CsGy1G005910 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G005910
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr1: 3849683 .. 3850172 (+)
RNA-Seq Expression	CsGy1G005910
Synteny	CsGy1G005910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATTTCGTCGGAAGAATTTTGGGTTTGTCCGCTGAACTTCGCTGCCGTTCACCATGGCGAAAGCTGCTTCTTCTTTATTGCAAACCCTAAGGCGCTACATTAAGAAACCTTGGGAGATCACTGGCCCGTGTGCAGATCCAGAGTACAGATCAGCGGTTCCGAGCGCTTTAGAGTACAGGGTCGTTTGCCCCGCCACCATAAAGGAGAAAGCCATTATCCCTACATCCAATCCCGAAACCGTTTTTGACATTAAGTATTACACTCGCGACCAGCGTCGGAATCGCCCTCCGATTCGACGCACCATCCTCAAGAAACCCGACGTCGAGAAGATGATGAAGGAGATCAAATTCGACCCTGCTGACTTCCCCAAAGTTTATCTCACTGCCGCGATTGAGGAGGATATGAATACCCATGGGGGTGGTTATCAGAAGTAGAAAGGTTAGTCGTTTTTTGTTTTTATTTTTGGTCTCCTTCAACTTTTGGATTTA

mRNA sequence

GTTATTTCGTCGGAAGAATTTTGGGTTTGTCCGCTGAACTTCGCTGCCGTTCACCATGGCGAAAGCTGCTTCTTCTTTATTGCAAACCCTAAGGCGCTACATTAAGAAACCTTGGGAGATCACTGGCCCGTGTGCAGATCCAGAGTACAGATCAGCGGTTCCGAGCGCTTTAGAGTACAGGGTCGTTTGCCCCGCCACCATAAAGGAGAAAGCCATTATCCCTACATCCAATCCCGAAACCGTTTTTGACATTAAGTATTACACTCGCGACCAGCGTCGGAATCGCCCTCCGATTCGACGCACCATCCTCAAGAAACCCGACGTCGAGAAGATGATGAAGGAGATCAAATTCGACCCTGCTGACTTCCCCAAAGTTTATCTCACTGCCGCGATTGAGGAGGATATGAATACCCATGGGGGTGGTTATCAGAAGTAGAAAGGTTAGTCGTTTTTTGTTTTTATTTTTGGTCTCCTTCAACTTTTGGATTTA

Coding sequence (CDS)

ATGGCGAAAGCTGCTTCTTCTTTATTGCAAACCCTAAGGCGCTACATTAAGAAACCTTGGGAGATCACTGGCCCGTGTGCAGATCCAGAGTACAGATCAGCGGTTCCGAGCGCTTTAGAGTACAGGGTCGTTTGCCCCGCCACCATAAAGGAGAAAGCCATTATCCCTACATCCAATCCCGAAACCGTTTTTGACATTAAGTATTACACTCGCGACCAGCGTCGGAATCGCCCTCCGATTCGACGCACCATCCTCAAGAAACCCGACGTCGAGAAGATGATGAAGGAGATCAAATTCGACCCTGCTGACTTCCCCAAAGTTTATCTCACTGCCGCGATTGAGGAGGATATGAATACCCATGGGGGTGGTTATCAGAAGTAG

Protein sequence

MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTHGGGYQK*

Homology

[Close]

BLAST of CsGy1G005910 vs. NCBI nr
Match: KGN64061.1 (hypothetical protein Csa_013259 [Cucumis sativus])

HSP 1 Score: 258 bits (658), Expect = 1.33e-86
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP
Sbjct: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120

Query: 121 GGGYQK 126
           GGGYQK
Sbjct: 121 GGGYQK 126

[Close]

BLAST of CsGy1G005910 vs. NCBI nr
Match: XP_004137440.2 (uncharacterized protein LOC101204278, partial [Cucumis sativus])

HSP 1 Score: 258 bits (658), Expect = 1.63e-86
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP
Sbjct: 7   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 66

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH
Sbjct: 67  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 126

Query: 121 GGGYQK 126
           GGGYQK
Sbjct: 127 GGGYQK 132

[Close]

BLAST of CsGy1G005910 vs. NCBI nr
Match: TYJ98943.1 (uncharacterized protein E5676_scaffold248G001440 [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (640), Expect = 7.43e-84
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP
Sbjct: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKE KFDPADFPKVYLTAAIEEDMN  
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120

Query: 121 GGGYQK 126
           GGGYQK
Sbjct: 121 GGGYQK 126

[Close]

BLAST of CsGy1G005910 vs. NCBI nr
Match: XP_008451315.2 (PREDICTED: uncharacterized protein LOC103492624, partial [Cucumis melo])

HSP 1 Score: 251 bits (640), Expect = 8.78e-84
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP
Sbjct: 6   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 65

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKE KFDPADFPKVYLTAAIEEDMN  
Sbjct: 66  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 125

Query: 121 GGGYQK 126
           GGGYQK
Sbjct: 126 GGGYQK 131

[Close]

BLAST of CsGy1G005910 vs. NCBI nr
Match: XP_022923781.1 (uncharacterized protein LOC111431390, partial [Cucurbita moschata])

HSP 1 Score: 237 bits (604), Expect = 4.64e-78
Identity = 113/126 (89.68%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           MAKA+SS  QTL+RYIKKPWEITGPCADPEY+ AVPSA+EYRV CPAT KEKAI+PTSNP
Sbjct: 22  MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 81

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKE KFDPADFPKVYLTAAIEEDMN  
Sbjct: 82  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 141

Query: 121 GGGYQK 126
           GGGYQK
Sbjct: 142 GGGYQK 147

[Close]

BLAST of CsGy1G005910 vs. ExPASy TrEMBL
Match: A0A0A0LVM5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039260 PE=4 SV=1)

HSP 1 Score: 258 bits (658), Expect = 6.46e-87
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP
Sbjct: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120

Query: 121 GGGYQK 126
           GGGYQK
Sbjct: 121 GGGYQK 126

[Close]

BLAST of CsGy1G005910 vs. ExPASy TrEMBL
Match: A0A5D3BI32 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001440 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 3.60e-84
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP
Sbjct: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKE KFDPADFPKVYLTAAIEEDMN  
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120

Query: 121 GGGYQK 126
           GGGYQK
Sbjct: 121 GGGYQK 126

[Close]

BLAST of CsGy1G005910 vs. ExPASy TrEMBL
Match: A0A1S3BR63 (uncharacterized protein LOC103492624 OS=Cucumis melo OX=3656 GN=LOC103492624 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 4.25e-84
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP
Sbjct: 6   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 65

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKE KFDPADFPKVYLTAAIEEDMN  
Sbjct: 66  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 125

Query: 121 GGGYQK 126
           GGGYQK
Sbjct: 126 GGGYQK 131

[Close]

BLAST of CsGy1G005910 vs. ExPASy TrEMBL
Match: A0A6J1E7N6 (uncharacterized protein LOC111431390 OS=Cucurbita moschata OX=3662 GN=LOC111431390 PE=4 SV=1)

HSP 1 Score: 237 bits (604), Expect = 2.24e-78
Identity = 113/126 (89.68%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           MAKA+SS  QTL+RYIKKPWEITGPCADPEY+ AVPSA+EYRV CPAT KEKAI+PTSNP
Sbjct: 22  MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 81

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKE KFDPADFPKVYLTAAIEEDMN  
Sbjct: 82  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 141

Query: 121 GGGYQK 126
           GGGYQK
Sbjct: 142 GGGYQK 147

[Close]

BLAST of CsGy1G005910 vs. ExPASy TrEMBL
Match: A0A6J1KK07 (uncharacterized protein LOC111495303 OS=Cucurbita maxima OX=3661 GN=LOC111495303 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 7.55e-77
Identity = 110/126 (87.30%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           MAKA+SS  QTL+RYIKKPWEITGPCADPEY+ AVPSA+EYRV CPA+ KEKAI+PTSNP
Sbjct: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPASTKEKAIVPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
           ETVFDIKYY+RDQRRNRPPIRRTILKKPDVEKMMKE KFDPADFPKVYLTAAIEED+N  
Sbjct: 61  ETVFDIKYYSRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINAR 120

Query: 121 GGGYQK 126
           GGGYQK
Sbjct: 121 GGGYQK 126

[Close]

BLAST of CsGy1G005910 vs. TAIR 10
Match: AT5G08060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 179.5 bits (454), Expect = 1.7e-45
Identity = 85/127 (66.93%), Postives = 105/127 (82.68%), Query Frame = 0


Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           ++ AASSL+Q LRRYIKKPW+ITGPCA PEY  AVP A EYR+ CPATI E+AI+P+S+P
Sbjct: 5   VSTAASSLVQNLRRYIKKPWQITGPCAHPEYLEAVPKATEYRLRCPATIDEEAIVPSSDP 64

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIK-FDPADFPKVYLTAAIEEDMNT 120
           ETV++I Y+ RDQRRNRPPIRR +L K +V +MM E K FD +DFPKVYLT  +EED++T
Sbjct: 65  ETVYNIVYHGRDQRRNRPPIRRYVLTKDNVVQMMNEKKSFDVSDFPKVYLTTTVEEDLDT 124

Query: 121 HGGGYQK 127
            GGGY+K
Sbjct: 125 RGGGYEK 131

The following BLAST results are available for this feature:

BLAST of CsGy1G005910 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G005910 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64061.1	1.33e-86	100.00	hypothetical protein Csa_013259 [Cucumis sativus]	[more]
XP_004137440.2	1.63e-86	100.00	uncharacterized protein LOC101204278, partial [Cucumis sativus]	[more]
TYJ98943.1	7.43e-84	97.62	uncharacterized protein E5676_scaffold248G001440 [Cucumis melo var. makuwa]	[more]
XP_008451315.2	8.78e-84	97.62	PREDICTED: uncharacterized protein LOC103492624, partial [Cucumis melo]	[more]
XP_022923781.1	4.64e-78	89.68	uncharacterized protein LOC111431390, partial [Cucurbita moschata]	[more]

BLAST of CsGy1G005910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVM5	6.46e-87	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039260 PE=4 SV=1	[more]
A0A5D3BI32	3.60e-84	97.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BR63	4.25e-84	97.62	uncharacterized protein LOC103492624 OS=Cucumis melo OX=3656 GN=LOC103492624 PE=...	[more]
A0A6J1E7N6	2.24e-78	89.68	uncharacterized protein LOC111431390 OS=Cucurbita moschata OX=3662 GN=LOC1114313...	[more]
A0A6J1KK07	7.55e-77	87.30	uncharacterized protein LOC111495303 OS=Cucurbita maxima OX=3661 GN=LOC111495303...	[more]

BLAST of CsGy1G005910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08060.1	1.7e-45	66.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36391	FURRY	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G005910.2	CsGy1G005910.2	mRNA