CsGy1G008220 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAATTCAATCCAAACATTTTTAAAACTCTGAAACCAACACTTTATCCGACTTTTGGTATTAAAAATTTGGCTTCTGATCTATGTGTTAATAATGAAAAATTGATTCCTCCTCTCTCCCATTTTTGCACTTTGTTCTTTGTTTGTTGCCGATGAAACCTTTCTTCTTTGGCATTTCAGAGTTTTCCTCTTGTTTTCTACTTCTGGGTTTTCTTCATTGAGCTGGGATTTTCACGCCATTGCGATCCTGTCCTTGTAAGAATCAACCCCTTCCCTTTTCCCTTTCTCTTTGGGGGAAAAGAACCATTTTTCATTCAAATATTAATATTTGGTCAAGTGGGTAGGACGTGGATCTTCAAACAACTCCTGTTTTAGACCATATCGAAAGGGATTAGATTTTGGGATGTCTGTCTAATATTATTTCCTTCTTGTTTGGTTTGATATCTGGTGAATGCTCCTATTTGGTTGAGTGGGGGAGAAGGAAAAGGCTTATTTCTTTATTTATTCTTGTCGGCGTTGTCCTTTTCTCCTTGTCTATAAGTTAAAAGAGGGGCTATTTGTTTAGAAATATTACTGTGGATGATGGATTATACCCTTTGAGTATGCCATCGCTTAGGCATTGGAGTCATCTATCAGACAACTTTAAATATTATCTTCTTCTGTATATGATGTTAAGGATTGAACTCTGATCCTCCTGTTTAATCTAGATCTTAATGAACAAGGAGATCTAGTTTCTTGTAAGGCCTTGTCATTAGATGGTTTATTTCAAAATTTGTATAGTTTGTGGAGTTGCTTAAAAAGTTGTAAGTTTGCTTTATTTGTTTCTGTGGATGCATTGGCAACTATAGTTGTATAATACAGCCCCTTGATTATCATGTTCTTTTGTTTATATTGTTAAAACTCTGTGGAAGTCTTGTTTCTATAGTTTGTCTATATAATTTGGTTTATTTGGTTGATGCAAAATTTTCTGCTTATTGTGGAGCATGTGGGTGAGATTATATGCTGTTATAGTTTTACTTGTCTGACAAGAGAAGTAATGCAATTGAGCAATTCTTGGCAGGCTTTCTCTTGAAATATTTGAGGTGTTGGAATTTGAAATGTCGTCTCCAAACAAGCGGAGAGATATGGATGTCATGAAATTGTAAGTTGATTGACAAGTGAGGTTTTCTCTTCGGTTTCTTATTGATTGCTGCTACAATCAGTTTTAGTTCTTGCATGTATGATATGTTCATACTATGAGATCAACTGCAGAAAATTAATGGAAAACTATGAGGAAGGTGCTGATACCTGATCTTGAGAAATTATAATGTAATCCAGGATTTTGGGGTATGCAGTTGAAGGACAAGAAGAATCAACTGGAAAAAATAATCTTGTTGAAGTGTAATGACTGTGAAACTTGAAAGTATGCGGTGTTGGAGCTAATGCTGAAGTTTTTCTTTTTCTAAATAACGTTGTTTTTTTGACAGTGATATTAAAATGCTGAAACTATTTTCCCTTGATGAATTGTAAGAGAAATTAAGGAATGATTTACTTGCTTAGGGCTGTCTGGCCTACCATTATGAAGTTAGACGATCCTAGGGAAGCTTAGTTTAGACATAATTTTGGAGTAGTAATCTACTTAATTTTCATTGTATTTCATCCATGATTAGAAAATCATGTAATTGATGTTTCGGATGACCATGATTGAATTGTTTTCGGACTTCGCCAGTTTATCTAATTAATAGGAGCTCTCCTATGCACTAAAGGTTTTCAATTCTCTTTACATAGATTCCCATTGTACTTTCTTAAGTTGAAGGTGTTGATTGTTGTTTCTTTGTTGAAATTTTCATATATTAAATCCAGGATGATGAGTGATTACAAAGTGGAGATGATCGACGATGGGCTTAGCGAATTTAATGTCGAATTCAACGGTCCAAAAGAAAGTATTCCCTATTCTAATTTGTCTGCTTCTATTACATGTATTTCTAGTTGCTTCAATGTGTAGGGCTGGTGCTGAGAAGTGTATTGCAGGTTTCCAAGTGATTTTTCATTTTCTTGAGAGCTTTAGTTTCTATGAATATGCATATGGATGAATAGCAGAGTTTTCCTCTTAACTAGCTGTTGAACTTCCAAGTGATGCTACCTTGTTAAGTTCTTTTGGCACCAATCGTTTCAACTCTTAATTTAGTCTCATTTAGAATGTTAAATTACGTGGGGTAACCCTTGAGCTTTAAATCGGATTCATAACATCAAAGTCTTAGAATATTTAACTTTTATGGTGAATTCTAGTGCTGATGTAGTTCTCATCTATTCGCTTCATATACATTACTCATGAGCAGTTTATCTGCTTGAACATTCTGATATACAAAATGGCTGCAACAATGACAGGTGTATACGAAGGTGGAGTTTGGAAAATCCACGTTGAACTTCCTGATGCTTATCCGTACAAGTCCCCATCTATTGGGTTTGTGAACAAGATATATCATCCAAATGTTGATGAACTGTGAGCAACCTAGACCTCACATAGTGTGCCTCTCAACTTGTTTAAGATTGTTATGTTTTCACTCTAGTGCACTACTATCTCTTATTTTTACAAGGTAGAAGTTTCTCAATGGTCTAAAATTTCCTTTCCACTTGCAGATCTGGTTCTGTCTGCCTGGATGTGATTAACCAAACTTGGAGTCCAATGTTTGGTAACTTTATATCAATTATCATTTTACTTCTTCAAGCTCAAAACCTGACATGAATGTTGACTGACAAGCTTTTTTTCTTTACTTTTTTGTTGCATATTTCTGTTTTCCAGACCTATTGAATGTTTTTGAAGTTTTCCTTCCACAGCTTTTGCTATATCCCAATCCTTCAGATCCCCTTAATGGCGACGCAGCATCTCTAATGTTAAAAGACAGAAGCCAATACGATCAGAAAGTCAAAGGTACGAGTTCATTCTGCAAATTCTCTACTATGGACTTGAGGTTTATGTGTTTTGCATAAAAGTATACTTTTATCTTTGTATTTAGATTTAGGTATCACATTTAGTAAGAATATTGCATAGCACAATGGAGATTTGCATTTGAAACTATTATTAATATGTTGAATATGTTATCTGAAACTCGAGTGATCAACAAGTTGGAATCCAAGGTGAAGTACTCTGTTCTTTTTGTTGTAGCTATAAGCTAACACGCCATTGGTAAACTACATAAATCTGCTTGTCGATTTTCTTGCTTGATTCGTTCTTCATAACATAATGGATAGGGTTTCAATTTGAGAAATGAGCATTTAGAATATTTACAAAACTGTGGAAACAAAAAAAACGTATGGATGTACAAGACAAGGGTGAGACCAAGTCCTCGAAAGTGCGAATTGAGTAAAGTTTTGATGAGATGTAAATGAAAGTACATATTGTTAGTGTGCTGTTTGGTATGACAGAGTACTGCGAACGCTATGCAAAAAGGGAAAACGTGACGAATTCAGGTGCAGAAGATGAGAGTGAAGAAGATGTAAGTGATGATGAAAGTGATTCAAGCGACAATGATATTGCTGGTCATGTTGATCTCTAAAGGCCTTACTAGATTCACACTCTCTCATTCAGACAAAAAAATGAAGAAACACATGAAATGATGTGTTCCATTACATGGTTTGTTTGGAATGAATGGATATTTCTGTTTGTTTTTGCCAACTTACAATTAGGCTGTAAAATAATGAATGGTTTTCATGTTTTGGGGGTAAGTGGAAGTACACTCCTATATGATGTTGAAATGTTAGTTTGTATCTTAAATTAATGCCACAAACTCTGTTCGCTACTTGGTGCTTTGAATCCTT CAAAAATTCAATCCAAACATTTTTAAAACTCTGAAACCAACACTTTATCCGACTTTTGGTATTAAAAATTTGGCTTCTGATCTATGTGTTAATAATGAAAAATTGATTCCTCCTCTCTCCCATTTTTGCACTTTGTTCTTTGTTTGTTGCCGATGAAACCTTTCTTCTTTGGCATTTCAGAGTTTTCCTCTTGTTTTCTACTTCTGGGTTTTCTTCATTGAGCTGGGATTTTCACGCCATTGCGATCCTGTCCTTGCTTTCTCTTGAAATATTTGAGGTGTTGGAATTTGAAATGTCGTCTCCAAACAAGCGGAGAGATATGGATGTCATGAAATTGATGATGAGTGATTACAAAGTGGAGATGATCGACGATGGGCTTAGCGAATTTAATGTCGAATTCAACGGTCCAAAAGAAAGTGTATACGAAGGTGGAGTTTGGAAAATCCACGTTGAACTTCCTGATGCTTATCCGTACAAGTCCCCATCTATTGGGTTTGTGAACAAGATATATCATCCAAATGTTGATGAACTATCTGGTTCTGTCTGCCTGGATGTGATTAACCAAACTTGGAGTCCAATGTTTGACCTATTGAATGTTTTTGAAGTTTTCCTTCCACAGCTTTTGCTATATCCCAATCCTTCAGATCCCCTTAATGGCGACGCAGCATCTCTAATGTTAAAAGACAGAAGCCAATACGATCAGAAAGTCAAAGAGTACTGCGAACGCTATGCAAAAAGGGAAAACGTGACGAATTCAGGTGCAGAAGATGAGAGTGAAGAAGATGTAAGTGATGATGAAAGTGATTCAAGCGACAATGATATTGCTGGTCATGTTGATCTCTAAAGGCCTTACTAGATTCACACTCTCTCATTCAGACAAAAAAATGAAGAAACACATGAAATGATGTGTTCCATTACATGGTTTGTTTGGAATGAATGGATATTTCTGTTTGTTTTTGCCAACTTACAATTAGGCTGTAAAATAATGAATGGTTTTCATGTTTTGGGGGTAAGTGGAAGTACACTCCTATATGATGTTGAAATGTTAGTTTGTATCTTAAATTAATGCCACAAACTCTGTTCGCTACTTGGTGCTTTGAATCCTT ATGTCGTCTCCAAACAAGCGGAGAGATATGGATGTCATGAAATTGATGATGAGTGATTACAAAGTGGAGATGATCGACGATGGGCTTAGCGAATTTAATGTCGAATTCAACGGTCCAAAAGAAAGTGTATACGAAGGTGGAGTTTGGAAAATCCACGTTGAACTTCCTGATGCTTATCCGTACAAGTCCCCATCTATTGGGTTTGTGAACAAGATATATCATCCAAATGTTGATGAACTATCTGGTTCTGTCTGCCTGGATGTGATTAACCAAACTTGGAGTCCAATGTTTGACCTATTGAATGTTTTTGAAGTTTTCCTTCCACAGCTTTTGCTATATCCCAATCCTTCAGATCCCCTTAATGGCGACGCAGCATCTCTAATGTTAAAAGACAGAAGCCAATACGATCAGAAAGTCAAAGAGTACTGCGAACGCTATGCAAAAAGGGAAAACGTGACGAATTCAGGTGCAGAAGATGAGAGTGAAGAAGATGTAAGTGATGATGAAAGTGATTCAAGCGACAATGATATTGCTGGTCATGTTGATCTCTAA MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESVYEGGVWKIHVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDRSQYDQKVKEYCERYAKRENVTNSGAEDESEEDVSDDESDSSDNDIAGHVDL* Homology
BLAST of CsGy1G008220 vs. ExPASy Swiss-Prot
