CsGy1G007320 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTAATATATGAAGCATTAGCGCCGTCTCATACTGAGGCTATCTTCTACCTCTTCAAACCACTGAGACTCAAAAACCTCAATATCACCTTCAAGGTAGAACTCTTCCTTCCATTTTCGCTTCACTTCTCATCGTTATCTCAATCCTCTCTTGTTCTTTCTATTTTCGGATTGCTCTTCTTCATCTTCGACGATGAATTTCTTCTGCCGAGGGTTCTACTGTTGTGTTTTTTCATTTTATAGCCGGATTTTGTTTTTGCTTCTTTTGAGGCGTTCGCGTTCATCGATTTGATATGTATTTATGTCTTTGAAACTTCTCGTCATTGATTTTCGTCTTTATATGTTAAACTTGTTTGTGTTATTGAATTTATTGATTACTTTACAGATCGTGTTTGTGTCTATACCATCTGTAAGCGTTCTTCGATTGTGAGTTTAGAAGTGAAGTAAAGAACAGCTTAGGTTAGAGGATTTAGTGTAGCCGTAGTTACTGTACTGAACAGGAGCTTACATTACATGAACATTACATTTCTTGTATTTTTCTCAGCGATTGTGATAAATGATGAACGGATAAATTTATACCTTGATAATGTTCAAGGTAGACCTCTTCCTTCCATTTTCGGATTGCTTTTCTTCATCTTCGACGATGAACATCATCTGCCGAGGGTTCTACTGTGGCGTATTTTCATTTTCTAACCGGATTTTGTTTTTACTTCTGTTGAGGTGTTTGTGTTCATCGATTTGATATGTATGTACGTGTTTGAAACTTCTCGTTATTCATTTCTTTGTGTAATTGGCTTTCTTGATTATTTTACAGAACGTGTTTTAATCTTCACTTCTCATCGTTATCTAAATCTTCTCTTGTTCTTACTCATTTCGGATTGCTCTTCTTCATCTTCGACGATGGACTTCTTATGCCGAGGTGTTTGTGTTATTGGATTTCTTGATTATTTTACAGAACGTGTTTAAATCTCTACTGTTCTTTAATTGCGTTTTTCGATTGTGAGTTTAGAAGTGAAGGAAAGAACAGCTTAGGTTATAGGATTTAGTGGAGCTGAAGTTACTGTACGGATGAGGAGCTTACATTTCATGAACATTATATTTTTTGTATTTTTCTCAAAGATTATGATAACACGATGAACAGATAATTTATACTATAGAAATTAACTTTTTGGATAAGCTAGGGCTTGATAACGTATTCTAGTGCTGTTTTCCTTTTAGATACTGCAACTATTACATGAATTTTCGGATGAGATTTCTGTTTGTTATAGTTTTTAAAAAACGTGACGAAGCACCTGTATGTGTTTATCTGTTTTAAATTTCTTTTCTTCGTTAGCGCTTTTATGTTCTTTAATTGCTGTAATATTTCAAGTTCGAATGTAGTTTTTAATCATTTTTCAAGTTCTCAATTCTCATAAATTTTATCCTTTTTGTTTCATATTAAAAGAAACAATCTCATAAATCTTATCCTTGTTCTTCCTATGTTGTGCAGATGGATCATACGAAGCTCCAGAAAATGGCTGGTGCAGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGTTGGTTGCCTTTTTATCTTTTGAAAGTTCCGAAAAGTGTAAGAAGATTTAATCATTTGTCGCTTGATTTATTTAATAAGGAATCATAAATTATTTCAACCGTAAGATGGAACTCTTATAAAATTTACCTGGATGTTTATCATTCTAGTTTTTTTTTGGTAAATAATTTATTTGAACCATGCTGATATCCATTCTCCCATCCATTTCTGCTTTTCTCAATTCTCTCATTCATCGTTCTATTAATTTCAGCCATGCATTTTTATACTAACTAAGAATTTCAATAGCTCGTAGTTATTCTTAAAATTTCTGATATGCAGATAATGTTTTACGACAACATATATAATTTTTCTTTTTCCAATTTTTGTCAATTTAAATGGTACTTTTTAATTGACTAATGAGTGAATATACTAACATAAATTCCATGCTTGTTTGAGTGTTGGATCTTTCAGTTTGGCATATGTTCTTGATATTTCTCGTGCTTACTGTAATGGAGGCGCTGTTGAAATATCATTTTCATCTTCTTTTCTTTAAGATCAATCGTTTGCTTTCTTAATTTTTAGTTTTCTTTCTTATTTTGTCAATTAAAGGAAGAAGAAGGCTGTCCACAAGACAACTACCACAGACGATAAACGGCTTCAAAGTACCTTGAAGAGAATAGGAGTTAATGCAATCCCTGCTATTGAGGAAGTCAACATTTTCAAGGATGATGTAGTTATTCAATTTACTAACCCAAAGGGTAAATTTATGCAACTATATATATACGCATGGTTGTTTACCATCAATATCTTGATATGAAATTCATTTAGTTGTTTCTTGTTATCTATTTCAGTTCAGGCTTCTATTGCGGCAAACACATGGGTTGTTAGTGGTTCTCCTCAAACGAAAAGTATGTCTTCTTACTCTCACCACATTTGCATATAATAAACATTTAACTGATCTCATGTTCTAAATTCTAGGGCATTCTTGTAGTAGATATATCGAAAAAACTGAAACAATTTTTTCTTGCAAATTTTGGTCATACGTTTTAAAAAGAACAAATAGTCCCTAAATGAAAATGACACTACAGAGATGTCAACAGACTTGGCTGTTAGTAATATAACTTCTCCTATTTAATTGTATAATCAATATTGCTACCCTATTATTTCAATCATTCTTTGATATCTCAAACCATTTTTAATACAGTGATGAATATTAATTATCGAAAGTTTTCCTAAAGTGCTGTCATTTGATGAAAAAACCACCGCTTACTTTTGTAAGACCAAATTTTGTTATTTGATGAGAAAAAAAAGCTTTATTTGAACGGTTACATGTTTGTAGCTGTATTGACAATGCTGTTGATTGTACACGAACCTTCAAGTATGTTTAGGAATTTAATATGATTAGTACACTGTATCGTTTGAATTAAATATGAAGCTATTCTAATGAAGCATGTTACAAAATAGCCTTGAAACTTTTTCAGATAGTTCTTTTTAGAAAATTTAAATTAGTCTTGAATCTCTTATCCTTTTTTCTTCTTCTTTTAATGTGCTTTTGGAATGCGGTAAAGTTCTTCGGGATTAGGATAATATTGTAAATGATCTAATGCAAAATAACATGCTGCCTGCTGATGACTGCCGTTGGCTTGGAATTTGAAACAAGGCTAATATGGTTTCCTTCAACTATGTGTAAAACAAAGGGTTTACTTCAATTGTGACATTTGATGTGACAGTATTTTTTTTAACATGTTTGAAGGAGTACACTTTGTTAATTTATTGAATGAATGCGTTCTTACCAAAAGTTATTTCAAAAAGTCATGCTAGAGAATGACACTTCCTAGTTGCCTCTCTTAGGGTGGCATCTTCATGCTAGAAAATGACACTCCGCATACATTTTTTTTCTTCCCTCAATTAAAAAGATGTTTTCATATAAGGAAAACAAACATGGCATTGGGTGTTTTAGTTTTGACTTGTTTGTTTCTCATGGTGAAGCTTTTCTATTAACTCTGGCCAAGATTTTCATTGCGCTATTTGCCTATCTTTTGTTATTATGTATCACGACCAGCTCTAATATTTTAATTTCTTCTCTCAGAATTGCAGGATATTCTGCCCGGAATTATCAACCAATTGGGTAAGTACACGTGATTGCATTTTTGTGTTCCATCCTGAGTCCTACCTAAAATAACAAGACTTGTTTACGTGTTTAAATTTTAGGACCCGATAACTTAGACAACTTGAGGAAGTTGGCTGAGCAGTTCCAGAAGCAAGCACCTGGAGTAGGTGCTGGTGCAGCAGCAGCTGCCGCCAATGGTGAGGATGATGACGATGATGTTCCTGACCTTGTTGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGAAGCAAGCCTCCTAG CTAATATATGAAGCATTAGCGCCGTCTCATACTGAGGCTATCTTCTACCTCTTCAAACCACTGAGACTCAAAAACCTCAATATCACCTTCAAGAACGTGTTTTAATCTTCACTTCTCATCGTTATCTAAATCTTCTCTTGTTCTTACTCATTTCGGATTGCTCTTCTTCATCTTCGACGATGGACTTCTTATGCCGAGATGGATCATACGAAGCTCCAGAAAATGGCTGGTGCAGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGAAGAAGAAGGCTGTCCACAAGACAACTACCACAGACGATAAACGGCTTCAAAGTACCTTGAAGAGAATAGGAGTTAATGCAATCCCTGCTATTGAGGAAGTCAACATTTTCAAGGATGATGTAGTTATTCAATTTACTAACCCAAAGGTTCAGGCTTCTATTGCGGCAAACACATGGGTTGTTAGTGGTTCTCCTCAAACGAAAAAATTGCAGGATATTCTGCCCGGAATTATCAACCAATTGGGACCCGATAACTTAGACAACTTGAGGAAGTTGGCTGAGCAGTTCCAGAAGCAAGCACCTGGAGTAGGTGCTGGTGCAGCAGCAGCTGCCGCCAATGGTGAGGATGATGACGATGATGTTCCTGACCTTGTTGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGAAGCAAGCCTCCTAG ATGGATCATACGAAGCTCCAGAAAATGGCTGGTGCAGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGAAGAAGAAGGCTGTCCACAAGACAACTACCACAGACGATAAACGGCTTCAAAGTACCTTGAAGAGAATAGGAGTTAATGCAATCCCTGCTATTGAGGAAGTCAACATTTTCAAGGATGATGTAGTTATTCAATTTACTAACCCAAAGGTTCAGGCTTCTATTGCGGCAAACACATGGGTTGTTAGTGGTTCTCCTCAAACGAAAAAATTGCAGGATATTCTGCCCGGAATTATCAACCAATTGGGACCCGATAACTTAGACAACTTGAGGAAGTTGGCTGAGCAGTTCCAGAAGCAAGCACCTGGAGTAGGTGCTGGTGCAGCAGCAGCTGCCGCCAATGGTGAGGATGATGACGATGATGTTCCTGACCTTGTTGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGAAGCAAGCCTCCTAG MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPGVGAGAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS* Homology
