CsGy1G007660 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G007660
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RPA-interacting protein
Location	Gy14Chr1: 4908746 .. 4910815 (+)
RNA-Seq Expression	CsGy1G007660
Synteny	CsGy1G007660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGATAGTCCAAATCCCGTCATCCAAACCCGCCGTTCTTCAATTAAGACCCATCCTCGTTACAACAATCAACAATCATGGAAGCAGAAGGTGAATTTTCTCTTTGCTCGATGCCTTGTTCTGTGTTTTTTTGGCGGGTTTTTGTTTAATTCGAAAATTAAAGTCTACTATTGATAGCTGAGGGAAAACTGTTGCAAGAGAGTTAGAGAAGGAAGAAGCCGCTTGCTCTGGAAAATGAGGTTGCCCATGTCCTCGCCCACTTATTCCCATTCTCTCAACAATCGACAGCAGGTCAATTTTTATAATTTTTTGTTTTTTCATTGCAATTAATTGATGGGTGTTGCATAATTTGTGCTCCAAATACTTCAATCCTTCTTTTGTAATGTAGTTTGTGTCTGTTCTTTTTGGGTATTTTGTTGGTTGTAGGATTTGATCAAATCTGCTTTTCAAGACATCTTTGCTGATGAGCTGAAAAAGATTAAAGATGAATCTGTGAATGACTATAATGAGAATTTACCTTCTGTCCCTGAGGCTGCTGATGTTCTTTGGGAATATGAGGGGATTCATGATGCCTATGAAGGTGATGGTGAAGAAATACTGTTGGAAATGCAAAGGATCTTTTATGAGGATCTGAATGTTGATCTGAGACAAAAAGGTGAACTTTCCGATGCTGTTTTATTTTCTGAAGTTCATTATCTCAAAGTTTGTATATTCTGTGGCTTTCTTCCAAGGACTAAATGGTTTGTCATTCTCCGGGGAAACTGTGTTTTATGGTAGTCATTAATTTGGATTGATTTTCATTAGTTAAGTGCATGCAGCAATAGTCAATGTCAAGTAATAATAATAATTGAACTTGTGTATTGTTTCATCTGTTCTTTTAATTTTATTGATGTTACTGCAGGTTCTGTTGTAGTATATGGTGATCGATCTTCTCTGTTATTATTTTAGCTTTTAAAAACCCTATTTTGAGTAGGATGTTTACTCAGTTTTTTGCAGAATCTGAAGACCCTATTGTGACATGGGAAGATGAAGAAGATGAGTTCTTAGCCCGTGCAGTTTATGAACATATGCAACTTAGTAATGAGAAGGTTAGTTTTCATCCTTACTTTTGAGGGTTGTGAACACTTGTCCATGCAAATTACAAAATCTTATGCCTCCTACAAGAGTAATTAACTTGAAATTTTGTATACTTTCGGCGTTTTTTTTAATCATATCTTACATTTACATTGGTTAGGCATGATTTATTCTTAGTGTAATCGTAAGCTTACATGTCCTGTTTAAAATTTCACGTTAGATTCTTGAGAAGTTCTGGTGCCCTATATGTAAACAAGGAGAGCTGCAAGAGAACAACCACTTCATACATTGCACTCATTGTGGACTTCGGCTTAACAAAGGCAATGAGGTTTTCCACTTGATCTTAAGACCTCTGAGTTGATCATCCTCTTCTTAATCACATCTTTTACTCCAAGGTCCATATTAAGTTATTAGGCAGTTGCTATTACTTGAGTGAGTGTCAATCAATGGTTGTTGTCTTCTTAACATGTCAGATTATTCTTGCAGCTAATATGTTACTTCCTGAATGAATTACGAAGACCACTCTCAACTTAGACTGGAAGTTGGCGCCTATGTTTATTGTCATTTGGTCATGGGACAGATGTTATATGAACTTTCCAACCCTCCCCCCCAATAATAAAATAAAATAAAAAGAGAAAAGAGAAAAACTAATGAAAATAAATCTTTGGAAGGTAAATTTGATTATCTTGTGCTGCGCTGTGGTGTCCTACTGGCCATGTCTGGCATAGAATAACTGTGTGCAATAATATCAGTATGTGATATTGAAGTCGTAATTTGTCGAAATGTTAACTTTGCAATTTTTTTATTATTTGTCATATGACCTTTCAGGTTACTCTGGACCTCCTCCGTTGCCGGTTGGCAGATGTGCATGCTGAACATCTCGATCGGGGCTGTAGATTGAAGCCTAAGTTTTGTGTTGAGAGTAGATTTAACATTACTGCATTGTACATCTCTTGTGAAGGTTGCAACACATTTGAGGTTGTAATATAG