Match: P16577 (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.1e-74 Identity = 134/183 (73.22%), Postives = 162/183 (88.52%), Query Frame = 0
BLAST of CsGy1G008220 vs. ExPASy Swiss-Prot
Match: P42749 (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2) HSP 1 Score: 275.0 bits (702), Expect = 6.1e-73 Identity = 134/184 (72.83%), Postives = 160/184 (86.96%), Query Frame = 0
BLAST of CsGy1G008220 vs. ExPASy Swiss-Prot
Match: P42748 (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2) HSP 1 Score: 274.6 bits (701), Expect = 8.0e-73 Identity = 132/180 (73.33%), Postives = 155/180 (86.11%), Query Frame = 0
BLAST of CsGy1G008220 vs. ExPASy Swiss-Prot
Match: P42750 (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 SV=2) HSP 1 Score: 259.6 bits (662), Expect = 2.7e-68 Identity = 122/182 (67.03%), Postives = 151/182 (82.97%), Query Frame = 0
BLAST of CsGy1G008220 vs. ExPASy Swiss-Prot
Match: Q9P7R4 (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc8 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.9e-58 Identity = 108/182 (59.34%), Postives = 143/182 (78.57%), Query Frame = 0
BLAST of CsGy1G008220 vs. NCBI nr
Match: XP_004152466.1 (ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >XP_008438150.1 PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Cucumis melo] >XP_008438158.1 PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Cucumis melo] >XP_011651462.1 ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >XP_031743574.1 ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >XP_031743578.1 ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >KGN64301.2 hypothetical protein Csa_013725 [Cucumis sativus]) HSP 1 Score: 367 bits (941), Expect = 6.79e-128 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of CsGy1G008220 vs. NCBI nr
Match: XP_038895241.1 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 [Benincasa hispida]) HSP 1 Score: 361 bits (926), Expect = 1.32e-125 Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of CsGy1G008220 vs. NCBI nr
Match: XP_022954942.1 (ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita moschata] >XP_022954943.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita moschata] >XP_022954944.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita moschata] >XP_022994669.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima] >XP_022994670.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima] >XP_022994671.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima] >XP_022994672.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima] >XP_023541208.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita pepo subsp. pepo] >XP_023541209.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita pepo subsp. pepo] >XP_023541210.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 347 bits (891), Expect = 3.07e-120 Identity = 173/185 (93.51%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of CsGy1G008220 vs. NCBI nr
