CsGy1G006710 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G006710
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionProtein kinase domain-containing protein
LocationGy14Chr1: 4335798 .. 4336457 (-)
RNA-Seq ExpressionCsGy1G006710
SyntenyCsGy1G006710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGATGGATCTTTGGCGTCCAGGAGCTCCTCTTACCATTCTTGTCAACACTCGGGTTACGTGCCTGTGCACTTCAGTAATGATGAGGAAAGGGACTATCCAGGTTTGTTGAAGAAGAGTTACACTGAAGTGTTGAAGATAGGATTCAGTTTAAATTGGAGTGCCCATAACTGTAGCAACTGTGAGACAATTGGTGGCAGATGTGGGTTTGAAAGGAACCAGTTTGTTTGCTTTTGTGCTCATGGACCTCATCTCGAAACCTGCGAAGACGGTAACATTCTAAAAATATTTAGTTCTGTAGAATAGGAAATGAGTTTATGTATGGATGAACTGAAGTTTTTATTGCTGATTTGAAATTTGGCGGTCTTTTTCAATACAAAATTTTTATTGTTTTTCCGACTTCTTTTTTCGCTTTGCTCACGATCTGTTTGGTGGTGGAACCATTCTCTTCTATCTTCGAAGACCTAAATCTTAACTTCATACCTCCACCATACAGAGACATAGCAACAACCAATCTCCACAGATCGAAGCCATCCAGATTTGAATATCAATTTTCCATGAAGTAAACAGTTGACTAGTTCAAGCAGGAAAGCAACTGCAGATATAATTAATGGCGAAATCTTTACAGAGATGGAGCGGGGTCTTCTTCTGAATTGA

mRNA sequence

ATGGATGATGGATCTTTGGCGTCCAGGAGCTCCTCTTACCATTCTTGTCAACACTCGGGTTACGTGCCTGTGCACTTCAGTAATGATGAGGAAAGGGACTATCCAGGTTTGTTGAAGAAGAGTTACACTGAAGTGTTGAAGATAGGATTCAGTTTAAATTGGAGTGCCCATAACTGTAGCAACTGTGAGACAATTGGTGGCAGATGTGGGTTTGAAAGGAACCAGTTTGTTTGCTTTTGTGCTCATGGACCTCATCTCGAAACCTGCGAAGACGAGATGGAGCGGGGTCTTCTTCTGAATTGA

Coding sequence (CDS)

ATGGATGATGGATCTTTGGCGTCCAGGAGCTCCTCTTACCATTCTTGTCAACACTCGGGTTACGTGCCTGTGCACTTCAGTAATGATGAGGAAAGGGACTATCCAGGTTTGTTGAAGAAGAGTTACACTGAAGTGTTGAAGATAGGATTCAGTTTAAATTGGAGTGCCCATAACTGTAGCAACTGTGAGACAATTGGTGGCAGATGTGGGTTTGAAAGGAACCAGTTTGTTTGCTTTTGTGCTCATGGACCTCATCTCGAAACCTGCGAAGACGAGATGGAGCGGGGTCTTCTTCTGAATTGA

Protein sequence

MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNCETIGGRCGFERNQFVCFCAHGPHLETCEDEMERGLLLN*
Homology
BLAST of CsGy1G006710 vs. ExPASy Swiss-Prot
Match: P0C5E2 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3)

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0

Query: 15  SCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNCETIGGRCGFERN 74
           SCQ    VPV  SN+ +     ++  +Y E+LK GF LNW+A++C  C T GGRCG ++ 
Sbjct: 180 SCQKLVDVPVLASNESD-----VMGMTYVEILKRGFVLNWTANSCFRCITSGGRCGTDQQ 239

Query: 75  QFVCFCAHGPHL-ETC 90
           +FVC C  GP L +TC
Sbjct: 240 EFVCLCPDGPKLHDTC 250

BLAST of CsGy1G006710 vs. NCBI nr
Match: KAE8652548.1 (hypothetical protein Csa_014289 [Cucumis sativus])

HSP 1 Score: 200 bits (508), Expect = 1.81e-64
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0

Query: 1  MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCS 60
          MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLK+GFSLNWSA NCS
Sbjct: 1  MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKVGFSLNWSAQNCS 60

Query: 61 NCETIGGRCGFERNQFVCFCAHGPHLETCED 91
          NCETIGGRCGFERNQFVCFCAHGPHLETCED
Sbjct: 61 NCETIGGRCGFERNQFVCFCAHGPHLETCED 91

BLAST of CsGy1G006710 vs. NCBI nr
Match: XP_038893811.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Benincasa hispida])

HSP 1 Score: 131 bits (330), Expect = 1.72e-35
Identity = 59/90 (65.56%), Postives = 71/90 (78.89%), Query Frame = 0