mRNA sequence

ATGGAAGAAGATAGTCCAAATCCCGTCATCCAAACCCGCCGTTCTTCAATTAAGACCCATCCTCGTTACAACAATCAACAATCATGGAAGCAGAAGCTGAGGGAAAACTGTTGCAAGAGAGTTAGAGAAGGAAGAAGCCGCTTGCTCTGGAAAATGAGGTTGCCCATGTCCTCGCCCACTTATTCCCATTCTCTCAACAATCGACAGCAGGATTTGATCAAATCTGCTTTTCAAGACATCTTTGCTGATGAGCTGAAAAAGATTAAAGATGAATCTGTGAATGACTATAATGAGAATTTACCTTCTGTCCCTGAGGCTGCTGATGTTCTTTGGGAATATGAGGGGATTCATGATGCCTATGAAGGTGATGGTGAAGAAATACTGTTGGAAATGCAAAGGATCTTTTATGAGGATCTGAATGTTGATCTGAGACAAAAAGAATCTGAAGACCCTATTGTGACATGGGAAGATGAAGAAGATGAGTTCTTAGCCCGTGCAGTTTATGAACATATGCAACTTAGTAATGAGAAGATTCTTGAGAAGTTCTGGTGCCCTATATGTAAACAAGGAGAGCTGCAAGAGAACAACCACTTCATACATTGCACTCATTGTGGACTTCGGCTTAACAAAGGCAATGAGGTTACTCTGGACCTCCTCCGTTGCCGGTTGGCAGATGTGCATGCTGAACATCTCGATCGGGGCTGTAGATTGAAGCCTAAGTTTTGTGTTGAGAGTAGATTTAACATTACTGCATTGTACATCTCTTGTGAAGGTTGCAACACATTTGAGGTTGTAATATAG

Coding sequence (CDS)

ATGGAAGAAGATAGTCCAAATCCCGTCATCCAAACCCGCCGTTCTTCAATTAAGACCCATCCTCGTTACAACAATCAACAATCATGGAAGCAGAAGCTGAGGGAAAACTGTTGCAAGAGAGTTAGAGAAGGAAGAAGCCGCTTGCTCTGGAAAATGAGGTTGCCCATGTCCTCGCCCACTTATTCCCATTCTCTCAACAATCGACAGCAGGATTTGATCAAATCTGCTTTTCAAGACATCTTTGCTGATGAGCTGAAAAAGATTAAAGATGAATCTGTGAATGACTATAATGAGAATTTACCTTCTGTCCCTGAGGCTGCTGATGTTCTTTGGGAATATGAGGGGATTCATGATGCCTATGAAGGTGATGGTGAAGAAATACTGTTGGAAATGCAAAGGATCTTTTATGAGGATCTGAATGTTGATCTGAGACAAAAAGAATCTGAAGACCCTATTGTGACATGGGAAGATGAAGAAGATGAGTTCTTAGCCCGTGCAGTTTATGAACATATGCAACTTAGTAATGAGAAGATTCTTGAGAAGTTCTGGTGCCCTATATGTAAACAAGGAGAGCTGCAAGAGAACAACCACTTCATACATTGCACTCATTGTGGACTTCGGCTTAACAAAGGCAATGAGGTTACTCTGGACCTCCTCCGTTGCCGGTTGGCAGATGTGCATGCTGAACATCTCGATCGGGGCTGTAGATTGAAGCCTAAGTTTTGTGTTGAGAGTAGATTTAACATTACTGCATTGTACATCTCTTGTGAAGGTTGCAACACATTTGAGGTTGTAATATAG