BLAST of CsGy1G007320 vs. ExPASy Swiss-Prot
Match: Q9CAT7 (Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana OX=3702 GN=At1g73230 PE=2 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.6e-64 Identity = 131/160 (81.88%), Postives = 140/160 (87.50%), Query Frame = 0
BLAST of CsGy1G007320 vs. ExPASy Swiss-Prot
Match: Q9SMW7 (Basic transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=BTF3 PE=1 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 2.3e-63 Identity = 132/160 (82.50%), Postives = 142/160 (88.75%), Query Frame = 0
BLAST of CsGy1G007320 vs. ExPASy Swiss-Prot
Match: Q6PC91 (Transcription factor BTF3 homolog 4 OS=Danio rerio OX=7955 GN=btf3l4 PE=2 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 8.2e-37 Identity = 87/161 (54.04%), Postives = 118/161 (73.29%), Query Frame = 0
BLAST of CsGy1G007320 vs. ExPASy Swiss-Prot
Match: P20290 (Transcription factor BTF3 OS=Homo sapiens OX=9606 GN=BTF3 PE=1 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 8.2e-37 Identity = 86/161 (53.42%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of CsGy1G007320 vs. ExPASy Swiss-Prot
Match: Q64152 (Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=1 SV=3) HSP 1 Score: 154.8 bits (390), Expect = 8.2e-37 Identity = 86/161 (53.42%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_004137521.1 (nascent polypeptide-associated complex subunit beta [Cucumis sativus] >XP_031743054.1 nascent polypeptide-associated complex subunit beta [Cucumis sativus]) HSP 1 Score: 311 bits (797), Expect = 1.36e-106 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_008467234.1 (PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X2 [Cucumis melo]) HSP 1 Score: 305 bits (780), Expect = 5.68e-104 Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 0
BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_016900101.1 (PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X1 [Cucumis melo]) HSP 1 Score: 305 bits (780), Expect = 6.30e-104 Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 0
BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_038895154.1 (nascent polypeptide-associated complex subunit beta-like [Benincasa hispida]) HSP 1 Score: 298 bits (763), Expect = 2.00e-101 Identity = 158/163 (96.93%), Postives = 159/163 (97.55%), Query Frame = 0
BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_022954733.1 (nascent polypeptide-associated complex subunit beta-like [Cucurbita moschata] >XP_022994949.1 nascent polypeptide-associated complex subunit beta-like [Cucurbita maxima] >XP_023542222.1 nascent polypeptide-associated complex subunit beta-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023542223.1 nascent polypeptide-associated complex subunit beta-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG7012168.1 Basic transcription factor 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 292 bits (748), Expect = 3.74e-99 Identity = 155/163 (95.09%), Postives = 157/163 (96.32%), Query Frame = 0
BLAST of CsGy1G007320 vs. ExPASy TrEMBL
Match: A0A0A0LTU8 (Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus OX=3659 GN=Csa_1G043055 PE=3 SV=1) HSP 1 Score: 311 bits (797), Expect = 9.14e-106 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsGy1G007320 vs. ExPASy TrEMBL
Match: A0A1S3CT31 (Nascent polypeptide-associated complex subunit beta OS=Cucumis melo OX=3656 GN=LOC103504634 PE=3 SV=1) HSP 1 Score: 305 bits (780), Expect = 2.75e-104 Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 0
BLAST of CsGy1G007320 vs. ExPASy TrEMBL
Match: A0A1S4DVT8 (Nascent polypeptide-associated complex subunit beta OS=Cucumis melo OX=3656 GN=LOC103504634 PE=3 SV=1) HSP 1 Score: 305 bits (780), Expect = 3.05e-104 Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 0
BLAST of CsGy1G007320 vs. ExPASy TrEMBL
Match: A0A6J1K4A7 (Nascent polypeptide-associated complex subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111490535 PE=3 SV=1) HSP 1 Score: 292 bits (748), Expect = 1.81e-99 Identity = 155/163 (95.09%), Postives = 157/163 (96.32%), Query Frame = 0
BLAST of CsGy1G007320 vs. ExPASy TrEMBL
Match: A0A6J1GRY3 (Nascent polypeptide-associated complex subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111456902 PE=3 SV=1) HSP 1 Score: 292 bits (748), Expect = 1.81e-99 Identity = 155/163 (95.09%), Postives = 157/163 (96.32%), Query Frame = 0
BLAST of CsGy1G007320 vs. TAIR 10
Match: AT1G73230.1 (Nascent polypeptide-associated complex NAC ) HSP 1 Score: 246.9 bits (629), Expect = 1.1e-65 Identity = 131/160 (81.88%), Postives = 140/160 (87.50%), Query Frame = 0
BLAST of CsGy1G007320 vs. TAIR 10
Match: AT1G17880.1 (basic transcription factor 3 ) HSP 1 Score: 243.0 bits (619), Expect = 1.6e-64 Identity = 132/160 (82.50%), Postives = 142/160 (88.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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