Query: 1   MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCS 60
             DGSL S +SSYHSCQ    +P+HFSN+EE D+  L KKSY++VLK+GFSLNWSA NCS
Sbjct: 157 FSDGSLGSINSSYHSCQSLVAMPLHFSNNEEEDFNELFKKSYSDVLKMGFSLNWSAQNCS 216

Query: 61  NCETIGGRCGFERNQFVCFCAHGPHLETCE 90
            CET GGRCGF+ N+FV FC+ G HLETC+
Sbjct: 217 KCETSGGRCGFQSNKFVRFCSDGCHLETCK 246

BLAST of CsGy1G006710 vs. NCBI nr
Match: XP_038894007.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 [Benincasa hispida])

HSP 1 Score: 126 bits (316), Expect = 3.02e-31
Identity = 58/90 (64.44%), Postives = 71/90 (78.89%), Query Frame = 0

Query: 1   MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCS 60
             DGSL S +SSYHSCQ    +P+HFSN EE+ +  L KKSY++VLK+GFSLNWSA NCS
Sbjct: 157 FSDGSLGSINSSYHSCQTLVEMPLHFSN-EEKVFNELYKKSYSDVLKMGFSLNWSAQNCS 216

Query: 61  NCETIGGRCGFERNQFVCFCAHGPHLETCE 90
            CET GGRCGF+ N+FVCFC+ G +LETC+
Sbjct: 217 KCETSGGRCGFQSNKFVCFCSDGSYLETCK 245

BLAST of CsGy1G006710 vs. NCBI nr
Match: XP_038894040.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2 [Benincasa hispida])

HSP 1 Score: 126 bits (316), Expect = 3.32e-31
Identity = 58/89 (65.17%), Postives = 71/89 (79.78%), Query Frame = 0

Query: 3   DGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNC 62
           DG L   + S +SCQ S  VPV  SN+++ D+ GLL+KSY+ VLK+GFSLNW+A NCSNC
Sbjct: 159 DGFLEFMNFSSNSCQSSVEVPVDVSNEDD-DFSGLLRKSYSGVLKMGFSLNWNAQNCSNC 218

Query: 63  ETIGGRCGFERNQFVCFCAHGPHLETCED 91
           ET GGRCGFERNQFVCFC  GPHL+TC++
Sbjct: 219 ETSGGRCGFERNQFVCFCPDGPHLKTCQE 246

BLAST of CsGy1G006710 vs. NCBI nr
Match: XP_022923748.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Cucurbita moschata])

HSP 1 Score: 120 bits (300), Expect = 8.00e-31
Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0

Query: 3   DGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNC 62
           DG +   + S  SCQ S  VP+   N ++ D+ GLL+KSY++VLK+GF+LNWSA NCSNC
Sbjct: 159 DGFMEHMNFSVDSCQSSVEVPIDIPNQDD-DFSGLLRKSYSDVLKMGFTLNWSAQNCSNC 218

Query: 63  ETIGGRCGFERNQFVCFCAHGPHLETCE 90
           ET GGRCGFE N+FVCFC  GPHL+TC+
Sbjct: 219 ETSGGRCGFESNEFVCFCPDGPHLQTCK 245

BLAST of CsGy1G006710 vs. ExPASy TrEMBL
Match: A0A0A0LTP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042490 PE=4 SV=1)

HSP 1 Score: 160 bits (406), Expect = 6.71e-45
Identity = 77/91 (84.62%), Postives = 79/91 (86.81%), Query Frame = 0

Query: 1  MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCS 60
          MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLK+GFSLNWSA NCS
Sbjct: 1  MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKVGFSLNWSAQNCS 60

Query: 61 NCETIGGRCGFERNQFVCFCAHGPHLETCED 91
          NCETIGGRCGFERNQ +C     P     ED
Sbjct: 61 NCETIGGRCGFERNQ-ICLVVE-PFSSIFED 89

BLAST of CsGy1G006710 vs. ExPASy TrEMBL
Match: A0A6J1EAH3 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Cucurbita moschata OX=3662 GN=LOC111431361 PE=4 SV=1)

HSP 1 Score: 120 bits (300), Expect = 3.87e-31
Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0

Query: 3   DGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNC 62
           DG +   + S  SCQ S  VP+   N ++ D+ GLL+KSY++VLK+GF+LNWSA NCSNC
Sbjct: 159 DGFMEHMNFSVDSCQSSVEVPIDIPNQDD-DFSGLLRKSYSDVLKMGFTLNWSAQNCSNC 218

Query: 63  ETIGGRCGFERNQFVCFCAHGPHLETCE 90
           ET GGRCGFE N+FVCFC  GPHL+TC+
Sbjct: 219 ETSGGRCGFESNEFVCFCPDGPHLQTCK 245

