CsGy1G008217 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G008217
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 5205373 .. 5206509 (+)
RNA-Seq ExpressionCsGy1G008217
SyntenyCsGy1G008217
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCAATATGGGGTAGGACCCTGCTTCTCTCCTAATCTTCTCCGCTTTCTCATTAATGTTAAGCTTCCACCTGGTTACAAATCATTGGGGGTGGAAAGTGCAAATCTTCTTCTCCACATGTTCTCATCTGCCAGTCCTTCGAGCGGTTCTATATGTTTCTCTAATTACTTTCAGCATTGAATGGAATTTGTCTATGAATTCCAGTCTTCAGATGTATTTGTGCAGATGAAAGAAATATGGTACATGTGCATTGTATAATTAGAAAGTCCTTTATGACTGAACTATAATTTAAATATTCTTGATCAATAAATCTATGTTCTTGCCTACAATATTATAATTGGAATTGTTTTAGTTCCATCCCTTATGAATCTACTAGATGCCATAATGTTAATTTATCTGTATTGATGTGGTTTACTGATTCTGGTGACAAGGAAATTTAGTATGTAAATGAATACTGATGAGAATGATGACTTTTATTAATTTTGCAATGTTATCTTCAAAAGTTTGCCTTATGCATCAGCCTTCAGCTTTTTGTATATTATGGAGTCAGAGATGTTGATTTTGCTCATCTTTCAACTTTGACTGATCAATTTGATGCAGAATTAGCTTCTCTTCAAAACGAAATTACTCTTTAAACTCAAATATAAGGTGAAGTTATTTGAAGTTCGTTCAACCATTATCGATAAATTCAGAAGCAATCTTCTTGCTGAAGTAATGTAAGTCTCTTCCTGCTTCCTTCATGATGATAACAAGACCAATACATATAGAAAGATCCTTAAATTTCTTTATTCTGAAGTTCGTTGTTCTTGTTTGTTTGTCCTTTGTTTTCTTTGTTTTCTTTTACGTTTCTATTGGACGCTTGTATCTTTGAACAATTTTCTTTTCATGTGTCAGTTAAAGCTGGATCTTGTTCTTAGAACTCAGGGACATAGTGATATCCAGTTTGTAAAAGTTCTTTTTTGTTATGTTTTTTAATTGATTCACTCATCTATTATTTTACATTCTTTCATGTGTTAACCAAATGTTTATACAGAACAGAATTCCACTTCCCTTCTCTTCAAGGAATTGGATAAGCCACAGCATGTGGGTGACGTTAGTAGTCATTGGAGAGCAAATAATCAGCACGTGAGCTGA

mRNA sequence

ATGTCTCAATATGGGGTAGGACCCTGCTTCTCTCCTAATCTTCTCCGCTTTCTCATTAATGTTAAGCTTCCACCTGGTTACAAATCATTGGGGGTGGAAAGTGCAAATCTTCTTCTCCACATGTTCTCATCTGCCAGTCCTTCGAGCGAACAGAATTCCACTTCCCTTCTCTTCAAGGAATTGGATAAGCCACAGCATGTGGGTGACGTTAGTAGTCATTGGAGAGCAAATAATCAGCACGTGAGCTGA

Coding sequence (CDS)

ATGTCTCAATATGGGGTAGGACCCTGCTTCTCTCCTAATCTTCTCCGCTTTCTCATTAATGTTAAGCTTCCACCTGGTTACAAATCATTGGGGGTGGAAAGTGCAAATCTTCTTCTCCACATGTTCTCATCTGCCAGTCCTTCGAGCGAACAGAATTCCACTTCCCTTCTCTTCAAGGAATTGGATAAGCCACAGCATGTGGGTGACGTTAGTAGTCATTGGAGAGCAAATAATCAGCACGTGAGCTGA

Protein sequence

MSQYGVGPCFSPNLLRFLINVKLPPGYKSLGVESANLLLHMFSSASPSSEQNSTSLLFKELDKPQHVGDVSSHWRANNQHVS*
Homology
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BLAST of CsGy1G008217 vs. NCBI nr
Match: KGN64300.2 (hypothetical protein Csa_014016 [Cucumis sativus])

HSP 1 Score: 171 bits (433), Expect = 1.13e-53
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MSQYGVGPCFSPNLLRFLINVKLPPGYKSLGVESANLLLHMFSSASPSSEQNSTSLLFKE 60
          MSQYGVGPCFSPNLLRFLINVKLPPGYKSLGVESANLLLHMFSSASPSSEQNSTSLLFKE
Sbjct: 1  MSQYGVGPCFSPNLLRFLINVKLPPGYKSLGVESANLLLHMFSSASPSSEQNSTSLLFKE 60

Query: 61 LDKPQHVGDVSSHWRANNQHVS 82
          LDKPQHVGDVSSHWRANNQHVS
Sbjct: 61 LDKPQHVGDVSSHWRANNQHVS 82

The following BLAST results are available for this feature:
BLAST of CsGy1G008217 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G008217 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64300.21.13e-53100.00hypothetical protein Csa_014016 [Cucumis sativus][more]
BLAST of CsGy1G008217 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy1G008217 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G008217.1CsGy1G008217.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006596 polyamine biosynthetic process
molecular_function GO:0004766 spermidine synthase activity