Protein sequence

MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPTYSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAYEGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILEKFWCPICKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPKFCVESRFNITALYISCEGCNTFEVVI*

Homology

[Close]

BLAST of CsGy1G007660 vs. NCBI nr
Match: XP_011651131.1 (uncharacterized protein LOC101216926 isoform X1 [Cucumis sativus] >KGN64242.1 hypothetical protein Csa_013956 [Cucumis sativus])

HSP 1 Score: 545 bits (1404), Expect = 1.02e-195
Identity = 265/266 (99.62%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60
           MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT
Sbjct: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60

Query: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120
           YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY
Sbjct: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120

Query: 121 EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180
           EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILE
Sbjct: 121 EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180

Query: 181 KFWCPICKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240
           KFWCP+CKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK
Sbjct: 181 KFWCPMCKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240

Query: 241 FCVESRFNITALYISCEGCNTFEVVI 266
           FCVESRFNITALYISCEGCNTFEVVI
Sbjct: 241 FCVESRFNITALYISCEGCNTFEVVI 266

[Close]

BLAST of CsGy1G007660 vs. NCBI nr
Match: XP_031737332.1 (uncharacterized protein LOC101216926 isoform X2 [Cucumis sativus])

HSP 1 Score: 535 bits (1377), Expect = 1.19e-191
Identity = 262/266 (98.50%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60
           MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT
Sbjct: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60

Query: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120
           YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY
Sbjct: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120

Query: 121 EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180
           EGDGEEILLEMQRIFYEDLNVDLRQK   DPIVTWEDEEDEFLARAVYEHMQLSNEKILE
Sbjct: 121 EGDGEEILLEMQRIFYEDLNVDLRQK---DPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180

Query: 181 KFWCPICKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240
           KFWCP+CKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK
Sbjct: 181 KFWCPMCKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240

Query: 241 FCVESRFNITALYISCEGCNTFEVVI 266
           FCVESRFNITALYISCEGCNTFEVVI
Sbjct: 241 FCVESRFNITALYISCEGCNTFEVVI 263

[Close]

BLAST of CsGy1G007660 vs. NCBI nr
Match: XP_008437393.1 (PREDICTED: uncharacterized protein LOC103482820 [Cucumis melo])

HSP 1 Score: 528 bits (1360), Expect = 5.21e-189
Identity = 255/266 (95.86%), Postives = 262/266 (98.50%), Query Frame = 0


Query: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60
           ME+D+PNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT
Sbjct: 1   MEDDNPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60

Query: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120
           Y HSLNNRQQD IKSAFQDIF+DELKKIKDESVND+NENLPSVPEAADVLWEYEGIHDAY
Sbjct: 61  YPHSLNNRQQDFIKSAFQDIFSDELKKIKDESVNDFNENLPSVPEAADVLWEYEGIHDAY 120

Query: 121 EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180
           EGDGEEILLEMQRIFYEDLNVD+RQKESE PIVTWEDEEDEFLARAVYEHMQLSNEKILE
Sbjct: 121 EGDGEEILLEMQRIFYEDLNVDMRQKESEGPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180

Query: 181 KFWCPICKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240
           KFWCP+CKQGELQEN+HFIHCT CGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK
Sbjct: 181 KFWCPMCKQGELQENSHFIHCTQCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240

Query: 241 FCVESRFNITALYISCEGCNTFEVVI 266
           FCVESRFNITALYISCEGCNTFEVVI
Sbjct: 241 FCVESRFNITALYISCEGCNTFEVVI 266

[Close]

