CsGy1G005410 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATGTATCAAACAAGAAACATTGGACATCCTTTGATGAATCTTGTGAGGTTGAAAGGTTTTCCTATACTGCAGCAACTAAAATTGGAAGAGCGCCTACTTCGAAACTCATCAGATAATTGGTGTATCATAAATGATGGAACAGATAATCCAGCTATTGTGATGGGCGTTTCTGGGTACATACCTCAACATGTTGTTGTACTTCGAATTCTGTATTTTTCTTATGTTGTTATTTATTGGAAGACTTTATTTTTCTTTTTTCTCTGGATGGTTTGAGTTTTATGGCGCTCATAATGATGTAGTTAATTTCGAAATTATATGTCACAGTTTGATGACACATAAATGTATATTTAAAATTTTTGTCCAAATACTTCTAGTGAACCATTGAATTGTGCTGTAAGGTGAAACTGTCTTTATGAAGTCATTAAATCTGTCACTACAAATTGGAATAGCTTTACAATTTGATTGAGTTTCATTGTACATTTTGGTGTTCCCTCTCTAATTCTTTTTGTCAATTCACCTCTCTATGGCACACGAAGTTAGGTATCATTTTATTTGCTACTTTTCACCAAACCTTTGAAAAGTTTGCTTCTATAACCAAGAACCTCTTTTTACAAACTGTTTCTGGATACAGAAAAGTCTCTGTGTCATTTCCTTCTGGCTTATTGATCAGTTAGAGAGAAACCAATTGAACTTTTATTTAAATTGAGTATTGTTTTGATATGGATTAGTAACAACTTGATGACATAATAAGATCTGGCTAGCAATTTGGTTGGTTGTGTTTAGTCTTGAGTAGTGGACACTCCTAATTCAGGGTCATCTGAACTCTTCTTTCGTTTTTTCCTTTTGTTAATTCATTCCGAAGATTTTTGAATTGTGCCCAGGAAACCTGATGAGCTCCTTGACATCAAATCTGTGTTAGGAGATCAAATTCCAGTCATCAGAAGGTTCACTGGGGGTGGAACTGTTATTGTTGATCACAACACGGTCTTTGTCACCTTCATATGTAATAAAGATGCTGTTTCCGGACTGAAGCCATTTCCTCAACCTATCATGTCCTGGAGTAGTCTAGTATATAATAAAGTATTCCAAGGAACTGATTTTTATCTTCGAGAAAATGGTGGGTAGATTGTGCTGTTTAGAATAGTCGCCATTTCAACTTATTCATATGACTTCGTGTATATACAATTATATATAAGATTAAACGCTTGGACATTAACTTTTTGTTTTTCTTGGACTAAGATTATGTCTTTGGTAACCGCAAGTTTGGTGGCAATGCTCAGTCTATTACTAAAAGCCGGTGGATCCACCATACATCTTTTCTGTGGGACTACGAGGTTAGGAATATGGCATATCTGAAACATCCAAAACGGGTTCCTGATTACCGTGAGGTATATTGTACTGTTCCTTGCATTTTTCTTTCTGAACTTATTTCACGTTTCTCCCGCTTGTTTTTCCATGACCAAGCCTTACTACTACAATTCAAAATGCTACACTTTTGGGATCATTAAATTATTCCCTTTTTATTCTTATTGCTAATCGTATTATCTCTCTGTGATTTAGCAGTTCCTGGACAATTGCCGTATCTCTGTCTAGTGTCTCCTAAGCTCATTTTAAGGCTGCAATTAGTAATATCCACGTATTGGGTTTAGTGAAAAACATTTGGGACTCAATCTGAACGTTGAGTTAGCAGTTTTTTCCAACCAAAACTAGACCTAAGCTTGGTGATGCCTAGCCTAACCTGAACCATCTGATAGTTTCATTGGGTTGATTCAAATTGTTATGGCTATATATTTCAAGTTTGCGTGAAAGAATTTTTAAAAAATATTAGCACGGTGGCTAATTAGCGAGTCACACATTAGCTATGTGGCTGATTGTTCTGTGTGAATGGTCAGTAAGCTCACTTAGAGCAACATCGGTTGACAGCCATTATGTTGAAGATAGATTCTGTAGCGTCACTCCAAGGCTGTGGATATAGATATCTTAAAAACCTTGTTCAAACTCGAAATAGTGAAAATGATAGTATTTGGTGGACCATTTTCACTCCCTGAACCTGAATTGTATGTAATATATAGTTCAACATCCTATTTTAACTTGTGAAAAACAACGGTAATATCCTTGAGATTTGAACCAATTATTTTCTATAAGTTGTAAAGAGGATAAAGAATATAATGGAGTTATTTGGTAGCTGAAATGAATTGGTCTATTTATTGAGTAATATTCTACGGCCAAGGTATAAGGGTTTATAGAGAATGTAGTAAAGGGTTTATAGAGAATGAATTCAAATCATGGCTAGCACCCAACGGTTAGGCTATTATCTTGTGAGATAACAAATGTTATTGGTGCAGACTAAACTAATTTCAGAAGCAATCTAGCTTCATGATCTAGAAATTTGAAGTCTTTCTATAATTTCTTAGAGATCTCAAAAGAAGTTTGTAACCTAACGACTAATGATTTTGATTTGAGTTGTTTGGGTCCTTTGAACCATTATCCTTGTTACAATAGGTTGGAGGAAGTGGAAGACTAAAACACACGTTGACATGCATCACATACCATTTAGTTATAATATGATAATTGACATGGTTAATGTTGTTATCAATGCTGCTTTAGTAAATGAGTATGTATGGATGGAGTAACAGGTTGTTCAATATTGACAGAGATCCTTTTCAATGCATCATGTCGCTTTTTCTAAATTTTATCCCTACTTATTGGGAAACACAAAATTCTATCTAGTATTTTGCAACAAAATGCAAAATTCGAGCTTACTGACAAACATTTATACGTTTCAGGCAAGGAGCCATTTGGATTTTTTATGCAGCTTGAAGGAGTACATGCCAAGACAGGTATTTATTGACAAAACAATAGAAGCAATTGAAACTGAGTTTGCTACAAGTTCAAAGCAATTAGAAGAATGTGAGAATTCTTTGACTGGAAACTATAACCCCACAACAAGGATGTTGACAGAGCAAGAATTGGAAACGGCTGCAGGTTGTGTATCTCAAGATAGTGAGCTTGAGAAAGTTTCGGACATAGCATTATAA ATGGCGATGTATCAAACAAGAAACATTGGACATCCTTTGATGAATCTTGTGAGGTTGAAAGGTTTTCCTATACTGCAGCAACTAAAATTGGAAGAGCGCCTACTTCGAAACTCATCAGATAATTGGTGTATCATAAATGATGGAACAGATAATCCAGCTATTGTGATGGGCGTTTCTGGGAAACCTGATGAGCTCCTTGACATCAAATCTGTGTTAGGAGATCAAATTCCAGTCATCAGAAGGTTCACTGGGGGTGGAACTGTTATTGTTGATCACAACACGGTCTTTGTCACCTTCATATGTAATAAAGATGCTGTTTCCGGACTGAAGCCATTTCCTCAACCTATCATGTCCTGGAGTAGTCTAGTATATAATAAAGTATTCCAAGGAACTGATTTTTATCTTCGAGAAAATGATTATGTCTTTGGTAACCGCAAGTTTGGTGGCAATGCTCAGTCTATTACTAAAAGCCGGTGGATCCACCATACATCTTTTCTGTGGGACTACGAGGTTAGGAATATGGCATATCTGAAACATCCAAAACGGGTTCCTGATTACCGTGAGGCAAGGAGCCATTTGGATTTTTTATGCAGCTTGAAGGAGTACATGCCAAGACAGGTATTTATTGACAAAACAATAGAAGCAATTGAAACTGAGTTTGCTACAAGTTCAAAGCAATTAGAAGAATGTGAGAATTCTTTGACTGGAAACTATAACCCCACAACAAGGATGTTGACAGAGCAAGAATTGGAAACGGCTGCAGGTTGTGTATCTCAAGATAGTGAGCTTGAGAAAGTTTCGGACATAGCATTATAA ATGGCGATGTATCAAACAAGAAACATTGGACATCCTTTGATGAATCTTGTGAGGTTGAAAGGTTTTCCTATACTGCAGCAACTAAAATTGGAAGAGCGCCTACTTCGAAACTCATCAGATAATTGGTGTATCATAAATGATGGAACAGATAATCCAGCTATTGTGATGGGCGTTTCTGGGAAACCTGATGAGCTCCTTGACATCAAATCTGTGTTAGGAGATCAAATTCCAGTCATCAGAAGGTTCACTGGGGGTGGAACTGTTATTGTTGATCACAACACGGTCTTTGTCACCTTCATATGTAATAAAGATGCTGTTTCCGGACTGAAGCCATTTCCTCAACCTATCATGTCCTGGAGTAGTCTAGTATATAATAAAGTATTCCAAGGAACTGATTTTTATCTTCGAGAAAATGATTATGTCTTTGGTAACCGCAAGTTTGGTGGCAATGCTCAGTCTATTACTAAAAGCCGGTGGATCCACCATACATCTTTTCTGTGGGACTACGAGGTTAGGAATATGGCATATCTGAAACATCCAAAACGGGTTCCTGATTACCGTGAGGCAAGGAGCCATTTGGATTTTTTATGCAGCTTGAAGGAGTACATGCCAAGACAGGTATTTATTGACAAAACAATAGAAGCAATTGAAACTGAGTTTGCTACAAGTTCAAAGCAATTAGAAGAATGTGAGAATTCTTTGACTGGAAACTATAACCCCACAACAAGGATGTTGACAGAGCAAGAATTGGAAACGGCTGCAGGTTGTGTATCTCAAGATAGTGAGCTTGAGAAAGTTTCGGACATAGCATTATAA MAMYQTRNIGHPLMNLVRLKGFPILQQLKLEERLLRNSSDNWCIINDGTDNPAIVMGVSGKPDELLDIKSVLGDQIPVIRRFTGGGTVIVDHNTVFVTFICNKDAVSGLKPFPQPIMSWSSLVYNKVFQGTDFYLRENDYVFGNRKFGGNAQSITKSRWIHHTSFLWDYEVRNMAYLKHPKRVPDYREARSHLDFLCSLKEYMPRQVFIDKTIEAIETEFATSSKQLEECENSLTGNYNPTTRMLTEQELETAAGCVSQDSELEKVSDIAL* Homology