BLAST of CsGy1G006710 vs. ExPASy TrEMBL
Match: A0A5D3BLF4 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002120 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 5.19e-30
Identity = 53/94 (56.38%), Postives = 74/94 (78.72%), Query Frame = 0

Query: 3   DGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNC 62
           +G L   + S +SCQ S  VP+ F+N+++ D+ GLL+K+YT++LK+GFSLNW A  CSNC
Sbjct: 159 EGYLEFMNFSSNSCQSSVEVPLDFNNEDD-DFTGLLRKNYTDLLKMGFSLNWRAQICSNC 218

Query: 63  ETIGGRCGFERNQFVCFCAHGPHLETCEDEMERG 96
           ET GGRCG E+NQFVCFC  GPH++TC++E ++G
Sbjct: 219 ETSGGRCGVEKNQFVCFCPDGPHIKTCKEEEKKG 251

BLAST of CsGy1G006710 vs. ExPASy TrEMBL
Match: A0A1S4DTK4 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499532 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 5.19e-30
Identity = 53/94 (56.38%), Postives = 74/94 (78.72%), Query Frame = 0

Query: 3   DGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNC 62
           +G L   + S +SCQ S  VP+ F+N+++ D+ GLL+K+YT++LK+GFSLNW A  CSNC
Sbjct: 159 EGYLEFMNFSSNSCQSSVEVPLDFNNEDD-DFTGLLRKNYTDLLKMGFSLNWRAQICSNC 218

Query: 63  ETIGGRCGFERNQFVCFCAHGPHLETCEDEMERG 96
           ET GGRCG E+NQFVCFC  GPH++TC++E ++G
Sbjct: 219 ETSGGRCGVEKNQFVCFCPDGPHIKTCKEEEKKG 251

BLAST of CsGy1G006710 vs. ExPASy TrEMBL
Match: A0A0A0LQU2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042530 PE=4 SV=1)

HSP 1 Score: 115 bits (289), Expect = 1.39e-29
Identity = 50/89 (56.18%), Postives = 70/89 (78.65%), Query Frame = 0

Query: 3   DGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNC 62
           +G L   + S +SCQ S  VP+ F+N+++ D+ GLL+K+YT++LK+GFSLNWS  +CS C
Sbjct: 159 EGYLEFMNFSSNSCQSSVEVPMDFNNEDD-DFTGLLRKNYTDLLKMGFSLNWSGQSCSTC 218

Query: 63  ETIGGRCGFERNQFVCFCAHGPHLETCED 91
           +T GGRCG E+NQFVCFC  GPHL+TC++
Sbjct: 219 DTSGGRCGVEKNQFVCFCPDGPHLKTCKE 246

BLAST of CsGy1G006710 vs. TAIR 10
Match: AT1G18390.2 (Protein kinase superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-13
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0

Query: 15  SCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNCETIGGRCGFERN 74
           SCQ    VPV  SN+ +     ++  +Y E+LK GF LNW+A++C  C T GGRCG ++ 
Sbjct: 180 SCQKLVDVPVLASNESD-----VMGMTYVEILKRGFVLNWTANSCFRCITSGGRCGTDQQ 239

Query: 75  QFVCFCAHGPHL-ETC 90
           +FVC C  GP L +TC
Sbjct: 240 EFVCLCPDGPKLHDTC 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C5E21.5e-1246.05LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=A... [more]
Match NameE-valueIdentityDescription
KAE8652548.11.81e-6497.80hypothetical protein Csa_014289 [Cucumis sativus][more]
XP_038893811.11.72e-3565.56LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Ben... [more]
XP_038894007.13.02e-3164.44LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 [Ben... [more]
XP_038894040.13.32e-3165.17LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isof... [more]
XP_022923748.18.00e-3160.23LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Cuc... [more]
Match NameE-valueIdentityDescription
A0A0A0LTP46.71e-4584.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042490 PE=4 SV=1[more]
A0A6J1EAH33.87e-3160.23LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=C... [more]
A0A5D3BLF45.19e-3056.38LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isof... [more]
A0A1S4DTK45.19e-3056.38LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isof... [more]
A0A0A0LQU21.39e-2956.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042530 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G18390.21.1e-1346.05Protein kinase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032872Wall-associated receptor kinase, C-terminalPFAMPF14380WAK_assoccoord: 9..82
e-value: 1.0E-15
score: 58.3
IPR044652LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1/1.2/1.3/1.4PANTHERPTHR46008LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4coord: 10..94
NoneNo IPR availablePANTHERPTHR46008:SF20LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2coord: 10..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G006710.2CsGy1G006710.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0030247 polysaccharide binding
molecular_function GO:0004672 protein kinase activity