BLAST of CsGy1G007660 vs. NCBI nr
Match: XP_038893884.1 (uncharacterized protein LOC120082685 isoform X1 [Benincasa hispida])

HSP 1 Score: 508 bits (1308), Expect = 4.41e-181
Identity = 242/266 (90.98%), Postives = 256/266 (96.24%), Query Frame = 0


Query: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60
           ME+D PN VIQT RSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPM+SP+
Sbjct: 1   MEDDDPNSVIQTHRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMTSPS 60

Query: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120
           Y HSLNNRQQD IKSAFQDIF+DELKKIKD+SVNDYN+NLPSVPEAADVLWEYEG+ DAY
Sbjct: 61  YPHSLNNRQQDFIKSAFQDIFSDELKKIKDQSVNDYNKNLPSVPEAADVLWEYEGVQDAY 120

Query: 121 EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180
           EG+GEEILLEMQRIFYEDLN+DLR KESE PIVTWEDEEDEFLARAVYEHM+L++EK+LE
Sbjct: 121 EGEGEEILLEMQRIFYEDLNIDLRYKESEGPIVTWEDEEDEFLARAVYEHMELNSEKVLE 180

Query: 181 KFWCPICKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240
           KFWCPICKQGELQENNHFIHCTHCGLRL KGNEVTLDLLRCRLADVHAEHLDRGCRLKP 
Sbjct: 181 KFWCPICKQGELQENNHFIHCTHCGLRLTKGNEVTLDLLRCRLADVHAEHLDRGCRLKPN 240

Query: 241 FCVESRFNITALYISCEGCNTFEVVI 266
           FCVES+FNITALYISCEGCNTFEVVI
Sbjct: 241 FCVESKFNITALYISCEGCNTFEVVI 266

[Close]

BLAST of CsGy1G007660 vs. NCBI nr
Match: TYJ99094.1 (uncharacterized protein E5676_scaffold248G002980 [Cucumis melo var. makuwa])

HSP 1 Score: 504 bits (1297), Expect = 6.42e-177
Identity = 253/308 (82.14%), Postives = 260/308 (84.42%), Query Frame = 0


Query: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60
           ME+D+PNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT
Sbjct: 1   MEDDNPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60

Query: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120
           Y HSLNNRQQD IKSAFQDIF+DELKKIKDESVND+NENLPSVPEAADVLWEYEGIHDAY
Sbjct: 61  YPHSLNNRQQDFIKSAFQDIFSDELKKIKDESVNDFNENLPSVPEAADVLWEYEGIHDAY 120

Query: 121 EGDGEEILLEMQRIFYEDLNVDLRQK---------------------------------- 180
           EGDGEEILLEMQRIFYEDLNVD+RQK                                  
Sbjct: 121 EGDGEEILLEMQRIFYEDLNVDMRQKGDFADAVYFLKFIISKFVYSVAVFQGLNAFKNAI 180

Query: 181 ----------ESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILEKFWCPICKQGELQENN 240
                     ESE PIVTWEDEEDEFLARAVYEHMQLSNEKILEKFWCP+CKQGELQEN+
Sbjct: 181 LSRMFTQFFAESEGPIVTWEDEEDEFLARAVYEHMQLSNEKILEKFWCPMCKQGELQENS 240

Query: 241 HFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPKFCVESRFNITALYISC 264
           HFIHCT CGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPKFCVESRFNITALYISC
Sbjct: 241 HFIHCTQCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPKFCVESRFNITALYISC 300

[Close]

BLAST of CsGy1G007660 vs. ExPASy TrEMBL
Match: A0A0A0LTY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G044910 PE=4 SV=1)

HSP 1 Score: 545 bits (1404), Expect = 4.93e-196
Identity = 265/266 (99.62%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60
           MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT
Sbjct: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60

Query: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120
           YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY
Sbjct: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120

Query: 121 EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180
           EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILE
Sbjct: 121 EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180

