CsGy1G005730 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G005730
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 3746634 .. 3747091 (-)
RNA-Seq ExpressionCsGy1G005730
SyntenyCsGy1G005730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATGGCGATGGTAATCGGGGCTCACATTCGGACCCAAATCACCCATATTCATCCCGAACCACAGCTTCGGTCCGATCCTCAGTTCTGTGCCCCAGTTCGTTGAAATTTTCGCACTCTTTCGATCACTTTATCTCTCTCTCTCTCTCTCTGAGCTCGGGGAGGCTCATATAGTCGTATCTCTCTCTCTCTCTCTCGCCCTCTCTCTGATTCAAACCCTAACACTTCACAATCCAGCATTATCAGAGGATCGCCTTCAAGTTCCATACGCAAGCTCATCAAATCAGTGTGAGTTCGTTGCCTCCTTCTTTTATCTTCAAAAACCCTAATTTTCCCCCCTTTCTGCGGGTCGTTTCTTTTAGGAAATACTTAATAGATGATTTACTGGTGGCGTCTTCTGGTCGGGCAGCTTGTTACACCTTGTTACTGTTGTTTTGCACCTTCTCCTTGAGTTAA

mRNA sequence

ATGGCGATGGCGATGGTAATCGGGGCTCACATTCGGACCCAAATCACCCATATTCATCCCGAACCACAGCTTCGGTCCGATCCTCAGTTCTGTGCCCCACATTATCAGAGGATCGCCTTCAAGTTCCATACGCAAGCTCATCAAATCAGTGTGAGTTCGTTGCCTCCTTCTTTTATCTTCAAAAACCCTAATTTTCCCCCCTTTCTGCGGGTCGTTTCTTTTAGGAAATACTTAATAGATGATTTACTGGTGGCGTCTTCTGGTCGGGCAGCTTGTTACACCTTGTTACTGTTGTTTTGCACCTTCTCCTTGAGTTAA

Coding sequence (CDS)

ATGGCGATGGCGATGGTAATCGGGGCTCACATTCGGACCCAAATCACCCATATTCATCCCGAACCACAGCTTCGGTCCGATCCTCAGTTCTGTGCCCCACATTATCAGAGGATCGCCTTCAAGTTCCATACGCAAGCTCATCAAATCAGTGTGAGTTCGTTGCCTCCTTCTTTTATCTTCAAAAACCCTAATTTTCCCCCCTTTCTGCGGGTCGTTTCTTTTAGGAAATACTTAATAGATGATTTACTGGTGGCGTCTTCTGGTCGGGCAGCTTGTTACACCTTGTTACTGTTGTTTTGCACCTTCTCCTTGAGTTAA

Protein sequence

MAMAMVIGAHIRTQITHIHPEPQLRSDPQFCAPHYQRIAFKFHTQAHQISVSSLPPSFIFKNPNFPPFLRVVSFRKYLIDDLLVASSGRAACYTLLLLFCTFSLS*
Homology
[Close]
BLAST of CsGy1G005730 vs. NCBI nr
Match: KGN64041.1 (hypothetical protein Csa_013264 [Cucumis sativus])

HSP 1 Score: 213 bits (542), Expect = 1.40e-69
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MAMAMVIGAHIRTQITHIHPEPQLRSDPQFCAPHYQRIAFKFHTQAHQISVSSLPPSFIF 60
           MAMAMVIGAHIRTQITHIHPEPQLRSDPQFCAPHYQRIAFKFHTQAHQISVSSLPPSFIF
Sbjct: 1   MAMAMVIGAHIRTQITHIHPEPQLRSDPQFCAPHYQRIAFKFHTQAHQISVSSLPPSFIF 60

Query: 61  KNPNFPPFLRVVSFRKYLIDDLLVASSGRAACYTLLLLFCTFSLS 105
           KNPNFPPFLRVVSFRKYLIDDLLVASSGRAACYTLLLLFCTFSLS
Sbjct: 61  KNPNFPPFLRVVSFRKYLIDDLLVASSGRAACYTLLLLFCTFSLS 105

[Close]
BLAST of CsGy1G005730 vs. NCBI nr
Match: KAG7037139.1 (hypothetical protein SDJN02_00761, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 55.1 bits (131), Expect = 1.31e-06
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 3  MAMVIGAHIRTQITHIHPEPQLRSDPQFCAP 33
          MAM IGA IRTQI HIHP P++RS+PQ CAP
Sbjct: 1  MAMAIGAQIRTQIIHIHPRPEVRSEPQLCAP 31

[Close]
BLAST of CsGy1G005730 vs. NCBI nr
Match: KAG7020004.1 (hypothetical protein SDJN02_18972, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 47.8 bits (112), Expect = 1.56e-04
Identity = 20/29 (68.97%), Postives = 24/29 (82.76%), Query Frame = 0 

Query: 5  MVIGAHIRTQITHIHPEPQLRSDPQFCAP 33
          +VIGA IRTQI +IHPE + RS+PQFC P
Sbjct: 47 VVIGAQIRTQINYIHPESEARSEPQFCDP 75

[Close]
BLAST of CsGy1G005730 vs. ExPASy TrEMBL
Match: A0A0A0LVL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039080 PE=4 SV=1)

HSP 1 Score: 213 bits (542), Expect = 6.79e-70
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MAMAMVIGAHIRTQITHIHPEPQLRSDPQFCAPHYQRIAFKFHTQAHQISVSSLPPSFIF 60
           MAMAMVIGAHIRTQITHIHPEPQLRSDPQFCAPHYQRIAFKFHTQAHQISVSSLPPSFIF
Sbjct: 1   MAMAMVIGAHIRTQITHIHPEPQLRSDPQFCAPHYQRIAFKFHTQAHQISVSSLPPSFIF 60

Query: 61  KNPNFPPFLRVVSFRKYLIDDLLVASSGRAACYTLLLLFCTFSLS 105
           KNPNFPPFLRVVSFRKYLIDDLLVASSGRAACYTLLLLFCTFSLS
Sbjct: 61  KNPNFPPFLRVVSFRKYLIDDLLVASSGRAACYTLLLLFCTFSLS 105

The following BLAST results are available for this feature:
BLAST of CsGy1G005730 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G005730 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64041.11.40e-69100.00hypothetical protein Csa_013264 [Cucumis sativus][more]
KAG7037139.11.31e-0674.19hypothetical protein SDJN02_00761, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG7020004.11.56e-0468.97hypothetical protein SDJN02_18972, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CsGy1G005730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVL36.79e-70100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039080 PE=4 SV=1[more]
BLAST of CsGy1G005730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G005730.2CsGy1G005730.2mRNA