Match: XP_038895240.1 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 [Benincasa hispida]) HSP 1 Score: 348 bits (892), Expect = 4.53e-120 Identity = 180/206 (87.38%), Postives = 181/206 (87.86%), Query Frame = 0
BLAST of CsGy1G008220 vs. NCBI nr
Match: XP_011651465.1 (ubiquitin-conjugating enzyme E2-23 kDa isoform X2 [Cucumis sativus]) HSP 1 Score: 346 bits (888), Expect = 6.41e-120 Identity = 176/183 (96.17%), Postives = 176/183 (96.17%), Query Frame = 0
BLAST of CsGy1G008220 vs. ExPASy TrEMBL
Match: A0A1S3AVD3 (ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucumis melo OX=3656 GN=LOC103483342 PE=3 SV=1) HSP 1 Score: 367 bits (941), Expect = 3.29e-128 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of CsGy1G008220 vs. ExPASy TrEMBL
Match: A0A6J1JWI6 (ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111490313 PE=3 SV=1) HSP 1 Score: 347 bits (891), Expect = 1.49e-120 Identity = 173/185 (93.51%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of CsGy1G008220 vs. ExPASy TrEMBL
Match: A0A6J1GUH1 (ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111457050 PE=3 SV=1) HSP 1 Score: 347 bits (891), Expect = 1.49e-120 Identity = 173/185 (93.51%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of CsGy1G008220 vs. ExPASy TrEMBL
Match: A0A6J1C614 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008728 PE=3 SV=1) HSP 1 Score: 344 bits (883), Expect = 2.46e-119 Identity = 176/185 (95.14%), Postives = 179/185 (96.76%), Query Frame = 0
BLAST of CsGy1G008220 vs. ExPASy TrEMBL
Match: A0A0A0LQU9 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045930 PE=3 SV=1) HSP 1 Score: 334 bits (857), Expect = 2.36e-114 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of CsGy1G008220 vs. TAIR 10
Match: AT1G63800.1 (ubiquitin-conjugating enzyme 5 ) HSP 1 Score: 275.0 bits (702), Expect = 4.3e-74 Identity = 134/184 (72.83%), Postives = 160/184 (86.96%), Query Frame = 0
BLAST of CsGy1G008220 vs. TAIR 10
Match: AT5G41340.1 (ubiquitin conjugating enzyme 4 ) HSP 1 Score: 274.6 bits (701), Expect = 5.7e-74 Identity = 132/180 (73.33%), Postives = 155/180 (86.11%), Query Frame = 0
BLAST of CsGy1G008220 vs. TAIR 10
Match: AT2G46030.1 (ubiquitin-conjugating enzyme 6 ) HSP 1 Score: 259.6 bits (662), Expect = 1.9e-69 Identity = 122/182 (67.03%), Postives = 151/182 (82.97%), Query Frame = 0
BLAST of CsGy1G008220 vs. TAIR 10
Match: AT1G78870.2 (ubiquitin-conjugating enzyme 35 ) HSP 1 Score: 99.4 bits (246), Expect = 3.3e-21 Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = 0
BLAST of CsGy1G008220 vs. TAIR 10
Match: AT1G16890.2 (ubiquitin-conjugating enzyme 36 ) HSP 1 Score: 98.6 bits (244), Expect = 5.6e-21 Identity = 47/122 (38.52%), Postives = 73/122 (59.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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