Query: 181 KFWCPICKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240
           KFWCP+CKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK
Sbjct: 181 KFWCPMCKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240

Query: 241 FCVESRFNITALYISCEGCNTFEVVI 266
           FCVESRFNITALYISCEGCNTFEVVI
Sbjct: 241 FCVESRFNITALYISCEGCNTFEVVI 266

[Close]

BLAST of CsGy1G007660 vs. ExPASy TrEMBL
Match: A0A1S3AU18 (uncharacterized protein LOC103482820 OS=Cucumis melo OX=3656 GN=LOC103482820 PE=4 SV=1)

HSP 1 Score: 528 bits (1360), Expect = 2.52e-189
Identity = 255/266 (95.86%), Postives = 262/266 (98.50%), Query Frame = 0


Query: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60
           ME+D+PNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT
Sbjct: 1   MEDDNPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60

Query: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120
           Y HSLNNRQQD IKSAFQDIF+DELKKIKDESVND+NENLPSVPEAADVLWEYEGIHDAY
Sbjct: 61  YPHSLNNRQQDFIKSAFQDIFSDELKKIKDESVNDFNENLPSVPEAADVLWEYEGIHDAY 120

Query: 121 EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180
           EGDGEEILLEMQRIFYEDLNVD+RQKESE PIVTWEDEEDEFLARAVYEHMQLSNEKILE
Sbjct: 121 EGDGEEILLEMQRIFYEDLNVDMRQKESEGPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180

Query: 181 KFWCPICKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240
           KFWCP+CKQGELQEN+HFIHCT CGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK
Sbjct: 181 KFWCPMCKQGELQENSHFIHCTQCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240

Query: 241 FCVESRFNITALYISCEGCNTFEVVI 266
           FCVESRFNITALYISCEGCNTFEVVI
Sbjct: 241 FCVESRFNITALYISCEGCNTFEVVI 266

[Close]

BLAST of CsGy1G007660 vs. ExPASy TrEMBL
Match: A0A5D3BJ40 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002980 PE=4 SV=1)

HSP 1 Score: 504 bits (1297), Expect = 3.11e-177
Identity = 253/308 (82.14%), Postives = 260/308 (84.42%), Query Frame = 0


Query: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60
           ME+D+PNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT
Sbjct: 1   MEDDNPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60

Query: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120
           Y HSLNNRQQD IKSAFQDIF+DELKKIKDESVND+NENLPSVPEAADVLWEYEGIHDAY
Sbjct: 61  YPHSLNNRQQDFIKSAFQDIFSDELKKIKDESVNDFNENLPSVPEAADVLWEYEGIHDAY 120

Query: 121 EGDGEEILLEMQRIFYEDLNVDLRQK---------------------------------- 180
           EGDGEEILLEMQRIFYEDLNVD+RQK                                  
Sbjct: 121 EGDGEEILLEMQRIFYEDLNVDMRQKGDFADAVYFLKFIISKFVYSVAVFQGLNAFKNAI 180

Query: 181 ----------ESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILEKFWCPICKQGELQENN 240
                     ESE PIVTWEDEEDEFLARAVYEHMQLSNEKILEKFWCP+CKQGELQEN+
Sbjct: 181 LSRMFTQFFAESEGPIVTWEDEEDEFLARAVYEHMQLSNEKILEKFWCPMCKQGELQENS 240

Query: 241 HFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPKFCVESRFNITALYISC 264
           HFIHCT CGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPKFCVESRFNITALYISC
Sbjct: 241 HFIHCTQCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPKFCVESRFNITALYISC 300

[Close]

BLAST of CsGy1G007660 vs. ExPASy TrEMBL
Match: A0A6J1C935 (uncharacterized protein LOC111008573 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008573 PE=4 SV=1)

HSP 1 Score: 459 bits (1181), Expect = 1.03e-161
Identity = 220/266 (82.71%), Postives = 240/266 (90.23%), Query Frame = 0