BLAST of CsGy1G005410 vs. ExPASy Swiss-Prot
Match: O13629 (Putative lipoate-protein ligase A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=aim22 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07 Identity = 41/155 (26.45%), Postives = 80/155 (51.61%), Query Frame = 0
BLAST of CsGy1G005410 vs. ExPASy Swiss-Prot
Match: O07608 (Lipoate-protein ligase LplJ OS=Bacillus subtilis (strain 168) OX=224308 GN=lplJ PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.0e-07 Identity = 52/207 (25.12%), Postives = 88/207 (42.51%), Query Frame = 0
BLAST of CsGy1G005410 vs. ExPASy Swiss-Prot
Match: P47512 (Probable lipoate-protein ligase A OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) OX=243273 GN=lplA PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06 Identity = 53/202 (26.24%), Postives = 85/202 (42.08%), Query Frame = 0
BLAST of CsGy1G005410 vs. ExPASy Swiss-Prot
Match: A0A0H3JR16 (Lipoate--protein ligase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV1028 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05 Identity = 44/169 (26.04%), Postives = 68/169 (40.24%), Query Frame = 0
BLAST of CsGy1G005410 vs. ExPASy Swiss-Prot
Match: A6ZPT1 (Putative lipoate-protein ligase A OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=AIM22 PE=3 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 1.4e-04 Identity = 47/203 (23.15%), Postives = 85/203 (41.87%), Query Frame = 0
BLAST of CsGy1G005410 vs. NCBI nr
Match: XP_004137412.1 (putative lipoate-protein ligase A [Cucumis sativus] >XP_011649831.1 putative lipoate-protein ligase A [Cucumis sativus] >KGN64009.1 hypothetical protein Csa_013779 [Cucumis sativus]) HSP 1 Score: 552 bits (1422), Expect = 2.70e-198 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of CsGy1G005410 vs. NCBI nr
Match: XP_008443042.1 (PREDICTED: lipoate-protein ligase LplJ [Cucumis melo] >XP_008443165.1 PREDICTED: lipoate-protein ligase LplJ [Cucumis melo]) HSP 1 Score: 533 bits (1372), Expect = 1.14e-190 Identity = 260/271 (95.94%), Postives = 264/271 (97.42%), Query Frame = 0
BLAST of CsGy1G005410 vs. NCBI nr
Match: KAA0036090.1 (lipoate-protein ligase LplJ [Cucumis melo var. makuwa] >TYJ98898.1 lipoate-protein ligase LplJ [Cucumis melo var. makuwa]) HSP 1 Score: 533 bits (1372), Expect = 4.43e-190 Identity = 260/271 (95.94%), Postives = 264/271 (97.42%), Query Frame = 0
BLAST of CsGy1G005410 vs. NCBI nr
Match: XP_038895232.1 (lipoate-protein ligase LplJ isoform X1 [Benincasa hispida] >XP_038895233.1 lipoate-protein ligase LplJ isoform X1 [Benincasa hispida]) HSP 1 Score: 507 bits (1306), Expect = 1.26e-180 Identity = 246/271 (90.77%), Postives = 262/271 (96.68%), Query Frame = 0
BLAST of CsGy1G005410 vs. NCBI nr
Match: XP_023525841.1 (uncharacterized protein LOC111789340 [Cucurbita pepo subsp. pepo] >XP_023525843.1 uncharacterized protein LOC111789340 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 504 bits (1299), Expect = 1.52e-179 Identity = 244/271 (90.04%), Postives = 260/271 (95.94%), Query Frame = 0
BLAST of CsGy1G005410 vs. ExPASy TrEMBL
Match: A0A0A0LSR7 (BPL/LPL catalytic domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G033280 PE=4 SV=1) HSP 1 Score: 552 bits (1422), Expect = 1.31e-198 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of CsGy1G005410 vs. ExPASy TrEMBL
Match: A0A1S3B7D4 (lipoate-protein ligase LplJ OS=Cucumis melo OX=3656 GN=LOC103486730 PE=4 SV=1) HSP 1 Score: 533 bits (1372), Expect = 5.50e-191 Identity = 260/271 (95.94%), Postives = 264/271 (97.42%), Query Frame = 0
BLAST of CsGy1G005410 vs. ExPASy TrEMBL
Match: A0A5A7SYE8 (Lipoate-protein ligase LplJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00950 PE=4 SV=1) HSP 1 Score: 533 bits (1372), Expect = 2.14e-190 Identity = 260/271 (95.94%), Postives = 264/271 (97.42%), Query Frame = 0
BLAST of CsGy1G005410 vs. ExPASy TrEMBL
Match: A0A6J1GC58 (uncharacterized protein LOC111452820 OS=Cucurbita moschata OX=3662 GN=LOC111452820 PE=4 SV=1) HSP 1 Score: 501 bits (1291), Expect = 1.22e-178 Identity = 243/271 (89.67%), Postives = 259/271 (95.57%), Query Frame = 0
BLAST of CsGy1G005410 vs. ExPASy TrEMBL
Match: A0A6J1K8Z4 (uncharacterized protein LOC111493356 OS=Cucurbita maxima OX=3661 GN=LOC111493356 PE=4 SV=1) HSP 1 Score: 493 bits (1268), Expect = 3.92e-175 Identity = 239/271 (88.19%), Postives = 255/271 (94.10%), Query Frame = 0
BLAST of CsGy1G005410 vs. TAIR 10
Match: AT3G29010.1 (Biotin/lipoate A/B protein ligase family ) HSP 1 Score: 329.7 bits (844), Expect = 2.2e-90 Identity = 153/262 (58.40%), Postives = 203/262 (77.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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