bits (559), Expect = 7.47e-72
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MKEKSERDKKEEGKEEKESIAQEAQSDHLRNQTVLEFLDEEVNREKIGGSPLDFRMNAAS 60
           MKEKSERDKKEEGKEEKESIAQEAQSDHLRNQTVLEFLDEEVNREKIGGSPLDFRMNAAS
Sbjct: 1   MKEKSERDKKEEGKEEKESIAQEAQSDHLRNQTVLEFLDEEVNREKIGGSPLDFRMNAAS 60

Query: 61  SKKKVRHRDAQCYACARHLLQVRSVTAPKSNVVTLGQLCKDKGILPFRRRGIEAS 115
           SKKKVRHRDAQCYACARHLLQVRSVTAPKSNVVTLGQLCKDKGILPFRRRGIEAS
Sbjct: 61  SKKKVRHRDAQCYACARHLLQVRSVTAPKSNVVTLGQLCKDKGILPFRRRGIEAS 115

[Close]
BLAST of CsGy1G010010 vs. ExPASy TrEMBL
Match: A0A0A0LUJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051890 PE=4 SV=1)

HSP 1 Score: 219 bits (559), Expect = 5.53e-72
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MKEKSERDKKEEGKEEKESIAQEAQSDHLRNQTVLEFLDEEVNREKIGGSPLDFRMNAAS 60
           MKEKSERDKKEEGKEEKESIAQEAQSDHLRNQTVLEFLDEEVNREKIGGSPLDFRMNAAS
Sbjct: 14  MKEKSERDKKEEGKEEKESIAQEAQSDHLRNQTVLEFLDEEVNREKIGGSPLDFRMNAAS 73

Query: 61  SKKKVRHRDAQCYACARHLLQVRSVTAPKSNVVTLGQLCKDKGILPFRRRGIEAS 115
           SKKKVRHRDAQCYACARHLLQVRSVTAPKSNVVTLGQLCKDKGILPFRRRGIEAS
Sbjct: 74  SKKKVRHRDAQCYACARHLLQVRSVTAPKSNVVTLGQLCKDKGILPFRRRGIEAS 128

The following BLAST results are available for this feature:
BLAST of CsGy1G010010 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G010010 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652637.17.47e-72100.00hypothetical protein Csa_013487 [Cucumis sativus][more]
BLAST of CsGy1G010010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUJ45.53e-72100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051890 PE=4 SV=1[more]
BLAST of CsGy1G010010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G010010.2CsGy1G010010.2mRNA