Query: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60
           MEE+ PN   Q RR S+KTHPRYNN QSWKQKLRENC KRVREGRSRLLWKMRLP+SSPT
Sbjct: 22  MEEEDPNSTTQIRRPSLKTHPRYNNYQSWKQKLRENCYKRVREGRSRLLWKMRLPVSSPT 81

Query: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120
           Y HSLNNRQQD +KSAFQDIF+DELKKIKD+S+NDY+  LPS PE  DVLWEYEGI DAY
Sbjct: 82  YPHSLNNRQQDFVKSAFQDIFSDELKKIKDQSLNDYDNKLPSAPECDDVLWEYEGIQDAY 141

Query: 121 EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180
           EG+GEEILLEMQRIFYEDL+VD+RQK SE PIVTWEDEEDEFLARAVYEHMQL++EK+ E
Sbjct: 142 EGEGEEILLEMQRIFYEDLDVDVRQKGSEGPIVTWEDEEDEFLARAVYEHMQLNSEKVFE 201

Query: 181 KFWCPICKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240
           KFWCPICKQGEL ENN  IHCTHCGL+L+K NEVT+DLLR RLADVHAEHLDRGCRLKP 
Sbjct: 202 KFWCPICKQGELLENNRSIHCTHCGLQLSKANEVTMDLLRSRLADVHAEHLDRGCRLKPM 261

Query: 241 FCVESRFNITALYISCEGCNTFEVVI 266
           FCVE+RF+ITALYISCEGC TFE+VI
Sbjct: 262 FCVENRFDITALYISCEGCGTFEIVI 287

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BLAST of CsGy1G007660 vs. ExPASy TrEMBL
Match: A0A6J1GT42 (uncharacterized protein LOC111457192 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457192 PE=4 SV=1)

HSP 1 Score: 447 bits (1151), Expect = 1.56e-157
Identity = 217/266 (81.58%), Postives = 240/266 (90.23%), Query Frame = 0


Query: 1   MEEDSPNPVIQTRRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPT 60
           MEE  P+ V QT RSSIKTHPRYNN QSWK+KLRENCCKRVREGR+RLLWKMR    SP 
Sbjct: 1   MEEKDPDSVTQTHRSSIKTHPRYNNHQSWKEKLRENCCKRVREGRNRLLWKMR----SPG 60

Query: 61  YSHSLNNRQQDLIKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEYEGIHDAY 120
           Y HSL++RQQD I+S+FQDIF+DELKKIKDE+ N+  +NLPS PE+ DVLWEYEG+HDAY
Sbjct: 61  YLHSLDDRQQDFIRSSFQDIFSDELKKIKDEAENECYKNLPSAPESDDVLWEYEGLHDAY 120

Query: 121 EGDGEEILLEMQRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILE 180
            G+GEEILLEMQRIFYEDLNVDL+QKESE PIVTWEDEEDEFLARAVYEHMQL++EK L 
Sbjct: 121 GGEGEEILLEMQRIFYEDLNVDLKQKESEGPIVTWEDEEDEFLARAVYEHMQLNSEKDLG 180

Query: 181 KFWCPICKQGELQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPK 240
           K WCPICKQG+LQEN HFIHCTHCG++LNKGNEVTLDLLR RLADVHAEHLDRGCRL+P 
Sbjct: 181 KLWCPICKQGDLQENKHFIHCTHCGVQLNKGNEVTLDLLRSRLADVHAEHLDRGCRLRPM 240

Query: 241 FCVESRFNITALYISCEGCNTFEVVI 266
           FCVESRFNITALYISC+GCNTFEVV+
Sbjct: 241 FCVESRFNITALYISCKGCNTFEVVM 262

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BLAST of CsGy1G007660 vs. TAIR 10
Match: AT4G12760.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 248.4 bits (633), Expect = 6.3e-66
Identity = 130/255 (50.98%), Postives = 176/255 (69.02%), Query Frame = 0


