CsGy1G005405 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G005405
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 3586343 .. 3587181 (+)
RNA-Seq ExpressionCsGy1G005405
SyntenyCsGy1G005405
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATTAGGGCACAAGAATCTCCTCTCCTACATTTTGTTCTTCATTTTCTTTTTGGAGAATCATCGATTCCATTGTTTTATTGATTTTTGGCTCTCCCGCCCTATTTCTGCACCGGGAGATCCTTCTCAGGTTTTCCCATCTGCATTCCACCGGTTCCTTAACTAATTGTTTTCTGTAAAGCTACTCGTTTTCTCAGAAATAGATTAATCTTCTTGCTTGATCATCAAATTCGATTTGTGGAAATGTATATTTCTCTCTGTTAATTGATCGGGTCTGGTTAATTTATGGAAGGGATCTGTCCTTCCTGATTGCTGGGAGTTATTTTTTTAGTATGATGATGTGACTACAACAAACTCAATCTGCTCTTGTTGTAAGATTTAATTTTCAAATTTCTTCAATCCTTCCTTTGTCTTGTAATTCTTATTGGGTGTTTTTTTCTTTTGGCGAGTTATTCAAGCGAGTTTCACTTATTGTATTATCATTTTTTCCTTTTTGTTTTTGTTCATGAACACTGTATTTCTCCACTGTCATTGTTTCTGAAGCAATTTGCATGTTTTGGTTACTTTGACTCTCTGGGTGTTACAAAGTTTGCCTCGTTATATTACATTGTCCATTGTTTTATATCATTCCATCCGTGCCTTGTAGTATCTCGGAGACGGCTGATATTCATCTCCATTCTAACTGTTTCCTTGATGTTAGAATCATATTCGTTTTTATTTTTATTTTTGAAGCATGACGTGAAAGTGATAATAATGCTTCTTTGTGGTGCAGGGAGTTATTTCAACTTAATTGAAGTCAACTTCTTTTTCGGAAGTAGGAGAAGAAAAGGGAGCTGA

mRNA sequence

ATGCAATTAGGGCACAAGAATCTCCTCTCCTACATTTTGTTCTTCATTTTCTTTTTGGAGAATCATCGATTCCATTGTTTTATTGATTTTTGGCTCTCCCGCCCTATTTCTGCACCGGGAGATCCTTCTCAGTATGATGATGTGACTACAACAAACTCAATCTGCTCTTGTTGGAGTTATTTCAACTTAATTGAAGTCAACTTCTTTTTCGGAAGTAGGAGAAGAAAAGGGAGCTGA

Coding sequence (CDS)

ATGCAATTAGGGCACAAGAATCTCCTCTCCTACATTTTGTTCTTCATTTTCTTTTTGGAGAATCATCGATTCCATTGTTTTATTGATTTTTGGCTCTCCCGCCCTATTTCTGCACCGGGAGATCCTTCTCAGTATGATGATGTGACTACAACAAACTCAATCTGCTCTTGTTGGAGTTATTTCAACTTAATTGAAGTCAACTTCTTTTTCGGAAGTAGGAGAAGAAAAGGGAGCTGA

Protein sequence

MQLGHKNLLSYILFFIFFLENHRFHCFIDFWLSRPISAPGDPSQYDDVTTTNSICSCWSYFNLIEVNFFFGSRRRKGS*
Homology
[Close]
BLAST of CsGy1G005405 vs. NCBI nr
Match: KGN64008.1 (hypothetical protein Csa_014375 [Cucumis sativus])

HSP 1 Score: 170 bits (431), Expect = 1.72e-53
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MQLGHKNLLSYILFFIFFLENHRFHCFIDFWLSRPISAPGDPSQYDDVTTTNSICSCWSY 60
          MQLGHKNLLSYILFFIFFLENHRFHCFIDFWLSRPISAPGDPSQYDDVTTTNSICSCWSY
Sbjct: 1  MQLGHKNLLSYILFFIFFLENHRFHCFIDFWLSRPISAPGDPSQYDDVTTTNSICSCWSY 60

Query: 61 FNLIEVNFFFGSRRRKGS 78
          FNLIEVNFFFGSRRRKGS
Sbjct: 61 FNLIEVNFFFGSRRRKGS 78

[Close]
BLAST of CsGy1G005405 vs. ExPASy TrEMBL
Match: A0A0A0LQI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033270 PE=4 SV=1)

HSP 1 Score: 170 bits (431), Expect = 8.31e-54
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MQLGHKNLLSYILFFIFFLENHRFHCFIDFWLSRPISAPGDPSQYDDVTTTNSICSCWSY 60
          MQLGHKNLLSYILFFIFFLENHRFHCFIDFWLSRPISAPGDPSQYDDVTTTNSICSCWSY
Sbjct: 1  MQLGHKNLLSYILFFIFFLENHRFHCFIDFWLSRPISAPGDPSQYDDVTTTNSICSCWSY 60

Query: 61 FNLIEVNFFFGSRRRKGS 78
          FNLIEVNFFFGSRRRKGS
Sbjct: 61 FNLIEVNFFFGSRRRKGS 78

The following BLAST results are available for this feature:
BLAST of CsGy1G005405 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G005405 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64008.11.72e-53100.00hypothetical protein Csa_014375 [Cucumis sativus][more]
BLAST of CsGy1G005405 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQI48.31e-54100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033270 PE=4 SV=1[more]
BLAST of CsGy1G005405 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G005405.1CsGy1G005405.1mRNA