Query: 13  RRSSIKTHPRYNNQQSWKQKLRENCCKRVREGRSRLLWKMRLPMSSPTYSHSLNNRQQDL 72
           +R+S K+ P + +    KQK RENC +RVRE R+RLLWK+R+       S   ++ Q+++
Sbjct: 13  KRTSNKSQPDF-DYSIRKQKFRENCFRRVREDRTRLLWKLRI-------SDCQSSDQKEI 72

Query: 73  IKSAFQDIFADELKKIKDESVNDYNENLPSVPEAADVLWEY-EGIHDAYEGDGEEILLEM 132
           I  AFQDI +DELKKI+D S N  + N     +  D+LWEY EG+   YEGD EEILLEM
Sbjct: 73  INCAFQDIVSDELKKIEDSSRN-LSGNKTLTEDCDDILWEYEEGLKGVYEGDSEEILLEM 132

Query: 133 QRIFYEDLNVDLRQKESEDPIVTWEDEEDEFLARAVYEHMQLSNEKILEKFWCPICKQGE 192
           Q+IFY+DL  +     S   + TWEDEED++LA  V ++M L++E+   + WCPICK+GE
Sbjct: 133 QQIFYKDLLSETNVNGSFVQVETWEDEEDDYLAALVSQNMCLNSEQEESQIWCPICKKGE 192

Query: 193 LQENNHFIHCTHCGLRLNKGNEVTLDLLRCRLADVHAEHLDRGCRLKPKFCVESRFNITA 252
           L EN+  I C  C ++LNKG EV L++L+ RLA+ H EHL RGCRLKP+F V+S +N+ A
Sbjct: 193 LMENHRHIDCNMCDMQLNKGEEVNLNILQERLAEAHGEHLQRGCRLKPEFSVQSVYNLKA 252

Query: 253 LYISCEGCNTFEVVI 267
           LYI+CE C TFEVV+
Sbjct: 253 LYITCEACKTFEVVV 258

The following BLAST results are available for this feature:

BLAST of CsGy1G007660 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G007660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651131.1	1.02e-195	99.62	uncharacterized protein LOC101216926 isoform X1 [Cucumis sativus] >KGN64242.1 hy...	[more]
XP_031737332.1	1.19e-191	98.50	uncharacterized protein LOC101216926 isoform X2 [Cucumis sativus]	[more]
XP_008437393.1	5.21e-189	95.86	PREDICTED: uncharacterized protein LOC103482820 [Cucumis melo]	[more]
XP_038893884.1	4.41e-181	90.98	uncharacterized protein LOC120082685 isoform X1 [Benincasa hispida]	[more]
TYJ99094.1	6.42e-177	82.14	uncharacterized protein E5676_scaffold248G002980 [Cucumis melo var. makuwa]	[more]

BLAST of CsGy1G007660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTY4	4.93e-196	99.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G044910 PE=4 SV=1	[more]
A0A1S3AU18	2.52e-189	95.86	uncharacterized protein LOC103482820 OS=Cucumis melo OX=3656 GN=LOC103482820 PE=...	[more]
A0A5D3BJ40	3.11e-177	82.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1C935	1.03e-161	82.71	uncharacterized protein LOC111008573 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1GT42	1.56e-157	81.58	uncharacterized protein LOC111457192 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CsGy1G007660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12760.1	6.3e-66	50.98	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028158	RPA-interacting protein, N-terminal domain	PFAM	PF14766	RPA_interact_N	coord: 13..55 e-value: 3.2E-10 score: 39.4
IPR028159	RPA-interacting protein, C-terminal domain	PFAM	PF14768	RPA_interact_C	coord: 183..264 e-value: 5.1E-21 score: 75.0
IPR028155	RPA-interacting protein, central domain	PFAM	PF14767	RPA_interact_M	coord: 75..167 e-value: 3.6E-21 score: 75.6
IPR028156	RPA-interacting protein	PANTHER	PTHR31742	RPA-INTERACTING PROTEIN RPAIN	coord: 11..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G007660.2	CsGy1G007660.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding